Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767050 | sp|Q8GXU8|LPAT1_ARATH | 67.041 | 267 | 81 | 3 | 75 | 338 | 92 | 354 | 7.05e-129 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767050 | G7JXV9 | 91.765 | 340 | 20 | 3 | 1 | 340 | 1 | 332 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0766940 | Msa0767050 | 0.851536 | 8.324424e-61 | -8.615850e-47 |
| Msa0767050 | Msa0846850 | 0.861838 | 7.740909e-64 | -8.615850e-47 |
| Msa0480040 | Msa0767050 | 0.801086 | 1.062784e-48 | -8.615850e-47 |
| Msa0261660 | Msa0767050 | 0.808135 | 3.593092e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767050 | MtrunA17_Chr5g0418531 | 91.765 | 340 | 20 | 3 | 1 | 340 | 1 | 332 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767050 | AT4G30580.1 | 67.041 | 267 | 81 | 3 | 75 | 338 | 92 | 354 | 7.17e-130 | 375 |
Find 125 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACATTTCTTTGCTTATTT+TGG | 0.064584 | 5_2:+29573521 | None:intergenic |
| TCCACACAAGTCGTTGAATT+TGG | 0.150006 | 5_2:+29573480 | None:intergenic |
| TCCCTTCCAGCTGGCATGAT+TGG | 0.152628 | 5_2:+29571661 | None:intergenic |
| CTTAATTGCCTCTTCTTCTA+TGG | 0.199821 | 5_2:+29573945 | None:intergenic |
| TCGTTCGATATTAATGTAAT+AGG | 0.217215 | 5_2:+29571489 | None:intergenic |
| AGATACTAATTGTCCTTAAC+TGG | 0.236482 | 5_2:+29571437 | None:intergenic |
| CCCAACCAATTATCGGAAAA+AGG | 0.254352 | 5_2:+29572999 | None:intergenic |
| TGTTCCGCGTAATCCAATTC+TGG | 0.255579 | 5_2:+29573790 | None:intergenic |
| GTTGTACCAATCACCCTTAT+TGG | 0.257776 | 5_2:-29571691 | Msa0767050:CDS |
| TGAAACAATTGCAGAATAAA+AGG | 0.278366 | 5_2:+29573880 | None:intergenic |
| CCCTTCCAGCTGGCATGATT+GGG | 0.279310 | 5_2:+29571662 | None:intergenic |
| ACATAGACGGCGGGAGTATC+TGG | 0.286390 | 5_2:+29573106 | None:intergenic |
| TCATTCTTTGTCAGTCATAT+TGG | 0.297175 | 5_2:-29571129 | Msa0767050:three_prime_UTR |
| CGCACTAAAGATGGAAAATT+AGG | 0.298606 | 5_2:-29572760 | Msa0767050:CDS |
| TGGTTGGGCAATGTTTCTTT+TGG | 0.301779 | 5_2:-29572984 | Msa0767050:CDS |
| AACGAATTTGAAGGGTAAAA+TGG | 0.305909 | 5_2:-29571471 | Msa0767050:three_prime_UTR |
| GGTTAGTTGGATTGTATCTA+TGG | 0.311817 | 5_2:+29573917 | None:intergenic |
| TGGGAATATGCAAACTAAAA+TGG | 0.311857 | 5_2:-29570973 | Msa0767050:three_prime_UTR |
| TGTGGAACTGGAACTGGAAT+TGG | 0.321391 | 5_2:-29573463 | Msa0767050:CDS |
| CCACACAAGTCGTTGAATTT+GGG | 0.325398 | 5_2:+29573481 | None:intergenic |
| ATTACTTTGTCGCGAAACTC+TGG | 0.334042 | 5_2:-29573192 | Msa0767050:CDS |
| TTTAAATTTATAAGTAAGAC+TGG | 0.335747 | 5_2:-29573028 | Msa0767050:CDS |
| ATGATAAATCAGCCTGTTTA+CGG | 0.336770 | 5_2:-29570781 | Msa0767050:three_prime_UTR |
| TGATTGGGCCAGTTCCAATA+AGG | 0.339469 | 5_2:+29571677 | None:intergenic |
| TTTAATGTTCTCTTGCTAAT+GGG | 0.341490 | 5_2:+29570863 | None:intergenic |
| GGCTGGCTCTTTCCCAGTTA+AGG | 0.354418 | 5_2:-29571450 | Msa0767050:three_prime_UTR |
| ATTTAAAGACAGGATAAAAC+TGG | 0.359279 | 5_2:+29573991 | None:intergenic |
| GACTTGTGTGGAACTGGAAC+TGG | 0.361673 | 5_2:-29573469 | Msa0767050:CDS |
| AACATTGCCCAACCAATTAT+CGG | 0.364019 | 5_2:+29572992 | None:intergenic |
| CAAAATTGAATACCAAGGTT+TGG | 0.366202 | 5_2:-29573143 | Msa0767050:CDS |
| ATCTCAGTTTCATGCCTTTG+TGG | 0.369954 | 5_2:-29570911 | Msa0767050:three_prime_UTR |
| TCTCGCCAACAACCCAGAAT+TGG | 0.370143 | 5_2:-29573803 | Msa0767050:CDS |
| CAATTTGTTGTAACAGAAAC+GGG | 0.371977 | 5_2:+29573435 | None:intergenic |
| ATCTAGAAAACTCTGATGAT+TGG | 0.382445 | 5_2:+29573081 | None:intergenic |
| TCAGCATCATTTCCATCTAT+AGG | 0.384241 | 5_2:+29571595 | None:intergenic |
| TTCAACGACTTGTGTGGAAC+TGG | 0.388456 | 5_2:-29573475 | Msa0767050:CDS |
| AACATTCACATGCCGTAAAC+AGG | 0.391123 | 5_2:+29570769 | None:intergenic |
| ACAGGATAAAACTGGATTGC+GGG | 0.404194 | 5_2:+29573999 | None:intergenic |
| ATTGCAGAATAAAAGGTAAA+CGG | 0.406600 | 5_2:+29573887 | None:intergenic |
| TGGAAAATTAGGTGCATTCA+AGG | 0.408568 | 5_2:-29572749 | Msa0767050:intron |
| CATTTCTAAGTTCCAACACT+TGG | 0.414831 | 5_2:+29570946 | None:intergenic |
| TCTTTAGTGCGTGTTCCCTC+CGG | 0.425047 | 5_2:+29572772 | None:intergenic |
| GCATAAATAAACTGCTTAGC+AGG | 0.425620 | 5_2:-29570819 | Msa0767050:three_prime_UTR |
| ATTTGGGTTCAAGTATTGAA+TGG | 0.431128 | 5_2:+29573341 | None:intergenic |
| CCAATCACCCTTATTGGAAC+TGG | 0.434071 | 5_2:-29571685 | Msa0767050:CDS |
| GTTATACATAAACCTATAGA+TGG | 0.435849 | 5_2:-29571607 | Msa0767050:CDS |
| TCAATTTGTTGTAACAGAAA+CGG | 0.436103 | 5_2:+29573434 | None:intergenic |
| TATGAGATTACTGCTGCAAC+AGG | 0.436954 | 5_2:-29573379 | Msa0767050:CDS |
| CCAAATTCGAAGCAAAACTT+AGG | 0.437800 | 5_2:-29573324 | Msa0767050:CDS |
| CCCAATCATGCCAGCTGGAA+GGG | 0.446600 | 5_2:-29571662 | Msa0767050:CDS |
| CAAAGTAATGAAACTTTCTT+CGG | 0.450888 | 5_2:+29573206 | None:intergenic |
| GTAATCCAATTCTGGGTTGT+TGG | 0.451811 | 5_2:+29573798 | None:intergenic |
| CGGCTGTCCATGCGCTTCAA+AGG | 0.453922 | 5_2:+29572953 | None:intergenic |
| TTTATGTATAACAACTTTCA+CGG | 0.455862 | 5_2:+29571618 | None:intergenic |
| AAACGGGAAAGAAGGTTAGT+TGG | 0.455879 | 5_2:+29573904 | None:intergenic |
| TCTCAGTTTCATGCCTTTGT+GGG | 0.457118 | 5_2:-29570910 | Msa0767050:three_prime_UTR |
| TTGCAGAATAAAAGGTAAAC+GGG | 0.457813 | 5_2:+29573888 | None:intergenic |
| CAAGTGTTGGAACTTAGAAA+TGG | 0.458512 | 5_2:-29570945 | Msa0767050:three_prime_UTR |
| GTTCCGCGTAATCCAATTCT+GGG | 0.460240 | 5_2:+29573791 | None:intergenic |
| GTCGTTGAATTTGGGAGTAA+AGG | 0.464488 | 5_2:+29573489 | None:intergenic |
| ATAAGGGTGATTGGTACAAC+TGG | 0.467577 | 5_2:+29571694 | None:intergenic |
| TTTGGGTTCAAGTATTGAAT+GGG | 0.474415 | 5_2:+29573342 | None:intergenic |
| CACAGTAAATCGACGCTTTG+AGG | 0.475380 | 5_2:+29571038 | None:intergenic |
| ATGTATAGGACTGTCTTAAA+CGG | 0.483192 | 5_2:-29572837 | Msa0767050:intron |
| GAATTAAATGAGAGTGGGAA+TGG | 0.484908 | 5_2:-29570993 | Msa0767050:three_prime_UTR |
| TCTCTTGCAGTACATTTGTC+AGG | 0.484983 | 5_2:+29571522 | None:intergenic |
| CCAGTTCCAATAAGGGTGAT+TGG | 0.489847 | 5_2:+29571685 | None:intergenic |
| CTTTAGTGCGTGTTCCCTCC+GGG | 0.491385 | 5_2:+29572773 | None:intergenic |
| CTCTCATTTAATTCTTCTGT+AGG | 0.491475 | 5_2:+29571002 | None:intergenic |
| TCTCATTTAATTCTTCTGTA+GGG | 0.493276 | 5_2:+29571003 | None:intergenic |
| AGGGAGGGTATATTGAACTT+AGG | 0.500285 | 5_2:-29571643 | Msa0767050:CDS |
| GAGGGAACACGCACTAAAGA+TGG | 0.501444 | 5_2:-29572769 | Msa0767050:CDS |
| CTATCAACGAGAAGTACAAA+TGG | 0.503088 | 5_2:+29573232 | None:intergenic |
| CTTCAGTCTTGTGTGCGGAT+TGG | 0.503814 | 5_2:-29571308 | Msa0767050:three_prime_UTR |
| TAAAAGGTAAACGGGAAAGA+AGG | 0.504754 | 5_2:+29573896 | None:intergenic |
| CAAATTCGAAGCAAAACTTA+GGG | 0.510545 | 5_2:-29573323 | Msa0767050:CDS |
| AATTAAATGAGAGTGGGAAT+GGG | 0.516656 | 5_2:-29570992 | Msa0767050:three_prime_UTR |
| TAGAGACAACGATGATGGAT+TGG | 0.518714 | 5_2:+29573836 | None:intergenic |
| GATTGGGCCAGTTCCAATAA+GGG | 0.518993 | 5_2:+29571678 | None:intergenic |
| TTACTTTGTCGCGAAACTCT+GGG | 0.522267 | 5_2:-29573191 | Msa0767050:CDS |
| CAACGATTCCATAGAAGAAG+AGG | 0.525945 | 5_2:-29573953 | Msa0767050:five_prime_UTR |
| TTAATATCGAACGAATTTGA+AGG | 0.527235 | 5_2:-29571480 | Msa0767050:three_prime_UTR |
| TGTAATTCCTTTGAAGCGCA+TGG | 0.527397 | 5_2:-29572960 | Msa0767050:CDS |
| AGAGATAGAGACAACGATGA+TGG | 0.529836 | 5_2:+29573831 | None:intergenic |
| GCATACTTACCATCTGGCTT+CGG | 0.532312 | 5_2:+29572933 | None:intergenic |
| CTTATAACAGTGAGGAAATG+TGG | 0.535600 | 5_2:+29571345 | None:intergenic |
| GCCCAATCATGCCAGCTGGA+AGG | 0.541482 | 5_2:-29571663 | Msa0767050:CDS |
| GCAGTCATAAGTTGTTTCAT+CGG | 0.542355 | 5_2:-29571228 | Msa0767050:three_prime_UTR |
| CCCAAATTCAACGACTTGTG+TGG | 0.542928 | 5_2:-29573481 | Msa0767050:CDS |
| AATATACCCTCCCTTCCAGC+TGG | 0.546146 | 5_2:+29571652 | None:intergenic |
| AATTTGAAGGGTAAAATGGC+TGG | 0.549548 | 5_2:-29571467 | Msa0767050:three_prime_UTR |
| ATATATACTCTTCTTACTCT+CGG | 0.551443 | 5_2:-29573058 | Msa0767050:CDS |
| ACAGAAGAATTAAATGAGAG+TGG | 0.551681 | 5_2:-29570999 | Msa0767050:three_prime_UTR |
| ACTGGCCCAATCATGCCAGC+TGG | 0.554209 | 5_2:-29571667 | Msa0767050:CDS |
| GATTGGAGAAGCAACTTCCA+TGG | 0.555134 | 5_2:+29573853 | None:intergenic |
| TTGATTGATATTGAAGCACC+AGG | 0.556577 | 5_2:-29571199 | Msa0767050:three_prime_UTR |
| TAATATCGAACGAATTTGAA+GGG | 0.561383 | 5_2:-29571479 | Msa0767050:three_prime_UTR |
| ACATGCTATGCAAAGAAGCT+AGG | 0.561771 | 5_2:-29571573 | Msa0767050:CDS |
| TCTAAGTTCCAACACTTGGA+CGG | 0.563767 | 5_2:+29570950 | None:intergenic |
| TAAAATGGCCGTCCAAGTGT+TGG | 0.566789 | 5_2:-29570958 | Msa0767050:three_prime_UTR |
| CTCAGTTTCATGCCTTTGTG+GGG | 0.569807 | 5_2:-29570909 | Msa0767050:three_prime_UTR |
| ATTACTGCTGCAACAGGAGA+CGG | 0.572685 | 5_2:-29573373 | Msa0767050:CDS |
| CATGGACAGCCGAAGCCAGA+TGG | 0.578811 | 5_2:-29572942 | Msa0767050:intron |
| ATCATGCCAGCTGGAAGGGA+GGG | 0.582798 | 5_2:-29571658 | Msa0767050:CDS |
| ACAACTTATGACTGCACTAG+AGG | 0.588669 | 5_2:+29571236 | None:intergenic |
| GACAGGATAAAACTGGATTG+CGG | 0.589419 | 5_2:+29573998 | None:intergenic |
| ATGGTAGATTCTCCAAACCT+TGG | 0.591226 | 5_2:+29573131 | None:intergenic |
| CAGAAGAATTAAATGAGAGT+GGG | 0.595284 | 5_2:-29570998 | Msa0767050:three_prime_UTR |
| CAACCCAGAATTGGATTACG+CGG | 0.595300 | 5_2:-29573794 | Msa0767050:CDS |
| TTGCACTTCAGTCTTGTGTG+CGG | 0.604499 | 5_2:-29571313 | Msa0767050:three_prime_UTR |
| AATCATGCCAGCTGGAAGGG+AGG | 0.609229 | 5_2:-29571659 | Msa0767050:CDS |
| TTAGTACTATGGAGAAATGG+AGG | 0.620062 | 5_2:-29571088 | Msa0767050:three_prime_UTR |
| TGATTGGAAACATAGACGGC+GGG | 0.620368 | 5_2:+29573097 | None:intergenic |
| TTAAATTTATAAGTAAGACT+GGG | 0.621524 | 5_2:-29573027 | Msa0767050:CDS |
| CTGATGATTGGAAACATAGA+CGG | 0.622115 | 5_2:+29573093 | None:intergenic |
| ACGGCGGGAGTATCTGGAGA+TGG | 0.622338 | 5_2:+29573112 | None:intergenic |
| TGAGTAACGTTTCCCCACAA+AGG | 0.623114 | 5_2:+29570897 | None:intergenic |
| ATAAGCAAAGAAATGTGTTG+AGG | 0.633011 | 5_2:-29573516 | Msa0767050:CDS |
| GATACTAATTGTCCTTAACT+GGG | 0.640484 | 5_2:+29571438 | None:intergenic |
| AAACTCATAGCTAGTACACC+TGG | 0.643727 | 5_2:+29571181 | None:intergenic |
| GTACTAAAAGAACAACGTTG+AGG | 0.663857 | 5_2:+29571104 | None:intergenic |
| ATGATTGGAAACATAGACGG+CGG | 0.672168 | 5_2:+29573096 | None:intergenic |
| ATTGTGATCTTATAACAGTG+AGG | 0.690159 | 5_2:+29571337 | None:intergenic |
| AAATTCGAAGCAAAACTTAG+GGG | 0.693453 | 5_2:-29573322 | Msa0767050:CDS |
| ATCTTACAATGACATCTCTG+CGG | 0.702894 | 5_2:+29573401 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTTCAAAATTTTAT+CGG | + | chr5_2:29572363-29572382 | None:intergenic | 10.0% |
| !! | TTTAAATTTATAAGTAAGAC+TGG | - | chr5_2:29571752-29571771 | Msa0767050:intron | 15.0% |
| !! | TTAAATTTATAAGTAAGACT+GGG | - | chr5_2:29571753-29571772 | Msa0767050:intron | 15.0% |
| !!! | ATTTTCTACTAGAAATAAAT+AGG | + | chr5_2:29572979-29572998 | None:intergenic | 15.0% |
| !!! | AGAAAATTTTGGTATTTTAT+AGG | - | chr5_2:29573373-29573392 | Msa0767050:CDS | 15.0% |
| !!! | ATGTTTTTACATTTAAAGAC+AGG | + | chr5_2:29570802-29570821 | None:intergenic | 20.0% |
| !! | TGTCTTTAAATGTAAAAACA+TGG | - | chr5_2:29570801-29570820 | Msa0767050:three_prime_UTR | 20.0% |
| !!! | TGGTTTTATCAAATTAATAG+TGG | + | chr5_2:29571086-29571105 | None:intergenic | 20.0% |
| !! | AAAAAGAAATATAGCAGAAA+TGG | + | chr5_2:29571507-29571526 | None:intergenic | 20.0% |
| !!! | TGGTATTCAATTTTGAAAAA+CGG | + | chr5_2:29571632-29571651 | None:intergenic | 20.0% |
| !!! | TTTTTCAAAATTGAATACCA+AGG | - | chr5_2:29571632-29571651 | Msa0767050:CDS | 20.0% |
| !! | ACGAATAAGTTGTTAAAATT+AGG | + | chr5_2:29571910-29571929 | None:intergenic | 20.0% |
| !! | TTATTTATATGTTGTTGAGA+CGG | - | chr5_2:29572137-29572156 | Msa0767050:intron | 20.0% |
| !!! | TCTAGCACATATTAAATTTT+AGG | - | chr5_2:29572829-29572848 | Msa0767050:CDS | 20.0% |
| !! | TTTATGTATAACAACTTTCA+CGG | + | chr5_2:29573165-29573184 | None:intergenic | 20.0% |
| !!! | ATCTTTTAGCAAGAAAATTT+TGG | - | chr5_2:29573362-29573381 | Msa0767050:CDS | 20.0% |
| ! | ATTTAAAGACAGGATAAAAC+TGG | + | chr5_2:29570792-29570811 | None:intergenic | 25.0% |
| ! | ATTGCAGAATAAAAGGTAAA+CGG | + | chr5_2:29570896-29570915 | None:intergenic | 25.0% |
| ! | TGAAACAATTGCAGAATAAA+AGG | + | chr5_2:29570903-29570922 | None:intergenic | 25.0% |
| !!! | TTCTTTCAATTTTTGAAGCA+TGG | - | chr5_2:29571037-29571056 | Msa0767050:three_prime_UTR | 25.0% |
| ! | TATCAAATTAATAGTGGTGT+CGG | + | chr5_2:29571080-29571099 | None:intergenic | 25.0% |
| ! | TATAATTACACTGAATAACG+TGG | + | chr5_2:29571106-29571125 | None:intergenic | 25.0% |
| !! | ACACATTTCTTTGCTTATTT+TGG | + | chr5_2:29571262-29571281 | None:intergenic | 25.0% |
| !!! | TCAATTTGTTGTAACAGAAA+CGG | + | chr5_2:29571349-29571368 | None:intergenic | 25.0% |
| ! | CAAAGTAATGAAACTTTCTT+CGG | + | chr5_2:29571577-29571596 | None:intergenic | 25.0% |
| ! | ATATATACTCTTCTTACTCT+CGG | - | chr5_2:29571722-29571741 | Msa0767050:CDS | 25.0% |
| !! | ATATTCCTTTTTCCGATAAT+TGG | - | chr5_2:29571776-29571795 | Msa0767050:intron | 25.0% |
| ! | GGTGCAAAAAAAAAAAACAA+TGG | + | chr5_2:29571889-29571908 | None:intergenic | 25.0% |
| ! | TTAAATGCTTCTTCATGTAT+AGG | - | chr5_2:29571929-29571948 | Msa0767050:intron | 25.0% |
| ! | TTATCTTATCTACTCTACAA+AGG | + | chr5_2:29572081-29572100 | None:intergenic | 25.0% |
| ! | AGATTGTCCTATATTTCATA+TGG | + | chr5_2:29572453-29572472 | None:intergenic | 25.0% |
| ! | ATATAGGACAATCTTTCATA+TGG | - | chr5_2:29572459-29572478 | Msa0767050:intron | 25.0% |
| ! | CTTAAATCAATGATAACAGA+CGG | + | chr5_2:29572535-29572554 | None:intergenic | 25.0% |
| ! | TGTCAAATTAACACACATAT+AGG | - | chr5_2:29572860-29572879 | Msa0767050:intron | 25.0% |
| ! | GTCAAATTAACACACATATA+GGG | - | chr5_2:29572861-29572880 | Msa0767050:intron | 25.0% |
| ! | GTTATACATAAACCTATAGA+TGG | - | chr5_2:29573173-29573192 | Msa0767050:CDS | 25.0% |
| ! | TCGTTCGATATTAATGTAAT+AGG | + | chr5_2:29573294-29573313 | None:intergenic | 25.0% |
| ! | TTAATATCGAACGAATTTGA+AGG | - | chr5_2:29573300-29573319 | Msa0767050:CDS | 25.0% |
| ! | TAATATCGAACGAATTTGAA+GGG | - | chr5_2:29573301-29573320 | Msa0767050:CDS | 25.0% |
| ! | TCTCATTTAATTCTTCTGTA+GGG | + | chr5_2:29573780-29573799 | None:intergenic | 25.0% |
| ! | TTTAATGTTCTCTTGCTAAT+GGG | + | chr5_2:29573920-29573939 | None:intergenic | 25.0% |
| !! | TTTTAATGTTCTCTTGCTAA+TGG | + | chr5_2:29573921-29573940 | None:intergenic | 25.0% |
| TTGCAGAATAAAAGGTAAAC+GGG | + | chr5_2:29570895-29570914 | None:intergenic | 30.0% | |
| ! | TGCAATTGTTTCATTTTCCA+TGG | - | chr5_2:29570910-29570929 | Msa0767050:three_prime_UTR | 30.0% |
| AAGAATCACTTACCGAAAAA+AGG | + | chr5_2:29571022-29571041 | None:intergenic | 30.0% | |
| ATAAGCAAAGAAATGTGTTG+AGG | - | chr5_2:29571264-29571283 | Msa0767050:three_prime_UTR | 30.0% | |
| !! | CAATTTGTTGTAACAGAAAC+GGG | + | chr5_2:29571348-29571367 | None:intergenic | 30.0% |
| !! | TTTGGGTTCAAGTATTGAAT+GGG | + | chr5_2:29571441-29571460 | None:intergenic | 30.0% |
| !! | ATTTGGGTTCAAGTATTGAA+TGG | + | chr5_2:29571442-29571461 | None:intergenic | 30.0% |
| ! | CTAAGTTTTGCTTCGAATTT+GGG | + | chr5_2:29571458-29571477 | None:intergenic | 30.0% |
| CAAATTCGAAGCAAAACTTA+GGG | - | chr5_2:29571457-29571476 | Msa0767050:three_prime_UTR | 30.0% | |
| AAATTCGAAGCAAAACTTAG+GGG | - | chr5_2:29571458-29571477 | Msa0767050:three_prime_UTR | 30.0% | |
| CAAAATTGAATACCAAGGTT+TGG | - | chr5_2:29571637-29571656 | Msa0767050:CDS | 30.0% | |
| ATCTAGAAAACTCTGATGAT+TGG | + | chr5_2:29571702-29571721 | None:intergenic | 30.0% | |
| ATGTATAGGACTGTCTTAAA+CGG | - | chr5_2:29571943-29571962 | Msa0767050:intron | 30.0% | |
| TAGAGTAGATAAGATAATCG+TGG | - | chr5_2:29572084-29572103 | Msa0767050:intron | 30.0% | |
| ATGAAAAATAGCACATAACC+TGG | - | chr5_2:29572163-29572182 | Msa0767050:intron | 30.0% | |
| !! | CCTTCGACTATAATTTTGAT+AGG | + | chr5_2:29572224-29572243 | None:intergenic | 30.0% |
| CCTATCAAAATTATAGTCGA+AGG | - | chr5_2:29572221-29572240 | Msa0767050:intron | 30.0% | |
| TGTGTCCTATTTATGAAGAA+CGG | - | chr5_2:29572302-29572321 | Msa0767050:intron | 30.0% | |
| ! | GAAGTGTCCATATGAAATAT+AGG | - | chr5_2:29572443-29572462 | Msa0767050:intron | 30.0% |
| ! | TGTCATGTTTGTCATGATTT+TGG | - | chr5_2:29572498-29572517 | Msa0767050:intron | 30.0% |
| ! | GTCATGTTTGTCATGATTTT+GGG | - | chr5_2:29572499-29572518 | Msa0767050:intron | 30.0% |
| !! | CTGAATATTTTGTGAGTTGA+AGG | + | chr5_2:29572727-29572746 | None:intergenic | 30.0% |
| ! | ATGTGTGTTAATTTGACAGT+TGG | + | chr5_2:29572858-29572877 | None:intergenic | 30.0% |
| GACGATAATTAAACCTACAT+AGG | - | chr5_2:29572883-29572902 | Msa0767050:intron | 30.0% | |
| !!! | TGTCAACTTTTATTTTCCTC+TGG | - | chr5_2:29573017-29573036 | Msa0767050:CDS | 30.0% |
| !!! | GTCAACTTTTATTTTCCTCT+GGG | - | chr5_2:29573018-29573037 | Msa0767050:CDS | 30.0% |
| !!! | TCAACTTTTATTTTCCTCTG+GGG | - | chr5_2:29573019-29573038 | Msa0767050:CDS | 30.0% |
| AACGAATTTGAAGGGTAAAA+TGG | - | chr5_2:29573309-29573328 | Msa0767050:CDS | 30.0% | |
| GATACTAATTGTCCTTAACT+GGG | + | chr5_2:29573345-29573364 | None:intergenic | 30.0% | |
| AGATACTAATTGTCCTTAAC+TGG | + | chr5_2:29573346-29573365 | None:intergenic | 30.0% | |
| ATTGTGATCTTATAACAGTG+AGG | + | chr5_2:29573446-29573465 | None:intergenic | 30.0% | |
| TCATTCTTTGTCAGTCATAT+TGG | - | chr5_2:29573651-29573670 | Msa0767050:intron | 30.0% | |
| ! | ACGTTGTTCTTTTAGTACTA+TGG | - | chr5_2:29573681-29573700 | Msa0767050:intron | 30.0% |
| ! | CTTTTAGTACTATGGAGAAA+TGG | - | chr5_2:29573689-29573708 | Msa0767050:intron | 30.0% |
| CTCTCATTTAATTCTTCTGT+AGG | + | chr5_2:29573781-29573800 | None:intergenic | 30.0% | |
| ACAGAAGAATTAAATGAGAG+TGG | - | chr5_2:29573781-29573800 | Msa0767050:CDS | 30.0% | |
| CAGAAGAATTAAATGAGAGT+GGG | - | chr5_2:29573782-29573801 | Msa0767050:CDS | 30.0% | |
| AATTAAATGAGAGTGGGAAT+GGG | - | chr5_2:29573788-29573807 | Msa0767050:CDS | 30.0% | |
| TGGGAATATGCAAACTAAAA+TGG | - | chr5_2:29573807-29573826 | Msa0767050:CDS | 30.0% | |
| CTTAATTGCCTCTTCTTCTA+TGG | + | chr5_2:29570838-29570857 | None:intergenic | 35.0% | |
| ! | GGTTAGTTGGATTGTATCTA+TGG | + | chr5_2:29570866-29570885 | None:intergenic | 35.0% |
| TAAAAGGTAAACGGGAAAGA+AGG | + | chr5_2:29570887-29570906 | None:intergenic | 35.0% | |
| AATCACTTACCGAAAAAAGG+AGG | + | chr5_2:29571019-29571038 | None:intergenic | 35.0% | |
| ATCTTACAATGACATCTCTG+CGG | + | chr5_2:29571382-29571401 | None:intergenic | 35.0% | |
| ! | CCTAAGTTTTGCTTCGAATT+TGG | + | chr5_2:29571459-29571478 | None:intergenic | 35.0% |
| CCAAATTCGAAGCAAAACTT+AGG | - | chr5_2:29571456-29571475 | Msa0767050:three_prime_UTR | 35.0% | |
| ! | CTTTTTATCTTCATGCTGCT+TGG | - | chr5_2:29571521-29571540 | Msa0767050:exon | 35.0% |
| ! | CTATCAACGAGAAGTACAAA+TGG | + | chr5_2:29571551-29571570 | None:intergenic | 35.0% |
| CTGATGATTGGAAACATAGA+CGG | + | chr5_2:29571690-29571709 | None:intergenic | 35.0% | |
| ! | TCCTTTTTCCGATAATTGGT+TGG | - | chr5_2:29571780-29571799 | Msa0767050:intron | 35.0% |
| ! | CCTTTTTCCGATAATTGGTT+GGG | - | chr5_2:29571781-29571800 | Msa0767050:intron | 35.0% |
| AACATTGCCCAACCAATTAT+CGG | + | chr5_2:29571791-29571810 | None:intergenic | 35.0% | |
| ! | TGCATCGATCTGATCAAAAA+AGG | - | chr5_2:29571966-29571985 | Msa0767050:intron | 35.0% |
| CGCACTAAAGATGGAAAATT+AGG | - | chr5_2:29572020-29572039 | Msa0767050:intron | 35.0% | |
| TGGAAAATTAGGTGCATTCA+AGG | - | chr5_2:29572031-29572050 | Msa0767050:intron | 35.0% | |
| TATTTATGAAGAACGGACAC+CGG | - | chr5_2:29572309-29572328 | Msa0767050:intron | 35.0% | |
| CAATGTAATCTCACAAGTGT+CGG | - | chr5_2:29572391-29572410 | Msa0767050:intron | 35.0% | |
| ATATGGACACTTCTAATCGA+AGG | + | chr5_2:29572436-29572455 | None:intergenic | 35.0% | |
| CTCTAATCAGTCACAATAGT+CGG | - | chr5_2:29572578-29572597 | Msa0767050:intron | 35.0% | |
| TCTAATCAGTCACAATAGTC+GGG | - | chr5_2:29572579-29572598 | Msa0767050:intron | 35.0% | |
| TACTCCATTCAATCTGGTAT+TGG | - | chr5_2:29572603-29572622 | Msa0767050:intron | 35.0% | |
| GTTACCAATACCAGATTGAA+TGG | + | chr5_2:29572610-29572629 | None:intergenic | 35.0% | |
| ATTCAGCAAATCTCTCTTTG+AGG | - | chr5_2:29572741-29572760 | Msa0767050:intron | 35.0% | |
| TTCAGCAAATCTCTCTTTGA+GGG | - | chr5_2:29572742-29572761 | Msa0767050:intron | 35.0% | |
| GACCAGATAATTATTGGCAA+TGG | - | chr5_2:29572769-29572788 | Msa0767050:CDS | 35.0% | |
| TGCCATTGCCAATAATTATC+TGG | + | chr5_2:29572774-29572793 | None:intergenic | 35.0% | |
| TCAGCATCATTTCCATCTAT+AGG | + | chr5_2:29573188-29573207 | None:intergenic | 35.0% | |
| AATTTGAAGGGTAAAATGGC+TGG | - | chr5_2:29573313-29573332 | Msa0767050:CDS | 35.0% | |
| ! | GGTATTTTATAGGTCAACTG+TGG | - | chr5_2:29573383-29573402 | Msa0767050:CDS | 35.0% |
| CTTATAACAGTGAGGAAATG+TGG | + | chr5_2:29573438-29573457 | None:intergenic | 35.0% | |
| !!! | TGCGGATTGGAATTTTTCTT+TGG | - | chr5_2:29573485-29573504 | Msa0767050:CDS | 35.0% |
| ! | GCAGTCATAAGTTGTTTCAT+CGG | - | chr5_2:29573552-29573571 | Msa0767050:intron | 35.0% |
| ! | TTGATTGATATTGAAGCACC+AGG | - | chr5_2:29573581-29573600 | Msa0767050:intron | 35.0% |
| GTACTAAAAGAACAACGTTG+AGG | + | chr5_2:29573679-29573698 | None:intergenic | 35.0% | |
| TTAGTACTATGGAGAAATGG+AGG | - | chr5_2:29573692-29573711 | Msa0767050:intron | 35.0% | |
| GAATTAAATGAGAGTGGGAA+TGG | - | chr5_2:29573787-29573806 | Msa0767050:CDS | 35.0% | |
| CATTTCTAAGTTCCAACACT+TGG | + | chr5_2:29573837-29573856 | None:intergenic | 35.0% | |
| !! | CAAGTGTTGGAACTTAGAAA+TGG | - | chr5_2:29573835-29573854 | Msa0767050:CDS | 35.0% |
| GCATAAATAAACTGCTTAGC+AGG | - | chr5_2:29573961-29573980 | Msa0767050:five_prime_UTR | 35.0% | |
| ACAGGATAAAACTGGATTGC+GGG | + | chr5_2:29570784-29570803 | None:intergenic | 40.0% | |
| GACAGGATAAAACTGGATTG+CGG | + | chr5_2:29570785-29570804 | None:intergenic | 40.0% | |
| CAACGATTCCATAGAAGAAG+AGG | - | chr5_2:29570827-29570846 | Msa0767050:three_prime_UTR | 40.0% | |
| AAACGGGAAAGAAGGTTAGT+TGG | + | chr5_2:29570879-29570898 | None:intergenic | 40.0% | |
| !! | TAGAGACAACGATGATGGAT+TGG | + | chr5_2:29570947-29570966 | None:intergenic | 40.0% |
| AGAGATAGAGACAACGATGA+TGG | + | chr5_2:29570952-29570971 | None:intergenic | 40.0% | |
| GTAATCCAATTCTGGGTTGT+TGG | + | chr5_2:29570985-29571004 | None:intergenic | 40.0% | |
| AGATTTCACATAAGCACGCA+CGG | + | chr5_2:29571185-29571204 | None:intergenic | 40.0% | |
| GTCGTTGAATTTGGGAGTAA+AGG | + | chr5_2:29571294-29571313 | None:intergenic | 40.0% | |
| CCACACAAGTCGTTGAATTT+GGG | + | chr5_2:29571302-29571321 | None:intergenic | 40.0% | |
| TCCACACAAGTCGTTGAATT+TGG | + | chr5_2:29571303-29571322 | None:intergenic | 40.0% | |
| TATGAGATTACTGCTGCAAC+AGG | - | chr5_2:29571401-29571420 | Msa0767050:three_prime_UTR | 40.0% | |
| ATTACTTTGTCGCGAAACTC+TGG | - | chr5_2:29571588-29571607 | Msa0767050:CDS | 40.0% | |
| TTACTTTGTCGCGAAACTCT+GGG | - | chr5_2:29571589-29571608 | Msa0767050:CDS | 40.0% | |
| ATGGTAGATTCTCCAAACCT+TGG | + | chr5_2:29571652-29571671 | None:intergenic | 40.0% | |
| ATGATTGGAAACATAGACGG+CGG | + | chr5_2:29571687-29571706 | None:intergenic | 40.0% | |
| CCCAACCAATTATCGGAAAA+AGG | + | chr5_2:29571784-29571803 | None:intergenic | 40.0% | |
| ! | TGGTTGGGCAATGTTTCTTT+TGG | - | chr5_2:29571796-29571815 | Msa0767050:intron | 40.0% |
| ! | GGTTGGGCAATGTTTCTTTT+GGG | - | chr5_2:29571797-29571816 | Msa0767050:intron | 40.0% |
| !! | TGTAATTCCTTTGAAGCGCA+TGG | - | chr5_2:29571820-29571839 | Msa0767050:intron | 40.0% |
| CTACTAGCATACTTACCATC+TGG | + | chr5_2:29571856-29571875 | None:intergenic | 40.0% | |
| CAGATGGTAAGTATGCTAGT+AGG | - | chr5_2:29571854-29571873 | Msa0767050:intron | 40.0% | |
| ACATAACCTGGAACACAAGT+GGG | - | chr5_2:29572175-29572194 | Msa0767050:intron | 40.0% | |
| GGTGTCCGTTCTTCATAAAT+AGG | + | chr5_2:29572310-29572329 | None:intergenic | 40.0% | |
| GACTGATTAGAGGAAGCAAA+GGG | + | chr5_2:29572570-29572589 | None:intergenic | 40.0% | |
| TGACTGATTAGAGGAAGCAA+AGG | + | chr5_2:29572571-29572590 | None:intergenic | 40.0% | |
| CGACTATTGTGACTGATTAG+AGG | + | chr5_2:29572580-29572599 | None:intergenic | 40.0% | |
| TTCCTCAATATTCAGCACCA+TGG | - | chr5_2:29572634-29572653 | Msa0767050:intron | 40.0% | |
| TTAGACTCCAGGAGGTTATA+AGG | + | chr5_2:29572687-29572706 | None:intergenic | 40.0% | |
| TCAGCAAATCTCTCTTTGAG+GGG | - | chr5_2:29572743-29572762 | Msa0767050:intron | 40.0% | |
| GGGCTTGACCAGATAATTAT+TGG | - | chr5_2:29572763-29572782 | Msa0767050:CDS | 40.0% | |
| ATGCATAACGCTACCTATGT+AGG | + | chr5_2:29572899-29572918 | None:intergenic | 40.0% | |
| ATAAGGGTGATTGGTACAAC+TGG | + | chr5_2:29573089-29573108 | None:intergenic | 40.0% | |
| GTTGTACCAATCACCCTTAT+TGG | - | chr5_2:29573089-29573108 | Msa0767050:CDS | 40.0% | |
| ! | AGGGAGGGTATATTGAACTT+AGG | - | chr5_2:29573137-29573156 | Msa0767050:CDS | 40.0% |
| ACATGCTATGCAAAGAAGCT+AGG | - | chr5_2:29573207-29573226 | Msa0767050:CDS | 40.0% | |
| TCTCTTGCAGTACATTTGTC+AGG | + | chr5_2:29573261-29573280 | None:intergenic | 40.0% | |
| ACAACTTATGACTGCACTAG+AGG | + | chr5_2:29573547-29573566 | None:intergenic | 40.0% | |
| AAACTCATAGCTAGTACACC+TGG | + | chr5_2:29573602-29573621 | None:intergenic | 40.0% | |
| TCTAAGTTCCAACACTTGGA+CGG | + | chr5_2:29573833-29573852 | None:intergenic | 40.0% | |
| ATCTCAGTTTCATGCCTTTG+TGG | - | chr5_2:29573869-29573888 | Msa0767050:exon | 40.0% | |
| TCTCAGTTTCATGCCTTTGT+GGG | - | chr5_2:29573870-29573889 | Msa0767050:exon | 40.0% | |
| GATTGGAGAAGCAACTTCCA+TGG | + | chr5_2:29570930-29570949 | None:intergenic | 45.0% | |
| CAACCCAGAATTGGATTACG+CGG | - | chr5_2:29570986-29571005 | Msa0767050:three_prime_UTR | 45.0% | |
| GTTCCGCGTAATCCAATTCT+GGG | + | chr5_2:29570992-29571011 | None:intergenic | 45.0% | |
| TGTTCCGCGTAATCCAATTC+TGG | + | chr5_2:29570993-29571012 | None:intergenic | 45.0% | |
| !!! | GGAACACCTCCTCCTTTTTT+CGG | - | chr5_2:29571007-29571026 | Msa0767050:three_prime_UTR | 45.0% |
| CACTTACCGAAAAAAGGAGG+AGG | + | chr5_2:29571016-29571035 | None:intergenic | 45.0% | |
| ACTCGTACACGCTTAATCTG+AGG | - | chr5_2:29571154-29571173 | Msa0767050:three_prime_UTR | 45.0% | |
| CCCAAATTCAACGACTTGTG+TGG | - | chr5_2:29571299-29571318 | Msa0767050:three_prime_UTR | 45.0% | |
| TTCAACGACTTGTGTGGAAC+TGG | - | chr5_2:29571305-29571324 | Msa0767050:three_prime_UTR | 45.0% | |
| TGTGGAACTGGAACTGGAAT+TGG | - | chr5_2:29571317-29571336 | Msa0767050:three_prime_UTR | 45.0% | |
| ATTACTGCTGCAACAGGAGA+CGG | - | chr5_2:29571407-29571426 | Msa0767050:three_prime_UTR | 45.0% | |
| TGATTGGAAACATAGACGGC+GGG | + | chr5_2:29571686-29571705 | None:intergenic | 45.0% | |
| ! | GCATACTTACCATCTGGCTT+CGG | + | chr5_2:29571850-29571869 | None:intergenic | 45.0% |
| ! | AGCCTCTGTCTTTTTCTTCC+CGG | - | chr5_2:29571989-29572008 | Msa0767050:intron | 45.0% |
| ! | TCTGTCTTTTTCTTCCCGGA+GGG | - | chr5_2:29571993-29572012 | Msa0767050:intron | 45.0% |
| CACATAACCTGGAACACAAG+TGG | - | chr5_2:29572174-29572193 | Msa0767050:intron | 45.0% | |
| CATAACCTGGAACACAAGTG+GGG | - | chr5_2:29572176-29572195 | Msa0767050:intron | 45.0% | |
| ATAACCTGGAACACAAGTGG+GGG | - | chr5_2:29572177-29572196 | Msa0767050:intron | 45.0% | |
| !! | AATCTCACAAGTGTCGGTGT+CGG | - | chr5_2:29572397-29572416 | Msa0767050:intron | 45.0% |
| !! | TTCTAATCGAAGGAGTGTCC+CGG | + | chr5_2:29572426-29572445 | None:intergenic | 45.0% |
| TCGGGATACTCCATTCAATC+TGG | - | chr5_2:29572597-29572616 | Msa0767050:intron | 45.0% | |
| ! | TGCCATGGTGCTGAATATTG+AGG | + | chr5_2:29572639-29572658 | None:intergenic | 45.0% |
| CTAATTCTTGCCCTGTGCAA+TGG | - | chr5_2:29572661-29572680 | Msa0767050:intron | 45.0% | |
| GGTTATAAGGCCATTGCACA+GGG | + | chr5_2:29572674-29572693 | None:intergenic | 45.0% | |
| AGGTTATAAGGCCATTGCAC+AGG | + | chr5_2:29572675-29572694 | None:intergenic | 45.0% | |
| GATGTGAGGAATTAGACTCC+AGG | + | chr5_2:29572698-29572717 | None:intergenic | 45.0% | |
| GTTGAAGGTCACATGATGTG+AGG | + | chr5_2:29572712-29572731 | None:intergenic | 45.0% | |
| CCAGTTCCAATAAGGGTGAT+TGG | + | chr5_2:29573098-29573117 | None:intergenic | 45.0% | |
| CCAATCACCCTTATTGGAAC+TGG | - | chr5_2:29573095-29573114 | Msa0767050:CDS | 45.0% | |
| GATTGGGCCAGTTCCAATAA+GGG | + | chr5_2:29573105-29573124 | None:intergenic | 45.0% | |
| TGATTGGGCCAGTTCCAATA+AGG | + | chr5_2:29573106-29573125 | None:intergenic | 45.0% | |
| ! | TTGCACTTCAGTCTTGTGTG+CGG | - | chr5_2:29573467-29573486 | Msa0767050:CDS | 45.0% |
| CACAGTAAATCGACGCTTTG+AGG | + | chr5_2:29573745-29573764 | None:intergenic | 45.0% | |
| TAAAATGGCCGTCCAAGTGT+TGG | - | chr5_2:29573822-29573841 | Msa0767050:CDS | 45.0% | |
| CTCAGTTTCATGCCTTTGTG+GGG | - | chr5_2:29573871-29573890 | Msa0767050:exon | 45.0% | |
| TGAGTAACGTTTCCCCACAA+AGG | + | chr5_2:29573886-29573905 | None:intergenic | 45.0% | |
| TCTCGCCAACAACCCAGAAT+TGG | - | chr5_2:29570977-29570996 | Msa0767050:three_prime_UTR | 50.0% | |
| GACTTGTGTGGAACTGGAAC+TGG | - | chr5_2:29571311-29571330 | Msa0767050:three_prime_UTR | 50.0% | |
| CTCCGGGAAGAAAAAGACAG+AGG | + | chr5_2:29571994-29572013 | None:intergenic | 50.0% | |
| ! | CTCTGTCTTTTTCTTCCCGG+AGG | - | chr5_2:29571992-29572011 | Msa0767050:intron | 50.0% |
| TCTTTAGTGCGTGTTCCCTC+CGG | + | chr5_2:29572011-29572030 | None:intergenic | 50.0% | |
| GAGGGAACACGCACTAAAGA+TGG | - | chr5_2:29572011-29572030 | Msa0767050:intron | 50.0% | |
| !! | GGGCAAGAATTAGCTTGCCA+TGG | + | chr5_2:29572654-29572673 | None:intergenic | 50.0% |
| !! | GCAATGGCCTTATAACCTCC+TGG | - | chr5_2:29572677-29572696 | Msa0767050:intron | 50.0% |
| GTGAGGAATTAGACTCCAGG+AGG | + | chr5_2:29572695-29572714 | None:intergenic | 50.0% | |
| ! | TTCCTCTGGGGATGTACAGA+AGG | - | chr5_2:29573031-29573050 | Msa0767050:CDS | 50.0% |
| ! | TCCTCTGGGGATGTACAGAA+GGG | - | chr5_2:29573032-29573051 | Msa0767050:CDS | 50.0% |
| AATATACCCTCCCTTCCAGC+TGG | + | chr5_2:29573131-29573150 | None:intergenic | 50.0% | |
| ! | CTTCAGTCTTGTGTGCGGAT+TGG | - | chr5_2:29573472-29573491 | Msa0767050:CDS | 50.0% |
| !! | ACATAGACGGCGGGAGTATC+TGG | + | chr5_2:29571677-29571696 | None:intergenic | 55.0% |
| CTTTAGTGCGTGTTCCCTCC+GGG | + | chr5_2:29572010-29572029 | None:intergenic | 55.0% | |
| GTCTGTGTCAGTGTCGTGTC+CGG | + | chr5_2:29572331-29572350 | None:intergenic | 55.0% | |
| TCCCTTCTGTACATCCCCAG+AGG | + | chr5_2:29573036-29573055 | None:intergenic | 55.0% | |
| CCCTTCCAGCTGGCATGATT+GGG | + | chr5_2:29573121-29573140 | None:intergenic | 55.0% | |
| CCCAATCATGCCAGCTGGAA+GGG | - | chr5_2:29573118-29573137 | Msa0767050:CDS | 55.0% | |
| TCCCTTCCAGCTGGCATGAT+TGG | + | chr5_2:29573122-29573141 | None:intergenic | 55.0% | |
| AATCATGCCAGCTGGAAGGG+AGG | - | chr5_2:29573121-29573140 | Msa0767050:CDS | 55.0% | |
| ATCATGCCAGCTGGAAGGGA+GGG | - | chr5_2:29573122-29573141 | Msa0767050:CDS | 55.0% | |
| ! | GGCTGGCTCTTTCCCAGTTA+AGG | - | chr5_2:29573330-29573349 | Msa0767050:CDS | 55.0% |
| !! | ACGGCGGGAGTATCTGGAGA+TGG | + | chr5_2:29571671-29571690 | None:intergenic | 60.0% |
| CGGCTGTCCATGCGCTTCAA+AGG | + | chr5_2:29571830-29571849 | None:intergenic | 60.0% | |
| CATGGACAGCCGAAGCCAGA+TGG | - | chr5_2:29571838-29571857 | Msa0767050:intron | 60.0% | |
| AGTGCCCCCACTTGTGTTCC+AGG | + | chr5_2:29572184-29572203 | None:intergenic | 60.0% | |
| !! | CAAGTGTCGGTGTCGGACAC+CGG | - | chr5_2:29572404-29572423 | Msa0767050:intron | 60.0% |
| !! | AAGTGTCGGTGTCGGACACC+GGG | - | chr5_2:29572405-29572424 | Msa0767050:intron | 60.0% |
| ACTGGCCCAATCATGCCAGC+TGG | - | chr5_2:29573113-29573132 | Msa0767050:CDS | 60.0% | |
| GCCCAATCATGCCAGCTGGA+AGG | - | chr5_2:29573117-29573136 | Msa0767050:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 29570781 | 29574021 | 29570781 | ID=Msa0767050;Name=Msa0767050 |
| chr5_2 | mRNA | 29570781 | 29574021 | 29570781 | ID=Msa0767050-mRNA-1;Parent=Msa0767050;Name=Msa0767050-mRNA-1;_AED=0.00;_eAED=0.00;_QI=148|1|1|1|1|1|4|759|341 |
| chr5_2 | exon | 29570781 | 29571752 | 29570781 | ID=Msa0767050-mRNA-1:exon:11270;Parent=Msa0767050-mRNA-1 |
| chr5_2 | exon | 29572750 | 29572851 | 29572750 | ID=Msa0767050-mRNA-1:exon:11269;Parent=Msa0767050-mRNA-1 |
| chr5_2 | exon | 29572943 | 29573553 | 29572943 | ID=Msa0767050-mRNA-1:exon:11268;Parent=Msa0767050-mRNA-1 |
| chr5_2 | exon | 29573774 | 29574021 | 29573774 | ID=Msa0767050-mRNA-1:exon:11267;Parent=Msa0767050-mRNA-1 |
| chr5_2 | five_prime_UTR | 29573874 | 29574021 | 29573874 | ID=Msa0767050-mRNA-1:five_prime_utr;Parent=Msa0767050-mRNA-1 |
| chr5_2 | CDS | 29573774 | 29573873 | 29573774 | ID=Msa0767050-mRNA-1:cds;Parent=Msa0767050-mRNA-1 |
| chr5_2 | CDS | 29572943 | 29573553 | 29572943 | ID=Msa0767050-mRNA-1:cds;Parent=Msa0767050-mRNA-1 |
| chr5_2 | CDS | 29572750 | 29572851 | 29572750 | ID=Msa0767050-mRNA-1:cds;Parent=Msa0767050-mRNA-1 |
| chr5_2 | CDS | 29571540 | 29571752 | 29571540 | ID=Msa0767050-mRNA-1:cds;Parent=Msa0767050-mRNA-1 |
| chr5_2 | three_prime_UTR | 29570781 | 29571539 | 29570781 | ID=Msa0767050-mRNA-1:three_prime_utr;Parent=Msa0767050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
