Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983490 | QHN95468.1 | 58.889 | 180 | 30 | 3 | 24 | 195 | 89 | 232 | 1.14e-44 | 161 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983490 | A0A072U1X5 | 83.750 | 80 | 13 | 0 | 24 | 103 | 42 | 121 | 9.45e-38 | 139 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069500 | Msa0983490 | 0.828142 | 1.059747e-54 | -8.615850e-47 |
| Msa0697990 | Msa0983490 | 0.806928 | 6.482682e-50 | -8.615850e-47 |
| Msa0770530 | Msa0983490 | 0.801958 | 7.043299e-49 | -8.615850e-47 |
| Msa0433410 | Msa0983490 | 0.813030 | 3.146328e-51 | -8.615850e-47 |
| Msa0983130 | Msa0983490 | 0.808952 | 2.404441e-50 | -8.615850e-47 |
| Msa0983170 | Msa0983490 | 0.855167 | 7.566159e-62 | -8.615850e-47 |
| Msa0983180 | Msa0983490 | 0.847194 | 1.349156e-59 | -8.615850e-47 |
| Msa0983190 | Msa0983490 | 0.874293 | 7.564339e-68 | -8.615850e-47 |
| Msa0983210 | Msa0983490 | 0.855040 | 8.236881e-62 | -8.615850e-47 |
| Msa0983220 | Msa0983490 | 0.984134 | 1.101635e-159 | -8.615850e-47 |
| Msa0983260 | Msa0983490 | 0.858677 | 6.991225e-63 | -8.615850e-47 |
| Msa0983300 | Msa0983490 | 0.849978 | 2.284346e-60 | -8.615850e-47 |
| Msa0983320 | Msa0983490 | 0.835455 | 1.661293e-56 | -8.615850e-47 |
| Msa0983350 | Msa0983490 | 0.841257 | 5.301107e-58 | -8.615850e-47 |
| Msa0983460 | Msa0983490 | 0.839291 | 1.730533e-57 | -8.615850e-47 |
| Msa0983490 | Msa0983500 | 0.860295 | 2.281802e-63 | -8.615850e-47 |
| Msa0983490 | Msa0983520 | 0.865830 | 4.440899e-65 | -8.615850e-47 |
| Msa0983490 | Msa0983530 | 0.845520 | 3.859229e-59 | -8.615850e-47 |
| Msa0983490 | Msa0983540 | 0.848581 | 5.596584e-60 | -8.615850e-47 |
| Msa0983490 | Msa1224580 | 0.820061 | 8.369975e-53 | -8.615850e-47 |
| Msa0983490 | Msa1228620 | 0.837891 | 3.978048e-57 | -8.615850e-47 |
| Msa0983490 | Msa1270730 | -0.805867 | 1.085145e-49 | -8.615850e-47 |
| Msa0983490 | Msa1391970 | 0.840472 | 8.519708e-58 | -8.615850e-47 |
| Msa0983490 | Msa1392010 | 0.833606 | 4.843091e-56 | -8.615850e-47 |
| Msa0983490 | Msa1392030 | 0.843774 | 1.139214e-58 | -8.615850e-47 |
| Msa0983490 | Msa1392120 | 0.831774 | 1.379855e-55 | -8.615850e-47 |
| Msa0983490 | Msa1392160 | 0.878254 | 3.259923e-69 | -8.615850e-47 |
| Msa0261720 | Msa0983490 | -0.800376 | 1.483436e-48 | -8.615850e-47 |
| Msa0337060 | Msa0983490 | -0.806353 | 8.571671e-50 | -8.615850e-47 |
| Msa0908830 | Msa0983490 | 0.836008 | 1.203349e-56 | -8.615850e-47 |
| Msa0908840 | Msa0983490 | 0.845965 | 2.921175e-59 | -8.615850e-47 |
| Msa0908850 | Msa0983490 | 0.862151 | 6.209282e-64 | -8.615850e-47 |
| Msa0908870 | Msa0983490 | 0.839951 | 1.165452e-57 | -8.615850e-47 |
| Msa0908920 | Msa0983490 | 0.833618 | 4.809525e-56 | -8.615850e-47 |
| Msa0908930 | Msa0983490 | 0.839019 | 2.034475e-57 | -8.615850e-47 |
| Msa0920000 | Msa0983490 | 0.811616 | 6.405255e-51 | -8.615850e-47 |
| Msa0920060 | Msa0983490 | 0.840502 | 8.364608e-58 | -8.615850e-47 |
| Msa0944900 | Msa0983490 | 0.865426 | 5.955054e-65 | -8.615850e-47 |
| Msa0944920 | Msa0983490 | 0.872763 | 2.476942e-67 | -8.615850e-47 |
| Msa0944930 | Msa0983490 | 0.849703 | 2.728289e-60 | -8.615850e-47 |
| Msa0944940 | Msa0983490 | 0.854968 | 8.641250e-62 | -8.615850e-47 |
| Msa0944990 | Msa0983490 | 0.853863 | 1.804056e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983490 | MtrunA17_Chr7g0242571 | 82.500 | 80 | 14 | 0 | 24 | 103 | 42 | 121 | 2.26e-41 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 94 sgRNAs with CRISPR-Local
Find 496 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAGCGTTTACCTATCT+TGG | 0.270615 | 6_4:-26606749 | Msa0983490:CDS |
| CACGGTTCCCTGGCGCTTCA+TGG | 0.280453 | 6_4:+26607119 | None:intergenic |
| GCCTGGAACTGATGAAATTC+GGG | 0.334115 | 6_4:-26605827 | Msa0983490:CDS |
| AGCCTGGAACTGATGAAATT+CGG | 0.342435 | 6_4:-26605828 | Msa0983490:CDS |
| CCCCGAATTTCATCAGTTCC+AGG | 0.347583 | 6_4:+26605826 | None:intergenic |
| CCTTGCAACCTTGCGGTTCC+CGG | 0.349133 | 6_4:+26606481 | None:intergenic |
| ATTCCTCCCGGGCTGGGCTA+AGG | 0.356000 | 6_4:-26607095 | Msa0983490:CDS |
| TGGAGGTTCGCGCATCCTCT+TGG | 0.358564 | 6_4:-26605858 | Msa0983490:CDS |
| ACCTTGCGGTTCCCGGTAAC+CGG | 0.372886 | 6_4:+26606488 | None:intergenic |
| CCTCCAAGGCTTTCTCTGAT+AGG | 0.373914 | 6_4:+26605875 | None:intergenic |
| TGACGAAGGTTCCCGACTTT+CGG | 0.379434 | 6_4:+26606653 | None:intergenic |
| CGGGAACCTTCGTCAGCATT+TGG | 0.380775 | 6_4:-26606645 | Msa0983490:intron |
| TAATCAAAAGGCTTGGTTGC+GGG | 0.396992 | 6_4:-26606546 | Msa0983490:intron |
| CGTTAAGCGTAACGAGTCTA+AGG | 0.398397 | 6_4:+26606711 | None:intergenic |
| CCGACGGTAACGAAGGTTAC+CGG | 0.400498 | 6_4:-26606521 | Msa0983490:CDS |
| TTTATAAAGCTCGGCGAGAA+AGG | 0.401220 | 6_4:-26606013 | Msa0983490:CDS |
| GGTAGAACGAACGGGGAGAG+GGG | 0.420870 | 6_4:-26606917 | Msa0983490:intron |
| TACTTTCTGAGGGGCTCCGC+TGG | 0.424611 | 6_4:-26606079 | Msa0983490:CDS |
| TGCAGTCCCTTAGCCCAGCC+CGG | 0.430164 | 6_4:+26607088 | None:intergenic |
| CGGCCGCCGGTTACTTTCTG+AGG | 0.430313 | 6_4:-26606090 | Msa0983490:CDS |
| GGCCGCCGGTTACTTTCTGA+GGG | 0.439155 | 6_4:-26606089 | Msa0983490:CDS |
| TTCCTCCCGGGCTGGGCTAA+GGG | 0.440088 | 6_4:-26607094 | Msa0983490:CDS |
| TCTTCGCGAATAACATGTGC+AGG | 0.444983 | 6_4:+26606149 | None:intergenic |
| CTCCGCGTCCACCGAAAGTC+GGG | 0.447938 | 6_4:-26606664 | Msa0983490:CDS |
| ACGGTAGAACGAACGGGGAG+AGG | 0.448663 | 6_4:-26606919 | Msa0983490:intron |
| CTCCAAGGCTTTCTCTGATA+GGG | 0.448893 | 6_4:+26605876 | None:intergenic |
| AAGCTTTACTTTATAAAGCT+CGG | 0.449369 | 6_4:-26606022 | Msa0983490:CDS |
| GAAAGCCTACCAACGCATAA+AGG | 0.450871 | 6_4:+26605274 | None:intergenic |
| ATTCGAGCGAGAGCCCAAAC+GGG | 0.455171 | 6_4:+26605302 | None:intergenic |
| GGGAGGAATGCACGGTTCCC+TGG | 0.457829 | 6_4:+26607109 | None:intergenic |
| ACAGAAGCGTTCGCCAAGAT+AGG | 0.457845 | 6_4:+26606736 | None:intergenic |
| TCCAAGGCTTTCTCTGATAG+GGG | 0.460261 | 6_4:+26605877 | None:intergenic |
| TCCTCTTGGAGAGGAAAGCC+TGG | 0.461343 | 6_4:-26605844 | Msa0983490:CDS |
| AGGGAACCGTGCATTCCTCC+CGG | 0.463639 | 6_4:-26607107 | Msa0983490:CDS |
| CGGTAGAACGAACGGGGAGA+GGG | 0.464761 | 6_4:-26606918 | Msa0983490:intron |
| GGAGCCCCTCAGAAAGTAAC+CGG | 0.473005 | 6_4:+26606084 | None:intergenic |
| GTTTGGGCTCTCGCTCGAAT+CGG | 0.485267 | 6_4:-26605299 | Msa0983490:CDS |
| ACATGTTATTCGCGAAGAAA+AGG | 0.486830 | 6_4:-26606144 | Msa0983490:CDS |
| TTATAAAGCTCGGCGAGAAA+GGG | 0.491977 | 6_4:-26606012 | Msa0983490:intron |
| CCTATCAGAGAAAGCCTTGG+AGG | 0.500872 | 6_4:-26605875 | Msa0983490:CDS |
| AGCTTTAAGAGAGAAGAGTA+AGG | 0.502467 | 6_4:+26606040 | None:intergenic |
| TTCCCGGTAACCGGCCGCAT+CGG | 0.503447 | 6_4:+26606497 | None:intergenic |
| CCGGTAACCTTCGTTACCGT+CGG | 0.504322 | 6_4:+26606521 | None:intergenic |
| ACGGTTCCCTGGCGCTTCAT+GGG | 0.505530 | 6_4:+26607120 | None:intergenic |
| CCAACGAGTCTTTAAGTAAG+TGG | 0.506874 | 6_4:+26606687 | None:intergenic |
| GATTCGAGCGAGAGCCCAAA+CGG | 0.520562 | 6_4:+26605301 | None:intergenic |
| CGGAACCTTTATGCGTTGGT+AGG | 0.522894 | 6_4:-26605279 | None:intergenic |
| TTGTTGTAGTCGGTCCGTGA+AGG | 0.526711 | 6_4:+26606821 | None:intergenic |
| CTCAGAAAGTAACCGGCGGC+CGG | 0.526881 | 6_4:+26606091 | None:intergenic |
| GCTTTAAGAGAGAAGAGTAA+GGG | 0.526972 | 6_4:+26606041 | None:intergenic |
| AGCAGCAAGTTATCCCTTCA+CGG | 0.531510 | 6_4:-26606835 | Msa0983490:CDS |
| CCCAGCCCGGGAGGAATGCA+CGG | 0.539184 | 6_4:+26607101 | None:intergenic |
| CGAAGGTTCCCGACTTTCGG+TGG | 0.539424 | 6_4:+26606656 | None:intergenic |
| AGTCGCGAGCTTGTTGTAGT+CGG | 0.542308 | 6_4:+26606811 | None:intergenic |
| ATAATCAAAAGGCTTGGTTG+CGG | 0.545201 | 6_4:-26606547 | Msa0983490:intron |
| GGGAACCGTGCATTCCTCCC+GGG | 0.546528 | 6_4:-26607106 | Msa0983490:CDS |
| AACGAGCCGTGCAAGAACGC+GGG | 0.549307 | 6_4:-26606871 | Msa0983490:CDS |
| GGCTTGGTTGCGGGAACCGA+CGG | 0.551206 | 6_4:-26606537 | Msa0983490:CDS |
| CCGGGAACCTTGCAACCTTG+CGG | 0.551230 | 6_4:+26606474 | None:intergenic |
| TATATCCCCGCGTTCTTGCA+CGG | 0.553405 | 6_4:+26606865 | None:intergenic |
| CCGGGAACCGCAAGGTTGCA+AGG | 0.555882 | 6_4:-26606481 | Msa0983490:intron |
| GAACGAGCCGTGCAAGAACG+CGG | 0.559799 | 6_4:-26606872 | Msa0983490:CDS |
| GAATCGGAACCTTTATGCGT+TGG | 0.561143 | 6_4:-26605283 | Msa0983490:CDS |
| TGTTGTAGTCGGTCCGTGAA+GGG | 0.568096 | 6_4:+26606822 | None:intergenic |
| CCACTTACTTAAAGACTCGT+TGG | 0.572234 | 6_4:-26606687 | Msa0983490:CDS |
| GTAGAACGAACGGGGAGAGG+GGG | 0.575494 | 6_4:-26606916 | Msa0983490:intron |
| CTTTAAGAGAGAAGAGTAAG+GGG | 0.578439 | 6_4:+26606042 | None:intergenic |
| GAATGAAGATGGATGAGCAG+AGG | 0.582226 | 6_4:-26605923 | Msa0983490:intron |
| TTAGTAGAGCTACCGGCCGC+CGG | 0.583319 | 6_4:-26606103 | Msa0983490:CDS |
| TTTCTCATTATTCAGAACTG+TGG | 0.584900 | 6_4:-26605353 | Msa0983490:intron |
| GTCCCTTAGCCCAGCCCGGG+AGG | 0.586581 | 6_4:+26607092 | None:intergenic |
| GCCCGTCCCATGAAGCGCCA+GGG | 0.588949 | 6_4:-26607126 | None:intergenic |
| CCAAGGCTTTCTCTGATAGG+GGG | 0.589082 | 6_4:+26605878 | None:intergenic |
| AGAGGATGCGCGAACCTCCA+AGG | 0.589918 | 6_4:+26605861 | None:intergenic |
| CGAAGGTTACCGGGCCGATG+CGG | 0.590637 | 6_4:-26606511 | Msa0983490:CDS |
| CAACGAGTCTTTAAGTAAGT+GGG | 0.595300 | 6_4:+26606688 | None:intergenic |
| GCTGACGACTACAGGGGAAG+CGG | 0.611268 | 6_4:+26607060 | None:intergenic |
| CTTCGCGAATAACATGTGCA+GGG | 0.617360 | 6_4:+26606150 | None:intergenic |
| TTCGAGCGAGAGCCCAAACG+GGG | 0.618826 | 6_4:+26605303 | None:intergenic |
| CGCGAAGAAAAGGCAGCGAG+CGG | 0.637879 | 6_4:-26606134 | Msa0983490:CDS |
| TCCAGGCTTTCCTCTCCAAG+AGG | 0.640384 | 6_4:+26605843 | None:intergenic |
| ACGAGCCGTGCAAGAACGCG+GGG | 0.647153 | 6_4:-26606870 | Msa0983490:CDS |
| CCTGGAACTGATGAAATTCG+GGG | 0.659244 | 6_4:-26605826 | Msa0983490:CDS |
| TCTTCGCTTAGTAGAGCTAC+CGG | 0.659447 | 6_4:-26606110 | Msa0983490:CDS |
| CTGGAACTGATGAAATTCGG+GGG | 0.672950 | 6_4:-26605825 | Msa0983490:CDS |
| GCGGGAACCGACGGTAACGA+AGG | 0.675005 | 6_4:-26606528 | Msa0983490:CDS |
| TCGAGCGAGAGCCCAAACGG+GGG | 0.687689 | 6_4:+26605304 | None:intergenic |
| GCCCCTCAGAAAGTAACCGG+CGG | 0.691314 | 6_4:+26606087 | None:intergenic |
| GTTCGCGCATCCTCTTGGAG+AGG | 0.693737 | 6_4:-26605853 | Msa0983490:CDS |
| TTTGGACGGTAGAACGAACG+GGG | 0.694126 | 6_4:-26606924 | Msa0983490:intron |
| AGAGTACCAAATGCTGACGA+AGG | 0.701092 | 6_4:+26606639 | None:intergenic |
| GCCGCCGGTTACTTTCTGAG+GGG | 0.709280 | 6_4:-26606088 | Msa0983490:CDS |
| TTTAAGAGAGAAGAGTAAGG+GGG | 0.711938 | 6_4:+26606043 | None:intergenic |
| GCGACTCTAATAGAAACAGA+CGG | 0.725871 | 6_4:-26606794 | Msa0983490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTCTAATTAGTTATCAAA+AGG | + | chr6_4:26605980-26605999 | None:intergenic | 20.0% |
| !! | AACTCTAATTAGTTATCAAA+AGG | + | chr6_4:26605980-26605999 | None:intergenic | 20.0% |
| ! | ATTATGTCTTTCTTTCTGAA+GGG | + | chr6_4:26605835-26605854 | None:intergenic | 25.0% |
| ! | GAAAGAAAGACATAATCAAA+AGG | - | chr6_4:26605839-26605858 | Msa0983490:CDS | 25.0% |
| ! | TAATTAGAGTTGACATGAAA+TGG | - | chr6_4:26605989-26606008 | Msa0983490:intron | 25.0% |
| ! | AAGCTTTACTTTATAAAGCT+CGG | - | chr6_4:26606375-26606394 | Msa0983490:intron | 25.0% |
| !! | TTTTTCATTTGCCAATGAAT+TGG | - | chr6_4:26606882-26606901 | Msa0983490:CDS | 25.0% |
| ! | ATTATGTCTTTCTTTCTGAA+GGG | + | chr6_4:26605835-26605854 | None:intergenic | 25.0% |
| ! | GAAAGAAAGACATAATCAAA+AGG | - | chr6_4:26605839-26605858 | Msa0983490:CDS | 25.0% |
| ! | TAATTAGAGTTGACATGAAA+TGG | - | chr6_4:26605989-26606008 | Msa0983490:intron | 25.0% |
| ! | AAGCTTTACTTTATAAAGCT+CGG | - | chr6_4:26606375-26606394 | Msa0983490:intron | 25.0% |
| !! | TTTTTCATTTGCCAATGAAT+TGG | - | chr6_4:26606882-26606901 | Msa0983490:CDS | 25.0% |
| ! | TGTTCATAATCTGGAGTAAA+AGG | - | chr6_4:26605384-26605403 | Msa0983490:intron | 30.0% |
| GATTATGTCTTTCTTTCTGA+AGG | + | chr6_4:26605836-26605855 | None:intergenic | 30.0% | |
| AAAGACATAATCAAAAGGCT+TGG | - | chr6_4:26605844-26605863 | Msa0983490:CDS | 30.0% | |
| TACCTTCCATCTATATCTAT+AGG | + | chr6_4:26606201-26606220 | None:intergenic | 30.0% | |
| TCAATTGAAATGTTTGCCTT+TGG | - | chr6_4:26606452-26606471 | Msa0983490:intron | 30.0% | |
| AATCCCATTATTGATCGAAT+CGG | + | chr6_4:26606910-26606929 | None:intergenic | 30.0% | |
| AATCTTATCATCTGTTAGGT+AGG | + | chr6_4:26606993-26607012 | None:intergenic | 30.0% | |
| TTTCTCATTATTCAGAACTG+TGG | - | chr6_4:26607044-26607063 | Msa0983490:intron | 30.0% | |
| ! | TGTTCATAATCTGGAGTAAA+AGG | - | chr6_4:26605384-26605403 | Msa0983490:intron | 30.0% |
| GATTATGTCTTTCTTTCTGA+AGG | + | chr6_4:26605836-26605855 | None:intergenic | 30.0% | |
| AAAGACATAATCAAAAGGCT+TGG | - | chr6_4:26605844-26605863 | Msa0983490:CDS | 30.0% | |
| TACCTTCCATCTATATCTAT+AGG | + | chr6_4:26606201-26606220 | None:intergenic | 30.0% | |
| TCAATTGAAATGTTTGCCTT+TGG | - | chr6_4:26606452-26606471 | Msa0983490:intron | 30.0% | |
| AATCCCATTATTGATCGAAT+CGG | + | chr6_4:26606910-26606929 | None:intergenic | 30.0% | |
| AATCTTATCATCTGTTAGGT+AGG | + | chr6_4:26606993-26607012 | None:intergenic | 30.0% | |
| TTTCTCATTATTCAGAACTG+TGG | - | chr6_4:26607044-26607063 | Msa0983490:intron | 30.0% | |
| CAACGAGTCTTTAAGTAAGT+GGG | + | chr6_4:26605712-26605731 | None:intergenic | 35.0% | |
| AATAGTTCACTGAAAGCCTT+TGG | - | chr6_4:26605793-26605812 | Msa0983490:intron | 35.0% | |
| ! | ATAATCAAAAGGCTTGGTTG+CGG | - | chr6_4:26605850-26605869 | Msa0983490:CDS | 35.0% |
| CTACTTTACAAACAAAGGGA+AGG | + | chr6_4:26605956-26605975 | None:intergenic | 35.0% | |
| ! | CTTCCCTTTGTTTGTAAAGT+AGG | - | chr6_4:26605954-26605973 | Msa0983490:intron | 35.0% |
| AGGCCTACTTTACAAACAAA+GGG | + | chr6_4:26605960-26605979 | None:intergenic | 35.0% | |
| AAGGCCTACTTTACAAACAA+AGG | + | chr6_4:26605961-26605980 | None:intergenic | 35.0% | |
| AGTTGACATGAAATGGATCA+CGG | - | chr6_4:26605996-26606015 | Msa0983490:intron | 35.0% | |
| CTTCCATCTATATCTATAGG+CGG | + | chr6_4:26606198-26606217 | None:intergenic | 35.0% | |
| ACATGTTATTCGCGAAGAAA+AGG | - | chr6_4:26606253-26606272 | Msa0983490:intron | 35.0% | |
| TTTAAGAGAGAAGAGTAAGG+GGG | + | chr6_4:26606357-26606376 | None:intergenic | 35.0% | |
| ! | CTTTAAGAGAGAAGAGTAAG+GGG | + | chr6_4:26606358-26606377 | None:intergenic | 35.0% |
| !! | GCTTTAAGAGAGAAGAGTAA+GGG | + | chr6_4:26606359-26606378 | None:intergenic | 35.0% |
| !! | AGCTTTAAGAGAGAAGAGTA+AGG | + | chr6_4:26606360-26606379 | None:intergenic | 35.0% |
| AGTACCGTTGAAAAGACTAA+AGG | - | chr6_4:26606654-26606673 | Msa0983490:CDS | 35.0% | |
| !! | CGTTCCTTTAGTCTTTTCAA+CGG | + | chr6_4:26606661-26606680 | None:intergenic | 35.0% |
| CGTTGAAAAGACTAAAGGAA+CGG | - | chr6_4:26606659-26606678 | Msa0983490:CDS | 35.0% | |
| GTTGAAAAGACTAAAGGAAC+GGG | - | chr6_4:26606660-26606679 | Msa0983490:CDS | 35.0% | |
| TTGAAAAGACTAAAGGAACG+GGG | - | chr6_4:26606661-26606680 | Msa0983490:CDS | 35.0% | |
| TACTACCTGTAATAAAGCAC+AGG | - | chr6_4:26606689-26606708 | Msa0983490:CDS | 35.0% | |
| ! | ATTAGCCTGTGCTTTATTAC+AGG | + | chr6_4:26606697-26606716 | None:intergenic | 35.0% |
| !! | CTCTTCTTCTTTTCTAGTCT+AGG | - | chr6_4:26606832-26606851 | Msa0983490:CDS | 35.0% |
| ATCCCATTATTGATCGAATC+GGG | + | chr6_4:26606909-26606928 | None:intergenic | 35.0% | |
| ! | TCGATCAATAATGGGATTCT+TGG | - | chr6_4:26606912-26606931 | Msa0983490:CDS | 35.0% |
| CGAGAATCTTATCATCTGTT+AGG | + | chr6_4:26606997-26607016 | None:intergenic | 35.0% | |
| CAACGAGTCTTTAAGTAAGT+GGG | + | chr6_4:26605712-26605731 | None:intergenic | 35.0% | |
| AATAGTTCACTGAAAGCCTT+TGG | - | chr6_4:26605793-26605812 | Msa0983490:intron | 35.0% | |
| ! | ATAATCAAAAGGCTTGGTTG+CGG | - | chr6_4:26605850-26605869 | Msa0983490:CDS | 35.0% |
| CTACTTTACAAACAAAGGGA+AGG | + | chr6_4:26605956-26605975 | None:intergenic | 35.0% | |
| ! | CTTCCCTTTGTTTGTAAAGT+AGG | - | chr6_4:26605954-26605973 | Msa0983490:intron | 35.0% |
| AGGCCTACTTTACAAACAAA+GGG | + | chr6_4:26605960-26605979 | None:intergenic | 35.0% | |
| AAGGCCTACTTTACAAACAA+AGG | + | chr6_4:26605961-26605980 | None:intergenic | 35.0% | |
| AGTTGACATGAAATGGATCA+CGG | - | chr6_4:26605996-26606015 | Msa0983490:intron | 35.0% | |
| CTTCCATCTATATCTATAGG+CGG | + | chr6_4:26606198-26606217 | None:intergenic | 35.0% | |
| ACATGTTATTCGCGAAGAAA+AGG | - | chr6_4:26606253-26606272 | Msa0983490:intron | 35.0% | |
| TTTAAGAGAGAAGAGTAAGG+GGG | + | chr6_4:26606357-26606376 | None:intergenic | 35.0% | |
| ! | CTTTAAGAGAGAAGAGTAAG+GGG | + | chr6_4:26606358-26606377 | None:intergenic | 35.0% |
| !! | GCTTTAAGAGAGAAGAGTAA+GGG | + | chr6_4:26606359-26606378 | None:intergenic | 35.0% |
| !! | AGCTTTAAGAGAGAAGAGTA+AGG | + | chr6_4:26606360-26606379 | None:intergenic | 35.0% |
| AGTACCGTTGAAAAGACTAA+AGG | - | chr6_4:26606654-26606673 | Msa0983490:CDS | 35.0% | |
| !! | CGTTCCTTTAGTCTTTTCAA+CGG | + | chr6_4:26606661-26606680 | None:intergenic | 35.0% |
| CGTTGAAAAGACTAAAGGAA+CGG | - | chr6_4:26606659-26606678 | Msa0983490:CDS | 35.0% | |
| GTTGAAAAGACTAAAGGAAC+GGG | - | chr6_4:26606660-26606679 | Msa0983490:CDS | 35.0% | |
| TTGAAAAGACTAAAGGAACG+GGG | - | chr6_4:26606661-26606680 | Msa0983490:CDS | 35.0% | |
| TACTACCTGTAATAAAGCAC+AGG | - | chr6_4:26606689-26606708 | Msa0983490:CDS | 35.0% | |
| ! | ATTAGCCTGTGCTTTATTAC+AGG | + | chr6_4:26606697-26606716 | None:intergenic | 35.0% |
| !! | CTCTTCTTCTTTTCTAGTCT+AGG | - | chr6_4:26606832-26606851 | Msa0983490:CDS | 35.0% |
| ATCCCATTATTGATCGAATC+GGG | + | chr6_4:26606909-26606928 | None:intergenic | 35.0% | |
| ! | TCGATCAATAATGGGATTCT+TGG | - | chr6_4:26606912-26606931 | Msa0983490:CDS | 35.0% |
| CGAGAATCTTATCATCTGTT+AGG | + | chr6_4:26606997-26607016 | None:intergenic | 35.0% | |
| GCGACTCTAATAGAAACAGA+CGG | - | chr6_4:26605603-26605622 | Msa0983490:intron | 40.0% | |
| ! | TGCAAAGCGTTTACCTATCT+TGG | - | chr6_4:26605648-26605667 | Msa0983490:intron | 40.0% |
| CCAACGAGTCTTTAAGTAAG+TGG | + | chr6_4:26605713-26605732 | None:intergenic | 40.0% | |
| CCACTTACTTAAAGACTCGT+TGG | - | chr6_4:26605710-26605729 | Msa0983490:intron | 40.0% | |
| ! | TAATCAAAAGGCTTGGTTGC+GGG | - | chr6_4:26605851-26605870 | Msa0983490:CDS | 40.0% |
| TCTATATCTATAGGCGGCAA+TGG | + | chr6_4:26606192-26606211 | None:intergenic | 40.0% | |
| TTGCCGCCTATAGATATAGA+TGG | - | chr6_4:26606192-26606211 | Msa0983490:intron | 40.0% | |
| CGCCTATAGATATAGATGGA+AGG | - | chr6_4:26606196-26606215 | Msa0983490:intron | 40.0% | |
| TTTATAAAGCTCGGCGAGAA+AGG | - | chr6_4:26606384-26606403 | Msa0983490:intron | 40.0% | |
| TTATAAAGCTCGGCGAGAAA+GGG | - | chr6_4:26606385-26606404 | Msa0983490:intron | 40.0% | |
| TTGAGTGACTGTAACTGCTA+TGG | + | chr6_4:26606436-26606455 | None:intergenic | 40.0% | |
| !! | GTTTGCCTTTGGAATGAAGA+TGG | - | chr6_4:26606463-26606482 | Msa0983490:intron | 40.0% |
| CTCATCCATCTTCATTCCAA+AGG | + | chr6_4:26606471-26606490 | None:intergenic | 40.0% | |
| AGCCTGGAACTGATGAAATT+CGG | - | chr6_4:26606569-26606588 | Msa0983490:intron | 40.0% | |
| ATGGAATCGGTCACTATACT+GGG | - | chr6_4:26606599-26606618 | Msa0983490:intron | 40.0% | |
| GGTACTTGAATCTTAAGTCG+CGG | + | chr6_4:26606640-26606659 | None:intergenic | 40.0% | |
| TGAAAAGACTAAAGGAACGG+GGG | - | chr6_4:26606662-26606681 | Msa0983490:CDS | 40.0% | |
| GAGTAACTAAGACAAGAGCT+AGG | + | chr6_4:26606815-26606834 | None:intergenic | 40.0% | |
| TCCCATTATTGATCGAATCG+GGG | + | chr6_4:26606908-26606927 | None:intergenic | 40.0% | |
| AGAAGAAAGGTTCTGTGACA+TGG | - | chr6_4:26606937-26606956 | Msa0983490:intron | 40.0% | |
| GCGACTCTAATAGAAACAGA+CGG | - | chr6_4:26605603-26605622 | Msa0983490:intron | 40.0% | |
| ! | TGCAAAGCGTTTACCTATCT+TGG | - | chr6_4:26605648-26605667 | Msa0983490:intron | 40.0% |
| CCAACGAGTCTTTAAGTAAG+TGG | + | chr6_4:26605713-26605732 | None:intergenic | 40.0% | |
| CCACTTACTTAAAGACTCGT+TGG | - | chr6_4:26605710-26605729 | Msa0983490:intron | 40.0% | |
| ! | TAATCAAAAGGCTTGGTTGC+GGG | - | chr6_4:26605851-26605870 | Msa0983490:CDS | 40.0% |
| TCTATATCTATAGGCGGCAA+TGG | + | chr6_4:26606192-26606211 | None:intergenic | 40.0% | |
| TTGCCGCCTATAGATATAGA+TGG | - | chr6_4:26606192-26606211 | Msa0983490:intron | 40.0% | |
| CGCCTATAGATATAGATGGA+AGG | - | chr6_4:26606196-26606215 | Msa0983490:intron | 40.0% | |
| TTTATAAAGCTCGGCGAGAA+AGG | - | chr6_4:26606384-26606403 | Msa0983490:intron | 40.0% | |
| TTATAAAGCTCGGCGAGAAA+GGG | - | chr6_4:26606385-26606404 | Msa0983490:intron | 40.0% | |
| TTGAGTGACTGTAACTGCTA+TGG | + | chr6_4:26606436-26606455 | None:intergenic | 40.0% | |
| !! | GTTTGCCTTTGGAATGAAGA+TGG | - | chr6_4:26606463-26606482 | Msa0983490:intron | 40.0% |
| CTCATCCATCTTCATTCCAA+AGG | + | chr6_4:26606471-26606490 | None:intergenic | 40.0% | |
| AGCCTGGAACTGATGAAATT+CGG | - | chr6_4:26606569-26606588 | Msa0983490:intron | 40.0% | |
| ATGGAATCGGTCACTATACT+GGG | - | chr6_4:26606599-26606618 | Msa0983490:intron | 40.0% | |
| GGTACTTGAATCTTAAGTCG+CGG | + | chr6_4:26606640-26606659 | None:intergenic | 40.0% | |
| TGAAAAGACTAAAGGAACGG+GGG | - | chr6_4:26606662-26606681 | Msa0983490:CDS | 40.0% | |
| GAGTAACTAAGACAAGAGCT+AGG | + | chr6_4:26606815-26606834 | None:intergenic | 40.0% | |
| TCCCATTATTGATCGAATCG+GGG | + | chr6_4:26606908-26606927 | None:intergenic | 40.0% | |
| AGAAGAAAGGTTCTGTGACA+TGG | - | chr6_4:26606937-26606956 | Msa0983490:intron | 40.0% | |
| TCGTTCTTGACAGATCCGAT+CGG | - | chr6_4:26605360-26605379 | Msa0983490:intron | 45.0% | |
| CCAGATTATGAACACCCGAT+CGG | + | chr6_4:26605378-26605397 | None:intergenic | 45.0% | |
| !!! | TTTTTGGTACCGGCATGCAA+AGG | + | chr6_4:26605417-26605436 | None:intergenic | 45.0% |
| TGGAGTATAGCCAAGTGGTA+AGG | + | chr6_4:26605446-26605465 | None:intergenic | 45.0% | |
| CCACTTGGCTATACTCCATA+CGG | - | chr6_4:26605448-26605467 | Msa0983490:intron | 45.0% | |
| ! | GCTATACTCCATACGGCTTT+TGG | - | chr6_4:26605455-26605474 | Msa0983490:intron | 45.0% |
| ! | TACTCCATACGGCTTTTGGA+CGG | - | chr6_4:26605459-26605478 | Msa0983490:intron | 45.0% |
| ! | CTTTTGGACGGTAGAACGAA+CGG | - | chr6_4:26605471-26605490 | Msa0983490:intron | 45.0% |
| ! | TTTTGGACGGTAGAACGAAC+GGG | - | chr6_4:26605472-26605491 | Msa0983490:intron | 45.0% |
| AGCAGCAAGTTATCCCTTCA+CGG | - | chr6_4:26605562-26605581 | Msa0983490:intron | 45.0% | |
| CGTTAAGCGTAACGAGTCTA+AGG | + | chr6_4:26605689-26605708 | None:intergenic | 45.0% | |
| ! | AGAGTACCAAATGCTGACGA+AGG | + | chr6_4:26605761-26605780 | None:intergenic | 45.0% |
| CTTGCGGTTCATTACACCAA+AGG | + | chr6_4:26605812-26605831 | None:intergenic | 45.0% | |
| ! | CTTTCTTTCTGAAGGGCTTG+CGG | + | chr6_4:26605828-26605847 | None:intergenic | 45.0% |
| TTCCATAGAAGAACCCGTGT+GGG | + | chr6_4:26606064-26606083 | None:intergenic | 45.0% | |
| ACACGGGTTCTTCTATGGAA+GGG | - | chr6_4:26606064-26606083 | Msa0983490:CDS | 45.0% | |
| GGTTCCCCTTATTCTATGTG+AGG | - | chr6_4:26606086-26606105 | Msa0983490:CDS | 45.0% | |
| TCCCCTTATTCTATGTGAGG+TGG | - | chr6_4:26606089-26606108 | Msa0983490:CDS | 45.0% | |
| CCCACCTCACATAGAATAAG+GGG | + | chr6_4:26606093-26606112 | None:intergenic | 45.0% | |
| CCCCTTATTCTATGTGAGGT+GGG | - | chr6_4:26606090-26606109 | Msa0983490:CDS | 45.0% | |
| CCCCACCTCACATAGAATAA+GGG | + | chr6_4:26606094-26606113 | None:intergenic | 45.0% | |
| CCCTTATTCTATGTGAGGTG+GGG | - | chr6_4:26606091-26606110 | Msa0983490:CDS | 45.0% | |
| GGTAAGCATGGTCACTGTAT+CGG | + | chr6_4:26606161-26606180 | None:intergenic | 45.0% | |
| !! | TAGCTTGCTTCTCTTCTCCT+AGG | - | chr6_4:26606219-26606238 | Msa0983490:intron | 45.0% |
| CTTCGCGAATAACATGTGCA+GGG | + | chr6_4:26606250-26606269 | None:intergenic | 45.0% | |
| TCTTCGCGAATAACATGTGC+AGG | + | chr6_4:26606251-26606270 | None:intergenic | 45.0% | |
| TCTTCGCTTAGTAGAGCTAC+CGG | - | chr6_4:26606287-26606306 | Msa0983490:intron | 45.0% | |
| GAATGAAGATGGATGAGCAG+AGG | - | chr6_4:26606474-26606493 | Msa0983490:intron | 45.0% | |
| TCCAAGGCTTTCTCTGATAG+GGG | + | chr6_4:26606523-26606542 | None:intergenic | 45.0% | |
| CTCCAAGGCTTTCTCTGATA+GGG | + | chr6_4:26606524-26606543 | None:intergenic | 45.0% | |
| GCCTGGAACTGATGAAATTC+GGG | - | chr6_4:26606570-26606589 | Msa0983490:intron | 45.0% | |
| CCTGGAACTGATGAAATTCG+GGG | - | chr6_4:26606571-26606590 | Msa0983490:intron | 45.0% | |
| CTGGAACTGATGAAATTCGG+GGG | - | chr6_4:26606572-26606591 | Msa0983490:intron | 45.0% | |
| GATGAAATTCGGGGGAAACA+TGG | - | chr6_4:26606580-26606599 | Msa0983490:intron | 45.0% | |
| ATTCGGGGGAAACATGGAAT+CGG | - | chr6_4:26606586-26606605 | Msa0983490:intron | 45.0% | |
| CATGGAATCGGTCACTATAC+TGG | - | chr6_4:26606598-26606617 | Msa0983490:intron | 45.0% | |
| TGGAATCGGTCACTATACTG+GGG | - | chr6_4:26606600-26606619 | Msa0983490:intron | 45.0% | |
| GAAAAGACTAAAGGAACGGG+GGG | - | chr6_4:26606663-26606682 | Msa0983490:CDS | 45.0% | |
| GGATCTGGTAATCTTCTGGT+CGG | + | chr6_4:26606725-26606744 | None:intergenic | 45.0% | |
| ACCAGAAGATTACCAGATCC+TGG | - | chr6_4:26606725-26606744 | Msa0983490:CDS | 45.0% | |
| TCCAGGATCTGGTAATCTTC+TGG | + | chr6_4:26606729-26606748 | None:intergenic | 45.0% | |
| ! | TCTCTAGGAAGATTGTGTCC+AGG | + | chr6_4:26606746-26606765 | None:intergenic | 45.0% |
| GGACACAATCTTCCTAGAGA+TGG | - | chr6_4:26606746-26606765 | Msa0983490:CDS | 45.0% | |
| CAAGATGGAGAGGCTAGAAA+AGG | + | chr6_4:26606788-26606807 | None:intergenic | 45.0% | |
| CAAGAGCTAGGTAAGCAAGA+TGG | + | chr6_4:26606803-26606822 | None:intergenic | 45.0% | |
| ! | GCCCCGATTCGATCAATAAT+GGG | - | chr6_4:26606904-26606923 | Msa0983490:CDS | 45.0% |
| GGGATTCTTGGCTAGAAGAA+AGG | - | chr6_4:26606924-26606943 | Msa0983490:intron | 45.0% | |
| GAATCGGAACCTTTATGCGT+TGG | - | chr6_4:26607114-26607133 | Msa0983490:CDS | 45.0% | |
| TCGTTCTTGACAGATCCGAT+CGG | - | chr6_4:26605360-26605379 | Msa0983490:intron | 45.0% | |
| CCAGATTATGAACACCCGAT+CGG | + | chr6_4:26605378-26605397 | None:intergenic | 45.0% | |
| !!! | TTTTTGGTACCGGCATGCAA+AGG | + | chr6_4:26605417-26605436 | None:intergenic | 45.0% |
| TGGAGTATAGCCAAGTGGTA+AGG | + | chr6_4:26605446-26605465 | None:intergenic | 45.0% | |
| CCACTTGGCTATACTCCATA+CGG | - | chr6_4:26605448-26605467 | Msa0983490:intron | 45.0% | |
| ! | GCTATACTCCATACGGCTTT+TGG | - | chr6_4:26605455-26605474 | Msa0983490:intron | 45.0% |
| ! | TACTCCATACGGCTTTTGGA+CGG | - | chr6_4:26605459-26605478 | Msa0983490:intron | 45.0% |
| ! | CTTTTGGACGGTAGAACGAA+CGG | - | chr6_4:26605471-26605490 | Msa0983490:intron | 45.0% |
| ! | TTTTGGACGGTAGAACGAAC+GGG | - | chr6_4:26605472-26605491 | Msa0983490:intron | 45.0% |
| AGCAGCAAGTTATCCCTTCA+CGG | - | chr6_4:26605562-26605581 | Msa0983490:intron | 45.0% | |
| CGTTAAGCGTAACGAGTCTA+AGG | + | chr6_4:26605689-26605708 | None:intergenic | 45.0% | |
| ! | AGAGTACCAAATGCTGACGA+AGG | + | chr6_4:26605761-26605780 | None:intergenic | 45.0% |
| CTTGCGGTTCATTACACCAA+AGG | + | chr6_4:26605812-26605831 | None:intergenic | 45.0% | |
| ! | CTTTCTTTCTGAAGGGCTTG+CGG | + | chr6_4:26605828-26605847 | None:intergenic | 45.0% |
| TTCCATAGAAGAACCCGTGT+GGG | + | chr6_4:26606064-26606083 | None:intergenic | 45.0% | |
| ACACGGGTTCTTCTATGGAA+GGG | - | chr6_4:26606064-26606083 | Msa0983490:CDS | 45.0% | |
| GGTTCCCCTTATTCTATGTG+AGG | - | chr6_4:26606086-26606105 | Msa0983490:CDS | 45.0% | |
| TCCCCTTATTCTATGTGAGG+TGG | - | chr6_4:26606089-26606108 | Msa0983490:CDS | 45.0% | |
| CCCACCTCACATAGAATAAG+GGG | + | chr6_4:26606093-26606112 | None:intergenic | 45.0% | |
| CCCCTTATTCTATGTGAGGT+GGG | - | chr6_4:26606090-26606109 | Msa0983490:CDS | 45.0% | |
| CCCCACCTCACATAGAATAA+GGG | + | chr6_4:26606094-26606113 | None:intergenic | 45.0% | |
| CCCTTATTCTATGTGAGGTG+GGG | - | chr6_4:26606091-26606110 | Msa0983490:CDS | 45.0% | |
| GGTAAGCATGGTCACTGTAT+CGG | + | chr6_4:26606161-26606180 | None:intergenic | 45.0% | |
| !! | TAGCTTGCTTCTCTTCTCCT+AGG | - | chr6_4:26606219-26606238 | Msa0983490:intron | 45.0% |
| CTTCGCGAATAACATGTGCA+GGG | + | chr6_4:26606250-26606269 | None:intergenic | 45.0% | |
| TCTTCGCGAATAACATGTGC+AGG | + | chr6_4:26606251-26606270 | None:intergenic | 45.0% | |
| TCTTCGCTTAGTAGAGCTAC+CGG | - | chr6_4:26606287-26606306 | Msa0983490:intron | 45.0% | |
| GAATGAAGATGGATGAGCAG+AGG | - | chr6_4:26606474-26606493 | Msa0983490:intron | 45.0% | |
| TCCAAGGCTTTCTCTGATAG+GGG | + | chr6_4:26606523-26606542 | None:intergenic | 45.0% | |
| CTCCAAGGCTTTCTCTGATA+GGG | + | chr6_4:26606524-26606543 | None:intergenic | 45.0% | |
| GCCTGGAACTGATGAAATTC+GGG | - | chr6_4:26606570-26606589 | Msa0983490:intron | 45.0% | |
| CCTGGAACTGATGAAATTCG+GGG | - | chr6_4:26606571-26606590 | Msa0983490:intron | 45.0% | |
| CTGGAACTGATGAAATTCGG+GGG | - | chr6_4:26606572-26606591 | Msa0983490:intron | 45.0% | |
| GATGAAATTCGGGGGAAACA+TGG | - | chr6_4:26606580-26606599 | Msa0983490:intron | 45.0% | |
| ATTCGGGGGAAACATGGAAT+CGG | - | chr6_4:26606586-26606605 | Msa0983490:intron | 45.0% | |
| CATGGAATCGGTCACTATAC+TGG | - | chr6_4:26606598-26606617 | Msa0983490:intron | 45.0% | |
| TGGAATCGGTCACTATACTG+GGG | - | chr6_4:26606600-26606619 | Msa0983490:intron | 45.0% | |
| GAAAAGACTAAAGGAACGGG+GGG | - | chr6_4:26606663-26606682 | Msa0983490:CDS | 45.0% | |
| GGATCTGGTAATCTTCTGGT+CGG | + | chr6_4:26606725-26606744 | None:intergenic | 45.0% | |
| ACCAGAAGATTACCAGATCC+TGG | - | chr6_4:26606725-26606744 | Msa0983490:CDS | 45.0% | |
| TCCAGGATCTGGTAATCTTC+TGG | + | chr6_4:26606729-26606748 | None:intergenic | 45.0% | |
| ! | TCTCTAGGAAGATTGTGTCC+AGG | + | chr6_4:26606746-26606765 | None:intergenic | 45.0% |
| GGACACAATCTTCCTAGAGA+TGG | - | chr6_4:26606746-26606765 | Msa0983490:CDS | 45.0% | |
| CAAGATGGAGAGGCTAGAAA+AGG | + | chr6_4:26606788-26606807 | None:intergenic | 45.0% | |
| CAAGAGCTAGGTAAGCAAGA+TGG | + | chr6_4:26606803-26606822 | None:intergenic | 45.0% | |
| ! | GCCCCGATTCGATCAATAAT+GGG | - | chr6_4:26606904-26606923 | Msa0983490:CDS | 45.0% |
| GGGATTCTTGGCTAGAAGAA+AGG | - | chr6_4:26606924-26606943 | Msa0983490:intron | 45.0% | |
| GAATCGGAACCTTTATGCGT+TGG | - | chr6_4:26607114-26607133 | Msa0983490:CDS | 45.0% | |
| AGAACGAGCTGACGACTACA+GGG | + | chr6_4:26605347-26605366 | None:intergenic | 50.0% | |
| AAGAACGAGCTGACGACTAC+AGG | + | chr6_4:26605348-26605367 | None:intergenic | 50.0% | |
| CGTTCTTGACAGATCCGATC+GGG | - | chr6_4:26605361-26605380 | Msa0983490:intron | 50.0% | |
| CCGATCGGGTGTTCATAATC+TGG | - | chr6_4:26605375-26605394 | Msa0983490:intron | 50.0% | |
| GGATTCGAACCTTTGCATGC+CGG | - | chr6_4:26605405-26605424 | Msa0983490:intron | 50.0% | |
| TGCATGCCGGTACCAAAAAC+CGG | - | chr6_4:26605418-26605437 | Msa0983490:intron | 50.0% | |
| !!! | AAGGCACCGGTTTTTGGTAC+CGG | + | chr6_4:26605427-26605446 | None:intergenic | 50.0% |
| !!! | AGTGGTAAGGCACCGGTTTT+TGG | + | chr6_4:26605433-26605452 | None:intergenic | 50.0% |
| AAAACCGGTGCCTTACCACT+TGG | - | chr6_4:26605433-26605452 | Msa0983490:intron | 50.0% | |
| ATAGCCAAGTGGTAAGGCAC+CGG | + | chr6_4:26605440-26605459 | None:intergenic | 50.0% | |
| CCGTATGGAGTATAGCCAAG+TGG | + | chr6_4:26605451-26605470 | None:intergenic | 50.0% | |
| TCTACCGTCCAAAAGCCGTA+TGG | + | chr6_4:26605466-26605485 | None:intergenic | 50.0% | |
| TTTGGACGGTAGAACGAACG+GGG | - | chr6_4:26605473-26605492 | Msa0983490:intron | 50.0% | |
| TATATCCCCGCGTTCTTGCA+CGG | + | chr6_4:26605535-26605554 | None:intergenic | 50.0% | |
| TGTTGTAGTCGGTCCGTGAA+GGG | + | chr6_4:26605578-26605597 | None:intergenic | 50.0% | |
| TTGTTGTAGTCGGTCCGTGA+AGG | + | chr6_4:26605579-26605598 | None:intergenic | 50.0% | |
| !! | AGTCGCGAGCTTGTTGTAGT+CGG | + | chr6_4:26605589-26605608 | None:intergenic | 50.0% |
| !! | ACAGAAGCGTTCGCCAAGAT+AGG | + | chr6_4:26605664-26605683 | None:intergenic | 50.0% |
| TGACGAAGGTTCCCGACTTT+CGG | + | chr6_4:26605747-26605766 | None:intergenic | 50.0% | |
| ACAAAGGGAAGGTCGTTTCC+CGG | + | chr6_4:26605945-26605964 | None:intergenic | 50.0% | |
| CTTCCATAGAAGAACCCGTG+TGG | + | chr6_4:26606065-26606084 | None:intergenic | 50.0% | |
| CACACGGGTTCTTCTATGGA+AGG | - | chr6_4:26606063-26606082 | Msa0983490:CDS | 50.0% | |
| CACGGGTTCTTCTATGGAAG+GGG | - | chr6_4:26606065-26606084 | Msa0983490:CDS | 50.0% | |
| GCCCCACCTCACATAGAATA+AGG | + | chr6_4:26606095-26606114 | None:intergenic | 50.0% | |
| AGCGGAACCTAGATAGAACG+CGG | - | chr6_4:26606124-26606143 | Msa0983490:CDS | 50.0% | |
| AAGCATGGTCACTGTATCGG+CGG | + | chr6_4:26606158-26606177 | None:intergenic | 50.0% | |
| ATGGTCAGAGCTGGTAAGCA+TGG | + | chr6_4:26606173-26606192 | None:intergenic | 50.0% | |
| CTTGCTTCTCTTCTCCTAGG+CGG | - | chr6_4:26606222-26606241 | Msa0983490:intron | 50.0% | |
| ! | GGGACCTTCTTTTTCTCCAG+CGG | + | chr6_4:26606337-26606356 | None:intergenic | 50.0% |
| TTTCTCTGATAGGGGGTTGC+GGG | + | chr6_4:26606515-26606534 | None:intergenic | 50.0% | |
| CTTTCTCTGATAGGGGGTTG+CGG | + | chr6_4:26606516-26606535 | None:intergenic | 50.0% | |
| CCAAGGCTTTCTCTGATAGG+GGG | + | chr6_4:26606522-26606541 | None:intergenic | 50.0% | |
| CCTCCAAGGCTTTCTCTGAT+AGG | + | chr6_4:26606525-26606544 | None:intergenic | 50.0% | |
| CCTATCAGAGAAAGCCTTGG+AGG | - | chr6_4:26606522-26606541 | Msa0983490:CDS | 50.0% | |
| CCCCGAATTTCATCAGTTCC+AGG | + | chr6_4:26606574-26606593 | None:intergenic | 50.0% | |
| GGAATCGGTCACTATACTGG+GGG | - | chr6_4:26606601-26606620 | Msa0983490:intron | 50.0% | |
| GAATCGGTCACTATACTGGG+GGG | - | chr6_4:26606602-26606621 | Msa0983490:intron | 50.0% | |
| AATCGGTCACTATACTGGGG+GGG | - | chr6_4:26606603-26606622 | Msa0983490:intron | 50.0% | |
| GGAAGATTGTGTCCAGGATC+TGG | + | chr6_4:26606740-26606759 | None:intergenic | 50.0% | |
| ATGGAGAGGCTAGAAAAGGC+GGG | + | chr6_4:26606784-26606803 | None:intergenic | 50.0% | |
| GATGGAGAGGCTAGAAAAGG+CGG | + | chr6_4:26606785-26606804 | None:intergenic | 50.0% | |
| GCTAGGTAAGCAAGATGGAG+AGG | + | chr6_4:26606798-26606817 | None:intergenic | 50.0% | |
| TCGAATCGGGGCCAATTCAT+TGG | + | chr6_4:26606896-26606915 | None:intergenic | 50.0% | |
| ! | GGCCCCGATTCGATCAATAA+TGG | - | chr6_4:26606903-26606922 | Msa0983490:CDS | 50.0% |
| CATGGACGCCCAACAAAACT+CGG | - | chr6_4:26606955-26606974 | Msa0983490:intron | 50.0% | |
| AGAACGAGCTGACGACTACA+GGG | + | chr6_4:26605347-26605366 | None:intergenic | 50.0% | |
| AAGAACGAGCTGACGACTAC+AGG | + | chr6_4:26605348-26605367 | None:intergenic | 50.0% | |
| CGTTCTTGACAGATCCGATC+GGG | - | chr6_4:26605361-26605380 | Msa0983490:intron | 50.0% | |
| CCGATCGGGTGTTCATAATC+TGG | - | chr6_4:26605375-26605394 | Msa0983490:intron | 50.0% | |
| GGATTCGAACCTTTGCATGC+CGG | - | chr6_4:26605405-26605424 | Msa0983490:intron | 50.0% | |
| TGCATGCCGGTACCAAAAAC+CGG | - | chr6_4:26605418-26605437 | Msa0983490:intron | 50.0% | |
| !!! | AAGGCACCGGTTTTTGGTAC+CGG | + | chr6_4:26605427-26605446 | None:intergenic | 50.0% |
| !!! | AGTGGTAAGGCACCGGTTTT+TGG | + | chr6_4:26605433-26605452 | None:intergenic | 50.0% |
| AAAACCGGTGCCTTACCACT+TGG | - | chr6_4:26605433-26605452 | Msa0983490:intron | 50.0% | |
| ATAGCCAAGTGGTAAGGCAC+CGG | + | chr6_4:26605440-26605459 | None:intergenic | 50.0% | |
| CCGTATGGAGTATAGCCAAG+TGG | + | chr6_4:26605451-26605470 | None:intergenic | 50.0% | |
| TCTACCGTCCAAAAGCCGTA+TGG | + | chr6_4:26605466-26605485 | None:intergenic | 50.0% | |
| TTTGGACGGTAGAACGAACG+GGG | - | chr6_4:26605473-26605492 | Msa0983490:intron | 50.0% | |
| TATATCCCCGCGTTCTTGCA+CGG | + | chr6_4:26605535-26605554 | None:intergenic | 50.0% | |
| TGTTGTAGTCGGTCCGTGAA+GGG | + | chr6_4:26605578-26605597 | None:intergenic | 50.0% | |
| TTGTTGTAGTCGGTCCGTGA+AGG | + | chr6_4:26605579-26605598 | None:intergenic | 50.0% | |
| !! | AGTCGCGAGCTTGTTGTAGT+CGG | + | chr6_4:26605589-26605608 | None:intergenic | 50.0% |
| !! | ACAGAAGCGTTCGCCAAGAT+AGG | + | chr6_4:26605664-26605683 | None:intergenic | 50.0% |
| TGACGAAGGTTCCCGACTTT+CGG | + | chr6_4:26605747-26605766 | None:intergenic | 50.0% | |
| ACAAAGGGAAGGTCGTTTCC+CGG | + | chr6_4:26605945-26605964 | None:intergenic | 50.0% | |
| CTTCCATAGAAGAACCCGTG+TGG | + | chr6_4:26606065-26606084 | None:intergenic | 50.0% | |
| CACACGGGTTCTTCTATGGA+AGG | - | chr6_4:26606063-26606082 | Msa0983490:CDS | 50.0% | |
| CACGGGTTCTTCTATGGAAG+GGG | - | chr6_4:26606065-26606084 | Msa0983490:CDS | 50.0% | |
| GCCCCACCTCACATAGAATA+AGG | + | chr6_4:26606095-26606114 | None:intergenic | 50.0% | |
| AGCGGAACCTAGATAGAACG+CGG | - | chr6_4:26606124-26606143 | Msa0983490:CDS | 50.0% | |
| AAGCATGGTCACTGTATCGG+CGG | + | chr6_4:26606158-26606177 | None:intergenic | 50.0% | |
| ATGGTCAGAGCTGGTAAGCA+TGG | + | chr6_4:26606173-26606192 | None:intergenic | 50.0% | |
| CTTGCTTCTCTTCTCCTAGG+CGG | - | chr6_4:26606222-26606241 | Msa0983490:intron | 50.0% | |
| ! | GGGACCTTCTTTTTCTCCAG+CGG | + | chr6_4:26606337-26606356 | None:intergenic | 50.0% |
| TTTCTCTGATAGGGGGTTGC+GGG | + | chr6_4:26606515-26606534 | None:intergenic | 50.0% | |
| CTTTCTCTGATAGGGGGTTG+CGG | + | chr6_4:26606516-26606535 | None:intergenic | 50.0% | |
| CCAAGGCTTTCTCTGATAGG+GGG | + | chr6_4:26606522-26606541 | None:intergenic | 50.0% | |
| CCTCCAAGGCTTTCTCTGAT+AGG | + | chr6_4:26606525-26606544 | None:intergenic | 50.0% | |
| CCTATCAGAGAAAGCCTTGG+AGG | - | chr6_4:26606522-26606541 | Msa0983490:CDS | 50.0% | |
| CCCCGAATTTCATCAGTTCC+AGG | + | chr6_4:26606574-26606593 | None:intergenic | 50.0% | |
| GGAATCGGTCACTATACTGG+GGG | - | chr6_4:26606601-26606620 | Msa0983490:intron | 50.0% | |
| GAATCGGTCACTATACTGGG+GGG | - | chr6_4:26606602-26606621 | Msa0983490:intron | 50.0% | |
| AATCGGTCACTATACTGGGG+GGG | - | chr6_4:26606603-26606622 | Msa0983490:intron | 50.0% | |
| GGAAGATTGTGTCCAGGATC+TGG | + | chr6_4:26606740-26606759 | None:intergenic | 50.0% | |
| ATGGAGAGGCTAGAAAAGGC+GGG | + | chr6_4:26606784-26606803 | None:intergenic | 50.0% | |
| GATGGAGAGGCTAGAAAAGG+CGG | + | chr6_4:26606785-26606804 | None:intergenic | 50.0% | |
| GCTAGGTAAGCAAGATGGAG+AGG | + | chr6_4:26606798-26606817 | None:intergenic | 50.0% | |
| TCGAATCGGGGCCAATTCAT+TGG | + | chr6_4:26606896-26606915 | None:intergenic | 50.0% | |
| ! | GGCCCCGATTCGATCAATAA+TGG | - | chr6_4:26606903-26606922 | Msa0983490:CDS | 50.0% |
| CATGGACGCCCAACAAAACT+CGG | - | chr6_4:26606955-26606974 | Msa0983490:intron | 50.0% | |
| GAACGAGCTGACGACTACAG+GGG | + | chr6_4:26605346-26605365 | None:intergenic | 55.0% | |
| CGGGAACCTTCGTCAGCATT+TGG | - | chr6_4:26605752-26605771 | Msa0983490:intron | 55.0% | |
| CCGGTAACCTTCGTTACCGT+CGG | + | chr6_4:26605879-26605898 | None:intergenic | 55.0% | |
| CCGACGGTAACGAAGGTTAC+CGG | - | chr6_4:26605876-26605895 | Msa0983490:CDS | 55.0% | |
| CGACGGTAACGAAGGTTACC+GGG | - | chr6_4:26605877-26605896 | Msa0983490:CDS | 55.0% | |
| CAAAGGGAAGGTCGTTTCCC+GGG | + | chr6_4:26605944-26605963 | None:intergenic | 55.0% | |
| TCAATCCCCTCTCACCCACA+CGG | - | chr6_4:26606047-26606066 | Msa0983490:CDS | 55.0% | |
| AAGAACCCGTGTGGGTGAGA+GGG | + | chr6_4:26606056-26606075 | None:intergenic | 55.0% | |
| CACCCACACGGGTTCTTCTA+TGG | - | chr6_4:26606059-26606078 | Msa0983490:CDS | 55.0% | |
| GGAGCCCCTCAGAAAGTAAC+CGG | + | chr6_4:26606316-26606335 | None:intergenic | 55.0% | |
| GGCTCCGCTGGAGAAAAAGA+AGG | - | chr6_4:26606330-26606349 | Msa0983490:intron | 55.0% | |
| AAAGCTCGGCGAGAAAGGGT+TGG | - | chr6_4:26606389-26606408 | Msa0983490:intron | 55.0% | |
| CCCCCTATCAGAGAAAGCCT+TGG | - | chr6_4:26606519-26606538 | Msa0983490:CDS | 55.0% | |
| TCCTCTTGGAGAGGAAAGCC+TGG | - | chr6_4:26606553-26606572 | Msa0983490:intron | 55.0% | |
| TCCAGGCTTTCCTCTCCAAG+AGG | + | chr6_4:26606557-26606576 | None:intergenic | 55.0% | |
| ATCGGTCACTATACTGGGGG+GGG | - | chr6_4:26606604-26606623 | Msa0983490:intron | 55.0% | |
| TGGAGAGGCTAGAAAAGGCG+GGG | + | chr6_4:26606783-26606802 | None:intergenic | 55.0% | |
| GACGCCCAACAAAACTCGGT+CGG | - | chr6_4:26606959-26606978 | Msa0983490:intron | 55.0% | |
| !!! | CCGACCGACCGAGTTTTGTT+GGG | + | chr6_4:26606966-26606985 | None:intergenic | 55.0% |
| CCCAACAAAACTCGGTCGGT+CGG | - | chr6_4:26606963-26606982 | Msa0983490:intron | 55.0% | |
| !! | ACCGACCGACCGAGTTTTGT+TGG | + | chr6_4:26606967-26606986 | None:intergenic | 55.0% |
| ACAAAACTCGGTCGGTCGGT+TGG | - | chr6_4:26606967-26606986 | Msa0983490:intron | 55.0% | |
| ATTCGAGCGAGAGCCCAAAC+GGG | + | chr6_4:26607098-26607117 | None:intergenic | 55.0% | |
| GATTCGAGCGAGAGCCCAAA+CGG | + | chr6_4:26607099-26607118 | None:intergenic | 55.0% | |
| GTTTGGGCTCTCGCTCGAAT+CGG | - | chr6_4:26607098-26607117 | Msa0983490:CDS | 55.0% | |
| GAACGAGCTGACGACTACAG+GGG | + | chr6_4:26605346-26605365 | None:intergenic | 55.0% | |
| CGGGAACCTTCGTCAGCATT+TGG | - | chr6_4:26605752-26605771 | Msa0983490:intron | 55.0% | |
| CCGGTAACCTTCGTTACCGT+CGG | + | chr6_4:26605879-26605898 | None:intergenic | 55.0% | |
| CCGACGGTAACGAAGGTTAC+CGG | - | chr6_4:26605876-26605895 | Msa0983490:CDS | 55.0% | |
| CGACGGTAACGAAGGTTACC+GGG | - | chr6_4:26605877-26605896 | Msa0983490:CDS | 55.0% | |
| CAAAGGGAAGGTCGTTTCCC+GGG | + | chr6_4:26605944-26605963 | None:intergenic | 55.0% | |
| TCAATCCCCTCTCACCCACA+CGG | - | chr6_4:26606047-26606066 | Msa0983490:CDS | 55.0% | |
| AAGAACCCGTGTGGGTGAGA+GGG | + | chr6_4:26606056-26606075 | None:intergenic | 55.0% | |
| CACCCACACGGGTTCTTCTA+TGG | - | chr6_4:26606059-26606078 | Msa0983490:CDS | 55.0% | |
| GGAGCCCCTCAGAAAGTAAC+CGG | + | chr6_4:26606316-26606335 | None:intergenic | 55.0% | |
| GGCTCCGCTGGAGAAAAAGA+AGG | - | chr6_4:26606330-26606349 | Msa0983490:intron | 55.0% | |
| AAAGCTCGGCGAGAAAGGGT+TGG | - | chr6_4:26606389-26606408 | Msa0983490:intron | 55.0% | |
| CCCCCTATCAGAGAAAGCCT+TGG | - | chr6_4:26606519-26606538 | Msa0983490:CDS | 55.0% | |
| TCCTCTTGGAGAGGAAAGCC+TGG | - | chr6_4:26606553-26606572 | Msa0983490:intron | 55.0% | |
| TCCAGGCTTTCCTCTCCAAG+AGG | + | chr6_4:26606557-26606576 | None:intergenic | 55.0% | |
| ATCGGTCACTATACTGGGGG+GGG | - | chr6_4:26606604-26606623 | Msa0983490:intron | 55.0% | |
| TGGAGAGGCTAGAAAAGGCG+GGG | + | chr6_4:26606783-26606802 | None:intergenic | 55.0% | |
| GACGCCCAACAAAACTCGGT+CGG | - | chr6_4:26606959-26606978 | Msa0983490:intron | 55.0% | |
| !!! | CCGACCGACCGAGTTTTGTT+GGG | + | chr6_4:26606966-26606985 | None:intergenic | 55.0% |
| CCCAACAAAACTCGGTCGGT+CGG | - | chr6_4:26606963-26606982 | Msa0983490:intron | 55.0% | |
| !! | ACCGACCGACCGAGTTTTGT+TGG | + | chr6_4:26606967-26606986 | None:intergenic | 55.0% |
| ACAAAACTCGGTCGGTCGGT+TGG | - | chr6_4:26606967-26606986 | Msa0983490:intron | 55.0% | |
| ATTCGAGCGAGAGCCCAAAC+GGG | + | chr6_4:26607098-26607117 | None:intergenic | 55.0% | |
| GATTCGAGCGAGAGCCCAAA+CGG | + | chr6_4:26607099-26607118 | None:intergenic | 55.0% | |
| GTTTGGGCTCTCGCTCGAAT+CGG | - | chr6_4:26607098-26607117 | Msa0983490:CDS | 55.0% | |
| AGGGAACCGTGCATTCCTCC+CGG | - | chr6_4:26605290-26605309 | Msa0983490:CDS | 60.0% | |
| GCTGACGACTACAGGGGAAG+CGG | + | chr6_4:26605340-26605359 | None:intergenic | 60.0% | |
| ACGGTAGAACGAACGGGGAG+AGG | - | chr6_4:26605478-26605497 | Msa0983490:intron | 60.0% | |
| CGGTAGAACGAACGGGGAGA+GGG | - | chr6_4:26605479-26605498 | Msa0983490:intron | 60.0% | |
| GGTAGAACGAACGGGGAGAG+GGG | - | chr6_4:26605480-26605499 | Msa0983490:intron | 60.0% | |
| GTAGAACGAACGGGGAGAGG+GGG | - | chr6_4:26605481-26605500 | Msa0983490:intron | 60.0% | |
| AGAGGGGGAAGGGAGAAGCA+GGG | - | chr6_4:26605496-26605515 | Msa0983490:intron | 60.0% | |
| GAACGAGCCGTGCAAGAACG+CGG | - | chr6_4:26605525-26605544 | Msa0983490:intron | 60.0% | |
| AACGAGCCGTGCAAGAACGC+GGG | - | chr6_4:26605526-26605545 | Msa0983490:intron | 60.0% | |
| TTCCCGACTTTCGGTGGACG+CGG | + | chr6_4:26605738-26605757 | None:intergenic | 60.0% | |
| CGAAGGTTCCCGACTTTCGG+TGG | + | chr6_4:26605744-26605763 | None:intergenic | 60.0% | |
| ACCTTGCGGTTCCCGGTAAC+CGG | + | chr6_4:26605912-26605931 | None:intergenic | 60.0% | |
| CCTTGCAACCTTGCGGTTCC+CGG | + | chr6_4:26605919-26605938 | None:intergenic | 60.0% | |
| CCGGGAACCTTGCAACCTTG+CGG | + | chr6_4:26605926-26605945 | None:intergenic | 60.0% | |
| CCGCAAGGTTGCAAGGTTCC+CGG | - | chr6_4:26605923-26605942 | Msa0983490:intron | 60.0% | |
| CGCAAGGTTGCAAGGTTCCC+GGG | - | chr6_4:26605924-26605943 | Msa0983490:intron | 60.0% | |
| CAATCCCCTCTCACCCACAC+GGG | - | chr6_4:26606048-26606067 | Msa0983490:CDS | 60.0% | |
| AGAACCCGTGTGGGTGAGAG+GGG | + | chr6_4:26606055-26606074 | None:intergenic | 60.0% | |
| GAAGAACCCGTGTGGGTGAG+AGG | + | chr6_4:26606057-26606076 | None:intergenic | 60.0% | |
| AGGTGGGGCGTACGTAAGAG+CGG | - | chr6_4:26606106-26606125 | Msa0983490:CDS | 60.0% | |
| CTAGATAGAACGCGGAGCGC+CGG | - | chr6_4:26606132-26606151 | Msa0983490:CDS | 60.0% | |
| ! | ATGGTCACTGTATCGGCGGC+CGG | + | chr6_4:26606154-26606173 | None:intergenic | 60.0% |
| TAGGCGGCAATGGTCAGAGC+TGG | + | chr6_4:26606182-26606201 | None:intergenic | 60.0% | |
| CGCGAAGAAAAGGCAGCGAG+CGG | - | chr6_4:26606263-26606282 | Msa0983490:intron | 60.0% | |
| TTAGTAGAGCTACCGGCCGC+CGG | - | chr6_4:26606294-26606313 | Msa0983490:intron | 60.0% | |
| CTCAGAAAGTAACCGGCGGC+CGG | + | chr6_4:26606309-26606328 | None:intergenic | 60.0% | |
| ! | GGCCGCCGGTTACTTTCTGA+GGG | - | chr6_4:26606308-26606327 | Msa0983490:intron | 60.0% |
| ! | GCCGCCGGTTACTTTCTGAG+GGG | - | chr6_4:26606309-26606328 | Msa0983490:intron | 60.0% |
| GCCCCTCAGAAAGTAACCGG+CGG | + | chr6_4:26606313-26606332 | None:intergenic | 60.0% | |
| ! | TACTTTCTGAGGGGCTCCGC+TGG | - | chr6_4:26606318-26606337 | Msa0983490:intron | 60.0% |
| AGAGGATGCGCGAACCTCCA+AGG | + | chr6_4:26606539-26606558 | None:intergenic | 60.0% | |
| TGGAGGTTCGCGCATCCTCT+TGG | - | chr6_4:26606539-26606558 | Msa0983490:CDS | 60.0% | |
| GTTCGCGCATCCTCTTGGAG+AGG | - | chr6_4:26606544-26606563 | Msa0983490:intron | 60.0% | |
| GCAAGGGGCTCTCCATCTCT+AGG | + | chr6_4:26606761-26606780 | None:intergenic | 60.0% | |
| GCTAGAAAAGGCGGGGCAAG+GGG | + | chr6_4:26606776-26606795 | None:intergenic | 60.0% | |
| GGCTAGAAAAGGCGGGGCAA+GGG | + | chr6_4:26606777-26606796 | None:intergenic | 60.0% | |
| AGGCTAGAAAAGGCGGGGCA+AGG | + | chr6_4:26606778-26606797 | None:intergenic | 60.0% | |
| TTCGAGCGAGAGCCCAAACG+GGG | + | chr6_4:26607097-26607116 | None:intergenic | 60.0% | |
| AGGGAACCGTGCATTCCTCC+CGG | - | chr6_4:26605290-26605309 | Msa0983490:CDS | 60.0% | |
| GCTGACGACTACAGGGGAAG+CGG | + | chr6_4:26605340-26605359 | None:intergenic | 60.0% | |
| ACGGTAGAACGAACGGGGAG+AGG | - | chr6_4:26605478-26605497 | Msa0983490:intron | 60.0% | |
| CGGTAGAACGAACGGGGAGA+GGG | - | chr6_4:26605479-26605498 | Msa0983490:intron | 60.0% | |
| GGTAGAACGAACGGGGAGAG+GGG | - | chr6_4:26605480-26605499 | Msa0983490:intron | 60.0% | |
| GTAGAACGAACGGGGAGAGG+GGG | - | chr6_4:26605481-26605500 | Msa0983490:intron | 60.0% | |
| AGAGGGGGAAGGGAGAAGCA+GGG | - | chr6_4:26605496-26605515 | Msa0983490:intron | 60.0% | |
| GAACGAGCCGTGCAAGAACG+CGG | - | chr6_4:26605525-26605544 | Msa0983490:intron | 60.0% | |
| AACGAGCCGTGCAAGAACGC+GGG | - | chr6_4:26605526-26605545 | Msa0983490:intron | 60.0% | |
| TTCCCGACTTTCGGTGGACG+CGG | + | chr6_4:26605738-26605757 | None:intergenic | 60.0% | |
| CGAAGGTTCCCGACTTTCGG+TGG | + | chr6_4:26605744-26605763 | None:intergenic | 60.0% | |
| ACCTTGCGGTTCCCGGTAAC+CGG | + | chr6_4:26605912-26605931 | None:intergenic | 60.0% | |
| CCTTGCAACCTTGCGGTTCC+CGG | + | chr6_4:26605919-26605938 | None:intergenic | 60.0% | |
| CCGGGAACCTTGCAACCTTG+CGG | + | chr6_4:26605926-26605945 | None:intergenic | 60.0% | |
| CCGCAAGGTTGCAAGGTTCC+CGG | - | chr6_4:26605923-26605942 | Msa0983490:intron | 60.0% | |
| CGCAAGGTTGCAAGGTTCCC+GGG | - | chr6_4:26605924-26605943 | Msa0983490:intron | 60.0% | |
| CAATCCCCTCTCACCCACAC+GGG | - | chr6_4:26606048-26606067 | Msa0983490:CDS | 60.0% | |
| AGAACCCGTGTGGGTGAGAG+GGG | + | chr6_4:26606055-26606074 | None:intergenic | 60.0% | |
| GAAGAACCCGTGTGGGTGAG+AGG | + | chr6_4:26606057-26606076 | None:intergenic | 60.0% | |
| AGGTGGGGCGTACGTAAGAG+CGG | - | chr6_4:26606106-26606125 | Msa0983490:CDS | 60.0% | |
| CTAGATAGAACGCGGAGCGC+CGG | - | chr6_4:26606132-26606151 | Msa0983490:CDS | 60.0% | |
| ! | ATGGTCACTGTATCGGCGGC+CGG | + | chr6_4:26606154-26606173 | None:intergenic | 60.0% |
| TAGGCGGCAATGGTCAGAGC+TGG | + | chr6_4:26606182-26606201 | None:intergenic | 60.0% | |
| CGCGAAGAAAAGGCAGCGAG+CGG | - | chr6_4:26606263-26606282 | Msa0983490:intron | 60.0% | |
| TTAGTAGAGCTACCGGCCGC+CGG | - | chr6_4:26606294-26606313 | Msa0983490:intron | 60.0% | |
| CTCAGAAAGTAACCGGCGGC+CGG | + | chr6_4:26606309-26606328 | None:intergenic | 60.0% | |
| ! | GGCCGCCGGTTACTTTCTGA+GGG | - | chr6_4:26606308-26606327 | Msa0983490:intron | 60.0% |
| ! | GCCGCCGGTTACTTTCTGAG+GGG | - | chr6_4:26606309-26606328 | Msa0983490:intron | 60.0% |
| GCCCCTCAGAAAGTAACCGG+CGG | + | chr6_4:26606313-26606332 | None:intergenic | 60.0% | |
| ! | TACTTTCTGAGGGGCTCCGC+TGG | - | chr6_4:26606318-26606337 | Msa0983490:intron | 60.0% |
| AGAGGATGCGCGAACCTCCA+AGG | + | chr6_4:26606539-26606558 | None:intergenic | 60.0% | |
| TGGAGGTTCGCGCATCCTCT+TGG | - | chr6_4:26606539-26606558 | Msa0983490:CDS | 60.0% | |
| GTTCGCGCATCCTCTTGGAG+AGG | - | chr6_4:26606544-26606563 | Msa0983490:intron | 60.0% | |
| GCAAGGGGCTCTCCATCTCT+AGG | + | chr6_4:26606761-26606780 | None:intergenic | 60.0% | |
| GCTAGAAAAGGCGGGGCAAG+GGG | + | chr6_4:26606776-26606795 | None:intergenic | 60.0% | |
| GGCTAGAAAAGGCGGGGCAA+GGG | + | chr6_4:26606777-26606796 | None:intergenic | 60.0% | |
| AGGCTAGAAAAGGCGGGGCA+AGG | + | chr6_4:26606778-26606797 | None:intergenic | 60.0% | |
| TTCGAGCGAGAGCCCAAACG+GGG | + | chr6_4:26607097-26607116 | None:intergenic | 60.0% | |
| GGGAGGAATGCACGGTTCCC+TGG | + | chr6_4:26605291-26605310 | None:intergenic | 65.0% | |
| GGGAACCGTGCATTCCTCCC+GGG | - | chr6_4:26605291-26605310 | Msa0983490:CDS | 65.0% | |
| ! | ATTCCTCCCGGGCTGGGCTA+AGG | - | chr6_4:26605302-26605321 | Msa0983490:CDS | 65.0% |
| ! | TTCCTCCCGGGCTGGGCTAA+GGG | - | chr6_4:26605303-26605322 | Msa0983490:CDS | 65.0% |
| TGCAGTCCCTTAGCCCAGCC+CGG | + | chr6_4:26605312-26605331 | None:intergenic | 65.0% | |
| AACGAACGGGGAGAGGGGGA+AGG | - | chr6_4:26605485-26605504 | Msa0983490:intron | 65.0% | |
| ACGAACGGGGAGAGGGGGAA+GGG | - | chr6_4:26605486-26605505 | Msa0983490:intron | 65.0% | |
| GAGAGGGGGAAGGGAGAAGC+AGG | - | chr6_4:26605495-26605514 | Msa0983490:intron | 65.0% | |
| ACGAGCCGTGCAAGAACGCG+GGG | - | chr6_4:26605527-26605546 | Msa0983490:intron | 65.0% | |
| GCTCCGCGTCCACCGAAAGT+CGG | - | chr6_4:26605732-26605751 | Msa0983490:intron | 65.0% | |
| CTCCGCGTCCACCGAAAGTC+GGG | - | chr6_4:26605733-26605752 | Msa0983490:intron | 65.0% | |
| ! | GGCTTGGTTGCGGGAACCGA+CGG | - | chr6_4:26605860-26605879 | Msa0983490:CDS | 65.0% |
| GCGGGAACCGACGGTAACGA+AGG | - | chr6_4:26605869-26605888 | Msa0983490:CDS | 65.0% | |
| CGAAGGTTACCGGGCCGATG+CGG | - | chr6_4:26605886-26605905 | Msa0983490:CDS | 65.0% | |
| TTCCCGGTAACCGGCCGCAT+CGG | + | chr6_4:26605903-26605922 | None:intergenic | 65.0% | |
| CCGGGAACCGCAAGGTTGCA+AGG | - | chr6_4:26605916-26605935 | Msa0983490:CDS | 65.0% | |
| CGGCGCTCCGCGTTCTATCT+AGG | + | chr6_4:26606134-26606153 | None:intergenic | 65.0% | |
| ACATGTGCAGGGAGCCGCCT+AGG | + | chr6_4:26606239-26606258 | None:intergenic | 65.0% | |
| ! | CGGCCGCCGGTTACTTTCTG+AGG | - | chr6_4:26606307-26606326 | Msa0983490:intron | 65.0% |
| ACGTTCTCGCCTCCCCCGTT+TGG | - | chr6_4:26607081-26607100 | Msa0983490:CDS | 65.0% | |
| CGTTCTCGCCTCCCCCGTTT+GGG | - | chr6_4:26607082-26607101 | Msa0983490:CDS | 65.0% | |
| TCGAGCGAGAGCCCAAACGG+GGG | + | chr6_4:26607096-26607115 | None:intergenic | 65.0% | |
| GGGAGGAATGCACGGTTCCC+TGG | + | chr6_4:26605291-26605310 | None:intergenic | 65.0% | |
| GGGAACCGTGCATTCCTCCC+GGG | - | chr6_4:26605291-26605310 | Msa0983490:CDS | 65.0% | |
| ! | ATTCCTCCCGGGCTGGGCTA+AGG | - | chr6_4:26605302-26605321 | Msa0983490:CDS | 65.0% |
| ! | TTCCTCCCGGGCTGGGCTAA+GGG | - | chr6_4:26605303-26605322 | Msa0983490:CDS | 65.0% |
| TGCAGTCCCTTAGCCCAGCC+CGG | + | chr6_4:26605312-26605331 | None:intergenic | 65.0% | |
| AACGAACGGGGAGAGGGGGA+AGG | - | chr6_4:26605485-26605504 | Msa0983490:intron | 65.0% | |
| ACGAACGGGGAGAGGGGGAA+GGG | - | chr6_4:26605486-26605505 | Msa0983490:intron | 65.0% | |
| GAGAGGGGGAAGGGAGAAGC+AGG | - | chr6_4:26605495-26605514 | Msa0983490:intron | 65.0% | |
| ACGAGCCGTGCAAGAACGCG+GGG | - | chr6_4:26605527-26605546 | Msa0983490:intron | 65.0% | |
| GCTCCGCGTCCACCGAAAGT+CGG | - | chr6_4:26605732-26605751 | Msa0983490:intron | 65.0% | |
| CTCCGCGTCCACCGAAAGTC+GGG | - | chr6_4:26605733-26605752 | Msa0983490:intron | 65.0% | |
| ! | GGCTTGGTTGCGGGAACCGA+CGG | - | chr6_4:26605860-26605879 | Msa0983490:CDS | 65.0% |
| GCGGGAACCGACGGTAACGA+AGG | - | chr6_4:26605869-26605888 | Msa0983490:CDS | 65.0% | |
| CGAAGGTTACCGGGCCGATG+CGG | - | chr6_4:26605886-26605905 | Msa0983490:CDS | 65.0% | |
| TTCCCGGTAACCGGCCGCAT+CGG | + | chr6_4:26605903-26605922 | None:intergenic | 65.0% | |
| CCGGGAACCGCAAGGTTGCA+AGG | - | chr6_4:26605916-26605935 | Msa0983490:CDS | 65.0% | |
| CGGCGCTCCGCGTTCTATCT+AGG | + | chr6_4:26606134-26606153 | None:intergenic | 65.0% | |
| ACATGTGCAGGGAGCCGCCT+AGG | + | chr6_4:26606239-26606258 | None:intergenic | 65.0% | |
| ! | CGGCCGCCGGTTACTTTCTG+AGG | - | chr6_4:26606307-26606326 | Msa0983490:intron | 65.0% |
| ACGTTCTCGCCTCCCCCGTT+TGG | - | chr6_4:26607081-26607100 | Msa0983490:CDS | 65.0% | |
| CGTTCTCGCCTCCCCCGTTT+GGG | - | chr6_4:26607082-26607101 | Msa0983490:CDS | 65.0% | |
| TCGAGCGAGAGCCCAAACGG+GGG | + | chr6_4:26607096-26607115 | None:intergenic | 65.0% | |
| ACCGTGCATTCCTCCCGGGC+TGG | - | chr6_4:26605295-26605314 | Msa0983490:CDS | 70.0% | |
| CCCAGCCCGGGAGGAATGCA+CGG | + | chr6_4:26605299-26605318 | None:intergenic | 70.0% | |
| CCGTGCATTCCTCCCGGGCT+GGG | - | chr6_4:26605296-26605315 | Msa0983490:CDS | 70.0% | |
| GCAGTCCCTTAGCCCAGCCC+GGG | + | chr6_4:26605311-26605330 | None:intergenic | 70.0% | |
| GCCGGTTACCGGGAACCGCA+AGG | - | chr6_4:26605908-26605927 | Msa0983490:CDS | 70.0% | |
| AGCGAGAGCCCAAACGGGGG+AGG | + | chr6_4:26607093-26607112 | None:intergenic | 70.0% | |
| ACCGTGCATTCCTCCCGGGC+TGG | - | chr6_4:26605295-26605314 | Msa0983490:CDS | 70.0% | |
| CCCAGCCCGGGAGGAATGCA+CGG | + | chr6_4:26605299-26605318 | None:intergenic | 70.0% | |
| CCGTGCATTCCTCCCGGGCT+GGG | - | chr6_4:26605296-26605315 | Msa0983490:CDS | 70.0% | |
| GCAGTCCCTTAGCCCAGCCC+GGG | + | chr6_4:26605311-26605330 | None:intergenic | 70.0% | |
| GCCGGTTACCGGGAACCGCA+AGG | - | chr6_4:26605908-26605927 | Msa0983490:CDS | 70.0% | |
| AGCGAGAGCCCAAACGGGGG+AGG | + | chr6_4:26607093-26607112 | None:intergenic | 70.0% | |
| GTCCCTTAGCCCAGCCCGGG+AGG | + | chr6_4:26605308-26605327 | None:intergenic | 75.0% | |
| GGTTACCGGGCCGATGCGGC+CGG | - | chr6_4:26605890-26605909 | Msa0983490:CDS | 75.0% | |
| ! | GGTAACCGGCCGCATCGGCC+CGG | + | chr6_4:26605898-26605917 | None:intergenic | 75.0% |
| GGGCCGATGCGGCCGGTTAC+CGG | - | chr6_4:26605897-26605916 | Msa0983490:CDS | 75.0% | |
| GGCCGATGCGGCCGGTTACC+GGG | - | chr6_4:26605898-26605917 | Msa0983490:CDS | 75.0% | |
| GTCCCTTAGCCCAGCCCGGG+AGG | + | chr6_4:26605308-26605327 | None:intergenic | 75.0% | |
| GGTTACCGGGCCGATGCGGC+CGG | - | chr6_4:26605890-26605909 | Msa0983490:CDS | 75.0% | |
| ! | GGTAACCGGCCGCATCGGCC+CGG | + | chr6_4:26605898-26605917 | None:intergenic | 75.0% |
| GGGCCGATGCGGCCGGTTAC+CGG | - | chr6_4:26605897-26605916 | Msa0983490:CDS | 75.0% | |
| GGCCGATGCGGCCGGTTACC+GGG | - | chr6_4:26605898-26605917 | Msa0983490:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 26605280 | 26607139 | 26605280 | ID=Msa0983490;Name=Msa0983490 |
| chr6_4 | mRNA | 26605280 | 26607139 | 26605280 | ID=Msa0983490-mRNA-1;Parent=Msa0983490;Name=Msa0983490-mRNA-1;_AED=0.34;_eAED=0.39;_QI=0|0|0|0.5|1|1|6|0|268 |
| chr6_4 | exon | 26607072 | 26607139 | 26607072 | ID=Msa0983490-mRNA-1:exon:7537;Parent=Msa0983490-mRNA-1 |
| chr6_4 | exon | 26606646 | 26606934 | 26606646 | ID=Msa0983490-mRNA-1:exon:7536;Parent=Msa0983490-mRNA-1 |
| chr6_4 | exon | 26606482 | 26606558 | 26606482 | ID=Msa0983490-mRNA-1:exon:7535;Parent=Msa0983490-mRNA-1 |
| chr6_4 | exon | 26606013 | 26606178 | 26606013 | ID=Msa0983490-mRNA-1:exon:7534;Parent=Msa0983490-mRNA-1 |
| chr6_4 | exon | 26605812 | 26605937 | 26605812 | ID=Msa0983490-mRNA-1:exon:7533;Parent=Msa0983490-mRNA-1 |
| chr6_4 | exon | 26605280 | 26605360 | 26605280 | ID=Msa0983490-mRNA-1:exon:7532;Parent=Msa0983490-mRNA-1 |
| chr6_4 | CDS | 26607072 | 26607139 | 26607072 | ID=Msa0983490-mRNA-1:cds;Parent=Msa0983490-mRNA-1 |
| chr6_4 | CDS | 26606646 | 26606934 | 26606646 | ID=Msa0983490-mRNA-1:cds;Parent=Msa0983490-mRNA-1 |
| chr6_4 | CDS | 26606482 | 26606558 | 26606482 | ID=Msa0983490-mRNA-1:cds;Parent=Msa0983490-mRNA-1 |
| chr6_4 | CDS | 26606013 | 26606178 | 26606013 | ID=Msa0983490-mRNA-1:cds;Parent=Msa0983490-mRNA-1 |
| chr6_4 | CDS | 26605812 | 26605937 | 26605812 | ID=Msa0983490-mRNA-1:cds;Parent=Msa0983490-mRNA-1 |
| chr6_4 | CDS | 26605280 | 26605360 | 26605280 | ID=Msa0983490-mRNA-1:cds;Parent=Msa0983490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
