Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770530 | YP_009430394.1 | 100.000 | 122 | 0 | 0 | 1 | 122 | 1 | 122 | 1.97e-80 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770530 | sp|P08834|NU1M_CITLA | 96.386 | 83 | 3 | 0 | 33 | 115 | 135 | 217 | 9.77e-46 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770530 | A0A288W756 | 100.000 | 122 | 0 | 0 | 1 | 122 | 1 | 122 | 9.39e-81 | 252 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0770530 | Msa0983490 | 0.801958 | 7.043299e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770530 | MtrunA17_Chr5g0423371 | 90.588 | 85 | 7 | 1 | 118 | 202 | 19 | 102 | 7.18e-53 | 171 |
| Msa0770530 | MtrunA17_Chr6g0457321 | 100.000 | 77 | 0 | 0 | 46 | 122 | 1 | 77 | 3.71e-48 | 157 |
| Msa0770530 | MtrunA17_MTg0491321 | 100.000 | 77 | 0 | 0 | 46 | 122 | 1 | 77 | 3.71e-48 | 157 |
| Msa0770530 | MtrunA17_Chr5g0416871 | 98.701 | 77 | 1 | 0 | 46 | 122 | 1 | 77 | 7.27e-47 | 155 |
| Msa0770530 | MtrunA17_Chr7g0241111 | 46.067 | 89 | 37 | 2 | 116 | 201 | 15 | 95 | 4.29e-13 | 65.1 |
| Msa0770530 | MtrunA17_Chr5g0424951 | 46.939 | 49 | 26 | 0 | 116 | 164 | 16 | 64 | 6.48e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770530 | ATMG01120.1 | 98.438 | 64 | 1 | 0 | 31 | 94 | 28 | 91 | 2.85e-38 | 132 |
Find 107 sgRNAs with CRISPR-Local
Find 499 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGATTCAGCTTCCGCTTC+TGG | 0.165171 | 5_2:+41413000 | None:intergenic |
| TTGCCATGGCGGAGAGAATT+TGG | 0.223219 | 5_2:-41406636 | Msa0770530:CDS |
| TATTCTGGTTCGGCATATTC+AGG | 0.276931 | 5_2:+41408124 | None:intergenic |
| GCCATGGCGAGCTGGGGATC+AGG | 0.311701 | 5_2:-41406704 | Msa0770530:CDS |
| TATTCCCTTGTTCCCTGTAT+TGG | 0.311717 | 5_2:-41413076 | Msa0770530:CDS |
| CCGCCAACAGTGGACTATTA+AGG | 0.319233 | 5_2:+41412941 | None:intergenic |
| TTTCGCCGTGGCGAGCTAAA+TGG | 0.319530 | 5_2:+41406663 | None:intergenic |
| GCACAACATATATCTTGATT+TGG | 0.319756 | 5_2:+41407272 | None:intergenic |
| GAAACTTGCACGTGTGGTTC+TGG | 0.322912 | 5_2:-41413186 | Msa0770530:CDS |
| TGATCATCGTATTCCGGTTC+AGG | 0.327964 | 5_2:+41408094 | None:intergenic |
| TAGAAAGGATTGAGGAAGAG+AGG | 0.330733 | 5_2:+41407303 | None:intergenic |
| GGTTCAGGACCATCATATTC+TGG | 0.332731 | 5_2:+41408109 | None:intergenic |
| AAGCCAATGTCCCGGGGTCC+CGG | 0.343239 | 5_2:-41412918 | Msa0770530:CDS |
| GACAATCTCACTCGAATTAC+GGG | 0.352188 | 5_2:+41413125 | None:intergenic |
| TGGTGTTTAGAAGCTTGGTT+TGG | 0.360495 | 5_2:-41407229 | Msa0770530:CDS |
| AAATGATTTGAAGCTTGAAT+TGG | 0.363842 | 5_2:-41407075 | Msa0770530:CDS |
| TGACAATCTCACTCGAATTA+CGG | 0.377810 | 5_2:+41413124 | None:intergenic |
| CTGATTCAGCTTCCGCTTCT+GGG | 0.383301 | 5_2:+41413001 | None:intergenic |
| CCCTTGTGATCATCGTATTC+CGG | 0.386523 | 5_2:+41408088 | None:intergenic |
| AGCCAATGTCCCGGGGTCCC+GGG | 0.390660 | 5_2:-41412917 | Msa0770530:CDS |
| GAGCCTCGGATAGCCCTTGC+TGG | 0.398699 | 5_2:+41406566 | None:intergenic |
| GGAGGCGTACAGAAATCTTC+TGG | 0.399298 | 5_2:+41408190 | None:intergenic |
| GCGGAAGCTGAATCAGTTGC+AGG | 0.404641 | 5_2:-41412994 | Msa0770530:CDS |
| ATGAAGAACATAACCAATAC+AGG | 0.407242 | 5_2:+41413063 | None:intergenic |
| TTAATACACCGCGTAATCAT+TGG | 0.412974 | 5_2:+41408169 | None:intergenic |
| AGCTGGGGATCAGGGCTCTC+CGG | 0.414573 | 5_2:-41406695 | Msa0770530:CDS |
| AGCTAAATGGCGAGCTACTC+CGG | 0.417979 | 5_2:+41406676 | None:intergenic |
| TTTAGCTCGCCATGGCGAGC+TGG | 0.420138 | 5_2:-41406712 | Msa0770530:CDS |
| AGAAAGGATTGAGGAAGAGA+GGG | 0.423270 | 5_2:+41407304 | None:intergenic |
| GCTTATGGTGTTTAGAAGCT+TGG | 0.423453 | 5_2:-41407234 | Msa0770530:CDS |
| TGCACGTGTGGTTCTGGCCG+GGG | 0.427739 | 5_2:-41413180 | Msa0770530:CDS |
| TTGCACGTGTGGTTCTGGCC+GGG | 0.429456 | 5_2:-41413181 | Msa0770530:CDS |
| TTAGCTCGCCATGGCGAGCT+GGG | 0.433847 | 5_2:-41406711 | Msa0770530:CDS |
| CATGGATCATAGAAGCTACT+TGG | 0.439845 | 5_2:-41407115 | Msa0770530:CDS |
| TTGGCGGAAGCCAATGTCCC+GGG | 0.440727 | 5_2:-41412925 | Msa0770530:CDS |
| GTGGTTCTGGCCGGGGACCC+CGG | 0.452305 | 5_2:-41413173 | Msa0770530:CDS |
| CTTGCACGTGTGGTTCTGGC+CGG | 0.455249 | 5_2:-41413182 | Msa0770530:CDS |
| GCAAATGATGAAAGAAATAG+AGG | 0.458970 | 5_2:-41408008 | Msa0770530:intron |
| AGCGCGGACGAGCCACATGC+AGG | 0.464313 | 5_2:-41413209 | Msa0770530:CDS |
| TCCGCTTCTGGGAGATCAAA+CGG | 0.464825 | 5_2:+41413012 | None:intergenic |
| CCATGGCGAGCTGGGGATCA+GGG | 0.469837 | 5_2:-41406703 | Msa0770530:CDS |
| CACATATTAGTACAGTATAC+CGG | 0.472296 | 5_2:+41413154 | None:intergenic |
| GGTGTTTAGAAGCTTGGTTT+GGG | 0.474280 | 5_2:-41407228 | Msa0770530:CDS |
| AGAATATGATGGTCCTGAAC+CGG | 0.477202 | 5_2:-41408107 | Msa0770530:CDS |
| GCGCTGCCTGTGACTCAGCA+TGG | 0.477783 | 5_2:+41413239 | None:intergenic |
| TGGTGAAGGAAGTGTTGAGT+TGG | 0.483897 | 5_2:-41407154 | Msa0770530:CDS |
| AGGACCATCATATTCTGGTT+CGG | 0.485062 | 5_2:+41408114 | None:intergenic |
| CTTATCCCATGCTGAGTCAC+AGG | 0.487969 | 5_2:-41413245 | None:intergenic |
| TCATGGCGCAAAAGCAGATA+TGG | 0.489794 | 5_2:-41413104 | Msa0770530:CDS |
| TACAGGGAACAAGGGAATAC+CGG | 0.493213 | 5_2:+41413080 | None:intergenic |
| CATAACCAATACAGGGAACA+AGG | 0.494522 | 5_2:+41413071 | None:intergenic |
| TTTCAGTCAGAATGAGTCCC+CGG | 0.499152 | 5_2:+41412899 | None:intergenic |
| CCTTAATAGTCCACTGTTGG+CGG | 0.501103 | 5_2:-41412941 | Msa0770530:CDS |
| CTGGACTGCTACAGTTCGCC+AGG | 0.503389 | 5_2:-41406740 | Msa0770530:CDS |
| CGCTGCCTGTGACTCAGCAT+GGG | 0.504584 | 5_2:+41413240 | None:intergenic |
| GTTGGCGGAAGCCAATGTCC+CGG | 0.523025 | 5_2:-41412926 | Msa0770530:CDS |
| ATGGCGAGCTAAATTCCGCC+TGG | 0.523188 | 5_2:+41406722 | None:intergenic |
| CTAAACACCATAAGCTCTTG+AGG | 0.525407 | 5_2:+41407242 | None:intergenic |
| CTCCCTTCTCTCTTCTCCAT+CGG | 0.526998 | 5_2:-41407330 | Msa0770530:CDS |
| GGAATAGAGATGAGCAAGCA+TGG | 0.531548 | 5_2:-41407133 | Msa0770530:CDS |
| GAAATCTTCTGGACAAGTAG+TGG | 0.534532 | 5_2:+41408201 | None:intergenic |
| AAAATATGATGATGAGAGAG+AGG | 0.537248 | 5_2:-41408030 | Msa0770530:CDS |
| TGGCTCGTCCGCGCTTTCCG+AGG | 0.545535 | 5_2:+41413217 | None:intergenic |
| AGGCCGATGGAGAAGAGAGA+AGG | 0.545764 | 5_2:+41407327 | None:intergenic |
| ATGGCGGAGAGAATTTGGCC+AGG | 0.547319 | 5_2:-41406631 | Msa0770530:CDS |
| GGCCGATGGAGAAGAGAGAA+GGG | 0.547914 | 5_2:+41407328 | None:intergenic |
| GTTGTGCAGTCAATTTCGCC+TGG | 0.552598 | 5_2:+41406613 | None:intergenic |
| GACTCATTCTGACTGAAACA+AGG | 0.558903 | 5_2:-41412894 | Msa0770530:CDS |
| CCCTGATCCCCAGCTCGCCA+TGG | 0.559513 | 5_2:+41406703 | None:intergenic |
| GCGCAAAAGCAGATATGGTC+CGG | 0.560142 | 5_2:-41413099 | Msa0770530:CDS |
| GTACAGTATACCGGGGTCCC+CGG | 0.560314 | 5_2:+41413163 | None:intergenic |
| CTGAGTCACAGGCAGCGCCT+CGG | 0.560930 | 5_2:-41413234 | Msa0770530:CDS |
| AGGCAGCGCCTCGGAAAGCG+CGG | 0.564526 | 5_2:-41413225 | Msa0770530:CDS |
| TGCAGGGAAACTTGCACGTG+TGG | 0.569800 | 5_2:-41413192 | Msa0770530:CDS |
| AATTTCATATGTCTATGTGA+TGG | 0.571187 | 5_2:-41408148 | Msa0770530:CDS |
| ACTCATTCTGACTGAAACAA+GGG | 0.572352 | 5_2:-41412893 | Msa0770530:CDS |
| ACATATTAGTACAGTATACC+GGG | 0.573546 | 5_2:+41413155 | None:intergenic |
| TCCGTTTGATCTCCCAGAAG+CGG | 0.575243 | 5_2:-41413013 | Msa0770530:CDS |
| TGGCCAAATTCTCTCCGCCA+TGG | 0.578236 | 5_2:+41406633 | None:intergenic |
| AAATCTTCTGGACAAGTAGT+GGG | 0.588072 | 5_2:+41408202 | None:intergenic |
| TTCAGTCAGAATGAGTCCCC+GGG | 0.592807 | 5_2:+41412900 | None:intergenic |
| GAGGAAGAGAGGGAGGCCGA+TGG | 0.595383 | 5_2:+41407314 | None:intergenic |
| ATACACCGCGTAATCATTGG+AGG | 0.604924 | 5_2:+41408172 | None:intergenic |
| CTATAATGTAGAATATGCGC+GGG | 0.605100 | 5_2:-41412971 | Msa0770530:CDS |
| ACATTGGCTTCCGCCAACAG+TGG | 0.609432 | 5_2:+41412931 | None:intergenic |
| ACCGGAATACGATGATCACA+AGG | 0.613788 | 5_2:-41408089 | Msa0770530:CDS |
| TATGCCGAACCAGAATATGA+TGG | 0.614222 | 5_2:-41408118 | Msa0770530:CDS |
| AGGCGGAATTTAGCTCGCCA+TGG | 0.617378 | 5_2:-41406720 | Msa0770530:CDS |
| GATCCTTAATAGTCCACTGT+TGG | 0.622583 | 5_2:-41412944 | Msa0770530:CDS |
| TAGCTCGCCATGGCGAGCTG+GGG | 0.624481 | 5_2:-41406710 | Msa0770530:CDS |
| CGTGCAAGTTTCCCTGCATG+TGG | 0.625896 | 5_2:+41413197 | None:intergenic |
| GCTATAATGTAGAATATGCG+CGG | 0.641591 | 5_2:-41412972 | Msa0770530:CDS |
| GATACTGCAAGATCGAGCCT+CGG | 0.642335 | 5_2:+41406552 | None:intergenic |
| AAGGATTGAGGAAGAGAGGG+AGG | 0.645003 | 5_2:+41407307 | None:intergenic |
| TATACTGTACTAATATGTGT+AGG | 0.645057 | 5_2:-41413150 | Msa0770530:CDS |
| TGGCCAGCAAGGGCTATCCG+AGG | 0.647185 | 5_2:-41406569 | Msa0770530:CDS |
| TGGCGGAAGCCAATGTCCCG+GGG | 0.650773 | 5_2:-41412924 | Msa0770530:CDS |
| CTCATTCTGACTGAAACAAG+GGG | 0.653551 | 5_2:-41412892 | Msa0770530:intron |
| GACTGCTACAGTTCGCCAGG+CGG | 0.663091 | 5_2:-41406737 | Msa0770530:CDS |
| ATAACCAATACAGGGAACAA+GGG | 0.666353 | 5_2:+41413072 | None:intergenic |
| TAATTCGAGTGAGATTGTCA+TGG | 0.670063 | 5_2:-41413121 | Msa0770530:CDS |
| TGAAGAACATAACCAATACA+GGG | 0.679081 | 5_2:+41413064 | None:intergenic |
| GCTCGCCATTTAGCTCGCCA+CGG | 0.680280 | 5_2:-41406668 | Msa0770530:CDS |
| ACAATCTCACTCGAATTACG+GGG | 0.706351 | 5_2:+41413126 | None:intergenic |
| GTACGCCTCCAATGATTACG+CGG | 0.714295 | 5_2:-41408177 | Msa0770530:CDS |
| CATATTAGTACAGTATACCG+GGG | 0.740685 | 5_2:+41413156 | None:intergenic |
| CCGGAATACGATGATCACAA+GGG | 0.751272 | 5_2:-41408088 | Msa0770530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATAAAAATTGTTGATT+TGG | + | chr5_2:41410998-41411017 | None:intergenic | 10.0% |
| !!! | ATTTTTCAAAATTCTATAAA+TGG | - | chr5_2:41411251-41411270 | Msa0770530:intron | 10.0% |
| !!! | ATATTTTCATTTATAACTTT+AGG | + | chr5_2:41411739-41411758 | None:intergenic | 10.0% |
| !!! | AAAATCTTAGATTTTTAAGT+TGG | + | chr5_2:41406926-41406945 | None:intergenic | 15.0% |
| !!! | ACTTAAAAATCTAAGATTTT+AGG | - | chr5_2:41406926-41406945 | Msa0770530:intron | 15.0% |
| !! | CTTTACTAATAAAATAGAAA+GGG | + | chr5_2:41407072-41407091 | None:intergenic | 15.0% |
| !! | TCTTTACTAATAAAATAGAA+AGG | + | chr5_2:41407073-41407092 | None:intergenic | 15.0% |
| !! | ATGTATATATACTAATTGAA+TGG | + | chr5_2:41407682-41407701 | None:intergenic | 15.0% |
| !! | TCATATTAATCTATTCATAA+AGG | - | chr5_2:41407932-41407951 | Msa0770530:intron | 15.0% |
| !! | CATATTAATCTATTCATAAA+GGG | - | chr5_2:41407933-41407952 | Msa0770530:intron | 15.0% |
| !!! | TGAAGAAAAATGAATTTTTA+AGG | - | chr5_2:41408311-41408330 | Msa0770530:intron | 15.0% |
| !!! | CATATATCAAAATTTCATTT+TGG | - | chr5_2:41408785-41408804 | Msa0770530:intron | 15.0% |
| !!! | TTACTAACATTAGTTTATAT+AGG | - | chr5_2:41409350-41409369 | Msa0770530:intron | 15.0% |
| !!! | GTAGTAATTATTTTATTTAC+CGG | + | chr5_2:41409489-41409508 | None:intergenic | 15.0% |
| !! | AAAATAAATCTAACGAAAAT+CGG | - | chr5_2:41409728-41409747 | Msa0770530:intron | 15.0% |
| !! | ATTAATCTCTATTTATTTGT+TGG | - | chr5_2:41410133-41410152 | Msa0770530:intron | 15.0% |
| !!! | TTTTGTAATGATTCTAATTT+AGG | - | chr5_2:41411221-41411240 | Msa0770530:intron | 15.0% |
| !! | AAATTTAAAAGAATGAAAAG+TGG | + | chr5_2:41411459-41411478 | None:intergenic | 15.0% |
| !! | GTAAATAAAAAATAGAACAT+AGG | + | chr5_2:41411538-41411557 | None:intergenic | 15.0% |
| !! | AAAAAATAATTCCAACAATT+GGG | + | chr5_2:41411944-41411963 | None:intergenic | 15.0% |
| !! | AAAAAAATAATTCCAACAAT+TGG | + | chr5_2:41411945-41411964 | None:intergenic | 15.0% |
| !!! | TTTTGAGATATAAACATATA+AGG | + | chr5_2:41412103-41412122 | None:intergenic | 15.0% |
| !!! | AAAGGATATTTATATGATTT+TGG | - | chr5_2:41412369-41412388 | Msa0770530:intron | 15.0% |
| !!! | AAGGATATTTATATGATTTT+GGG | - | chr5_2:41412370-41412389 | Msa0770530:intron | 15.0% |
| !! | TAACAATATTTGATCATAAA+TGG | + | chr5_2:41412911-41412930 | None:intergenic | 15.0% |
| !!! | ATTTTGATATATGAAGTTGT+TGG | + | chr5_2:41408778-41408797 | None:intergenic | 20.0% |
| !! | TTGAATTTGTATGTCTAAAT+GGG | + | chr5_2:41409030-41409049 | None:intergenic | 20.0% |
| !!! | ATTGATGGATTGATTTTAAT+TGG | + | chr5_2:41409120-41409139 | None:intergenic | 20.0% |
| !! | ATCCATCAATTTCATAAAAA+TGG | - | chr5_2:41409130-41409149 | Msa0770530:intron | 20.0% |
| !! | TCCATCAATTTCATAAAAAT+GGG | - | chr5_2:41409131-41409150 | Msa0770530:intron | 20.0% |
| !! | ATTTCATAAAAATGGGTAAA+AGG | - | chr5_2:41409138-41409157 | Msa0770530:intron | 20.0% |
| !! | TTTCATAAAAATGGGTAAAA+GGG | - | chr5_2:41409139-41409158 | Msa0770530:intron | 20.0% |
| !!! | TATTTTACCAAGTTACTATA+GGG | + | chr5_2:41409513-41409532 | None:intergenic | 20.0% |
| !!! | TTATTTTACCAAGTTACTAT+AGG | + | chr5_2:41409514-41409533 | None:intergenic | 20.0% |
| !! | AAATAAATCTAACGAAAATC+GGG | - | chr5_2:41409729-41409748 | Msa0770530:intron | 20.0% |
| !! | TTATAATGCATGATTACTTA+GGG | + | chr5_2:41409934-41409953 | None:intergenic | 20.0% |
| !! | TTTATAATGCATGATTACTT+AGG | + | chr5_2:41409935-41409954 | None:intergenic | 20.0% |
| !!! | TTTAGTTTCTTTTGTTATGT+TGG | - | chr5_2:41410070-41410089 | Msa0770530:intron | 20.0% |
| !!! | AATCTTTTTCAAACTAAGTT+AGG | - | chr5_2:41410221-41410240 | Msa0770530:intron | 20.0% |
| !! | TTTATTTACTTAGTTATCCT+TGG | + | chr5_2:41410649-41410668 | None:intergenic | 20.0% |
| !!! | ACTTGCTATTAAAAACATTT+GGG | - | chr5_2:41411076-41411095 | Msa0770530:intron | 20.0% |
| !! | AATGGTAGAAAATATTTACT+TGG | - | chr5_2:41411269-41411288 | Msa0770530:intron | 20.0% |
| !! | TACAATATTCAAGTGAAATT+TGG | + | chr5_2:41412177-41412196 | None:intergenic | 20.0% |
| !! | TAATTGTAATTGCATGAAAA+AGG | - | chr5_2:41412351-41412370 | Msa0770530:intron | 20.0% |
| !!! | AAGATGTTTTTATGATGTTT+TGG | - | chr5_2:41412953-41412972 | Msa0770530:CDS | 20.0% |
| ! | TATACTGTACTAATATGTGT+AGG | - | chr5_2:41406632-41406651 | Msa0770530:CDS | 25.0% |
| !! | ATGAACTTGAGTTTTCAATA+AGG | + | chr5_2:41406984-41407003 | None:intergenic | 25.0% |
| !!! | CTTTTAATTTTGATAGGAGT+AGG | - | chr5_2:41407122-41407141 | Msa0770530:CDS | 25.0% |
| ! | TTCATACATGCTAATATTGA+TGG | + | chr5_2:41407596-41407615 | None:intergenic | 25.0% |
| !! | ACATGTTAAATGTTGATTGT+TGG | + | chr5_2:41407626-41407645 | None:intergenic | 25.0% |
| ! | AATTGAATTGTAGATGTTGT+TGG | + | chr5_2:41407743-41407762 | None:intergenic | 25.0% |
| !! | AACTATAAGGTTGATTTATG+TGG | + | chr5_2:41407804-41407823 | None:intergenic | 25.0% |
| ! | ATTCCTTACAATCCAAATAA+AGG | - | chr5_2:41407840-41407859 | Msa0770530:intron | 25.0% |
| ! | GTTGTATTTGTTCCTTTATT+TGG | + | chr5_2:41407855-41407874 | None:intergenic | 25.0% |
| ! | ATTATGAGATGATGTATGAA+TGG | + | chr5_2:41407913-41407932 | None:intergenic | 25.0% |
| !! | ATTTTCAATGTTGTGAGTTT+TGG | + | chr5_2:41408006-41408025 | None:intergenic | 25.0% |
| ! | TCCTATAATTTCGTTGTATT+TGG | + | chr5_2:41408136-41408155 | None:intergenic | 25.0% |
| ! | TATTGAGTTCTTATGTTGTT+TGG | + | chr5_2:41408196-41408215 | None:intergenic | 25.0% |
| !! | GGAAATAACTTTGTTTAAAG+GGG | + | chr5_2:41408221-41408240 | None:intergenic | 25.0% |
| !! | CGGAAATAACTTTGTTTAAA+GGG | + | chr5_2:41408222-41408241 | None:intergenic | 25.0% |
| !! | ACGGAAATAACTTTGTTTAA+AGG | + | chr5_2:41408223-41408242 | None:intergenic | 25.0% |
| !!! | AGGTTTTGGAAAATGATTTT+GGG | + | chr5_2:41408608-41408627 | None:intergenic | 25.0% |
| !!! | ATCACACTCATTTTTCAAAA+CGG | - | chr5_2:41408631-41408650 | Msa0770530:intron | 25.0% |
| ! | ATGATTTCATGATTAGATGT+TGG | + | chr5_2:41408939-41408958 | None:intergenic | 25.0% |
| ! | GTTGAATTTGTATGTCTAAA+TGG | + | chr5_2:41409031-41409050 | None:intergenic | 25.0% |
| !!! | ACCCATTTTTATGAAATTGA+TGG | + | chr5_2:41409135-41409154 | None:intergenic | 25.0% |
| ! | TCTTCTCAAATGAAAAATGT+TGG | - | chr5_2:41409310-41409329 | Msa0770530:intron | 25.0% |
| ! | TTATATAGGCTCACTTAATT+AGG | - | chr5_2:41409364-41409383 | Msa0770530:intron | 25.0% |
| !! | AAGTGAGTAGTAACATTTTT+GGG | + | chr5_2:41409435-41409454 | None:intergenic | 25.0% |
| !! | TAAGTGAGTAGTAACATTTT+TGG | + | chr5_2:41409436-41409455 | None:intergenic | 25.0% |
| ! | AAATGTTACTACTCACTTAA+CGG | - | chr5_2:41409437-41409456 | Msa0770530:intron | 25.0% |
| ! | ACGGTAAAATATAACACTAA+CGG | - | chr5_2:41409456-41409475 | Msa0770530:intron | 25.0% |
| !! | GGTAATTTTGTAATTTTTGC+TGG | + | chr5_2:41409565-41409584 | None:intergenic | 25.0% |
| !!! | TTTTAGTCATTTTGGACTTA+GGG | + | chr5_2:41409613-41409632 | None:intergenic | 25.0% |
| !!! | ATTTTAGTCATTTTGGACTT+AGG | + | chr5_2:41409614-41409633 | None:intergenic | 25.0% |
| ! | TATAATGCATGATTACTTAG+GGG | + | chr5_2:41409933-41409952 | None:intergenic | 25.0% |
| !! | CTTTTCATATGAATCTCTAA+GGG | + | chr5_2:41410249-41410268 | None:intergenic | 25.0% |
| !!! | TTCTAGTTCATCAATATCTA+GGG | + | chr5_2:41410399-41410418 | None:intergenic | 25.0% |
| !!! | TTTCTAGTTCATCAATATCT+AGG | + | chr5_2:41410400-41410419 | None:intergenic | 25.0% |
| !! | TTTCCAGATAATTTGTAAGA+GGG | + | chr5_2:41410571-41410590 | None:intergenic | 25.0% |
| ! | TATTTCCATAAGCTTATGTT+TGG | + | chr5_2:41410780-41410799 | None:intergenic | 25.0% |
| !!! | CACTTGCTATTAAAAACATT+TGG | - | chr5_2:41411075-41411094 | Msa0770530:intron | 25.0% |
| !! | TTACCTTTTTCTATCATGAA+AGG | - | chr5_2:41411101-41411120 | Msa0770530:intron | 25.0% |
| ! | TAACCTTTCATGATAGAAAA+AGG | + | chr5_2:41411107-41411126 | None:intergenic | 25.0% |
| ! | TAATTTCTTACGTTGAAAGA+AGG | - | chr5_2:41411340-41411359 | Msa0770530:intron | 25.0% |
| ! | AATTTCATATGTCTATGTGA+TGG | - | chr5_2:41411634-41411653 | Msa0770530:intron | 25.0% |
| ! | TAATCATACGATATAAGGAT+GGG | + | chr5_2:41411855-41411874 | None:intergenic | 25.0% |
| ! | TCTAGTAATCATACGATATA+AGG | + | chr5_2:41411860-41411879 | None:intergenic | 25.0% |
| ! | ATGGTATGTGATATTTGAAA+AGG | + | chr5_2:41411980-41411999 | None:intergenic | 25.0% |
| ! | AGCAATAAACAATATCATTC+AGG | - | chr5_2:41412047-41412066 | Msa0770530:intron | 25.0% |
| !! | ATAAGGTGTTACATGAAATT+AGG | + | chr5_2:41412086-41412105 | None:intergenic | 25.0% |
| ! | TAGATGATTGTAAGATACAA+TGG | - | chr5_2:41412143-41412162 | Msa0770530:intron | 25.0% |
| ! | TATGTGATATCAGCTAAATA+CGG | - | chr5_2:41412285-41412304 | Msa0770530:intron | 25.0% |
| !!! | AATAGTTTTAGAAAGGATTG+AGG | + | chr5_2:41412490-41412509 | None:intergenic | 25.0% |
| !!! | GATTTGGAATAGTTTTAGAA+AGG | + | chr5_2:41412497-41412516 | None:intergenic | 25.0% |
| !!! | AAGAGATTTTTCTAGAGATT+AGG | - | chr5_2:41412601-41412620 | Msa0770530:intron | 25.0% |
| !!! | AGAGATTTTTCTAGAGATTA+GGG | - | chr5_2:41412602-41412621 | Msa0770530:intron | 25.0% |
| !! | AAATGATTTGAAGCTTGAAT+TGG | - | chr5_2:41412707-41412726 | Msa0770530:intron | 25.0% |
| ! | TATGTCATGAAAGATTAACA+TGG | - | chr5_2:41412843-41412862 | Msa0770530:intron | 25.0% |
| ! | AAGATTAACATGGAAATTCT+AGG | - | chr5_2:41412853-41412872 | Msa0770530:intron | 25.0% |
| ! | TGATCATAAATGGTACAAAA+GGG | + | chr5_2:41412901-41412920 | None:intergenic | 25.0% |
| ! | TTGATCATAAATGGTACAAA+AGG | + | chr5_2:41412902-41412921 | None:intergenic | 25.0% |
| ACATATTAGTACAGTATACC+GGG | + | chr5_2:41406630-41406649 | None:intergenic | 30.0% | |
| CACATATTAGTACAGTATAC+CGG | + | chr5_2:41406631-41406650 | None:intergenic | 30.0% | |
| TGAAGAACATAACCAATACA+GGG | + | chr5_2:41406721-41406740 | None:intergenic | 30.0% | |
| ATGAAGAACATAACCAATAC+AGG | + | chr5_2:41406722-41406741 | None:intergenic | 30.0% | |
| !!! | GTCACGCTTTTAATTTTGAT+AGG | - | chr5_2:41407116-41407135 | Msa0770530:CDS | 30.0% |
| CATTCGAAACTAATGAATGT+CGG | - | chr5_2:41407171-41407190 | Msa0770530:CDS | 30.0% | |
| ATTCGAAACTAATGAATGTC+GGG | - | chr5_2:41407172-41407191 | Msa0770530:CDS | 30.0% | |
| ! | TTTCTGCCTTGTTATCAAAA+AGG | - | chr5_2:41407202-41407221 | Msa0770530:CDS | 30.0% |
| ! | TTCTGCCTTGTTATCAAAAA+GGG | - | chr5_2:41407203-41407222 | Msa0770530:CDS | 30.0% |
| TTGTTATCAAAAAGGGAGTT+GGG | - | chr5_2:41407210-41407229 | Msa0770530:CDS | 30.0% | |
| AATGCATGTATGCAAAATGA+TGG | + | chr5_2:41407559-41407578 | None:intergenic | 30.0% | |
| !! | AATATTGATGGTGATCTTGT+TGG | + | chr5_2:41407584-41407603 | None:intergenic | 30.0% |
| ! | TGTTAAATGTTGATTGTTGG+TGG | + | chr5_2:41407623-41407642 | None:intergenic | 30.0% |
| ATTGTATATATGTCAAGTGG+TGG | + | chr5_2:41407718-41407737 | None:intergenic | 30.0% | |
| GTGATTGTATATATGTCAAG+TGG | + | chr5_2:41407721-41407740 | None:intergenic | 30.0% | |
| TAAGGAATTATGTGGAAATG+TGG | + | chr5_2:41407828-41407847 | None:intergenic | 30.0% | |
| TTGGATTGTAAGGAATTATG+TGG | + | chr5_2:41407836-41407855 | None:intergenic | 30.0% | |
| ! | GTTCCTTTATTTGGATTGTA+AGG | + | chr5_2:41407846-41407865 | None:intergenic | 30.0% |
| ATGTGACTTATGAGAATACA+TGG | + | chr5_2:41408077-41408096 | None:intergenic | 30.0% | |
| AGGTTACATAAGCATTTCAT+AGG | - | chr5_2:41408110-41408129 | Msa0770530:CDS | 30.0% | |
| GCCAAATACAACGAAATTAT+AGG | - | chr5_2:41408132-41408151 | Msa0770530:CDS | 30.0% | |
| ! | AAACTTGTTCCAAAGTGTAA+GGG | + | chr5_2:41408277-41408296 | None:intergenic | 30.0% |
| !! | AATTTCAGTGTTTTTGACTC+TGG | + | chr5_2:41408391-41408410 | None:intergenic | 30.0% |
| GTCAAAAACACTGAAATTTC+TGG | - | chr5_2:41408393-41408412 | Msa0770530:intron | 30.0% | |
| AAACGTGAAGGTTAAAAATC+TGG | + | chr5_2:41408477-41408496 | None:intergenic | 30.0% | |
| TTATGATAGAGCTAAGTGTT+AGG | + | chr5_2:41408557-41408576 | None:intergenic | 30.0% | |
| !! | TTTGGAAAATGATTTTGGGA+TGG | + | chr5_2:41408604-41408623 | None:intergenic | 30.0% |
| !!! | GAGGTTTTGGAAAATGATTT+TGG | + | chr5_2:41408609-41408628 | None:intergenic | 30.0% |
| ! | TGTTGATGAATTGATGCATT+GGG | + | chr5_2:41408895-41408914 | None:intergenic | 30.0% |
| ! | TTGTTGATGAATTGATGCAT+TGG | + | chr5_2:41408896-41408915 | None:intergenic | 30.0% |
| ! | AAGTTGTGCTTGTTAAATTG+TGG | + | chr5_2:41408962-41408981 | None:intergenic | 30.0% |
| ! | TTTGGGGTTAGAATAGAAAT+GGG | + | chr5_2:41409418-41409437 | None:intergenic | 30.0% |
| !!! | TTTTGGGGTTAGAATAGAAA+TGG | + | chr5_2:41409419-41409438 | None:intergenic | 30.0% |
| ! | AGTGAGTAGTAACATTTTTG+GGG | + | chr5_2:41409434-41409453 | None:intergenic | 30.0% |
| !! | TTTAGTCATTTTGGACTTAG+GGG | + | chr5_2:41409612-41409631 | None:intergenic | 30.0% |
| GGTTAAGAGAGTGAAAAATA+GGG | + | chr5_2:41409912-41409931 | None:intergenic | 30.0% | |
| TTCATAAAGTTTGCAGTACA+TGG | - | chr5_2:41409983-41410002 | Msa0770530:intron | 30.0% | |
| ACTATCTAGAGAACAAAAGA+AGG | + | chr5_2:41410047-41410066 | None:intergenic | 30.0% | |
| !! | AGTAACTAAACCTCTAAGAT+TGG | - | chr5_2:41410101-41410120 | Msa0770530:intron | 30.0% |
| !! | GTAACTAAACCTCTAAGATT+GGG | - | chr5_2:41410102-41410121 | Msa0770530:intron | 30.0% |
| TCTTATATACCCAATCTTAG+AGG | + | chr5_2:41410114-41410133 | None:intergenic | 30.0% | |
| ! | GCTTTTCATATGAATCTCTA+AGG | + | chr5_2:41410250-41410269 | None:intergenic | 30.0% |
| ! | GTGTTCACTTTATGGATTTT+GGG | + | chr5_2:41410300-41410319 | None:intergenic | 30.0% |
| ATCTTGACGAAGATTATAGA+AGG | + | chr5_2:41410347-41410366 | None:intergenic | 30.0% | |
| ! | TGAGGTTTTCAAAGTTACAA+AGG | + | chr5_2:41410466-41410485 | None:intergenic | 30.0% |
| TTTCCCTCTTACAAATTATC+TGG | - | chr5_2:41410565-41410584 | Msa0770530:intron | 30.0% | |
| ! | GTTTCCAGATAATTTGTAAG+AGG | + | chr5_2:41410572-41410591 | None:intergenic | 30.0% |
| TTACAAATTATCTGGAAACG+TGG | - | chr5_2:41410573-41410592 | Msa0770530:intron | 30.0% | |
| !! | TGTTTGGTTTGAGATTGATT+TGG | + | chr5_2:41410764-41410783 | None:intergenic | 30.0% |
| TCAAACCAAACATAAGCTTA+TGG | - | chr5_2:41410772-41410791 | Msa0770530:intron | 30.0% | |
| AAGCGATTGAATTGACAAAT+AGG | - | chr5_2:41410905-41410924 | Msa0770530:intron | 30.0% | |
| ATCTATACAAGTGTGCAAAA+GGG | - | chr5_2:41411165-41411184 | Msa0770530:intron | 30.0% | |
| CAAGAAATAGAGAAAGAAAG+AGG | + | chr5_2:41411407-41411426 | None:intergenic | 30.0% | |
| !!! | GTTCAATTTTTTACGTGCAA+AGG | - | chr5_2:41411426-41411445 | Msa0770530:intron | 30.0% |
| ! | AAAATATGATGATGAGAGAG+AGG | - | chr5_2:41411752-41411771 | Msa0770530:intron | 30.0% |
| GCAAATGATGAAAGAAATAG+AGG | - | chr5_2:41411774-41411793 | Msa0770530:intron | 30.0% | |
| GTAATCATACGATATAAGGA+TGG | + | chr5_2:41411856-41411875 | None:intergenic | 30.0% | |
| ATTATGTTGAACCCAATTGT+TGG | - | chr5_2:41411930-41411949 | Msa0770530:intron | 30.0% | |
| ATTAATATTCCGATACTGAC+AGG | + | chr5_2:41412208-41412227 | None:intergenic | 30.0% | |
| ATTACGGGAAGAAAGTTTAA+TGG | - | chr5_2:41412252-41412271 | Msa0770530:intron | 30.0% | |
| GCACAACATATATCTTGATT+TGG | + | chr5_2:41412513-41412532 | None:intergenic | 30.0% | |
| CTAGAAAAATCTCTTTGTGA+GGG | + | chr5_2:41412596-41412615 | None:intergenic | 30.0% | |
| TCTAGAAAAATCTCTTTGTG+AGG | + | chr5_2:41412597-41412616 | None:intergenic | 30.0% | |
| !! | TTTTCTAGAGATTAGGGTTT+TGG | - | chr5_2:41412608-41412627 | Msa0770530:intron | 30.0% |
| CTTGAATTGGTTAAAGTTCA+TGG | - | chr5_2:41412720-41412739 | Msa0770530:intron | 30.0% | |
| ACCTAAACATGTTCTTGTTA+CGG | + | chr5_2:41412784-41412803 | None:intergenic | 30.0% | |
| TGACATAAACATAATCCCAA+GGG | + | chr5_2:41412830-41412849 | None:intergenic | 30.0% | |
| ATGACATAAACATAATCCCA+AGG | + | chr5_2:41412831-41412850 | None:intergenic | 30.0% | |
| GATCATAAATGGTACAAAAG+GGG | + | chr5_2:41412900-41412919 | None:intergenic | 30.0% | |
| GAATTAGAACACTTGAATTG+AGG | - | chr5_2:41412987-41413006 | Msa0770530:CDS | 30.0% | |
| !!! | TGTGTTGTTATTTCGTTTTG+TGG | - | chr5_2:41413193-41413212 | Msa0770530:CDS | 30.0% |
| CATATTAGTACAGTATACCG+GGG | + | chr5_2:41406629-41406648 | None:intergenic | 35.0% | |
| TGACAATCTCACTCGAATTA+CGG | + | chr5_2:41406661-41406680 | None:intergenic | 35.0% | |
| TAATTCGAGTGAGATTGTCA+TGG | - | chr5_2:41406661-41406680 | Msa0770530:CDS | 35.0% | |
| ATAACCAATACAGGGAACAA+GGG | + | chr5_2:41406713-41406732 | None:intergenic | 35.0% | |
| GCTATAATGTAGAATATGCG+CGG | - | chr5_2:41406810-41406829 | Msa0770530:intron | 35.0% | |
| CTATAATGTAGAATATGCGC+GGG | - | chr5_2:41406811-41406830 | Msa0770530:intron | 35.0% | |
| ACTCATTCTGACTGAAACAA+GGG | - | chr5_2:41406889-41406908 | Msa0770530:intron | 35.0% | |
| !! | CAACTCCCTTTTTGATAACA+AGG | + | chr5_2:41407211-41407230 | None:intergenic | 35.0% |
| ! | CTTGTTATCAAAAAGGGAGT+TGG | - | chr5_2:41407209-41407228 | Msa0770530:CDS | 35.0% |
| CGAGTGAATATGCGTTAAAA+AGG | - | chr5_2:41407338-41407357 | Msa0770530:CDS | 35.0% | |
| AACATCGTAATCACCTCAAT+TGG | - | chr5_2:41407441-41407460 | Msa0770530:intron | 35.0% | |
| ! | GCGGATTTTATATCCAATTG+AGG | + | chr5_2:41407457-41407476 | None:intergenic | 35.0% |
| ! | TGTATGCAAAATGATGGTGA+TGG | + | chr5_2:41407553-41407572 | None:intergenic | 35.0% |
| ! | GGCAATTAGGCTTGTTTAAT+TGG | + | chr5_2:41408050-41408069 | None:intergenic | 35.0% |
| AATACATGGCATAGGCAATT+AGG | + | chr5_2:41408063-41408082 | None:intergenic | 35.0% | |
| CTTATGAGAATACATGGCAT+AGG | + | chr5_2:41408071-41408090 | None:intergenic | 35.0% | |
| ! | CAAACTTGTTCCAAAGTGTA+AGG | + | chr5_2:41408278-41408297 | None:intergenic | 35.0% |
| !! | CTTACACTTTGGAACAAGTT+TGG | - | chr5_2:41408276-41408295 | Msa0770530:intron | 35.0% |
| ! | TTTAAGGTTTCTTGTCAGAC+AGG | - | chr5_2:41408327-41408346 | Msa0770530:intron | 35.0% |
| TGAAAAATGAGTGTGATGTG+AGG | + | chr5_2:41408628-41408647 | None:intergenic | 35.0% | |
| ! | TTTTGTTAGTCGAGTCGTTT+GGG | + | chr5_2:41408694-41408713 | None:intergenic | 35.0% |
| ! | ATTTTGTTAGTCGAGTCGTT+TGG | + | chr5_2:41408695-41408714 | None:intergenic | 35.0% |
| ! | GTTGATGGATGAATTGAACT+TGG | + | chr5_2:41408742-41408761 | None:intergenic | 35.0% |
| ! | GTGTTAAGTTGTTCATGTGA+AGG | + | chr5_2:41408812-41408831 | None:intergenic | 35.0% |
| !! | TTAGAGATTCTTGGTGTTAG+AGG | + | chr5_2:41409203-41409222 | None:intergenic | 35.0% |
| TAGGAGCTAAATTGAAGCTT+GGG | + | chr5_2:41409226-41409245 | None:intergenic | 35.0% | |
| TTTGAGAAGAGAAGAGTTAG+AGG | + | chr5_2:41409300-41409319 | None:intergenic | 35.0% | |
| CTCATCTCACAAACCTTAAT+GGG | - | chr5_2:41409387-41409406 | Msa0770530:intron | 35.0% | |
| TACTACACCCTATAGTAACT+TGG | - | chr5_2:41409503-41409522 | Msa0770530:intron | 35.0% | |
| !! | TTTTGGTCATTTTGAGTGCA+GGG | + | chr5_2:41409587-41409606 | None:intergenic | 35.0% |
| !! | ATTTTGGTCATTTTGAGTGC+AGG | + | chr5_2:41409588-41409607 | None:intergenic | 35.0% |
| !!! | GAGGGGTATTTTAGTCATTT+TGG | + | chr5_2:41409621-41409640 | None:intergenic | 35.0% |
| TCGTAGAATTCGGTATTAGA+GGG | + | chr5_2:41409639-41409658 | None:intergenic | 35.0% | |
| ATCGTAGAATTCGGTATTAG+AGG | + | chr5_2:41409640-41409659 | None:intergenic | 35.0% | |
| ! | TATTGCCACTGTGTGTATTT+TGG | + | chr5_2:41409669-41409688 | None:intergenic | 35.0% |
| ! | TAGGGTTTTTCCACCTAAAA+CGG | + | chr5_2:41409894-41409913 | None:intergenic | 35.0% |
| GGGTTAAGAGAGTGAAAAAT+AGG | + | chr5_2:41409913-41409932 | None:intergenic | 35.0% | |
| ! | GGTGTTCACTTTATGGATTT+TGG | + | chr5_2:41410301-41410320 | None:intergenic | 35.0% |
| CTCATATGATTGAAGGATTG+AGG | + | chr5_2:41410322-41410341 | None:intergenic | 35.0% | |
| GAAGGATCTCATATGATTGA+AGG | + | chr5_2:41410329-41410348 | None:intergenic | 35.0% | |
| GGAAATCGAAGGAATCTATA+CGG | + | chr5_2:41410378-41410397 | None:intergenic | 35.0% | |
| TCAATATCTAGGGAAATCGA+AGG | + | chr5_2:41410389-41410408 | None:intergenic | 35.0% | |
| ! | TTTTCTCCTCTACAAGCTAT+GGG | + | chr5_2:41410425-41410444 | None:intergenic | 35.0% |
| ACAATAGTTCGAAGCTTTCA+AGG | + | chr5_2:41410493-41410512 | None:intergenic | 35.0% | |
| TGAAAGCTTCGAACTATTGT+TGG | - | chr5_2:41410493-41410512 | Msa0770530:intron | 35.0% | |
| ACTATTGTTGGTCGATATGA+CGG | - | chr5_2:41410505-41410524 | Msa0770530:intron | 35.0% | |
| CATCTATACAAGTGTGCAAA+AGG | - | chr5_2:41411164-41411183 | Msa0770530:intron | 35.0% | |
| TCTATACAAGTGTGCAAAAG+GGG | - | chr5_2:41411166-41411185 | Msa0770530:intron | 35.0% | |
| AAATCTTCTGGACAAGTAGT+GGG | + | chr5_2:41411583-41411602 | None:intergenic | 35.0% | |
| TTAATACACCGCGTAATCAT+TGG | + | chr5_2:41411616-41411635 | None:intergenic | 35.0% | |
| GAGGTATAAAGTCCATCATA+TGG | - | chr5_2:41411793-41411812 | Msa0770530:intron | 35.0% | |
| TATCACATACCATGCAAGTA+TGG | - | chr5_2:41411987-41412006 | Msa0770530:intron | 35.0% | |
| ! | GGCTTTGTACTCTTTAATGA+TGG | - | chr5_2:41412008-41412027 | Msa0770530:intron | 35.0% |
| GTGCCAGAGGATTAATATTA+CGG | - | chr5_2:41412236-41412255 | Msa0770530:intron | 35.0% | |
| TGCCAGAGGATTAATATTAC+GGG | - | chr5_2:41412237-41412256 | Msa0770530:intron | 35.0% | |
| TTCCCGTAATATTAATCCTC+TGG | + | chr5_2:41412242-41412261 | None:intergenic | 35.0% | |
| ! | AAGTTTTCCTCAAGAGCTTA+TGG | - | chr5_2:41412533-41412552 | Msa0770530:intron | 35.0% |
| AAAAATCTCTTTGTGAGGGA+AGG | + | chr5_2:41412592-41412611 | None:intergenic | 35.0% | |
| AAGGGTAGGATATCTATCTA+TGG | + | chr5_2:41412812-41412831 | None:intergenic | 35.0% | |
| ATAGATAGATATCCTACCCT+TGG | - | chr5_2:41412811-41412830 | Msa0770530:intron | 35.0% | |
| TAGATAGATATCCTACCCTT+GGG | - | chr5_2:41412812-41412831 | Msa0770530:intron | 35.0% | |
| ATAAACATAATCCCAAGGGT+AGG | + | chr5_2:41412826-41412845 | None:intergenic | 35.0% | |
| ! | GGGGTACTAAACATAATACT+TGG | + | chr5_2:41412881-41412900 | None:intergenic | 35.0% |
| ACAATCTCACTCGAATTACG+GGG | + | chr5_2:41406659-41406678 | None:intergenic | 40.0% | |
| GACAATCTCACTCGAATTAC+GGG | + | chr5_2:41406660-41406679 | None:intergenic | 40.0% | |
| TATTCCCTTGTTCCCTGTAT+TGG | - | chr5_2:41406706-41406725 | Msa0770530:CDS | 40.0% | |
| CATAACCAATACAGGGAACA+AGG | + | chr5_2:41406714-41406733 | None:intergenic | 40.0% | |
| GATCCTTAATAGTCCACTGT+TGG | - | chr5_2:41406838-41406857 | Msa0770530:intron | 40.0% | |
| GACTCATTCTGACTGAAACA+AGG | - | chr5_2:41406888-41406907 | Msa0770530:intron | 40.0% | |
| CTCATTCTGACTGAAACAAG+GGG | - | chr5_2:41406890-41406909 | Msa0770530:intron | 40.0% | |
| ! | TTTTCAATAAGGCTCGCGTA+GGG | + | chr5_2:41406973-41406992 | None:intergenic | 40.0% |
| GAAACTAATGAATGTCGGGT+CGG | - | chr5_2:41407176-41407195 | Msa0770530:CDS | 40.0% | |
| AAACTAATGAATGTCGGGTC+GGG | - | chr5_2:41407177-41407196 | Msa0770530:CDS | 40.0% | |
| TCCGATCGAAAACAAATCAG+TGG | - | chr5_2:41407302-41407321 | Msa0770530:CDS | 40.0% | |
| !!! | CCCACTGATTTGTTTTCGAT+CGG | + | chr5_2:41407306-41407325 | None:intergenic | 40.0% |
| CCGATCGAAAACAAATCAGT+GGG | - | chr5_2:41407303-41407322 | Msa0770530:CDS | 40.0% | |
| CGATCGAAAACAAATCAGTG+GGG | - | chr5_2:41407304-41407323 | Msa0770530:CDS | 40.0% | |
| TAACGCATATTCACTCGTAC+CGG | + | chr5_2:41407335-41407354 | None:intergenic | 40.0% | |
| CTTGAGGTGATTACGAAGTT+CGG | + | chr5_2:41407398-41407417 | None:intergenic | 40.0% | |
| !! | CGATGTTTTTGTTGCATCGA+AGG | + | chr5_2:41407428-41407447 | None:intergenic | 40.0% |
| GTTCATGCATTCATGACTGA+TGG | + | chr5_2:41407482-41407501 | None:intergenic | 40.0% | |
| GTGGAAATGTGGCAACTATA+AGG | + | chr5_2:41407817-41407836 | None:intergenic | 40.0% | |
| !!! | CATCTAGGGGTGTTTTATGA+CGG | + | chr5_2:41408242-41408261 | None:intergenic | 40.0% |
| TAAAACACCCCTAGATGGTT+AGG | - | chr5_2:41408245-41408264 | Msa0770530:intron | 40.0% | |
| GCTTTATCCTAACCATCTAG+GGG | + | chr5_2:41408255-41408274 | None:intergenic | 40.0% | |
| ! | GGCTTTATCCTAACCATCTA+GGG | + | chr5_2:41408256-41408275 | None:intergenic | 40.0% |
| AGGATAAAGCCCTTACACTT+TGG | - | chr5_2:41408265-41408284 | Msa0770530:intron | 40.0% | |
| GGAACAAGTTTGGAAGCAAT+TGG | - | chr5_2:41408286-41408305 | Msa0770530:intron | 40.0% | |
| TGGAAAAATCGTGTCACGAT+GGG | + | chr5_2:41408371-41408390 | None:intergenic | 40.0% | |
| ! | TTTTATGCGCGAAAACGTGA+AGG | + | chr5_2:41408489-41408508 | None:intergenic | 40.0% |
| TAGGAGAATGTAGGCGAAAA+CGG | + | chr5_2:41408538-41408557 | None:intergenic | 40.0% | |
| GCTAAGTGTTAGGAGAATGT+AGG | + | chr5_2:41408547-41408566 | None:intergenic | 40.0% | |
| ! | ATGAGTGTGATGTGAGGTTT+TGG | + | chr5_2:41408622-41408641 | None:intergenic | 40.0% |
| ! | GGCTGAGTTTTTGATGTTGA+TGG | + | chr5_2:41408757-41408776 | None:intergenic | 40.0% |
| !! | TCTTGGTGTTAGAGGTAAGA+GGG | + | chr5_2:41409195-41409214 | None:intergenic | 40.0% |
| !! | TTCTTGGTGTTAGAGGTAAG+AGG | + | chr5_2:41409196-41409215 | None:intergenic | 40.0% |
| ! | AAGCTTGGGTTAGAGATTCT+TGG | + | chr5_2:41409212-41409231 | None:intergenic | 40.0% |
| CTAGGAGCTAAATTGAAGCT+TGG | + | chr5_2:41409227-41409246 | None:intergenic | 40.0% | |
| CAAGAGGAGATTCATCATCT+AGG | + | chr5_2:41409245-41409264 | None:intergenic | 40.0% | |
| GCTCATCTCACAAACCTTAA+TGG | - | chr5_2:41409386-41409405 | Msa0770530:intron | 40.0% | |
| !! | GAAATGGGTTAGACCCATTA+AGG | + | chr5_2:41409403-41409422 | None:intergenic | 40.0% |
| ! | TAACACTAACGGACACTTAC+CGG | - | chr5_2:41409467-41409486 | Msa0770530:intron | 40.0% |
| !! | TTTGGTCATTTTGAGTGCAG+GGG | + | chr5_2:41409586-41409605 | None:intergenic | 40.0% |
| !!! | TTTTGGACTTAGGGGCATTT+TGG | + | chr5_2:41409604-41409623 | None:intergenic | 40.0% |
| CGTAGAATTCGGTATTAGAG+GGG | + | chr5_2:41409638-41409657 | None:intergenic | 40.0% | |
| TGGTTGGGAATCGTAGAATT+CGG | + | chr5_2:41409649-41409668 | None:intergenic | 40.0% | |
| !!! | CCACTGTGTGTATTTTGGTT+GGG | + | chr5_2:41409664-41409683 | None:intergenic | 40.0% |
| !! | CTTGTTTTCCAAGCCGTTTT+AGG | - | chr5_2:41409878-41409897 | Msa0770530:intron | 40.0% |
| ! | TTTTTCCACCTAAAACGGCT+TGG | + | chr5_2:41409889-41409908 | None:intergenic | 40.0% |
| AAAGTTTGCAGTACATGGCA+AGG | - | chr5_2:41409988-41410007 | Msa0770530:intron | 40.0% | |
| AAGTTTGCAGTACATGGCAA+GGG | - | chr5_2:41409989-41410008 | Msa0770530:intron | 40.0% | |
| ! | CACTTTATGGATTTTGGGCT+CGG | + | chr5_2:41410295-41410314 | None:intergenic | 40.0% |
| ! | GGATTGAGGTGTTCACTTTA+TGG | + | chr5_2:41410308-41410327 | None:intergenic | 40.0% |
| CGAAGGAATCTATACGGAAA+AGG | + | chr5_2:41410372-41410391 | None:intergenic | 40.0% | |
| ! | GAAAAACCCATAGCTTGTAG+AGG | - | chr5_2:41410416-41410435 | Msa0770530:intron | 40.0% |
| ! | CTTTTCTCCTCTACAAGCTA+TGG | + | chr5_2:41410426-41410445 | None:intergenic | 40.0% |
| CGAAGCTTTCAAGGAATTTG+AGG | + | chr5_2:41410484-41410503 | None:intergenic | 40.0% | |
| CTATTGTTGGTCGATATGAC+GGG | - | chr5_2:41410506-41410525 | Msa0770530:intron | 40.0% | |
| TATTGTTGGTCGATATGACG+GGG | - | chr5_2:41410507-41410526 | Msa0770530:intron | 40.0% | |
| ATCATGATACAATTGCGCCA+AGG | - | chr5_2:41410629-41410648 | Msa0770530:intron | 40.0% | |
| ! | AGTGGGATTTTCACATGGAA+CGG | + | chr5_2:41411566-41411585 | None:intergenic | 40.0% |
| !! | CAAGTAGTGGGATTTTCACA+TGG | + | chr5_2:41411571-41411590 | None:intergenic | 40.0% |
| GAAATCTTCTGGACAAGTAG+TGG | + | chr5_2:41411584-41411603 | None:intergenic | 40.0% | |
| !! | TATTCTGGTTCGGCATATTC+AGG | + | chr5_2:41411661-41411680 | None:intergenic | 40.0% |
| TATGCCGAACCAGAATATGA+TGG | - | chr5_2:41411664-41411683 | Msa0770530:intron | 40.0% | |
| ! | AGGACCATCATATTCTGGTT+CGG | + | chr5_2:41411671-41411690 | None:intergenic | 40.0% |
| AGAATATGATGGTCCTGAAC+CGG | - | chr5_2:41411675-41411694 | Msa0770530:intron | 40.0% | |
| ! | TCCATCATATGGAGTGTTTG+AGG | - | chr5_2:41411804-41411823 | Msa0770530:intron | 40.0% |
| ! | CCATCATATGGAGTGTTTGA+GGG | - | chr5_2:41411805-41411824 | Msa0770530:intron | 40.0% |
| AGTACAAAGCCATACTTGCA+TGG | + | chr5_2:41411999-41412018 | None:intergenic | 40.0% | |
| AATATTCCGATACTGACAGG+CGG | + | chr5_2:41412205-41412224 | None:intergenic | 40.0% | |
| TGTTGTATCTATCACGCTTG+AGG | - | chr5_2:41412320-41412339 | Msa0770530:intron | 40.0% | |
| CTAGAGAGAGAAAGAAGATG+GGG | + | chr5_2:41412412-41412431 | None:intergenic | 40.0% | |
| CCTAGAGAGAGAAAGAAGAT+GGG | + | chr5_2:41412413-41412432 | None:intergenic | 40.0% | |
| ACCTAGAGAGAGAAAGAAGA+TGG | + | chr5_2:41412414-41412433 | None:intergenic | 40.0% | |
| AGAAAGGATTGAGGAAGAGA+GGG | + | chr5_2:41412481-41412500 | None:intergenic | 40.0% | |
| TAGAAAGGATTGAGGAAGAG+AGG | + | chr5_2:41412482-41412501 | None:intergenic | 40.0% | |
| CTAAACACCATAAGCTCTTG+AGG | + | chr5_2:41412543-41412562 | None:intergenic | 40.0% | |
| GCTTATGGTGTTTAGAAGCT+TGG | - | chr5_2:41412548-41412567 | Msa0770530:intron | 40.0% | |
| TGGTGTTTAGAAGCTTGGTT+TGG | - | chr5_2:41412553-41412572 | Msa0770530:intron | 40.0% | |
| GGTGTTTAGAAGCTTGGTTT+GGG | - | chr5_2:41412554-41412573 | Msa0770530:intron | 40.0% | |
| !! | AGAGATTAGGGTTTTGGTGA+AGG | - | chr5_2:41412614-41412633 | Msa0770530:intron | 40.0% |
| CATGGATCATAGAAGCTACT+TGG | - | chr5_2:41412667-41412686 | Msa0770530:intron | 40.0% | |
| TCATGGATGAAGCATAAGCT+AGG | - | chr5_2:41412737-41412756 | Msa0770530:intron | 40.0% | |
| CATGGATGAAGCATAAGCTA+GGG | - | chr5_2:41412738-41412757 | Msa0770530:intron | 40.0% | |
| GCCGTAACAAGAACATGTTT+AGG | - | chr5_2:41412780-41412799 | Msa0770530:intron | 40.0% | |
| ! | TCACGTTTTCTGCAGAATTC+TGG | - | chr5_2:41413023-41413042 | Msa0770530:CDS | 40.0% |
| TCATGGCGCAAAAGCAGATA+TGG | - | chr5_2:41406678-41406697 | Msa0770530:CDS | 45.0% | |
| TACAGGGAACAAGGGAATAC+CGG | + | chr5_2:41406705-41406724 | None:intergenic | 45.0% | |
| CCTTAATAGTCCACTGTTGG+CGG | - | chr5_2:41406841-41406860 | Msa0770530:intron | 45.0% | |
| TTTCAGTCAGAATGAGTCCC+CGG | + | chr5_2:41406886-41406905 | None:intergenic | 45.0% | |
| ATTCTGACTGAAACAAGGGG+TGG | - | chr5_2:41406893-41406912 | Msa0770530:intron | 45.0% | |
| TTCTGACTGAAACAAGGGGT+GGG | - | chr5_2:41406894-41406913 | Msa0770530:intron | 45.0% | |
| TTTCAATAAGGCTCGCGTAG+GGG | + | chr5_2:41406972-41406991 | None:intergenic | 45.0% | |
| ! | GTTTTCAATAAGGCTCGCGT+AGG | + | chr5_2:41406974-41406993 | None:intergenic | 45.0% |
| AACTAATGAATGTCGGGTCG+GGG | - | chr5_2:41407178-41407197 | Msa0770530:CDS | 45.0% | |
| !!! | TTTTTTGGTGTCGTAGGGGA+GGG | + | chr5_2:41407369-41407388 | None:intergenic | 45.0% |
| !!! | TTTTTTTGGTGTCGTAGGGG+AGG | + | chr5_2:41407370-41407389 | None:intergenic | 45.0% |
| !!! | CGGTTTTTTTGGTGTCGTAG+GGG | + | chr5_2:41407373-41407392 | None:intergenic | 45.0% |
| !!! | CCGGTTTTTTTGGTGTCGTA+GGG | + | chr5_2:41407374-41407393 | None:intergenic | 45.0% |
| CCCTACGACACCAAAAAAAC+CGG | - | chr5_2:41407371-41407390 | Msa0770530:intron | 45.0% | |
| CCTACGACACCAAAAAAACC+GGG | - | chr5_2:41407372-41407391 | Msa0770530:intron | 45.0% | |
| CGAACTTCGTAATCACCTCA+AGG | - | chr5_2:41407396-41407415 | Msa0770530:intron | 45.0% | |
| CATGCATTCATGACTGATGG+TGG | + | chr5_2:41407479-41407498 | None:intergenic | 45.0% | |
| !! | GCAAAATGATGGTGATGGTG+AGG | + | chr5_2:41407548-41407567 | None:intergenic | 45.0% |
| !!! | GTGAGTTTTGGAGACGAACT+TGG | + | chr5_2:41407994-41408013 | None:intergenic | 45.0% |
| GTCACATGTACGTGTAGTTG+AGG | - | chr5_2:41408090-41408109 | Msa0770530:CDS | 45.0% | |
| CGTCATAAAACACCCCTAGA+TGG | - | chr5_2:41408240-41408259 | Msa0770530:intron | 45.0% | |
| ! | GGGCTTTATCCTAACCATCT+AGG | + | chr5_2:41408257-41408276 | None:intergenic | 45.0% |
| TTTCTTGTCAGACAGGATCG+TGG | - | chr5_2:41408334-41408353 | Msa0770530:intron | 45.0% | |
| CTGGAAAAATCGTGTCACGA+TGG | + | chr5_2:41408372-41408391 | None:intergenic | 45.0% | |
| !! | GAAATTTCTGGTCACCATCG+TGG | - | chr5_2:41408405-41408424 | Msa0770530:intron | 45.0% |
| ACTAAGAACGTGCCACAATG+CGG | + | chr5_2:41408441-41408460 | None:intergenic | 45.0% | |
| !! | CGGCATCGAAAACGGATTAA+CGG | + | chr5_2:41408518-41408537 | None:intergenic | 45.0% |
| TCGAGTCGTTTGGGAGAAAA+CGG | + | chr5_2:41408685-41408704 | None:intergenic | 45.0% | |
| GTGTTAGAGGTAAGAGGGTT+AGG | + | chr5_2:41409190-41409209 | None:intergenic | 45.0% | |
| AGAACAAGAGCAAGGGTTAG+AGG | + | chr5_2:41409268-41409287 | None:intergenic | 45.0% | |
| AGAGGGAAGAACAAGAGCAA+GGG | + | chr5_2:41409275-41409294 | None:intergenic | 45.0% | |
| TAGAGGGAAGAACAAGAGCA+AGG | + | chr5_2:41409276-41409295 | None:intergenic | 45.0% | |
| GAGAAGAGTTAGAGGCTAGA+GGG | + | chr5_2:41409292-41409311 | None:intergenic | 45.0% | |
| AGAGAAGAGTTAGAGGCTAG+AGG | + | chr5_2:41409293-41409312 | None:intergenic | 45.0% | |
| CCCAACCAAAATACACACAG+TGG | - | chr5_2:41409661-41409680 | Msa0770530:intron | 45.0% | |
| !!! | GCCACTGTGTGTATTTTGGT+TGG | + | chr5_2:41409665-41409684 | None:intergenic | 45.0% |
| !! | GTTTTCCAAGCCGTTTTAGG+TGG | - | chr5_2:41409881-41409900 | Msa0770530:intron | 45.0% |
| AAGCATCAGAGCTTCAAGGA+AGG | - | chr5_2:41410014-41410033 | Msa0770530:intron | 45.0% | |
| AGCATCAGAGCTTCAAGGAA+GGG | - | chr5_2:41410015-41410034 | Msa0770530:intron | 45.0% | |
| ! | GTCGATATGACGGGGATAAT+GGG | - | chr5_2:41410515-41410534 | Msa0770530:intron | 45.0% |
| ATACACCGCGTAATCATTGG+AGG | + | chr5_2:41411613-41411632 | None:intergenic | 45.0% | |
| GGTTCAGGACCATCATATTC+TGG | + | chr5_2:41411676-41411695 | None:intergenic | 45.0% | |
| TGATCATCGTATTCCGGTTC+AGG | + | chr5_2:41411691-41411710 | None:intergenic | 45.0% | |
| ACCGGAATACGATGATCACA+AGG | - | chr5_2:41411693-41411712 | Msa0770530:intron | 45.0% | |
| CCCTTGTGATCATCGTATTC+CGG | + | chr5_2:41411697-41411716 | None:intergenic | 45.0% | |
| CCGGAATACGATGATCACAA+GGG | - | chr5_2:41411694-41411713 | Msa0770530:intron | 45.0% | |
| CCCTCAAACACTCCATATGA+TGG | + | chr5_2:41411808-41411827 | None:intergenic | 45.0% | |
| AATATCCCGCCTGTCAGTAT+CGG | - | chr5_2:41412196-41412215 | Msa0770530:intron | 45.0% | |
| ATATTCCGATACTGACAGGC+GGG | + | chr5_2:41412204-41412223 | None:intergenic | 45.0% | |
| TTAATAGTCGATCGTGCCAG+AGG | - | chr5_2:41412223-41412242 | Msa0770530:intron | 45.0% | |
| TATCTATCACGCTTGAGGCA+AGG | - | chr5_2:41412325-41412344 | Msa0770530:intron | 45.0% | |
| ATCTATCACGCTTGAGGCAA+GGG | - | chr5_2:41412326-41412345 | Msa0770530:intron | 45.0% | |
| CCCATCTTCTTTCTCTCTCT+AGG | - | chr5_2:41412410-41412429 | Msa0770530:intron | 45.0% | |
| !! | TGGTGAAGGAAGTGTTGAGT+TGG | - | chr5_2:41412628-41412647 | Msa0770530:intron | 45.0% |
| GGAATAGAGATGAGCAAGCA+TGG | - | chr5_2:41412649-41412668 | Msa0770530:intron | 45.0% | |
| CATAAGCTAGGGTTTGAGCT+TGG | - | chr5_2:41412749-41412768 | Msa0770530:intron | 45.0% | |
| ! | CATGGCAAAATTTTTCGCCG+TGG | + | chr5_2:41413134-41413153 | None:intergenic | 45.0% |
| ! | CACGGCGAAAAATTTTGCCA+TGG | - | chr5_2:41413132-41413151 | Msa0770530:CDS | 45.0% |
| ! | GGCGAAAAATTTTGCCATGG+CGG | - | chr5_2:41413135-41413154 | Msa0770530:CDS | 45.0% |
| ! | ATTTCGTTTTGTGGCCAGCA+AGG | - | chr5_2:41413202-41413221 | Msa0770530:CDS | 45.0% |
| ! | TTTCGTTTTGTGGCCAGCAA+GGG | - | chr5_2:41413203-41413222 | Msa0770530:CDS | 45.0% |
| !! | AAAAAAAAAATTCTTATATT+TGG | - | chr5_2:41411126-41411145 | Msa0770530:intron | 5.0% |
| !! | AAAAAAAAATTCTTATATTT+GGG | - | chr5_2:41411127-41411146 | Msa0770530:intron | 5.0% |
| GAAACTTGCACGTGTGGTTC+TGG | - | chr5_2:41406596-41406615 | Msa0770530:CDS | 50.0% | |
| GCGCAAAAGCAGATATGGTC+CGG | - | chr5_2:41406683-41406702 | Msa0770530:CDS | 50.0% | |
| TCCGTTTGATCTCCCAGAAG+CGG | - | chr5_2:41406769-41406788 | Msa0770530:intron | 50.0% | |
| ! | TCCGCTTCTGGGAGATCAAA+CGG | + | chr5_2:41406773-41406792 | None:intergenic | 50.0% |
| CTGATTCAGCTTCCGCTTCT+GGG | + | chr5_2:41406784-41406803 | None:intergenic | 50.0% | |
| ! | ACTGATTCAGCTTCCGCTTC+TGG | + | chr5_2:41406785-41406804 | None:intergenic | 50.0% |
| !! | CCGCCAACAGTGGACTATTA+AGG | + | chr5_2:41406844-41406863 | None:intergenic | 50.0% |
| TTCAGTCAGAATGAGTCCCC+GGG | + | chr5_2:41406885-41406904 | None:intergenic | 50.0% | |
| TGATAGGAGTAGGTGCTTGC+TGG | - | chr5_2:41407132-41407151 | Msa0770530:CDS | 50.0% | |
| GATAGGAGTAGGTGCTTGCT+GGG | - | chr5_2:41407133-41407152 | Msa0770530:CDS | 50.0% | |
| ! | ATAGGAGTAGGTGCTTGCTG+GGG | - | chr5_2:41407134-41407153 | Msa0770530:CDS | 50.0% |
| ACTAATGAATGTCGGGTCGG+GGG | - | chr5_2:41407179-41407198 | Msa0770530:CDS | 50.0% | |
| GGTAAAGCAAACTCCCTCCT+TGG | - | chr5_2:41407231-41407250 | Msa0770530:CDS | 50.0% | |
| GGGGCTTAGTCAAGTAGAAC+CGG | - | chr5_2:41407262-41407281 | Msa0770530:CDS | 50.0% | |
| GGGCTTAGTCAAGTAGAACC+GGG | - | chr5_2:41407263-41407282 | Msa0770530:CDS | 50.0% | |
| ! | CATATTCACTCGTACCGGCA+TGG | + | chr5_2:41407330-41407349 | None:intergenic | 50.0% |
| !!! | CCCGGTTTTTTTGGTGTCGT+AGG | + | chr5_2:41407375-41407394 | None:intergenic | 50.0% |
| !!! | GAAGTTCGGCCCGGTTTTTT+TGG | + | chr5_2:41407384-41407403 | None:intergenic | 50.0% |
| !! | GCATTCATGACTGATGGTGG+CGG | + | chr5_2:41407476-41407495 | None:intergenic | 50.0% |
| TAAGAACGTGCCACAATGCG+GGG | + | chr5_2:41408439-41408458 | None:intergenic | 50.0% | |
| CTAAGAACGTGCCACAATGC+GGG | + | chr5_2:41408440-41408459 | None:intergenic | 50.0% | |
| ! | GGCGAAAACGGCATCGAAAA+CGG | + | chr5_2:41408526-41408545 | None:intergenic | 50.0% |
| CGAGTCGTTTGGGAGAAAAC+GGG | + | chr5_2:41408684-41408703 | None:intergenic | 50.0% | |
| GGTCAAGCATCAGAGCTTCA+AGG | - | chr5_2:41410010-41410029 | Msa0770530:intron | 50.0% | |
| !! | TTGGGCTCGGATCAAGTTGA+AGG | + | chr5_2:41410282-41410301 | None:intergenic | 50.0% |
| ! | GGTCGATATGACGGGGATAA+TGG | - | chr5_2:41410514-41410533 | Msa0770530:intron | 50.0% |
| ! | GGAGGCGTACAGAAATCTTC+TGG | + | chr5_2:41411595-41411614 | None:intergenic | 50.0% |
| GTACGCCTCCAATGATTACG+CGG | - | chr5_2:41411605-41411624 | Msa0770530:intron | 50.0% | |
| CTCCCTTCTCTCTTCTCCAT+CGG | - | chr5_2:41412452-41412471 | Msa0770530:intron | 50.0% | |
| AAGGATTGAGGAAGAGAGGG+AGG | + | chr5_2:41412478-41412497 | None:intergenic | 50.0% | |
| TAGGGTTTGAGCTTGGAGCT+TGG | - | chr5_2:41412756-41412775 | Msa0770530:intron | 50.0% | |
| AGCTAAATGGCGAGCTACTC+CGG | + | chr5_2:41413109-41413128 | None:intergenic | 50.0% | |
| ! | TTGCCATGGCGGAGAGAATT+TGG | - | chr5_2:41413146-41413165 | Msa0770530:CDS | 50.0% |
| GTTGTGCAGTCAATTTCGCC+TGG | + | chr5_2:41413172-41413191 | None:intergenic | 50.0% | |
| GATACTGCAAGATCGAGCCT+CGG | + | chr5_2:41413233-41413252 | None:intergenic | 50.0% | |
| CGTGCAAGTTTCCCTGCATG+TGG | + | chr5_2:41406588-41406607 | None:intergenic | 55.0% | |
| TGCAGGGAAACTTGCACGTG+TGG | - | chr5_2:41406590-41406609 | Msa0770530:CDS | 55.0% | |
| GCGGAAGCTGAATCAGTTGC+AGG | - | chr5_2:41406788-41406807 | Msa0770530:intron | 55.0% | |
| !! | ACATTGGCTTCCGCCAACAG+TGG | + | chr5_2:41406854-41406873 | None:intergenic | 55.0% |
| !!! | GTAGGGGCGCTCACGTTTTT+TGG | + | chr5_2:41406956-41406975 | None:intergenic | 55.0% |
| ACAAATCAGTGGGGCCATGC+CGG | - | chr5_2:41407313-41407332 | Msa0770530:CDS | 55.0% | |
| GGTGATTACGAAGTTCGGCC+CGG | + | chr5_2:41407393-41407412 | None:intergenic | 55.0% | |
| CATCGAAGGTGACGACCTTG+AGG | + | chr5_2:41407414-41407433 | None:intergenic | 55.0% | |
| GAGCAAGGGTTAGAGGCAAG+AGG | + | chr5_2:41409261-41409280 | None:intergenic | 55.0% | |
| TGGTTGTTGTCCCATGCGCA+GGG | + | chr5_2:41409785-41409804 | None:intergenic | 55.0% | |
| ATGGTTGTTGTCCCATGCGC+AGG | + | chr5_2:41409786-41409805 | None:intergenic | 55.0% | |
| GGCCGATGGAGAAGAGAGAA+GGG | + | chr5_2:41412457-41412476 | None:intergenic | 55.0% | |
| AGGCCGATGGAGAAGAGAGA+AGG | + | chr5_2:41412458-41412477 | None:intergenic | 55.0% | |
| ATGGCGAGCTAAATTCCGCC+TGG | + | chr5_2:41413063-41413082 | None:intergenic | 55.0% | |
| ! | AGGCGGAATTTAGCTCGCCA+TGG | - | chr5_2:41413062-41413081 | Msa0770530:CDS | 55.0% |
| TTTCGCCGTGGCGAGCTAAA+TGG | + | chr5_2:41413122-41413141 | None:intergenic | 55.0% | |
| TGGCCAAATTCTCTCCGCCA+TGG | + | chr5_2:41413152-41413171 | None:intergenic | 55.0% | |
| ! | ATGGCGGAGAGAATTTGGCC+AGG | - | chr5_2:41413151-41413170 | Msa0770530:CDS | 55.0% |
| !! | CTTGCACGTGTGGTTCTGGC+CGG | - | chr5_2:41406600-41406619 | Msa0770530:CDS | 60.0% |
| !! | TTGCACGTGTGGTTCTGGCC+GGG | - | chr5_2:41406601-41406620 | Msa0770530:CDS | 60.0% |
| GTACAGTATACCGGGGTCCC+CGG | + | chr5_2:41406622-41406641 | None:intergenic | 60.0% | |
| GTTGGCGGAAGCCAATGTCC+CGG | - | chr5_2:41406856-41406875 | Msa0770530:intron | 60.0% | |
| TTGGCGGAAGCCAATGTCCC+GGG | - | chr5_2:41406857-41406876 | Msa0770530:intron | 60.0% | |
| ACTCCCTCCTTGGACGAGCA+CGG | - | chr5_2:41407241-41407260 | Msa0770530:CDS | 60.0% | |
| GAGCATCAAGCAGCGCAACC+CGG | + | chr5_2:41407284-41407303 | None:intergenic | 60.0% | |
| TCAGACAGGATCGTGGCACG+TGG | - | chr5_2:41408341-41408360 | Msa0770530:intron | 60.0% | |
| CAGACAGGATCGTGGCACGT+GGG | - | chr5_2:41408342-41408361 | Msa0770530:intron | 60.0% | |
| TGGTCACCATCGTGGCACGT+TGG | - | chr5_2:41408413-41408432 | Msa0770530:intron | 60.0% | |
| GGTTGTTGTCCCATGCGCAG+GGG | + | chr5_2:41409784-41409803 | None:intergenic | 60.0% | |
| ! | TGGTGCGTAGGGGGTGCATA+GGG | + | chr5_2:41409814-41409833 | None:intergenic | 60.0% |
| ! | TTGGTGCGTAGGGGGTGCAT+AGG | + | chr5_2:41409815-41409834 | None:intergenic | 60.0% |
| !! | CGCATGGTTTGGTGCGTAGG+GGG | + | chr5_2:41409823-41409842 | None:intergenic | 60.0% |
| !! | GCGCATGGTTTGGTGCGTAG+GGG | + | chr5_2:41409824-41409843 | None:intergenic | 60.0% |
| !! | GGCGCATGGTTTGGTGCGTA+GGG | + | chr5_2:41409825-41409844 | None:intergenic | 60.0% |
| !! | AGGCGCATGGTTTGGTGCGT+AGG | + | chr5_2:41409826-41409845 | None:intergenic | 60.0% |
| CATGCGCAAGGCGCATGGTT+TGG | + | chr5_2:41409834-41409853 | None:intergenic | 60.0% | |
| CAAACCATGCGCCTTGCGCA+TGG | - | chr5_2:41409832-41409851 | Msa0770530:intron | 60.0% | |
| ATGTCCATGCGCAAGGCGCA+TGG | + | chr5_2:41409839-41409858 | None:intergenic | 60.0% | |
| ATGCGCCTTGCGCATGGACA+TGG | - | chr5_2:41409838-41409857 | Msa0770530:intron | 60.0% | |
| TGCGCCTTGCGCATGGACAT+GGG | - | chr5_2:41409839-41409858 | Msa0770530:intron | 60.0% | |
| CTTCCCCATGTCCATGCGCA+AGG | + | chr5_2:41409846-41409865 | None:intergenic | 60.0% | |
| CTGGACTGCTACAGTTCGCC+AGG | - | chr5_2:41413042-41413061 | Msa0770530:CDS | 60.0% | |
| GACTGCTACAGTTCGCCAGG+CGG | - | chr5_2:41413045-41413064 | Msa0770530:CDS | 60.0% | |
| ! | TTTAGCTCGCCATGGCGAGC+TGG | - | chr5_2:41413070-41413089 | Msa0770530:CDS | 60.0% |
| TTAGCTCGCCATGGCGAGCT+GGG | - | chr5_2:41413071-41413090 | Msa0770530:CDS | 60.0% | |
| ! | GCTCGCCATTTAGCTCGCCA+CGG | - | chr5_2:41413114-41413133 | Msa0770530:CDS | 60.0% |
| CTGAGTCACAGGCAGCGCCT+CGG | - | chr5_2:41406548-41406567 | Msa0770530:CDS | 65.0% | |
| !! | TGCACGTGTGGTTCTGGCCG+GGG | - | chr5_2:41406602-41406621 | Msa0770530:CDS | 65.0% |
| TGGCGGAAGCCAATGTCCCG+GGG | - | chr5_2:41406858-41406877 | Msa0770530:intron | 65.0% | |
| AAGCCAATGTCCCGGGGTCC+CGG | - | chr5_2:41406864-41406883 | Msa0770530:intron | 65.0% | |
| AGAATGAGTCCCCGGGACCC+CGG | + | chr5_2:41406878-41406897 | None:intergenic | 65.0% | |
| CTCCCTCCTTGGACGAGCAC+GGG | - | chr5_2:41407242-41407261 | Msa0770530:CDS | 65.0% | |
| TCCCTCCTTGGACGAGCACG+GGG | - | chr5_2:41407243-41407262 | Msa0770530:CDS | 65.0% | |
| CTAAGCCCCGTGCTCGTCCA+AGG | + | chr5_2:41407251-41407270 | None:intergenic | 65.0% | |
| GGCGCATGGCTTCAAGCGCA+TGG | + | chr5_2:41409763-41409782 | None:intergenic | 65.0% | |
| ! | GGGGGTGCATAGGGCAGTGA+TGG | + | chr5_2:41409805-41409824 | None:intergenic | 65.0% |
| GCGCCTTGCGCATGGACATG+GGG | - | chr5_2:41409840-41409859 | Msa0770530:intron | 65.0% | |
| GAGGAAGAGAGGGAGGCCGA+TGG | + | chr5_2:41412471-41412490 | None:intergenic | 65.0% | |
| TAGCTCGCCATGGCGAGCTG+GGG | - | chr5_2:41413072-41413091 | Msa0770530:CDS | 65.0% | |
| CCATGGCGAGCTGGGGATCA+GGG | - | chr5_2:41413079-41413098 | Msa0770530:CDS | 65.0% | |
| AGCTGGGGATCAGGGCTCTC+CGG | - | chr5_2:41413087-41413106 | Msa0770530:CDS | 65.0% | |
| TGGCCAGCAAGGGCTATCCG+AGG | - | chr5_2:41413213-41413232 | Msa0770530:CDS | 65.0% | |
| GAGCCTCGGATAGCCCTTGC+TGG | + | chr5_2:41413219-41413238 | None:intergenic | 65.0% | |
| AGGCAGCGCCTCGGAAAGCG+CGG | - | chr5_2:41406557-41406576 | Msa0770530:CDS | 70.0% | |
| TGGCTCGTCCGCGCTTTCCG+AGG | + | chr5_2:41406568-41406587 | None:intergenic | 70.0% | |
| AGCGCGGACGAGCCACATGC+AGG | - | chr5_2:41406573-41406592 | Msa0770530:CDS | 70.0% | |
| GCGCGGACGAGCCACATGCA+GGG | - | chr5_2:41406574-41406593 | Msa0770530:CDS | 70.0% | |
| AGCCAATGTCCCGGGGTCCC+GGG | - | chr5_2:41406865-41406884 | Msa0770530:intron | 70.0% | |
| GAATGAGTCCCCGGGACCCC+GGG | + | chr5_2:41406877-41406896 | None:intergenic | 70.0% | |
| GCCCCGTGCTCGTCCAAGGA+GGG | + | chr5_2:41407247-41407266 | None:intergenic | 70.0% | |
| AGCCCCGTGCTCGTCCAAGG+AGG | + | chr5_2:41407248-41407267 | None:intergenic | 70.0% | |
| GGCACGTTGGCCCCGCATTG+TGG | - | chr5_2:41408426-41408445 | Msa0770530:intron | 70.0% | |
| AAGCCATGCGCCCCTGCGCA+TGG | - | chr5_2:41409771-41409790 | Msa0770530:intron | 70.0% | |
| AGCCATGCGCCCCTGCGCAT+GGG | - | chr5_2:41409772-41409791 | Msa0770530:intron | 70.0% | |
| GCCATGGCGAGCTGGGGATC+AGG | - | chr5_2:41413078-41413097 | Msa0770530:CDS | 70.0% | |
| CCCTGATCCCCAGCTCGCCA+TGG | + | chr5_2:41413082-41413101 | None:intergenic | 70.0% | |
| !! | GTGGTTCTGGCCGGGGACCC+CGG | - | chr5_2:41406609-41406628 | Msa0770530:CDS | 75.0% |
| GCCAATGTCCCGGGGTCCCG+GGG | - | chr5_2:41406866-41406885 | Msa0770530:intron | 75.0% | |
| TCCCCGGGACCCCGGGACAT+TGG | + | chr5_2:41406870-41406889 | None:intergenic | 75.0% | |
| GCGGGGCCAACGTGCCACGA+TGG | + | chr5_2:41408422-41408441 | None:intergenic | 75.0% | |
| ! | GTCCCATGCGCAGGGGCGCA+TGG | + | chr5_2:41409777-41409796 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 41406545 | 41413259 | 41406545 | ID=Msa0770530;Name=Msa0770530 |
| chr5_2 | mRNA | 41406545 | 41413259 | 41406545 | ID=Msa0770530-mRNA-1;Parent=Msa0770530;Name=Msa0770530-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.5|1|1|4|0|375 |
| chr5_2 | exon | 41412893 | 41413259 | 41412893 | ID=Msa0770530-mRNA-1:exon:13083;Parent=Msa0770530-mRNA-1 |
| chr5_2 | exon | 41408009 | 41408244 | 41408009 | ID=Msa0770530-mRNA-1:exon:13082;Parent=Msa0770530-mRNA-1 |
| chr5_2 | exon | 41407070 | 41407372 | 41407070 | ID=Msa0770530-mRNA-1:exon:13081;Parent=Msa0770530-mRNA-1 |
| chr5_2 | exon | 41406545 | 41406766 | 41406545 | ID=Msa0770530-mRNA-1:exon:13080;Parent=Msa0770530-mRNA-1 |
| chr5_2 | CDS | 41412893 | 41413259 | 41412893 | ID=Msa0770530-mRNA-1:cds;Parent=Msa0770530-mRNA-1 |
| chr5_2 | CDS | 41408009 | 41408244 | 41408009 | ID=Msa0770530-mRNA-1:cds;Parent=Msa0770530-mRNA-1 |
| chr5_2 | CDS | 41407070 | 41407372 | 41407070 | ID=Msa0770530-mRNA-1:cds;Parent=Msa0770530-mRNA-1 |
| chr5_2 | CDS | 41406545 | 41406766 | 41406545 | ID=Msa0770530-mRNA-1:cds;Parent=Msa0770530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
