AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0765320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0765320 MtrunA17_Chr5g0416341 90.129 466 17 3 1 437 1 466 0.0 856
Msa0765320 MtrunA17_Chr8g0362231 49.682 471 156 18 6 434 1 432 3.12e-130 382
Msa0765320 MtrunA17_Chr7g0238631 36.970 165 64 4 29 154 116 279 2.53e-17 84.3
Msa0765320 MtrunA17_Chr3g0139671 31.507 146 72 4 29 151 88 228 4.90e-14 74.3
Msa0765320 MtrunA17_Chr7g0228401 48.485 66 34 0 37 102 309 374 6.52e-14 73.6
Msa0765320 MtrunA17_Chr1g0157731 34.694 98 45 1 29 107 94 191 1.57e-13 72.8
Msa0765320 MtrunA17_Chr2g0309911 32.500 120 61 1 29 128 16 135 1.70e-13 71.2
Msa0765320 MtrunA17_Chr1g0168661 32.593 135 65 3 6 118 7 137 1.73e-13 70.1
Msa0765320 MtrunA17_Chr6g0450101 35.135 111 52 1 29 119 19 129 2.41e-13 68.9
Msa0765320 MtrunA17_Chr7g0228231 36.634 101 44 1 29 109 19 119 2.46e-13 68.9
Msa0765320 MtrunA17_Chr4g0055981 40.385 104 41 2 29 111 60 163 3.04e-13 68.9
Msa0765320 MtrunA17_Chr1g0167661 34.711 121 54 3 29 129 17 132 3.34e-13 69.3
Msa0765320 MtrunA17_Chr3g0088461 38.776 98 55 2 17 109 30 127 6.55e-13 69.7
Msa0765320 MtrunA17_Chr8g0349261 38.000 100 41 2 29 107 18 117 6.59e-13 68.9
Msa0765320 MtrunA17_Chr3g0117511 37.719 114 49 3 17 110 173 284 1.31e-12 69.3
Msa0765320 MtrunA17_Chr1g0209661 34.653 101 46 1 29 109 32 132 1.49e-12 68.2
Msa0765320 MtrunA17_Chr4g0070641 36.275 102 45 1 28 109 16 117 1.72e-12 65.5
Msa0765320 MtrunA17_Chr1g0177901 51.786 56 27 0 47 102 34 89 1.80e-12 66.2
Msa0765320 MtrunA17_Chr1g0193801 35.398 113 66 2 8 113 9 121 1.85e-12 68.6
Msa0765320 MtrunA17_Chr4g0070611 36.634 101 44 1 29 109 17 117 2.55e-12 67.4
Msa0765320 MtrunA17_Chr2g0330041 48.333 60 31 0 48 107 56 115 2.56e-12 68.2
Msa0765320 MtrunA17_Chr5g0429661 34.127 126 76 3 13 133 124 247 3.31e-12 67.4
Msa0765320 MtrunA17_Chr4g0058991 35.398 113 49 3 20 110 200 310 3.37e-12 68.2
Msa0765320 MtrunA17_Chr7g0228531 36.290 124 55 5 8 109 199 320 3.51e-12 67.8
Msa0765320 MtrunA17_Chr1g0194291 36.634 101 44 1 29 109 26 126 3.55e-12 66.6
Msa0765320 MtrunA17_Chr7g0247131 46.774 62 33 0 48 109 22 83 3.78e-12 66.6
Msa0765320 MtrunA17_Chr7g0233061 44.118 68 38 0 35 102 206 273 4.02e-12 67.4
Msa0765320 MtrunA17_Chr1g0193371 32.381 105 51 1 29 113 17 121 5.82e-12 67.0
Msa0765320 MtrunA17_Chr5g0397841 34.783 92 41 1 28 100 112 203 6.72e-12 67.4
Msa0765320 MtrunA17_Chr1g0152011 32.168 143 66 3 29 140 17 159 7.27e-12 66.2
Msa0765320 MtrunA17_Chr4g0048511 36.364 99 43 1 29 107 18 116 8.24e-12 66.2
Msa0765320 MtrunA17_Chr8g0343831 34.862 109 50 2 22 109 6 114 1.17e-11 64.7
Msa0765320 MtrunA17_Chr3g0099131 33.663 101 47 1 29 109 46 146 1.19e-11 66.6
Msa0765320 MtrunA17_Chr7g0275911 34.286 105 49 1 25 109 13 117 1.50e-11 64.3
Msa0765320 MtrunA17_Chr8g0342541 37.383 107 60 2 8 107 9 115 1.61e-11 65.5
Msa0765320 MtrunA17_Chr4g0044421 27.778 162 85 3 28 158 16 176 2.03e-11 62.8
Msa0765320 MtrunA17_Chr1g0203411 29.530 149 76 3 23 142 8 156 2.13e-11 64.7
Msa0765320 MtrunA17_Chr5g0395281 25.352 284 138 9 29 252 17 286 2.23e-11 64.7
Msa0765320 MtrunA17_Chr8g0342481 35.000 100 44 1 29 107 17 116 2.23e-11 65.5
Msa0765320 MtrunA17_Chr3g0103281 36.364 99 43 1 29 107 17 115 2.58e-11 64.7
Msa0765320 MtrunA17_Chr3g0135311 35.000 100 44 1 29 107 17 116 2.70e-11 64.7
Msa0765320 MtrunA17_Chr7g0261281 30.519 154 83 3 29 159 17 169 3.10e-11 63.9
Msa0765320 MtrunA17_Chr5g0410961 34.343 99 45 1 29 107 17 115 3.12e-11 64.7
Msa0765320 MtrunA17_Chr4g0068061 33.333 99 46 1 29 107 17 115 3.54e-11 64.3
Msa0765320 MtrunA17_Chr8g0342521 45.000 60 33 0 48 107 56 115 3.56e-11 64.3
Msa0765320 MtrunA17_Chr3g0131121 28.261 138 77 2 29 146 17 152 3.93e-11 63.9
Msa0765320 MtrunA17_Chr2g0327821 32.673 101 48 1 29 109 11 111 3.94e-11 62.8
Msa0765320 MtrunA17_Chr7g0270891 31.429 105 52 1 29 113 17 121 3.99e-11 64.3
Msa0765320 MtrunA17_Chr4g0032401 39.726 73 44 0 48 120 61 133 4.03e-11 63.9
Msa0765320 MtrunA17_Chr2g0323411 34.343 99 45 1 29 107 17 115 5.48e-11 63.5
Msa0765320 MtrunA17_Chr2g0281071 36.364 99 43 1 29 107 18 116 6.36e-11 63.5
Msa0765320 MtrunA17_Chr4g0037141 33.333 99 46 1 29 107 17 115 7.25e-11 62.8
Msa0765320 MtrunA17_Chr1g0151941 33.000 100 46 1 29 107 17 116 7.72e-11 62.4
Msa0765320 MtrunA17_Chr1g0186061 33.663 101 47 1 29 109 25 125 8.09e-11 62.4
Msa0765320 MtrunA17_Chr7g0228481 35.965 114 50 4 11 102 202 314 8.45e-11 63.5
Msa0765320 MtrunA17_Chr1g0167691 35.354 99 44 1 29 107 17 115 8.60e-11 62.4
Msa0765320 MtrunA17_Chr8g0354661 28.261 138 65 3 6 109 5 142 9.36e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0765320 AT2G02820.2 51.440 486 178 11 2 437 6 483 4.17e-150 435
Msa0765320 AT1G14350.2 50.993 453 157 10 17 437 16 435 2.00e-143 417
Msa0765320 AT1G14350.1 50.993 453 157 10 17 437 16 435 2.00e-143 417
Msa0765320 AT2G02820.1 49.667 451 169 11 2 402 6 448 1.14e-129 382
Msa0765320 AT1G14350.3 51.365 403 150 9 48 437 23 392 7.57e-128 375
Msa0765320 AT1G14350.4 51.365 403 150 9 48 437 23 392 7.57e-128 375
Msa0765320 AT2G02820.3 54.711 329 110 6 2 292 6 333 8.61e-113 335
Msa0765320 AT3G27785.1 33.333 141 72 3 7 126 168 307 4.88e-15 77.4
Msa0765320 AT5G02320.1 36.634 101 45 1 29 110 130 230 1.36e-14 76.3
Msa0765320 AT5G02320.2 36.634 101 45 1 29 110 130 230 1.36e-14 76.3
Msa0765320 AT5G02320.3 36.634 101 45 1 29 110 70 170 1.88e-14 75.5
Msa0765320 AT3G09370.2 42.857 77 44 0 37 113 165 241 2.39e-14 75.5
Msa0765320 AT3G09370.1 42.857 77 44 0 37 113 160 236 2.47e-14 75.5
Msa0765320 AT3G09370.3 29.143 175 92 4 37 181 173 345 3.48e-14 74.7
Msa0765320 AT5G11510.3 34.694 98 45 1 29 107 84 181 2.94e-13 72.4
Msa0765320 AT5G11510.1 34.694 98 45 1 29 107 84 181 2.94e-13 72.4
Msa0765320 AT5G11510.4 34.694 98 45 1 29 107 84 181 2.94e-13 72.4
Msa0765320 AT5G11510.2 34.694 98 45 1 29 107 84 181 3.33e-13 72.4
Msa0765320 AT5G11510.5 34.694 98 45 1 29 107 84 181 3.34e-13 72.4
Msa0765320 AT5G58850.1 30.323 155 74 3 3 133 92 236 5.10e-13 70.9
Msa0765320 AT5G35550.1 29.651 172 89 4 20 169 10 171 6.09e-13 68.9
Msa0765320 AT1G09540.1 34.286 105 49 1 29 113 17 121 6.16e-13 70.5
Msa0765320 AT5G11050.1 31.757 148 94 2 37 184 135 275 6.40e-13 70.5
Msa0765320 AT3G27920.1 34.426 122 55 2 6 107 1 117 6.45e-13 68.6
Msa0765320 AT2G47190.1 33.333 102 48 1 29 110 25 126 1.24e-12 68.6
Msa0765320 AT3G13890.2 36.364 99 43 1 29 107 17 115 2.29e-12 68.6
Msa0765320 AT1G25340.2 33.945 109 55 2 16 109 12 118 2.62e-12 67.4
Msa0765320 AT4G13480.1 34.653 101 46 1 29 109 11 111 2.67e-12 67.4
Msa0765320 AT5G40360.1 40.845 71 42 0 36 106 187 257 2.84e-12 68.2
Msa0765320 AT3G24310.1 34.653 101 46 1 29 109 23 123 2.96e-12 67.4
Msa0765320 AT1G25340.3 35.417 96 47 1 29 109 23 118 3.13e-12 67.8
Msa0765320 AT5G14750.1 36.036 111 50 2 29 118 21 131 3.15e-12 65.9
Msa0765320 AT3G13890.1 40.476 84 49 1 24 107 42 124 4.19e-12 67.8
Msa0765320 AT2G25230.1 31.250 128 68 2 1 109 1 127 4.27e-12 66.2
Msa0765320 AT4G18770.1 36.190 105 53 2 13 110 230 327 4.48e-12 68.2
Msa0765320 AT3G27810.1 35.644 101 45 1 29 109 25 125 4.55e-12 65.9
Msa0765320 AT5G12870.1 32.727 110 69 1 5 109 14 123 4.93e-12 66.6
Msa0765320 AT4G32730.5 31.633 98 48 1 29 107 90 187 5.62e-12 68.6
Msa0765320 AT4G32730.4 31.633 98 48 1 29 107 90 187 5.62e-12 68.6
Msa0765320 AT4G32730.3 31.633 98 48 1 29 107 90 187 5.62e-12 68.6
Msa0765320 AT4G32730.2 31.633 98 48 1 29 107 90 187 5.62e-12 68.6
Msa0765320 AT4G37780.1 30.496 141 67 3 29 138 17 157 5.91e-12 66.6
Msa0765320 AT4G32730.1 31.633 98 48 1 29 107 90 187 6.02e-12 68.2
Msa0765320 AT4G05100.1 37.374 99 42 1 29 107 18 116 6.86e-12 66.6
Msa0765320 AT5G16770.4 34.343 99 45 1 29 107 17 115 9.52e-12 66.2
Msa0765320 AT5G16770.3 34.343 99 45 1 29 107 17 115 9.52e-12 66.2
Msa0765320 AT1G25340.1 32.456 114 55 2 16 109 12 123 1.27e-11 65.5
Msa0765320 AT4G00540.2 42.254 71 41 0 37 107 136 206 1.27e-11 66.6
Msa0765320 AT5G16770.1 34.343 99 45 1 29 107 17 115 1.28e-11 66.2
Msa0765320 AT5G16770.2 34.343 99 45 1 29 107 17 115 1.28e-11 66.2
Msa0765320 AT4G28110.1 35.354 99 44 1 29 107 17 115 1.46e-11 65.5
Msa0765320 AT5G40330.1 32.743 113 56 1 15 107 3 115 1.46e-11 64.3
Msa0765320 AT1G06180.1 33.333 102 48 1 29 110 17 118 1.48e-11 64.7
Msa0765320 AT4G00540.1 42.254 71 41 0 37 107 134 204 1.76e-11 66.2
Msa0765320 AT5G40350.1 35.714 98 43 1 29 106 22 119 1.77e-11 63.9
Msa0765320 AT3G12720.1 31.429 105 52 1 29 113 27 131 1.87e-11 65.5
Msa0765320 AT1G57560.2 34.343 99 45 1 29 107 17 115 2.00e-11 64.7
Msa0765320 AT3G08500.1 37.755 98 56 2 17 109 38 135 2.08e-11 65.5
Msa0765320 AT1G68320.1 33.333 102 46 2 29 109 24 124 2.11e-11 64.7
Msa0765320 AT5G52600.1 32.117 137 66 3 29 144 17 147 2.53e-11 63.2
Msa0765320 AT1G57560.1 34.343 99 45 1 29 107 17 115 2.60e-11 65.1
Msa0765320 AT5G60890.1 35.238 105 48 1 29 113 17 121 2.78e-11 64.7
Msa0765320 AT1G22640.1 34.000 100 46 1 28 107 16 115 3.43e-11 63.9
Msa0765320 AT5G26660.2 36.585 82 47 1 37 113 9 90 3.66e-11 64.7
Msa0765320 AT1G63910.1 33.673 98 60 1 17 109 20 117 3.94e-11 64.7
Msa0765320 AT5G06100.1 33.663 101 47 1 29 109 37 137 5.13e-11 64.7
Msa0765320 AT3G30210.1 32.673 101 48 1 29 109 32 132 6.13e-11 63.5
Msa0765320 AT3G61250.1 35.354 99 44 1 29 107 17 115 7.00e-11 63.5
Msa0765320 AT5G06100.5 33.663 101 47 1 29 109 37 137 7.13e-11 64.7
Msa0765320 AT5G06100.2 33.663 101 47 1 29 109 37 137 7.13e-11 64.7
Msa0765320 AT5G06100.3 33.663 101 47 1 29 109 37 137 7.13e-11 64.7
Msa0765320 AT5G06100.4 33.663 101 47 1 29 109 37 137 7.13e-11 64.7
Msa0765320 AT1G34670.1 35.354 99 44 1 29 107 17 115 7.97e-11 63.9
Msa0765320 AT5G26660.1 31.429 105 52 1 29 113 17 121 8.95e-11 63.5
Msa0765320 AT2G31180.1 34.343 99 45 1 29 107 17 115 9.73e-11 62.4

Find 139 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGAAACATAATTATAAT+TGG 0.197129 5_2:-26006545 Msa0765320:three_prime_UTR
GTATAATTCTTCAAACAAAA+AGG 0.197907 5_2:-26006427 Msa0765320:three_prime_UTR
TGTAGATCTTAAAGATTTAT+TGG 0.201943 5_2:-26009278 Msa0765320:CDS
TGATTAATGTTTATTCTATA+TGG 0.219729 5_2:+26012261 None:intergenic
TCAAGGAACATTCCTTAAAA+AGG 0.230573 5_2:-26009624 Msa0765320:CDS
GAAAGGTGGAAAATAGAAAA+AGG 0.234747 5_2:+26012683 None:intergenic
GTACTGTGTTCAGAACTTTC+TGG 0.245139 5_2:+26009102 None:intergenic
ATTGGAGTGGAAATGCATTT+TGG 0.251975 5_2:-26006527 Msa0765320:three_prime_UTR
ATTGAACATCAAAAGGAAAT+TGG 0.257602 5_2:-26008991 Msa0765320:CDS
ATTCTGGTCTGGCAAGTTAT+TGG 0.262144 5_2:+26010274 None:intergenic
GAAATAGCAAAGGTGGTTTC+AGG 0.291223 5_2:-26010676 Msa0765320:CDS
TGCATCAACGCATTTATCTT+TGG 0.299472 5_2:+26009596 None:intergenic
AACAAAGAATCAGATGTTTC+TGG 0.302307 5_2:-26009325 Msa0765320:CDS
TTCCACCTTTCATGTGATAT+TGG 0.313934 5_2:-26012671 Msa0765320:five_prime_UTR
AAGCTATTATTCAATGGCTT+TGG 0.319440 5_2:+26012552 None:intergenic
GGTTGTGAGGGGTTGGCGAT+TGG 0.323030 5_2:+26007166 None:intergenic
GTGCTTAGAGTGTCATTCTT+TGG 0.328745 5_2:-26006860 Msa0765320:three_prime_UTR
GAGAAACAACATCTGCATTC+TGG 0.329398 5_2:+26006495 None:intergenic
TCACATTGCAGACATGATTC+TGG 0.334189 5_2:+26010258 None:intergenic
TATTTATCATATTATTATAA+AGG 0.339947 5_2:-26012363 Msa0765320:five_prime_UTR
GAATGGAATTTATGCTATTA+CGG 0.350599 5_2:-26012508 Msa0765320:five_prime_UTR
TTTATTCTATATGGTTTGTT+TGG 0.359264 5_2:+26012270 None:intergenic
AATGTTTAGTGTTCTTATTA+AGG 0.359915 5_2:+26012646 None:intergenic
TTATACAGAATATAGATAAA+TGG 0.360378 5_2:+26006444 None:intergenic
GATATATTGAGGGATCAAAT+TGG 0.361207 5_2:-26011968 Msa0765320:CDS
TAGCATGCAACTTGGCTCCT+TGG 0.362424 5_2:-26012325 Msa0765320:five_prime_UTR
AGGGGTTGGCGATTGGGTTG+AGG 0.363205 5_2:+26007173 None:intergenic
TATTATAAAGGAAGAGTGTT+TGG 0.366516 5_2:-26012351 Msa0765320:five_prime_UTR
TCCGATCCAGCATTTGGTAT+TGG 0.367075 5_2:-26006801 Msa0765320:three_prime_UTR
GTTGTGAGGGGTTGGCGATT+GGG 0.369429 5_2:+26007167 None:intergenic
CTGAATGTATAATAGGTATA+TGG 0.370286 5_2:-26009142 Msa0765320:intron
TACCCCTCCTTTAGAATGTT+AGG 0.370560 5_2:-26006972 Msa0765320:three_prime_UTR
GGGGTTGGCGATTGGGTTGA+GGG 0.376843 5_2:+26007174 None:intergenic
AAACATCTGATTCTTTGTTT+CGG 0.379322 5_2:+26009329 None:intergenic
TTGAATTCTGATTTCAAGAA+AGG 0.380640 5_2:-26011402 Msa0765320:CDS
TATGGATTAAACTTGATAAG+AGG 0.390802 5_2:+26006373 None:intergenic
TGCACACTCAACAAACAAAT+AGG 0.392056 5_2:+26006612 None:intergenic
CGTGTTCGTTCTTCTCATCC+TGG 0.392092 5_2:-26007041 Msa0765320:three_prime_UTR
AGATCTACAAGCTGTAAATC+TGG 0.392496 5_2:+26009292 None:intergenic
CTCTCTAACTTTATTGAAAA+CGG 0.395931 5_2:+26012858 None:intergenic
TGTTTCTCTTCTATCTAACT+TGG 0.398934 5_2:-26006480 Msa0765320:three_prime_UTR
TATAGTGGTATGATATTGAT+AGG 0.408791 5_2:-26013052 None:intergenic
ATTCATATTAACTTTGTAGC+AGG 0.408846 5_2:+26007125 None:intergenic
CTTTCTGAAAATTGTGGACT+AGG 0.438291 5_2:+26008137 None:intergenic
TTGGCGATTGGGTTGAGGGA+TGG 0.440478 5_2:+26007178 None:intergenic
TGAATGAAAGAGAAAGAAGA+AGG 0.451495 5_2:-26012435 Msa0765320:five_prime_UTR
AGGGATCAAATTGGAATCCA+TGG 0.454152 5_2:-26011959 Msa0765320:CDS
CACTCACTGCATCAAGATAG+TGG 0.456480 5_2:-26009036 Msa0765320:CDS
TCATGAAAGGTAATATTCCT+AGG 0.457448 5_2:+26006903 None:intergenic
TTTGAGCTAAAACTGCCAAT+GGG 0.459457 5_2:+26010309 None:intergenic
CAGCTAAGGATCTGAACATA+GGG 0.469480 5_2:+26008168 None:intergenic
AATGTGAAGTTTAGTGATTA+TGG 0.469742 5_2:-26010242 Msa0765320:intron
CTTACACTTTCTGAAAATTG+TGG 0.471445 5_2:+26008131 None:intergenic
GCTCAAAACAACAAGATTCA+AGG 0.472074 5_2:-26009641 Msa0765320:CDS
TATACAAATTGAACATCAAA+AGG 0.474286 5_2:-26008998 Msa0765320:CDS
TTGCAATGTGGCGGTTGTGA+GGG 0.474581 5_2:+26007154 None:intergenic
GACACTGTTAAATATGTTGA+AGG 0.476366 5_2:+26006936 None:intergenic
TGCAGGAGGATGATATATTG+AGG 0.481794 5_2:-26011979 Msa0765320:intron
TTCATTATATGTAGTACGAT+TGG 0.482214 5_2:+26006703 None:intergenic
CCTGATGAAAACACTTGGAA+TGG 0.486454 5_2:-26007206 Msa0765320:CDS
ATGGATTAAACTTGATAAGA+GGG 0.492535 5_2:+26006374 None:intergenic
AACAAACCAATACCAAATGC+TGG 0.493171 5_2:+26006795 None:intergenic
ACACGAATTCAAATAACAAA+AGG 0.494406 5_2:-26010463 Msa0765320:CDS
AGCTAGCGAAGTTAGTAGCT+CGG 0.501640 5_2:+26009568 None:intergenic
GATGGTCGCGGTGAGGAGAA+AGG 0.509060 5_2:+26007067 None:intergenic
CATAAGAGCATATCTTCCTC+TGG 0.509365 5_2:+26011369 None:intergenic
TTGCAGACATGATTCTGGTC+TGG 0.510397 5_2:+26010263 None:intergenic
TTCATATTAACTTTGTAGCA+GGG 0.525473 5_2:+26007126 None:intergenic
ACTACTATGCCTCATTGTCC+TGG 0.525806 5_2:-26009072 Msa0765320:CDS
TGAAACTTCAAGAGCCCCAT+TGG 0.526537 5_2:-26010324 Msa0765320:CDS
AAACATAATTATAATTGGAG+TGG 0.526830 5_2:-26006540 Msa0765320:three_prime_UTR
ATGTGGCGGTTGTGAGGGGT+TGG 0.529770 5_2:+26007159 None:intergenic
GAATGAAAGAGAAAGAAGAA+GGG 0.530129 5_2:-26012434 Msa0765320:five_prime_UTR
ACCAAAGTCTTGAAAATGCA+TGG 0.532196 5_2:-26009520 Msa0765320:CDS
TAATGAAGAATCTAAGAAGA+AGG 0.532544 5_2:-26012195 Msa0765320:CDS
GTGAGGAAATTCAGCCATGT+TGG 0.532834 5_2:-26009237 Msa0765320:CDS
GAATGTACCTAACATTCTAA+AGG 0.533989 5_2:+26006965 None:intergenic
AGAAGAACGAACACGCGAGA+TGG 0.535700 5_2:+26007049 None:intergenic
ACTCTAAGCACGCTAACCTT+CGG 0.538712 5_2:+26006872 None:intergenic
GCAGCTAAGGATCTGAACAT+AGG 0.539437 5_2:+26008167 None:intergenic
AACTTCCTGATGAAAACACT+TGG 0.539508 5_2:-26007211 Msa0765320:CDS
AAAAGTTGATGCAGAGAACA+TGG 0.540847 5_2:-26009543 Msa0765320:CDS
ATGTTCAGATCCTTAGCTGC+GGG 0.542304 5_2:-26008164 Msa0765320:CDS
TCTCTTTCTTAAACGCTCCA+AGG 0.544580 5_2:+26012308 None:intergenic
ACTAGGAATTCCCGCAGCTA+AGG 0.546829 5_2:+26008154 None:intergenic
GACGACTACTATCACGCAGC+AGG 0.550419 5_2:+26006755 None:intergenic
TTTGTTTGTTGAGTGTGCAT+AGG 0.550788 5_2:-26006608 Msa0765320:three_prime_UTR
TTTGGCTTTAGCATGCAACT+TGG 0.554529 5_2:-26012333 Msa0765320:five_prime_UTR
ACCAATACCAAATGCTGGAT+CGG 0.555668 5_2:+26006800 None:intergenic
CATGAAAGGTAATATTCCTA+GGG 0.555758 5_2:+26006904 None:intergenic
AATTCTGATTTCAAGAAAGG+AGG 0.558222 5_2:-26011399 Msa0765320:CDS
TAACATTCTAAAGGAGGGGT+AGG 0.560101 5_2:+26006974 None:intergenic
AGGAAATTCAGCCATGTTGG+AGG 0.560481 5_2:-26009234 Msa0765320:intron
AGATTCTTGTACCTGTGTGA+AGG 0.561596 5_2:+26012799 None:intergenic
ATTGCAATCTTTCTCAAACC+AGG 0.562762 5_2:+26007023 None:intergenic
TATGATATTGATAGGAGTAG+TGG 0.564084 5_2:-26013044 None:intergenic
CAGATTCTGATGCTTCATCT+CGG 0.564507 5_2:+26010432 None:intergenic
TAGCAAAGGTGGTTTCAGGC+AGG 0.569644 5_2:-26010672 Msa0765320:intron
GAAGAACAGATAAACAATGA+TGG 0.570586 5_2:-26008242 Msa0765320:CDS
GCAGGAGGATGATATATTGA+GGG 0.572036 5_2:-26011978 Msa0765320:intron
AACATAGGGGTAACTTGAAG+AGG 0.572068 5_2:+26008182 None:intergenic
AAGTCTTGAAAATGCATGGA+AGG 0.572703 5_2:-26009516 Msa0765320:intron
TACCTAACATTCTAAAGGAG+GGG 0.584091 5_2:+26006970 None:intergenic
TTCGGTGCTAGTATCATGAA+AGG 0.584220 5_2:+26006890 None:intergenic
GAAAGTTCTGAACACAGTAC+AGG 0.585494 5_2:-26009099 Msa0765320:CDS
GTACCTAACATTCTAAAGGA+GGG 0.586530 5_2:+26006969 None:intergenic
ACTGAACTCTGCACTTGACA+AGG 0.588145 5_2:+26008208 None:intergenic
ATATGATTATGTTAGTGCGC+GGG 0.588755 5_2:+26012966 None:intergenic
CATTGTCACGTGGACTCAAG+AGG 0.590009 5_2:-26012165 Msa0765320:intron
TGCAATGTGGCGGTTGTGAG+GGG 0.592894 5_2:+26007155 None:intergenic
AGGAACCAATATCACATGAA+AGG 0.593940 5_2:+26012666 None:intergenic
TTTGCAATGTGGCGGTTGTG+AGG 0.598610 5_2:+26007153 None:intergenic
ATAGGCATCATATTTGCCAC+TGG 0.598718 5_2:+26006630 None:intergenic
TGTACCTAACATTCTAAAGG+AGG 0.599609 5_2:+26006968 None:intergenic
AGAATGTTAGGTACATTCTG+AGG 0.600092 5_2:-26006960 Msa0765320:three_prime_UTR
AGACTTGAAGAATAATAGTG+AGG 0.601359 5_2:-26009254 Msa0765320:CDS
AACCAATATCACATGAAAGG+TGG 0.601687 5_2:+26012669 None:intergenic
ACGAACACGCGAGATGGTCG+CGG 0.604580 5_2:+26007055 None:intergenic
ACATAGGGGTAACTTGAAGA+GGG 0.605311 5_2:+26008183 None:intergenic
GTGGACAGAAATAGCAAAGG+TGG 0.607231 5_2:-26010683 Msa0765320:CDS
TTTCATGATACTAGCACCGA+AGG 0.607979 5_2:-26006888 Msa0765320:three_prime_UTR
CTGATTTCAAGAAAGGAGGA+TGG 0.615740 5_2:-26011395 Msa0765320:CDS
AACATAAAGTACCTCCAACA+TGG 0.620527 5_2:+26009223 None:intergenic
AAAGGTAATATTCCTAGGGG+AGG 0.621784 5_2:+26006908 None:intergenic
GAGTGTTCTAAATTCTCACC+AGG 0.622031 5_2:+26009054 None:intergenic
CACGCGAGATGGTCGCGGTG+AGG 0.622223 5_2:+26007060 None:intergenic
CATCTTGAGTGTGTATACAA+TGG 0.635964 5_2:-26006733 Msa0765320:three_prime_UTR
AAATTCTCACCAGGACAATG+AGG 0.636006 5_2:+26009063 None:intergenic
AACACAATACATACAGTGAG+AGG 0.636372 5_2:-26012468 Msa0765320:five_prime_UTR
GGAAGATATGCTCTTATGTG+AGG 0.638152 5_2:-26011364 Msa0765320:intron
TATATGATTATGTTAGTGCG+CGG 0.655536 5_2:+26012965 None:intergenic
TTGAGCTAAAACTGCCAATG+GGG 0.661007 5_2:+26010310 None:intergenic
TATGTTCAGATCCTTAGCTG+CGG 0.665978 5_2:-26008165 Msa0765320:CDS
GAAAGGAGGATGGTCACCAG+AGG 0.668385 5_2:-26011385 Msa0765320:CDS
TAGGTGGACAGAAATAGCAA+AGG 0.688241 5_2:-26010686 Msa0765320:CDS
CATAGGGGTAACTTGAAGAG+GGG 0.695434 5_2:+26008184 None:intergenic
ATGAAAGGTAATATTCCTAG+GGG 0.718576 5_2:+26006905 None:intergenic
AGGAGCGTCACATTGTCACG+TGG 0.726630 5_2:-26012175 Msa0765320:CDS
AGCTAAGGATCTGAACATAG+GGG 0.729667 5_2:+26008169 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAAAACAAACAAAAA+AGG + chr5_2:26007023-26007042 None:intergenic 10.0%
!! TACAATTAAAATTCTTAAAA+GGG - chr5_2:26009558-26009577 Msa0765320:CDS 10.0%
!! AATAATTAACCATTTAAATT+TGG + chr5_2:26011015-26011034 None:intergenic 10.0%
!!! ATAAAAGATTTTATCTTTTA+AGG + chr5_2:26011074-26011093 None:intergenic 10.0%
!!! TTTCTTATTTTTATTTTTTC+AGG - chr5_2:26012186-26012205 Msa0765320:CDS 10.0%
!! TATTGAAACATAATTATAAT+TGG - chr5_2:26012880-26012899 Msa0765320:five_prime_UTR 10.0%
!! TGATTAATGTTTATTCTATA+TGG + chr5_2:26007167-26007186 None:intergenic 15.0%
!!! GTGAAGTTTTTTTAAAATTT+TGG - chr5_2:26007857-26007876 Msa0765320:intron 15.0%
!! ATTTATGTTATAGTAAGATT+TGG - chr5_2:26008615-26008634 Msa0765320:intron 15.0%
!!! ATTAGTCCTTTAATAATTTT+TGG + chr5_2:26009534-26009553 None:intergenic 15.0%
!! CTACAATTAAAATTCTTAAA+AGG - chr5_2:26009557-26009576 Msa0765320:CDS 15.0%
!! TTAACATATATTCTATACTT+TGG + chr5_2:26009959-26009978 None:intergenic 15.0%
!!! TTCATGATTTTCATAAATAT+AGG + chr5_2:26010006-26010025 None:intergenic 15.0%
!!! ATTTATCAATATTTTAAACC+TGG + chr5_2:26010909-26010928 None:intergenic 15.0%
!! ATTTAAATTTGGTTAAAAAG+TGG + chr5_2:26011004-26011023 None:intergenic 15.0%
!!! ACTTTTTAACCAAATTTAAA+TGG - chr5_2:26011003-26011022 Msa0765320:intron 15.0%
!! AGTAATAATATGACAAATTA+TGG - chr5_2:26011400-26011419 Msa0765320:CDS 15.0%
!!! AATTAACATAATTTGCATAT+TGG - chr5_2:26011819-26011838 Msa0765320:intron 15.0%
!! TCATGTTACTAAAAAAAAAA+GGG - chr5_2:26011857-26011876 Msa0765320:intron 15.0%
!!! ATATTTTCCTTATAAAACTA+AGG + chr5_2:26012086-26012105 None:intergenic 15.0%
!!! AAATTTAAGTCTTTTAAACA+AGG - chr5_2:26012135-26012154 Msa0765320:intron 15.0%
!!! AATTTAAGTCTTTTAAACAA+GGG - chr5_2:26012136-26012155 Msa0765320:intron 15.0%
!! AATAAAAATAAGAAATGTCA+GGG + chr5_2:26012181-26012200 None:intergenic 15.0%
!! AAATAAAAATAAGAAATGTC+AGG + chr5_2:26012182-26012201 None:intergenic 15.0%
!!! TATTTTTATTTTTTCAGGAA+AGG - chr5_2:26012191-26012210 Msa0765320:CDS 15.0%
!!! AAATAATTCTTTTCCTTTTT+TGG - chr5_2:26012849-26012868 Msa0765320:five_prime_UTR 15.0%
!! TTATACAGAATATAGATAAA+TGG + chr5_2:26012984-26013003 None:intergenic 15.0%
!! TATAATTCTTCAAACAAAAA+GGG - chr5_2:26012999-26013018 Msa0765320:five_prime_UTR 15.0%
!! TATAAAAAATGTGTAGTGTA+GGG + chr5_2:26006521-26006540 None:intergenic 20.0%
!!! AAATACATATTTTGATGAAG+TGG + chr5_2:26006714-26006733 None:intergenic 20.0%
!! AATGTTTAGTGTTCTTATTA+AGG + chr5_2:26006782-26006801 None:intergenic 20.0%
!! ACAAAAAAGCTATTATTCAA+TGG + chr5_2:26006882-26006901 None:intergenic 20.0%
!!! GAATAATAGCTTTTTTGTTA+AGG - chr5_2:26006884-26006903 Msa0765320:three_prime_UTR 20.0%
!!! TTTATTCTATATGGTTTGTT+TGG + chr5_2:26007158-26007177 None:intergenic 20.0%
!! AGTAGTAACAATATCAAAAA+GGG + chr5_2:26007512-26007531 None:intergenic 20.0%
!! TAGTAGTAACAATATCAAAA+AGG + chr5_2:26007513-26007532 None:intergenic 20.0%
!! AAAAAATAAGTCAATCCAAA+CGG + chr5_2:26007554-26007573 None:intergenic 20.0%
!! AATAATTGCTTCTAAATTCA+AGG - chr5_2:26007806-26007825 Msa0765320:intron 20.0%
!! AAAGAATAATACAGAAAAAC+TGG + chr5_2:26007920-26007939 None:intergenic 20.0%
!!! AGTTTTTCTGTATTATTCTT+TGG - chr5_2:26007919-26007938 Msa0765320:intron 20.0%
!!! ACAAGCTTATTTTATAATAG+TGG - chr5_2:26008356-26008375 Msa0765320:intron 20.0%
!!! CAAAACAAATTACTTTTCAT+TGG + chr5_2:26008588-26008607 None:intergenic 20.0%
!! CTCAAAAAATATTTGGAAAT+AGG - chr5_2:26008720-26008739 Msa0765320:intron 20.0%
!! AAAAAATATTTGGAAATAGG+TGG - chr5_2:26008723-26008742 Msa0765320:intron 20.0%
!!! AATGTATTTTGCGTAATAAT+CGG + chr5_2:26009327-26009346 None:intergenic 20.0%
!! TTGTTTAATTGTACCAAAAT+TGG - chr5_2:26009362-26009381 Msa0765320:intron 20.0%
!!! GGTAATTTTTGTAACTTTAT+AGG - chr5_2:26009688-26009707 Msa0765320:intron 20.0%
!! ATTATAAATGATAGGATGTT+TGG + chr5_2:26009736-26009755 None:intergenic 20.0%
!! TGAGTTACATTATAAATGAT+AGG + chr5_2:26009744-26009763 None:intergenic 20.0%
!! TGTAGATCTTAAAGATTTAT+TGG - chr5_2:26010147-26010166 Msa0765320:intron 20.0%
!! TATACAAATTGAACATCAAA+AGG - chr5_2:26010427-26010446 Msa0765320:intron 20.0%
!!! CTGATATTTTTTTATCAATC+TGG + chr5_2:26010640-26010659 None:intergenic 20.0%
!!! TTAAGGAAACTGAAATTTTT+TGG + chr5_2:26011057-26011076 None:intergenic 20.0%
!! GTCATGTTACTAAAAAAAAA+AGG - chr5_2:26011856-26011875 Msa0765320:intron 20.0%
!! AAACATAATTATAATTGGAG+TGG - chr5_2:26012885-26012904 Msa0765320:five_prime_UTR 20.0%
!! GTATAATTCTTCAAACAAAA+AGG - chr5_2:26012998-26013017 Msa0765320:five_prime_UTR 20.0%
! GTATAAAAAATGTGTAGTGT+AGG + chr5_2:26006522-26006541 None:intergenic 25.0%
! CTCTCTAACTTTATTGAAAA+CGG + chr5_2:26006570-26006589 None:intergenic 25.0%
! GGAAAAAAAACTGATATGTT+TGG + chr5_2:26006608-26006627 None:intergenic 25.0%
! AAAGGTGGAAAATAGAAAAA+GGG + chr5_2:26006744-26006763 None:intergenic 25.0%
! GAATGGAATTTATGCTATTA+CGG - chr5_2:26006917-26006936 Msa0765320:three_prime_UTR 25.0%
!!! TATTATAAAGGAAGAGTGTT+TGG - chr5_2:26007074-26007093 Msa0765320:three_prime_UTR 25.0%
! TAATGAAGAATCTAAGAAGA+AGG - chr5_2:26007230-26007249 Msa0765320:intron 25.0%
! TTTATGATTATCATTCCGTT+TGG - chr5_2:26007536-26007555 Msa0765320:intron 25.0%
!!! TTATGTTGATTCATAAGTTC+TGG - chr5_2:26007612-26007631 Msa0765320:intron 25.0%
! TTTAAGTGACTTATATCAGA+TGG - chr5_2:26007991-26008010 Msa0765320:intron 25.0%
! TTGAATTCTGATTTCAAGAA+AGG - chr5_2:26008023-26008042 Msa0765320:intron 25.0%
!!! AAGTGAATCTTTGAAACATA+GGG + chr5_2:26008098-26008117 None:intergenic 25.0%
!!! AAAGTGAATCTTTGAAACAT+AGG + chr5_2:26008099-26008118 None:intergenic 25.0%
!! GATTGTCATTGGAATTATTT+TGG - chr5_2:26008129-26008148 Msa0765320:intron 25.0%
! CATTTATGTATTTAGTGTGT+GGG - chr5_2:26008464-26008483 Msa0765320:intron 25.0%
! ATTTATGTATTTAGTGTGTG+GGG - chr5_2:26008465-26008484 Msa0765320:intron 25.0%
! AAACTAAACGTACACTTAAA+GGG - chr5_2:26008556-26008575 Msa0765320:intron 25.0%
! CTTTAGGCTCAAAAAATATT+TGG - chr5_2:26008713-26008732 Msa0765320:intron 25.0%
! TGAAAAGAAAGTGACTATTT+AGG + chr5_2:26008811-26008830 None:intergenic 25.0%
!!! AATGTTGTTTTCTTTTGCTA+AGG + chr5_2:26008938-26008957 None:intergenic 25.0%
! ACACGAATTCAAATAACAAA+AGG - chr5_2:26008962-26008981 Msa0765320:intron 25.0%
! AATGTGAAGTTTAGTGATTA+TGG - chr5_2:26009183-26009202 Msa0765320:intron 25.0%
!!! ATACATGTGTATTTTTGTAG+CGG - chr5_2:26009450-26009469 Msa0765320:intron 25.0%
! TTAGACAAAATACATCATTG+CGG + chr5_2:26009584-26009603 None:intergenic 25.0%
!! AAACATCTGATTCTTTGTTT+CGG + chr5_2:26010099-26010118 None:intergenic 25.0%
! AAAATAGAATAACTTTCACG+AGG - chr5_2:26010237-26010256 Msa0765320:intron 25.0%
! AAATAGAATAACTTTCACGA+GGG - chr5_2:26010238-26010257 Msa0765320:intron 25.0%
! ATAGCTTCTGAATGTATAAT+AGG - chr5_2:26010276-26010295 Msa0765320:CDS 25.0%
! CTGAATGTATAATAGGTATA+TGG - chr5_2:26010283-26010302 Msa0765320:CDS 25.0%
! ATTGAACATCAAAAGGAAAT+TGG - chr5_2:26010434-26010453 Msa0765320:CDS 25.0%
!!! ACACTGATATTTTTTATCAC+TGG + chr5_2:26010519-26010538 None:intergenic 25.0%
!!! ATCAATATTTTAAACCTGGA+CGG + chr5_2:26010905-26010924 None:intergenic 25.0%
!! CTATCTTTGTTACAACTTTT+AGG + chr5_2:26011432-26011451 None:intergenic 25.0%
! TTAGTAATGTTGTTAGATAG+TGG - chr5_2:26011555-26011574 Msa0765320:intron 25.0%
! TCGTGAAAACAGTAATAATT+TGG - chr5_2:26011742-26011761 Msa0765320:intron 25.0%
! ATTTCATCATTAACATGAGT+TGG - chr5_2:26011927-26011946 Msa0765320:intron 25.0%
! TTTCATCATTAACATGAGTT+GGG - chr5_2:26011928-26011947 Msa0765320:intron 25.0%
! AGATAGTTATGTAACTTCAT+AGG - chr5_2:26011982-26012001 Msa0765320:intron 25.0%
! AGTATATCATGTAACTAAAC+AGG - chr5_2:26012048-26012067 Msa0765320:intron 25.0%
!!! AACAGATCCTTAGTTTTATA+AGG - chr5_2:26012076-26012095 Msa0765320:intron 25.0%
! TTCATATTAACTTTGTAGCA+GGG + chr5_2:26012302-26012321 None:intergenic 25.0%
! ATTCATATTAACTTTGTAGC+AGG + chr5_2:26012303-26012322 None:intergenic 25.0%
!!! GTTCAGCCTAAAATTTTAAT+AGG - chr5_2:26012428-26012447 Msa0765320:five_prime_UTR 25.0%
!! TGTTTTCTTTGATATCTTTC+TGG - chr5_2:26012590-26012609 Msa0765320:five_prime_UTR 25.0%
!! GTTTTCTTTGATATCTTTCT+GGG - chr5_2:26012591-26012610 Msa0765320:five_prime_UTR 25.0%
! TTCATTATATGTAGTACGAT+TGG + chr5_2:26012725-26012744 None:intergenic 25.0%
! CAATACATAAGAACCAAAAA+AGG + chr5_2:26012865-26012884 None:intergenic 25.0%
TATATGATTATGTTAGTGCG+CGG + chr5_2:26006463-26006482 None:intergenic 30.0%
GAAAGGTGGAAAATAGAAAA+AGG + chr5_2:26006745-26006764 None:intergenic 30.0%
!!! GTTCTGTTTTTGTTCTGTTT+TGG - chr5_2:26006802-26006821 Msa0765320:three_prime_UTR 30.0%
AAGCTATTATTCAATGGCTT+TGG + chr5_2:26006876-26006895 None:intergenic 30.0%
!!! ATACAGTGAGAGGTTTTAAA+AGG - chr5_2:26006967-26006986 Msa0765320:three_prime_UTR 30.0%
TGAATGAAAGAGAAAGAAGA+AGG - chr5_2:26006990-26007009 Msa0765320:three_prime_UTR 30.0%
GAATGAAAGAGAAAGAAGAA+GGG - chr5_2:26006991-26007010 Msa0765320:three_prime_UTR 30.0%
GATATATTGAGGGATCAAAT+TGG - chr5_2:26007457-26007476 Msa0765320:intron 30.0%
! ATTAGTACTTTTCAGTTCCA+TGG + chr5_2:26007486-26007505 None:intergenic 30.0%
!! ATTCATAAGTTCTGGAGTAA+CGG - chr5_2:26007620-26007639 Msa0765320:intron 30.0%
TTTCAATAACTCAATGCAGT+TGG - chr5_2:26007781-26007800 Msa0765320:intron 30.0%
TTCAATAACTCAATGCAGTT+GGG - chr5_2:26007782-26007801 Msa0765320:intron 30.0%
AATTCTGATTTCAAGAAAGG+AGG - chr5_2:26008026-26008045 Msa0765320:intron 30.0%
TAATTCCAATGACAATCACA+TGG + chr5_2:26008126-26008145 None:intergenic 30.0%
CCACACACTAAATACATAAA+TGG + chr5_2:26008466-26008485 None:intergenic 30.0%
CCATTTATGTATTTAGTGTG+TGG - chr5_2:26008463-26008482 Msa0765320:intron 30.0%
GAAACTAAACGTACACTTAA+AGG - chr5_2:26008555-26008574 Msa0765320:intron 30.0%
!! GTTCTTGCTATTATCTCTTT+AGG - chr5_2:26008697-26008716 Msa0765320:intron 30.0%
TATTTGCTTTGTATGCAGAA+CGG - chr5_2:26008855-26008874 Msa0765320:intron 30.0%
CCTCATCTTCTTAAAATCTA+CGG + chr5_2:26009019-26009038 None:intergenic 30.0%
!! TAGATTTTAAGAAGATGAGG+AGG - chr5_2:26009019-26009038 Msa0765320:CDS 30.0%
ATATGAGTTTCAAAACTGCA+AGG + chr5_2:26009247-26009266 None:intergenic 30.0%
! CAAAAATTAACGGCCAATTT+TGG + chr5_2:26009378-26009397 None:intergenic 30.0%
!! TTGGCCGTTAATTTTTGTTT+TGG - chr5_2:26009381-26009400 Msa0765320:intron 30.0%
GGGACCAAAACAAAAATTAA+CGG + chr5_2:26009388-26009407 None:intergenic 30.0%
AAACTTAAAAAGACCAATGC+GGG + chr5_2:26009408-26009427 None:intergenic 30.0%
GAAACTTAAAAAGACCAATG+CGG + chr5_2:26009409-26009428 None:intergenic 30.0%
GTGGGACCAAAAATTATTAA+AGG - chr5_2:26009525-26009544 Msa0765320:CDS 30.0%
TCAAGGAACATTCCTTAAAA+AGG - chr5_2:26009801-26009820 Msa0765320:intron 30.0%
! TCTTTGGATCATCCTTTTTA+AGG + chr5_2:26009816-26009835 None:intergenic 30.0%
TCATAAACTCTTGAAGAATC+TGG + chr5_2:26010075-26010094 None:intergenic 30.0%
AACAAAGAATCAGATGTTTC+TGG - chr5_2:26010100-26010119 Msa0765320:intron 30.0%
AGACTTGAAGAATAATAGTG+AGG - chr5_2:26010171-26010190 Msa0765320:intron 30.0%
CAGATTAACTGCTTAAAACA+CGG - chr5_2:26010755-26010774 Msa0765320:intron 30.0%
GTTTAATGGTTCAATAGGTT+CGG + chr5_2:26010859-26010878 None:intergenic 30.0%
! GGCTACAGATTAAACATTTT+TGG + chr5_2:26010983-26011002 None:intergenic 30.0%
GAAGAACAGATAAACAATGA+TGG - chr5_2:26011183-26011202 Msa0765320:intron 30.0%
! CTTACACTTTCTGAAAATTG+TGG + chr5_2:26011297-26011316 None:intergenic 30.0%
CATTACTAAATAGCTTATCG+CGG + chr5_2:26011544-26011563 None:intergenic 30.0%
!! TAGAACAACTTCAGTTTTAG+TGG - chr5_2:26011695-26011714 Msa0765320:intron 30.0%
AAATCTTAAGCTCAATGCAT+AGG + chr5_2:26011781-26011800 None:intergenic 30.0%
! TTGCATATTGGATTAGACTA+AGG - chr5_2:26011831-26011850 Msa0765320:intron 30.0%
! AGTTGATGCAGATAAAATCT+AGG - chr5_2:26011885-26011904 Msa0765320:intron 30.0%
! GGTAGGCCTATTAAAATTTT+AGG + chr5_2:26012437-26012456 None:intergenic 30.0%
GAATGTACCTAACATTCTAA+AGG + chr5_2:26012463-26012482 None:intergenic 30.0%
GACACTGTTAAATATGTTGA+AGG + chr5_2:26012492-26012511 None:intergenic 30.0%
ATGAAAGGTAATATTCCTAG+GGG + chr5_2:26012523-26012542 None:intergenic 30.0%
CATGAAAGGTAATATTCCTA+GGG + chr5_2:26012524-26012543 None:intergenic 30.0%
TCATGAAAGGTAATATTCCT+AGG + chr5_2:26012525-26012544 None:intergenic 30.0%
TGTTTCTCTTCTATCTAACT+TGG - chr5_2:26012945-26012964 Msa0765320:five_prime_UTR 30.0%
ATATGATTATGTTAGTGCGC+GGG + chr5_2:26006462-26006481 None:intergenic 35.0%
!!! CAGTTTTTTTTCCTTCACAC+AGG - chr5_2:26006615-26006634 Msa0765320:three_prime_UTR 35.0%
GAAGTGGTAGATCTAAAAAG+TGG + chr5_2:26006698-26006717 None:intergenic 35.0%
TTCCACCTTTCATGTGATAT+TGG - chr5_2:26006754-26006773 Msa0765320:three_prime_UTR 35.0%
AACCAATATCACATGAAAGG+TGG + chr5_2:26006759-26006778 None:intergenic 35.0%
AGGAACCAATATCACATGAA+AGG + chr5_2:26006762-26006781 None:intergenic 35.0%
!! GTTAAGGTAGCTTTTGAGAA+TGG - chr5_2:26006900-26006919 Msa0765320:three_prime_UTR 35.0%
AACACAATACATACAGTGAG+AGG - chr5_2:26006957-26006976 Msa0765320:three_prime_UTR 35.0%
!! TGTTATGTTCTTTGAGTTGC+AGG - chr5_2:26007429-26007448 Msa0765320:intron 35.0%
AGTCTTACATACAGCTCATT+TGG + chr5_2:26007748-26007767 None:intergenic 35.0%
TGAGCTGTATGTAAGACTAA+AGG - chr5_2:26007750-26007769 Msa0765320:intron 35.0%
GAGCTGTATGTAAGACTAAA+GGG - chr5_2:26007751-26007770 Msa0765320:intron 35.0%
TCATACCATGTGATTGTCAT+TGG - chr5_2:26008118-26008137 Msa0765320:intron 35.0%
GATAACCAGATACAGTGTTA+AGG + chr5_2:26008155-26008174 None:intergenic 35.0%
TAACACTGTATCTGGTTATC+CGG - chr5_2:26008155-26008174 Msa0765320:CDS 35.0%
ACTAGGCTTTACTTATCTTC+CGG + chr5_2:26008188-26008207 None:intergenic 35.0%
! GATTATCAGTGTCTGAAACT+AGG + chr5_2:26008205-26008224 None:intergenic 35.0%
AGTTTCAGACACTGATAATC+CGG - chr5_2:26008205-26008224 Msa0765320:CDS 35.0%
CTTATCTTCTGATCAAACTC+CGG + chr5_2:26008227-26008246 None:intergenic 35.0%
GCTCATTAAGTACTTGATGT+TGG - chr5_2:26008271-26008290 Msa0765320:intron 35.0%
AAGTACTTGATGTTGGAACT+CGG - chr5_2:26008278-26008297 Msa0765320:intron 35.0%
GTTCATTAACCACTTGATGT+TGG - chr5_2:26008327-26008346 Msa0765320:intron 35.0%
TGTTAAACTCCAACATCAAG+TGG + chr5_2:26008339-26008358 None:intergenic 35.0%
!! TTTCACTTTTGCACGAGATA+GGG + chr5_2:26008539-26008558 None:intergenic 35.0%
! TTTTGCACAATGTGGAGAAA+CGG + chr5_2:26008897-26008916 None:intergenic 35.0%
!! CCGTAGATTTTAAGAAGATG+AGG - chr5_2:26009016-26009035 Msa0765320:CDS 35.0%
! TGATCTTTTCTGCATCATCA+GGG + chr5_2:26009053-26009072 None:intergenic 35.0%
TTTGAGCTAAAACTGCCAAT+GGG + chr5_2:26009119-26009138 None:intergenic 35.0%
! TTTTGAGCTAAAACTGCCAA+TGG + chr5_2:26009120-26009139 None:intergenic 35.0%
! TTTTGCGTAATAATCGGTGA+AGG + chr5_2:26009321-26009340 None:intergenic 35.0%
GAATGTGTAGAAAAGGGTAA+CGG - chr5_2:26009472-26009491 Msa0765320:intron 35.0%
GTACGAGTTATAGGACTTAA+AGG - chr5_2:26009496-26009515 Msa0765320:intron 35.0%
TAGGACTTAAAGGAACTATG+TGG - chr5_2:26009506-26009525 Msa0765320:intron 35.0%
AGGACTTAAAGGAACTATGT+GGG - chr5_2:26009507-26009526 Msa0765320:intron 35.0%
GCTCAAAACAACAAGATTCA+AGG - chr5_2:26009784-26009803 Msa0765320:intron 35.0%
TGCATCAACGCATTTATCTT+TGG + chr5_2:26009832-26009851 None:intergenic 35.0%
!! AAAAGTTGATGCAGAGAACA+TGG - chr5_2:26009882-26009901 Msa0765320:intron 35.0%
ACCAAAGTCTTGAAAATGCA+TGG - chr5_2:26009905-26009924 Msa0765320:intron 35.0%
!! TCCATGCATTTTCAAGACTT+TGG + chr5_2:26009909-26009928 None:intergenic 35.0%
AAGTCTTGAAAATGCATGGA+AGG - chr5_2:26009909-26009928 Msa0765320:intron 35.0%
AGATCTACAAGCTGTAAATC+TGG + chr5_2:26010136-26010155 None:intergenic 35.0%
! AACATAAAGTACCTCCAACA+TGG + chr5_2:26010205-26010224 None:intergenic 35.0%
! GATTCTTTCTAGTGCAACTT+TGG - chr5_2:26010472-26010491 Msa0765320:CDS 35.0%
! AAACCAAACAGTTTTCCTGT+TGG - chr5_2:26010583-26010602 Msa0765320:intron 35.0%
AATCAGAATGCAATGTAACC+AGG + chr5_2:26010614-26010633 None:intergenic 35.0%
!! CGTGTTTTAAGCAGTTAATC+TGG + chr5_2:26010757-26010776 None:intergenic 35.0%
TTAACTGCTTAAAACACGGT+TGG - chr5_2:26010759-26010778 Msa0765320:intron 35.0%
CCTCAGTTTAATGGTTCAAT+AGG + chr5_2:26010864-26010883 None:intergenic 35.0%
CCTATTGAACCATTAAACTG+AGG - chr5_2:26010861-26010880 Msa0765320:intron 35.0%
!!! TTTTTTAGTAACCAGTCTCC+TGG - chr5_2:26010946-26010965 Msa0765320:intron 35.0%
!! TTTTTAGTAACCAGTCTCCT+GGG - chr5_2:26010947-26010966 Msa0765320:intron 35.0%
!!! TTTTTGGAACGTATTTACCC+AGG + chr5_2:26010967-26010986 None:intergenic 35.0%
! CTTTCTGAAAATTGTGGACT+AGG + chr5_2:26011291-26011310 None:intergenic 35.0%
!! GAAAGTTTTGCTGCTGATTA+AGG + chr5_2:26011659-26011678 None:intergenic 35.0%
!! AACAACTTCAGTTTTAGTGG+TGG - chr5_2:26011698-26011717 Msa0765320:intron 35.0%
!! ACAACTTCAGTTTTAGTGGT+GGG - chr5_2:26011699-26011718 Msa0765320:intron 35.0%
AACTTCCTGATGAAAACACT+TGG - chr5_2:26012214-26012233 Msa0765320:CDS 35.0%
ATTGCAATCTTTCTCAAACC+AGG + chr5_2:26012405-26012424 None:intergenic 35.0%
! TACCTAACATTCTAAAGGAG+GGG + chr5_2:26012458-26012477 None:intergenic 35.0%
! GTACCTAACATTCTAAAGGA+GGG + chr5_2:26012459-26012478 None:intergenic 35.0%
! TGTACCTAACATTCTAAAGG+AGG + chr5_2:26012460-26012479 None:intergenic 35.0%
AGAATGTTAGGTACATTCTG+AGG - chr5_2:26012465-26012484 Msa0765320:five_prime_UTR 35.0%
AACAAACCAATACCAAATGC+TGG + chr5_2:26012633-26012652 None:intergenic 35.0%
CATCTTGAGTGTGTATACAA+TGG - chr5_2:26012692-26012711 Msa0765320:five_prime_UTR 35.0%
! AGTGTAAAAAGATTAGCCAG+TGG - chr5_2:26012779-26012798 Msa0765320:five_prime_UTR 35.0%
TGCACACTCAACAAACAAAT+AGG + chr5_2:26012816-26012835 None:intergenic 35.0%
! TTTGTTTGTTGAGTGTGCAT+AGG - chr5_2:26012817-26012836 Msa0765320:five_prime_UTR 35.0%
! ATTGGAGTGGAAATGCATTT+TGG - chr5_2:26012898-26012917 Msa0765320:five_prime_UTR 35.0%
AGATTCTTGTACCTGTGTGA+AGG + chr5_2:26006629-26006648 None:intergenic 40.0%
!! TTTGGCTTTAGCATGCAACT+TGG - chr5_2:26007092-26007111 Msa0765320:three_prime_UTR 40.0%
TCTCTTTCTTAAACGCTCCA+AGG + chr5_2:26007120-26007139 None:intergenic 40.0%
!! TATGTTCTTTGAGTTGCAGG+AGG - chr5_2:26007432-26007451 Msa0765320:intron 40.0%
TGCAGGAGGATGATATATTG+AGG - chr5_2:26007446-26007465 Msa0765320:intron 40.0%
GCAGGAGGATGATATATTGA+GGG - chr5_2:26007447-26007466 Msa0765320:intron 40.0%
AGGGATCAAATTGGAATCCA+TGG - chr5_2:26007466-26007485 Msa0765320:intron 40.0%
ACAAGACTACAAGACAGTGT+AGG - chr5_2:26007829-26007848 Msa0765320:intron 40.0%
TCTTTGGATCGTGAAGACTT+TGG - chr5_2:26007935-26007954 Msa0765320:intron 40.0%
CTGATTTCAAGAAAGGAGGA+TGG - chr5_2:26008030-26008049 Msa0765320:intron 40.0%
! CATAAGAGCATATCTTCCTC+TGG + chr5_2:26008059-26008078 None:intergenic 40.0%
GGAAGATATGCTCTTATGTG+AGG - chr5_2:26008061-26008080 Msa0765320:intron 40.0%
!! TTTGGCCTTAACACTGTATC+TGG - chr5_2:26008147-26008166 Msa0765320:CDS 40.0%
GATAAGTAAAGCCTAGTTCC+AGG - chr5_2:26008241-26008260 Msa0765320:CDS 40.0%
!! GTTTCACTTTTGCACGAGAT+AGG + chr5_2:26008540-26008559 None:intergenic 40.0%
TAGGTGGACAGAAATAGCAA+AGG - chr5_2:26008739-26008758 Msa0765320:intron 40.0%
GAAATAGCAAAGGTGGTTTC+AGG - chr5_2:26008749-26008768 Msa0765320:intron 40.0%
! TGTGGAGAAACGGTTTTTCA+CGG + chr5_2:26008887-26008906 None:intergenic 40.0%
! AGCTCTCTTTTTGCACAATG+TGG + chr5_2:26008905-26008924 None:intergenic 40.0%
CAGATTCTGATGCTTCATCT+CGG + chr5_2:26008996-26009015 None:intergenic 40.0%
! CTGATCTTTTCTGCATCATC+AGG + chr5_2:26009054-26009073 None:intergenic 40.0%
TTGAGCTAAAACTGCCAATG+GGG + chr5_2:26009118-26009137 None:intergenic 40.0%
ATTCTGGTCTGGCAAGTTAT+TGG + chr5_2:26009154-26009173 None:intergenic 40.0%
TCACATTGCAGACATGATTC+TGG + chr5_2:26009170-26009189 None:intergenic 40.0%
!!! TTTTTGTTTTGGTCCCGCAT+TGG - chr5_2:26009392-26009411 Msa0765320:intron 40.0%
! TGTAGCGGAATGTGTAGAAA+AGG - chr5_2:26009465-26009484 Msa0765320:intron 40.0%
! GTAGCGGAATGTGTAGAAAA+GGG - chr5_2:26009466-26009485 Msa0765320:intron 40.0%
AATAACTTTCACGAGGGATG+CGG - chr5_2:26010244-26010263 Msa0765320:CDS 40.0%
GTACTGTGTTCAGAACTTTC+TGG + chr5_2:26010326-26010345 None:intergenic 40.0%
!! GAAAGTTCTGAACACAGTAC+AGG - chr5_2:26010326-26010345 Msa0765320:CDS 40.0%
AAATTCTCACCAGGACAATG+AGG + chr5_2:26010365-26010384 None:intergenic 40.0%
TCTAGTGCAACTTTGGATCA+AGG - chr5_2:26010479-26010498 Msa0765320:CDS 40.0%
! CAGGAAAACTGTTTGGTTTC+CGG + chr5_2:26010582-26010601 None:intergenic 40.0%
CAACCAACAGGAAAACTGTT+TGG + chr5_2:26010589-26010608 None:intergenic 40.0%
TGTCATCTATTTCAACCGTG+TGG - chr5_2:26010824-26010843 Msa0765320:intron 40.0%
ACATAGGGGTAACTTGAAGA+GGG + chr5_2:26011245-26011264 None:intergenic 40.0%
AACATAGGGGTAACTTGAAG+AGG + chr5_2:26011246-26011265 None:intergenic 40.0%
AGCTAAGGATCTGAACATAG+GGG + chr5_2:26011259-26011278 None:intergenic 40.0%
CAGCTAAGGATCTGAACATA+GGG + chr5_2:26011260-26011279 None:intergenic 40.0%
TATGTTCAGATCCTTAGCTG+CGG - chr5_2:26011260-26011279 Msa0765320:intron 40.0%
! ACGCTGCTATTTGACAACAT+TGG + chr5_2:26011485-26011504 None:intergenic 40.0%
GTGTTGTCAAATGCTAGTTG+TGG + chr5_2:26011627-26011646 None:intergenic 40.0%
!! CAACTTCAGTTTTAGTGGTG+GGG - chr5_2:26011700-26011719 Msa0765320:intron 40.0%
ACAGACAAACACAGAAATGG+TGG - chr5_2:26011951-26011970 Msa0765320:CDS 40.0%
CAGACAAACACAGAAATGGT+GGG - chr5_2:26011952-26011971 Msa0765320:CDS 40.0%
! AAACACAGAAATGGTGGGAA+AGG - chr5_2:26011957-26011976 Msa0765320:CDS 40.0%
! AACACAGAAATGGTGGGAAA+GGG - chr5_2:26011958-26011977 Msa0765320:CDS 40.0%
! CCATTCCAAGTGTTTTCATC+AGG + chr5_2:26012222-26012241 None:intergenic 40.0%
CCTGATGAAAACACTTGGAA+TGG - chr5_2:26012219-26012238 Msa0765320:CDS 40.0%
! TAACATTCTAAAGGAGGGGT+AGG + chr5_2:26012454-26012473 None:intergenic 40.0%
!! TACCCCTCCTTTAGAATGTT+AGG - chr5_2:26012453-26012472 Msa0765320:five_prime_UTR 40.0%
AAAGGTAATATTCCTAGGGG+AGG + chr5_2:26012520-26012539 None:intergenic 40.0%
!! TTCGGTGCTAGTATCATGAA+AGG + chr5_2:26012538-26012557 None:intergenic 40.0%
! TTTCATGATACTAGCACCGA+AGG - chr5_2:26012537-26012556 Msa0765320:five_prime_UTR 40.0%
! GTGCTTAGAGTGTCATTCTT+TGG - chr5_2:26012565-26012584 Msa0765320:five_prime_UTR 40.0%
! TTTTTCTCCGATCCAGCATT+TGG - chr5_2:26012618-26012637 Msa0765320:five_prime_UTR 40.0%
ACCAATACCAAATGCTGGAT+CGG + chr5_2:26012628-26012647 None:intergenic 40.0%
ATAGGCATCATATTTGCCAC+TGG + chr5_2:26012798-26012817 None:intergenic 40.0%
!!! GTGGAAATGCATTTTGGCTT+TGG - chr5_2:26012904-26012923 Msa0765320:five_prime_UTR 40.0%
GAGAAACAACATCTGCATTC+TGG + chr5_2:26012933-26012952 None:intergenic 40.0%
CTACAAGACAGTGTAGGAGA+AGG - chr5_2:26007835-26007854 Msa0765320:intron 45.0%
TTGGATCGTGAAGACTTTGG+TGG - chr5_2:26007938-26007957 Msa0765320:intron 45.0%
CTTATCTTCCGGTCAAACTC+CGG + chr5_2:26008177-26008196 None:intergenic 45.0%
ACTTAATGAGCTTCAGTGCC+TGG + chr5_2:26008262-26008281 None:intergenic 45.0%
! TTCTGTCTTTTCCCTCAGTG+AGG - chr5_2:26008428-26008447 Msa0765320:intron 45.0%
! TCTGTCTTTTCCCTCAGTGA+GGG - chr5_2:26008429-26008448 Msa0765320:intron 45.0%
TTGAAACCTACCCTCACTGA+GGG + chr5_2:26008442-26008461 None:intergenic 45.0%
ATTGAAACCTACCCTCACTG+AGG + chr5_2:26008443-26008462 None:intergenic 45.0%
TATTTAGTGTGTGGGGTTCG+CGG - chr5_2:26008472-26008491 Msa0765320:intron 45.0%
GTGGACAGAAATAGCAAAGG+TGG - chr5_2:26008742-26008761 Msa0765320:intron 45.0%
TGAAACTTCAAGAGCCCCAT+TGG - chr5_2:26009101-26009120 Msa0765320:CDS 45.0%
TTGCAGACATGATTCTGGTC+TGG + chr5_2:26009165-26009184 None:intergenic 45.0%
! GGTAACGGTGTACGAGTTAT+AGG - chr5_2:26009487-26009506 Msa0765320:intron 45.0%
GCTGCTGAATGAAAGCAAGA+TGG - chr5_2:26009667-26009686 Msa0765320:intron 45.0%
AGCTAGCGAAGTTAGTAGCT+CGG + chr5_2:26009860-26009879 None:intergenic 45.0%
GTGAGGAAATTCAGCCATGT+TGG - chr5_2:26010188-26010207 Msa0765320:intron 45.0%
AGGAAATTCAGCCATGTTGG+AGG - chr5_2:26010191-26010210 Msa0765320:intron 45.0%
ACTACTATGCCTCATTGTCC+TGG - chr5_2:26010353-26010372 Msa0765320:CDS 45.0%
CACTCACTGCATCAAGATAG+TGG - chr5_2:26010389-26010408 Msa0765320:CDS 45.0%
! ACTGGTTGAACTGGTTGGTT+CGG + chr5_2:26010555-26010574 None:intergenic 45.0%
GTTCAACTGGTTGAACTGGT+TGG + chr5_2:26010560-26010579 None:intergenic 45.0%
ACCAGTTCAACCAGTTGAAC+CGG - chr5_2:26010560-26010579 Msa0765320:intron 45.0%
! TGTTTGGTTTCCGGTTCAAC+TGG + chr5_2:26010573-26010592 None:intergenic 45.0%
!! GTTTTCCTGTTGGTTGATCC+TGG - chr5_2:26010593-26010612 Msa0765320:intron 45.0%
TGTAACCAGGATCAACCAAC+AGG + chr5_2:26010601-26010620 None:intergenic 45.0%
! TGTTTGGTTTCCGGTTGAAC+TGG + chr5_2:26010686-26010705 None:intergenic 45.0%
ACCGGAAACCAAACAGTTTC+CGG - chr5_2:26010691-26010710 Msa0765320:CDS 45.0%
! ACCGGAAACTGTTTGGTTTC+CGG + chr5_2:26010695-26010714 None:intergenic 45.0%
GAAACCAAACAGTTTCCGGT+TGG - chr5_2:26010695-26010714 Msa0765320:CDS 45.0%
TCAACCAACCGGAAACTGTT+TGG + chr5_2:26010702-26010721 None:intergenic 45.0%
! AGTTTCCGGTTGGTTGATCT+TGG - chr5_2:26010705-26010724 Msa0765320:CDS 45.0%
TGCAACCAAGATCAACCAAC+CGG + chr5_2:26010713-26010732 None:intergenic 45.0%
GTTCGGTCAGATTAACCACA+CGG + chr5_2:26010842-26010861 None:intergenic 45.0%
CCATTAAACTGAGGTCTCAC+CGG - chr5_2:26010870-26010889 Msa0765320:intron 45.0%
AACGTATTTACCCAGGAGAC+TGG + chr5_2:26010960-26010979 None:intergenic 45.0%
ACTGAACTCTGCACTTGACA+AGG + chr5_2:26011220-26011239 None:intergenic 45.0%
CATAGGGGTAACTTGAAGAG+GGG + chr5_2:26011244-26011263 None:intergenic 45.0%
GCAGCTAAGGATCTGAACAT+AGG + chr5_2:26011261-26011280 None:intergenic 45.0%
ATGTTCAGATCCTTAGCTGC+GGG - chr5_2:26011261-26011280 Msa0765320:intron 45.0%
TCACGACTAACTACTGCTGT+AGG + chr5_2:26011728-26011747 None:intergenic 45.0%
GGGACAGACAAACACAGAAA+TGG - chr5_2:26011948-26011967 Msa0765320:intron 45.0%
ACTCTAAGCACGCTAACCTT+CGG + chr5_2:26012556-26012575 None:intergenic 45.0%
TCCGATCCAGCATTTGGTAT+TGG - chr5_2:26012624-26012643 Msa0765320:five_prime_UTR 45.0%
!! TATTTATCATATTATTATAA+AGG - chr5_2:26007062-26007081 Msa0765320:three_prime_UTR 5.0%
!!! TTCATATTTAAATTTTATAT+AGG + chr5_2:26008382-26008401 None:intergenic 5.0%
TAGCATGCAACTTGGCTCCT+TGG - chr5_2:26007100-26007119 Msa0765320:three_prime_UTR 50.0%
CATTGTCACGTGGACTCAAG+AGG - chr5_2:26007260-26007279 Msa0765320:intron 50.0%
CTGGTTATCCGGAGTTTGAC+CGG - chr5_2:26008166-26008185 Msa0765320:CDS 50.0%
! TCTTTTCCCTCAGTGAGGGT+AGG - chr5_2:26008433-26008452 Msa0765320:intron 50.0%
TAGCAAAGGTGGTTTCAGGC+AGG - chr5_2:26008753-26008772 Msa0765320:intron 50.0%
!! TTGAACTGGTTGGTTCGGTG+TGG + chr5_2:26010550-26010569 None:intergenic 50.0%
TCCGGTTCAACTGGTTGAAC+TGG + chr5_2:26010564-26010583 None:intergenic 50.0%
!! TTGAACTGGTTGGTTCGGTG+TGG + chr5_2:26010550-26010569 None:intergenic 50.0%
ACCGAACCAACCAGTTCAAC+CGG - chr5_2:26010551-26010570 Msa0765320:CDS 50.0%
! TCCGGTTGAACTGGTTGGTT+CGG + chr5_2:26010677-26010696 None:intergenic 50.0%
TGGTTTCCGGTTGAACTGGT+TGG + chr5_2:26010682-26010701 None:intergenic 50.0%
CCGGTGAGACCTCAGTTTAA+TGG + chr5_2:26010873-26010892 None:intergenic 50.0%
ACTAGGAATTCCCGCAGCTA+AGG + chr5_2:26011274-26011293 None:intergenic 50.0%
GCTATAGCACTGTAGCGTAG+TGG - chr5_2:26011579-26011598 Msa0765320:intron 50.0%
TTGCAATGTGGCGGTTGTGA+GGG + chr5_2:26012274-26012293 None:intergenic 50.0%
TTTGCAATGTGGCGGTTGTG+AGG + chr5_2:26012275-26012294 None:intergenic 50.0%
! AGGGCTCTTTTGCAATGTGG+CGG + chr5_2:26012283-26012302 None:intergenic 50.0%
! AGCAGGGCTCTTTTGCAATG+TGG + chr5_2:26012286-26012305 None:intergenic 50.0%
AGAAGAACGAACACGCGAGA+TGG + chr5_2:26012379-26012398 None:intergenic 50.0%
CGTGTTCGTTCTTCTCATCC+TGG - chr5_2:26012384-26012403 Msa0765320:five_prime_UTR 50.0%
! CAGTGTCTTTTTCCTCCCCT+AGG - chr5_2:26012505-26012524 Msa0765320:five_prime_UTR 50.0%
!! AGGAGCGTCACATTGTCACG+TGG - chr5_2:26007250-26007269 Msa0765320:intron 55.0%
GAAAGGAGGATGGTCACCAG+AGG - chr5_2:26008040-26008059 Msa0765320:intron 55.0%
GAGCTTCAGTGCCTGGAACT+AGG + chr5_2:26008255-26008274 None:intergenic 55.0%
ACCTGGACGGAAGATCGAAC+CGG + chr5_2:26010892-26010911 None:intergenic 55.0%
!! TTGGCGATTGGGTTGAGGGA+TGG + chr5_2:26012250-26012269 None:intergenic 55.0%
! GTTGTGAGGGGTTGGCGATT+GGG + chr5_2:26012261-26012280 None:intergenic 55.0%
TGCAATGTGGCGGTTGTGAG+GGG + chr5_2:26012273-26012292 None:intergenic 55.0%
GACGACTACTATCACGCAGC+AGG + chr5_2:26012673-26012692 None:intergenic 55.0%
!! ACCGGTTCGATCTTCCGTCC+AGG - chr5_2:26010888-26010907 Msa0765320:intron 60.0%
!! GGGGTTGGCGATTGGGTTGA+GGG + chr5_2:26012254-26012273 None:intergenic 60.0%
! AGGGGTTGGCGATTGGGTTG+AGG + chr5_2:26012255-26012274 None:intergenic 60.0%
! GGTTGTGAGGGGTTGGCGAT+TGG + chr5_2:26012262-26012281 None:intergenic 60.0%
ATGTGGCGGTTGTGAGGGGT+TGG + chr5_2:26012269-26012288 None:intergenic 60.0%
GATGGTCGCGGTGAGGAGAA+AGG + chr5_2:26012361-26012380 None:intergenic 60.0%
ACGAACACGCGAGATGGTCG+CGG + chr5_2:26012373-26012392 None:intergenic 60.0%
CACGCGAGATGGTCGCGGTG+AGG + chr5_2:26012368-26012387 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 26006387 26013060 26006387 ID=Msa0765320;Name=Msa0765320
chr5_2 mRNA 26006387 26013060 26006387 ID=Msa0765320-mRNA-1;Parent=Msa0765320;Name=Msa0765320-mRNA-1;_AED=0.05;_eAED=0.05;_QI=799|0.7|0.72|1|0.8|0.72|11|745|437
chr5_2 exon 26006387 26007239 26006387 ID=Msa0765320-mRNA-1:exon:10417;Parent=Msa0765320-mRNA-1
chr5_2 exon 26008136 26008284 26008136 ID=Msa0765320-mRNA-1:exon:10416;Parent=Msa0765320-mRNA-1
chr5_2 exon 26008965 26009149 26008965 ID=Msa0765320-mRNA-1:exon:10415;Parent=Msa0765320-mRNA-1
chr5_2 exon 26009235 26009371 26009235 ID=Msa0765320-mRNA-1:exon:10414;Parent=Msa0765320-mRNA-1
chr5_2 exon 26009517 26009662 26009517 ID=Msa0765320-mRNA-1:exon:10413;Parent=Msa0765320-mRNA-1
chr5_2 exon 26010243 26010414 26010243 ID=Msa0765320-mRNA-1:exon:10412;Parent=Msa0765320-mRNA-1
chr5_2 exon 26010430 26010574 26010430 ID=Msa0765320-mRNA-1:exon:10411;Parent=Msa0765320-mRNA-1
chr5_2 exon 26010673 26010728 26010673 ID=Msa0765320-mRNA-1:exon:10410;Parent=Msa0765320-mRNA-1
chr5_2 exon 26011365 26011437 26011365 ID=Msa0765320-mRNA-1:exon:10409;Parent=Msa0765320-mRNA-1
chr5_2 exon 26011950 26011996 26011950 ID=Msa0765320-mRNA-1:exon:10408;Parent=Msa0765320-mRNA-1
chr5_2 exon 26012166 26013060 26012166 ID=Msa0765320-mRNA-1:exon:10407;Parent=Msa0765320-mRNA-1
chr5_2 five_prime_UTR 26012262 26013060 26012262 ID=Msa0765320-mRNA-1:five_prime_utr;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26012166 26012261 26012166 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26011950 26011996 26011950 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26011365 26011437 26011365 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26010673 26010728 26010673 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26010430 26010574 26010430 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26010243 26010414 26010243 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26009517 26009662 26009517 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26009235 26009371 26009235 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26008965 26009149 26008965 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26008136 26008284 26008136 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 CDS 26007132 26007239 26007132 ID=Msa0765320-mRNA-1:cds;Parent=Msa0765320-mRNA-1
chr5_2 three_prime_UTR 26006387 26007131 26006387 ID=Msa0765320-mRNA-1:three_prime_utr;Parent=Msa0765320-mRNA-1
Gene Sequence

>Msa0765320

ATGCAACAAGATCATATGAAGAAGCAGAAGCAGAAGCAGCTTCTTAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTCACGTGGACTCAAGAGGAGGATGATATATTGAGGGATCAAATTGGAATCCATGGAACTGAAAAATGGTACACTTATTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGATATGCTCTTATGTGAGGCTCAAAAAATATTTGGAAATAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAACGCCGTGAAAAACCGTTTCTCCACATTGTGCAAAAAGAGAGCTAAATATGAAGCCTTAGCAAAAGAAAACAACATTTCATACACGAATTCAAATAACAAAAGGATTATTTTCCGAGATGAAGCATCAGAATCTGCCATGAGGAGGTCACATATCCCTGATGATGCAGAAAAGATCAGCTTCGCAGACAGATCACATAAACAAAATGAAACTTCAAGAGCCCCATTGGCAGTTTTAGCTCAAAACTCTCACAATGCCAATAACTTGCCAGACCAGAATCATGTCTGCAATGTGAAGTTTAGTGATTATGCTCAAAACAACAAGATTCAAGGAACATTCCTTAAAAAGGATGATCCAAAGATAAATGCGTTGATGCAACAAGCCGAGCTACTAACTTCGCTAGCTCTAAAAGTTGATGCAGAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGATTCTTCAAGAGTTTATGAACCGAAACAAAGAATCAGATGTTTCTGGATATAAGATTCCAGATTTACAGCTTGTAGATCTTAAAGATTTATTGGAAGACTTGAAGAATAATAGTGAGGAAATTCAGCCATGTTGGAGGTATATGGAATTTTATGAAGACTCTCCAGAAAGTTCTGAACACAGTACAGGATCAACTACTATGCCTCATTGTCCTGGTGAGAATTTAGAACACTCACTGCATCAAGATAGTGGAACTGAACTCAAGTCTATACAAATTGAACATCAAAAGGAAATTGGAATATGTGATCAAGTGATTCTTTCTAAAGATATATTCTCATCTTGTGAAGAACAGATAAACAATGATGGCATTGTTTGTTCCTTGTCAAGTGCAGAGTTCAGTTCCCCTCTTCAAGTTACCCCTATGTTCAGATCCTTAGCTGCGGGAATTCCTAGTCCACAATTTTCAGAAAGTGAAAGGAACTTCCTGATGAAAACACTTGGAATGGATTCTCCATCCCTCAACCCAATCGCCAACCCCTCACAACCGCCACATTGCAAAAGAGCCCTGCTACAAAGTTAA
Protein sequence

>Msa0765320

MQQDHMKKQKQKQLLNEESKKKERHIVTWTQEEDDILRDQIGIHGTEKWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNISYTNSNNKRIIFRDEASESAMRRSHIPDDAEKISFADRSHKQNETSRAPLAVLAQNSHNANNLPDQNHVCNVKFSDYAQNNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKILQEFMNRNKESDVSGYKIPDLQLVDLKDLLEDLKNNSEEIQPCWRYMEFYEDSPESSEHSTGSTTMPHCPGENLEHSLHQDSGTELKSIQIEHQKEIGICDQVILSKDIFSSCEEQINNDGIVCSLSSAEFSSPLQVTPMFRSLAAGIPSPQFSESERNFLMKTLGMDSPSLNPIANPSQPPHCKRALLQS*