AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0771750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771750 MtrunA17_Chr5g0425471 97.187 782 19 1 1 779 1 782 0.0 1579
Msa0771750 MtrunA17_Chr5g0425431 91.667 780 64 1 1 779 1 780 0.0 1476
Msa0771750 MtrunA17_Chr5g0425451 90.409 782 72 1 1 779 1 782 0.0 1452
Msa0771750 MtrunA17_Chr5g0425531 86.115 785 103 3 1 779 1 785 0.0 1386
Msa0771750 MtrunA17_Chr3g0115601 70.246 773 223 3 8 779 10 776 0.0 1168
Msa0771750 MtrunA17_Chr5g0411571 48.241 796 370 12 5 779 8 782 0.0 764
Msa0771750 MtrunA17_Chr1g0207281 50.067 751 358 12 27 769 34 775 0.0 744
Msa0771750 MtrunA17_Chr2g0294751 47.631 781 378 12 1 777 1 754 0.0 734
Msa0771750 MtrunA17_Chr2g0278761 48.545 756 360 12 33 779 40 775 0.0 728
Msa0771750 MtrunA17_Chr1g0194841 46.915 778 383 12 5 777 3 755 0.0 724
Msa0771750 MtrunA17_Chr7g0269871 47.200 750 375 10 33 777 28 761 0.0 721
Msa0771750 MtrunA17_Chr4g0050591 46.183 786 393 13 3 779 10 774 0.0 718
Msa0771750 MtrunA17_Chr6g0461231 27.164 670 359 30 33 635 14 621 9.46e-42 162
Msa0771750 MtrunA17_Chr6g0461191 27.607 652 337 27 54 635 35 621 2.29e-41 160
Msa0771750 MtrunA17_Chr3g0104081 27.032 603 348 22 47 592 22 589 4.38e-41 159
Msa0771750 MtrunA17_Chr2g0292341 27.417 631 331 27 54 610 37 614 1.93e-39 155
Msa0771750 MtrunA17_Chr3g0118971 26.923 650 356 28 54 641 35 627 4.76e-39 154
Msa0771750 MtrunA17_Chr7g0253561 27.327 666 335 29 47 635 4 597 1.05e-38 152
Msa0771750 MtrunA17_Chr6g0461211 27.718 653 335 30 54 635 35 621 7.80e-38 150
Msa0771750 MtrunA17_Chr6g0461221 26.484 657 346 29 54 639 36 626 4.02e-37 148
Msa0771750 MtrunA17_Chr5g0429581 25.662 604 352 22 49 592 7 573 3.19e-36 145
Msa0771750 MtrunA17_Chr5g0429541 25.421 594 342 22 54 592 12 559 1.83e-32 133
Msa0771750 MtrunA17_Chr7g0253551 27.714 433 243 19 47 433 29 437 7.54e-26 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771750 AT1G78060.1 63.878 753 261 7 31 779 22 767 0.0 1007
Msa0771750 AT5G10560.1 48.869 796 379 9 4 777 1 790 0.0 787
Msa0771750 AT3G19620.1 50.067 747 348 14 33 769 27 758 0.0 748
Msa0771750 AT5G09730.1 48.790 785 373 14 4 779 9 773 0.0 741
Msa0771750 AT5G64570.1 48.777 777 374 12 12 779 23 784 0.0 731
Msa0771750 AT1G02640.1 47.341 771 379 10 10 777 12 758 0.0 726
Msa0771750 AT5G49360.1 47.254 783 376 17 6 777 14 770 0.0 712
Msa0771750 AT5G64570.3 52.422 578 265 8 12 587 23 592 0.0 608
Msa0771750 AT5G64570.2 48.986 641 304 11 147 779 1 626 0.0 605
Msa0771750 AT5G09700.1 45.194 489 255 7 297 779 45 526 2.49e-135 411
Msa0771750 AT3G47040.4 27.019 644 372 26 47 638 10 607 2.17e-43 167
Msa0771750 AT3G47010.1 26.974 608 349 26 44 592 8 579 1.22e-41 161
Msa0771750 AT3G47040.1 26.324 661 380 27 47 638 10 632 7.87e-41 159
Msa0771750 AT3G47000.1 27.212 599 353 23 47 592 10 578 4.42e-40 157
Msa0771750 AT3G47010.2 26.809 608 349 27 44 592 8 578 5.18e-40 157
Msa0771750 AT3G47050.1 27.094 609 347 23 43 592 6 576 7.39e-39 153
Msa0771750 AT5G04885.3 25.280 625 361 24 53 614 36 617 1.39e-36 147
Msa0771750 AT5G04885.1 25.280 625 361 24 53 614 36 617 1.39e-36 147
Msa0771750 AT5G04885.2 25.280 625 361 24 53 614 53 634 1.60e-36 147
Msa0771750 AT3G47040.3 30.115 435 237 17 47 433 10 425 3.89e-35 139
Msa0771750 AT5G20950.2 28.261 414 226 16 57 421 36 427 6.94e-33 135
Msa0771750 AT5G20950.1 28.261 414 226 16 57 421 36 427 6.94e-33 135
Msa0771750 AT3G47000.3 29.314 423 231 16 47 421 10 412 7.84e-33 132
Msa0771750 AT5G20950.3 28.261 414 226 16 57 421 114 505 1.02e-32 135
Msa0771750 AT3G47010.4 28.160 451 250 19 44 445 8 433 2.85e-32 131
Msa0771750 AT3G47040.2 25.298 672 381 29 47 638 10 640 1.02e-31 132
Msa0771750 AT5G20940.1 26.897 580 326 24 83 634 112 621 1.46e-30 128
Msa0771750 AT3G62710.1 25.733 614 348 28 59 634 105 648 3.68e-29 124
Msa0771750 AT3G47010.3 27.059 425 256 20 193 592 5 400 6.39e-27 115
Msa0771750 AT3G47050.2 27.733 375 213 12 43 374 6 365 1.68e-25 110
Msa0771750 AT3G47000.2 26.730 419 270 17 191 592 3 401 1.63e-24 107

Find 210 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAAATTGGAGGGATTATT+TGG 0.068417 5_2:-44943820 Msa0771750:CDS
AACAACTTTAGATGATTTAT+TGG 0.151178 5_2:+44944186 None:intergenic
CACCAAACATAAACATATTT+AGG 0.152169 5_2:-44947462 Msa0771750:CDS
AATAAGTGATTATGTTATTT+TGG 0.156153 5_2:-44944014 Msa0771750:CDS
TTCTAAGAAGCCGGTTATTT+TGG 0.173735 5_2:-44943891 Msa0771750:CDS
GCTAAGAATAATGACAAAAT+TGG 0.212120 5_2:-44943833 Msa0771750:CDS
TTTGAAGGTGGAAAACTAAT+TGG 0.218848 5_2:-44947340 Msa0771750:CDS
TTTCCATTTCTACCTTTCTT+TGG 0.223144 5_2:+44942320 None:intergenic
AAATTGTAATCTGCACAATT+TGG 0.238972 5_2:+44946274 None:intergenic
ATTATCATGATTATATTATC+AGG 0.244826 5_2:+44942007 None:intergenic
AAGCTCAAGGGATGACGTTT+TGG 0.262022 5_2:-44947486 Msa0771750:CDS
TCTTGTCCTCTTCCCCATCT+TGG 0.278328 5_2:+44947436 None:intergenic
GTAAATACCCTTGGAGTTAT+AGG 0.279725 5_2:-44944217 Msa0771750:CDS
TCAGGTTACTTTGCAAGATT+TGG 0.289491 5_2:-44946386 Msa0771750:intron
ACTGATTCGGTACCAAAGTT+TGG 0.290827 5_2:+44947959 None:intergenic
TAGATGATTTATTGGCATTA+GGG 0.300640 5_2:+44944194 None:intergenic
TTAGATGATTTATTGGCATT+AGG 0.307293 5_2:+44944193 None:intergenic
CCTCCATCTCATGTCTTCTA+AGG 0.310088 5_2:-44941964 Msa0771750:three_prime_UTR
GCACGGTCAATTTGAGATAT+TGG 0.320652 5_2:+44944427 None:intergenic
AGATTAGTACCAATATTAAA+AGG 0.321384 5_2:-44944136 Msa0771750:CDS
AACCGGCTTCTTAGAAGCTT+TGG 0.321699 5_2:+44943898 None:intergenic
CGAGTTGGTGGTAGCGAGTT+AGG 0.322220 5_2:+44948306 None:intergenic
TCTTTAGAGCAGACTTGGTT+TGG 0.327651 5_2:+44944322 None:intergenic
GGAGGTGGAAAGGGCGAAGT+TGG 0.334594 5_2:-44942254 Msa0771750:CDS
TATGTAATGGAAAGCTTGAT+TGG 0.335848 5_2:-44942031 Msa0771750:three_prime_UTR
CATTAAATTAATTTACTCAT+TGG 0.342376 5_2:+44941920 None:intergenic
TACAAGCTTGTTTCAGAGTT+AGG 0.344321 5_2:-44942440 Msa0771750:CDS
ATTCAATCTTATCCCTTTAC+CGG 0.349169 5_2:+44948043 None:intergenic
CTGCCTATGATTTGGATCAT+TGG 0.352319 5_2:-44947279 Msa0771750:CDS
CTGATTCGGTACCAAAGTTT+GGG 0.355066 5_2:+44947960 None:intergenic
TATCGTTCTGGATGTCTTGA+TGG 0.362209 5_2:-44944085 Msa0771750:CDS
TGTACTATGCAACTATGAAA+TGG 0.363228 5_2:+44946346 None:intergenic
CACAAAATTACCAAAATAAC+CGG 0.364275 5_2:+44943881 None:intergenic
TTTGGATCATTGGAAGGGTT+TGG 0.364911 5_2:-44947269 Msa0771750:CDS
GTACTATGCAACTATGAAAT+GGG 0.369757 5_2:+44946347 None:intergenic
ACATTGGGAATTACAAATAC+TGG 0.371416 5_2:-44942383 Msa0771750:CDS
AGCCAAACACATTATCGTTC+TGG 0.371977 5_2:-44944097 Msa0771750:CDS
TGGCTCTTTGAGTGATTGTA+AGG 0.376423 5_2:+44948195 None:intergenic
GCTCTTGCTCAGGTTGTGTT+TGG 0.377174 5_2:-44943767 Msa0771750:CDS
TTGGACCAATTGTGCCATAT+TGG 0.378543 5_2:+44944341 None:intergenic
CAAAATTGGAGGGATTATTT+GGG 0.380232 5_2:-44943819 Msa0771750:CDS
AGATTGAATGGCAGTGTTGC+AGG 0.383130 5_2:-44948029 Msa0771750:CDS
CTTCAAGGAGATTCCTTTGA+AGG 0.385860 5_2:-44947355 Msa0771750:CDS
GGTCCAAAGGTCTACGAATT+CGG 0.387773 5_2:-44942578 Msa0771750:CDS
TTTGACGGAAATGAAGTTGT+AGG 0.388452 5_2:+44942529 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5_2:-44947461 Msa0771750:CDS
TCCCTAAATATGTTTATGTT+TGG 0.400093 5_2:+44947460 None:intergenic
AGGAATAATTTGAGTAGCTT+AGG 0.401616 5_2:+44942549 None:intergenic
TAGCCGAATTCGTAGACCTT+TGG 0.407677 5_2:+44942575 None:intergenic
CAAGCCTAGTCTTATTCTAA+TGG 0.410715 5_2:+44944387 None:intergenic
AACCCCACCAACTGTTTCAC+TGG 0.411217 5_2:+44942296 None:intergenic
AATTGTGCCATATTGGAGTT+TGG 0.412583 5_2:+44944348 None:intergenic
GCTGGTTACCCTGGTGAACT+TGG 0.412679 5_2:-44943797 Msa0771750:CDS
ACTCCAAGGGTATTTACTCT+TGG 0.414446 5_2:+44944223 None:intergenic
ATCAAGCTTTCCATTACATA+AGG 0.416068 5_2:+44942034 None:intergenic
AACAGCTGGTGAAGATCCTT+TGG 0.418172 5_2:-44947413 Msa0771750:CDS
AATCCAACCAAACTCCAATA+TGG 0.420174 5_2:-44944355 Msa0771750:CDS
AGGTGGTTATTTGTTGGTTG+TGG 0.420306 5_2:-44942165 Msa0771750:CDS
AAACTCCAATATGGCACAAT+TGG 0.421759 5_2:-44944346 Msa0771750:CDS
GTGTTTGGTGACTATAACCC+AGG 0.425278 5_2:-44943752 Msa0771750:intron
ATAAGACTAGGCTTGTTTGA+TGG 0.425928 5_2:-44944379 Msa0771750:CDS
ATTGTATGTACGTAGGTGAT+TGG 0.426586 5_2:-44947541 Msa0771750:intron
ATCCAGAACGATAATGTGTT+TGG 0.439275 5_2:+44944095 None:intergenic
AAGCCAAAGAAAGGTAGAAA+TGG 0.439382 5_2:-44942323 Msa0771750:CDS
TCCTATGTGAGAGGACTTCA+AGG 0.440841 5_2:-44947370 Msa0771750:CDS
ACAAATACTGGAAGCATGGC+TGG 0.442763 5_2:-44942371 Msa0771750:CDS
CTCATTCTCATGTCTGTCAT+TGG 0.443342 5_2:+44942650 None:intergenic
TCATTTGGGTACCATGTCAT+TGG 0.444807 5_2:+44942686 None:intergenic
TGGTGGAAAGGCTCTTGCTC+AGG 0.448059 5_2:-44943777 Msa0771750:CDS
TTTGAGAGTGTGACGGTGGA+AGG 0.451870 5_2:-44942275 Msa0771750:CDS
TGAAGAAGGTGGTTATTTGT+TGG 0.451987 5_2:-44942171 Msa0771750:CDS
ATGTCAATTTCTGTCACATT+GGG 0.454625 5_2:-44942398 Msa0771750:CDS
ATTATTTGGGCTGGTTACCC+TGG 0.458107 5_2:-44943806 Msa0771750:CDS
ATAAGTTCTTGCTGCTTACC+AGG 0.458334 5_2:+44943932 None:intergenic
CTTCCAATGATCCAAATCAT+AGG 0.458620 5_2:+44947276 None:intergenic
AGTTACTGACCTTACTGATT+CGG 0.462510 5_2:+44947946 None:intergenic
TAAGACTAGGCTTGTTTGAT+GGG 0.462964 5_2:-44944378 Msa0771750:CDS
ACGGTGGAAGGAGGTGGAAA+GGG 0.465934 5_2:-44942263 Msa0771750:CDS
TTAGCAAAAGTAATATCAAC+AGG 0.467973 5_2:+44943851 None:intergenic
TTATTTGTTGGTTGTGGGAG+AGG 0.471909 5_2:-44942159 Msa0771750:CDS
GGTGTTGCTAATGCCGGTAA+AGG 0.474105 5_2:-44948056 Msa0771750:CDS
GCAAGAGGAGTGTACAATGC+TGG 0.474573 5_2:-44947511 Msa0771750:CDS
CATGTCAATTTCTGTCACAT+TGG 0.476854 5_2:-44942399 Msa0771750:CDS
CATATTTAGGGATCCAAGAT+GGG 0.485529 5_2:-44947449 Msa0771750:CDS
GTGTTGCTAATGCCGGTAAA+GGG 0.485722 5_2:-44948055 Msa0771750:CDS
ACATATTTAGGGATCCAAGA+TGG 0.488212 5_2:-44947450 Msa0771750:CDS
AGCAAATGAGAGTGGTGTAA+AGG 0.488408 5_2:-44942198 Msa0771750:CDS
GCCTTTCCACCAAGTTCACC+AGG 0.489811 5_2:+44943788 None:intergenic
GGTGGTTATTTGTTGGTTGT+GGG 0.491601 5_2:-44942164 Msa0771750:CDS
CTATGATTTGGATCATTGGA+AGG 0.493202 5_2:-44947275 Msa0771750:CDS
ACTCTGAAACAAGCTTGTAA+TGG 0.495354 5_2:+44942444 None:intergenic
GAGCCGTGATACGATGTCTT+TGG 0.502639 5_2:+44948175 None:intergenic
TCATCCCACCATTGGTAACT+CGG 0.503578 5_2:+44948089 None:intergenic
GGTTACTTTGCAAGATTTGG+CGG 0.503836 5_2:-44946383 Msa0771750:CDS
GTATCGAATGAGTGGTTGAT+TGG 0.504227 5_2:+44942486 None:intergenic
CTGTTTGTGAAGCCAAAGAA+AGG 0.504938 5_2:-44942332 Msa0771750:CDS
ATGTGACTCTCCTTATGTAA+TGG 0.507201 5_2:-44942044 Msa0771750:three_prime_UTR
TTGGTGGTGTCACAGGAGTA+AGG 0.509360 5_2:+44948254 None:intergenic
AAGAATAATGACAAAATTGG+AGG 0.510297 5_2:-44943830 Msa0771750:CDS
ATGAGAGCTGATCCATCATC+AGG 0.511303 5_2:-44942632 Msa0771750:CDS
GTAGAAACGGTAGGTTCTAC+CGG 0.511605 5_2:+44942604 None:intergenic
CGGTATACCGAGTCGAGGAA+TGG 0.513844 5_2:+44948109 None:intergenic
CAAGGAGATTCCTTTGAAGG+TGG 0.517151 5_2:-44947352 Msa0771750:CDS
GACGGTGGAAGGAGGTGGAA+AGG 0.517159 5_2:-44942264 Msa0771750:CDS
CTACCGGGATAGCCTGATGA+TGG 0.517596 5_2:+44942620 None:intergenic
AGAGATGATTTAGAGTTGCC+TGG 0.517802 5_2:-44943950 Msa0771750:CDS
CTTTGGCATCAAAATCAAAA+CGG 0.518275 5_2:+44947245 None:intergenic
GAAGGTGGAAAACTAATTGG+AGG 0.518493 5_2:-44947337 Msa0771750:CDS
CCCTGGTGAACTTGGTGGAA+AGG 0.520306 5_2:-44943789 Msa0771750:CDS
TGGTTGATTGGTTGATGTGA+AGG 0.520554 5_2:+44942498 None:intergenic
AGGTACATGAGTTGGTGAAT+CGG 0.520809 5_2:+44948277 None:intergenic
ACATCAGCTACAGCATCCTC+TGG 0.521946 5_2:+44945713 None:intergenic
TACAATGCTGGGCAAGCTCA+AGG 0.522288 5_2:-44947499 Msa0771750:CDS
TGCCAAAGCTTCTAAGAAGC+CGG 0.524198 5_2:-44943900 Msa0771750:CDS
CAGCTTCAAGAGCAACGTCT+AGG 0.524868 5_2:+44944296 None:intergenic
AAGTGGGTTGGTGGTGTCAC+AGG 0.526196 5_2:+44948247 None:intergenic
TTATCATGATTATATTATCA+GGG 0.528810 5_2:+44942008 None:intergenic
TGTGCTTACAACCGTGTCAA+TGG 0.530376 5_2:-44946301 Msa0771750:CDS
CTTCCAAGAGTAAATACCCT+TGG 0.531258 5_2:-44944226 Msa0771750:CDS
ATACCGAGTCGAGGAATGGC+AGG 0.534851 5_2:+44948113 None:intergenic
AAGGTCTACGAATTCGGCTA+TGG 0.539382 5_2:-44942572 Msa0771750:CDS
CAAGAGGAGTGTACAATGCT+GGG 0.539499 5_2:-44947510 Msa0771750:CDS
AGGGTATTTACTCTTGGAAG+CGG 0.539975 5_2:+44944229 None:intergenic
CCTTTGGACCTGTGTAGAAA+CGG 0.540578 5_2:+44942591 None:intergenic
CAGCAGTAAGAATAACTTGA+GGG 0.540873 5_2:+44947994 None:intergenic
GATCCATCATCAGGCTATCC+CGG 0.542828 5_2:-44942623 Msa0771750:CDS
GGCTTCACAAACAGCAACAC+AGG 0.545539 5_2:+44942341 None:intergenic
AGAATCATATATGATAATCA+AGG 0.545803 5_2:-44945749 Msa0771750:CDS
TCTTGGAAGCGGGAGAATTG+AGG 0.545957 5_2:+44944240 None:intergenic
GTGCCATATTGGAGTTTGGT+TGG 0.546323 5_2:+44944352 None:intergenic
ATTGGAGGGATTATTTGGGC+TGG 0.549271 5_2:-44943815 Msa0771750:CDS
CAATGTGACAGAAATTGACA+TGG 0.551118 5_2:+44942400 None:intergenic
GAAGACATGAGATGGAGGAT+AGG 0.553501 5_2:+44941969 None:intergenic
GGTTACCCTGGTGAACTTGG+TGG 0.554859 5_2:-44943794 Msa0771750:CDS
GGGTATTTACTCTTGGAAGC+GGG 0.555910 5_2:+44944230 None:intergenic
AGGGATCCAAGATGGGGAAG+AGG 0.555974 5_2:-44947442 Msa0771750:CDS
AATGGTGAATAGATTGTGTA+GGG 0.557476 5_2:+44944405 None:intergenic
GCAACGCTTCATCCCACCAT+TGG 0.558380 5_2:+44948081 None:intergenic
ATCCAGTGAAACAGTTGGTG+GGG 0.558413 5_2:-44942298 Msa0771750:CDS
TTTCATAGTTGCATAGTACA+AGG 0.561138 5_2:-44946343 Msa0771750:CDS
GGTAAAGGGATAAGATTGAA+TGG 0.561290 5_2:-44948041 Msa0771750:CDS
AATATTGGTACTAATCTACA+AGG 0.562148 5_2:+44944142 None:intergenic
GTTGAGATTGCAGAATGGAA+AGG 0.562893 5_2:+44948217 None:intergenic
ACTTTGGTACCGAATCAGTA+AGG 0.574437 5_2:-44947955 Msa0771750:intron
GAGAGTGTGACGGTGGAAGG+AGG 0.575492 5_2:-44942272 Msa0771750:CDS
TAATGGTGAATAGATTGTGT+AGG 0.575658 5_2:+44944404 None:intergenic
AATCCAGTGAAACAGTTGGT+GGG 0.576108 5_2:-44942299 Msa0771750:CDS
TAACCTTAGAAGACATGAGA+TGG 0.577498 5_2:+44941961 None:intergenic
AGTGTGACGGTGGAAGGAGG+TGG 0.578214 5_2:-44942269 Msa0771750:CDS
GGTGGGGTTTGAGAGTGTGA+CGG 0.579282 5_2:-44942282 Msa0771750:CDS
GGTGTAAAGGTGGTTGAAGA+AGG 0.579350 5_2:-44942185 Msa0771750:CDS
AATTACAAATACTGGAAGCA+TGG 0.582605 5_2:-44942375 Msa0771750:CDS
CATCGTATCACGGCTCACAT+TGG 0.582953 5_2:-44948168 Msa0771750:CDS
GGGGTTTGAGAGTGTGACGG+TGG 0.585244 5_2:-44942279 Msa0771750:CDS
TATGATTTGGATCATTGGAA+GGG 0.590213 5_2:-44947274 Msa0771750:CDS
AATCGGCATGAACGAGTTGG+TGG 0.594003 5_2:+44948294 None:intergenic
GTAGCTGATGTACTTCAAGC+TGG 0.594292 5_2:-44945701 Msa0771750:intron
CATTAGGGCCTATAACTCCA+AGG 0.594911 5_2:+44944209 None:intergenic
TACTATGCAACTATGAAATG+GGG 0.595239 5_2:+44946348 None:intergenic
GGAAGAGGACAAGAAACAGC+TGG 0.605215 5_2:-44947427 Msa0771750:CDS
CCGTTTCTACACAGGTCCAA+AGG 0.609130 5_2:-44942591 Msa0771750:CDS
TTGCACGGTGTTGCTAATGC+CGG 0.609925 5_2:-44948062 Msa0771750:CDS
AGAATAATGACAAAATTGGA+GGG 0.611667 5_2:-44943829 Msa0771750:CDS
AGAACCTACCGTTTCTACAC+AGG 0.612051 5_2:-44942599 Msa0771750:CDS
GAGTAAGGAGGTACATGAGT+TGG 0.615620 5_2:+44948269 None:intergenic
AAATCCAGTGAAACAGTTGG+TGG 0.621488 5_2:-44942300 Msa0771750:CDS
GCTCCTGCCATTCCTCGACT+CGG 0.625159 5_2:-44948116 Msa0771750:CDS
TGGACCTGTGTAGAAACGGT+AGG 0.625209 5_2:+44942595 None:intergenic
GCAGCAGTAAGAATAACTTG+AGG 0.626019 5_2:+44947993 None:intergenic
ACAATGCTGGGCAAGCTCAA+GGG 0.626581 5_2:-44947498 Msa0771750:CDS
CCTTAGAAGACATGAGATGG+AGG 0.629228 5_2:+44941964 None:intergenic
AAATGAGAGTGGTGTAAAGG+TGG 0.632245 5_2:-44942195 Msa0771750:CDS
GCTCTTGAAGCTGCAAGAAG+CGG 0.632910 5_2:-44944286 Msa0771750:CDS
TGGAAATCCAGTGAAACAGT+TGG 0.633357 5_2:-44942303 Msa0771750:CDS
GTAAGGTTGAGATTGCAGAA+TGG 0.633745 5_2:+44948212 None:intergenic
TGAATAGATTGTGTAGGGCA+CGG 0.634890 5_2:+44944410 None:intergenic
TATGCTGTTTCCTATGTGAG+AGG 0.634909 5_2:-44947379 Msa0771750:CDS
GGAAAAGTGACCCATGCTGT+GGG 0.635818 5_2:+44948355 None:intergenic
ATTGGATCAAAGTCAAGAGA+GGG 0.636383 5_2:-44943984 Msa0771750:CDS
AATTTGGAACTCCATTGACA+CGG 0.638503 5_2:+44946290 None:intergenic
ATAGTACAAGGACGGTCTAG+TGG 0.639813 5_2:-44946331 Msa0771750:CDS
TCGGTATACCGAGTTACCAA+TGG 0.640416 5_2:-44948097 Msa0771750:CDS
GAGCCAAAGACATCGTATCA+CGG 0.640636 5_2:-44948178 Msa0771750:CDS
TAAAATCAGGTATATTACGT+CGG 0.641041 5_2:-44945786 Msa0771750:intron
GTGATTGGAACGGAAGCAAG+AGG 0.643101 5_2:-44947526 Msa0771750:CDS
GTGAATCGGCATGAACGAGT+TGG 0.643992 5_2:+44948291 None:intergenic
TGGAAAAGTGACCCATGCTG+TGG 0.644059 5_2:+44948354 None:intergenic
ATAGTTGCATAGTACAAGGA+CGG 0.645766 5_2:-44946339 Msa0771750:CDS
TAGAAACGGTAGGTTCTACC+GGG 0.648311 5_2:+44942605 None:intergenic
CTTAGTAGAGCAAATGAGAG+TGG 0.648348 5_2:-44942206 Msa0771750:CDS
GTAAAGGTGGTTGAAGAAGG+TGG 0.656014 5_2:-44942182 Msa0771750:CDS
GATTGGATCAAAGTCAAGAG+AGG 0.658616 5_2:-44943985 Msa0771750:CDS
AAAAGTGACCCATGCTGTGG+GGG 0.658684 5_2:+44948357 None:intergenic
GTATACCGAGTTACCAATGG+TGG 0.659642 5_2:-44948094 Msa0771750:CDS
ATTAGGGCCTATAACTCCAA+GGG 0.662705 5_2:+44944210 None:intergenic
TTGGTACTAATCTACAAGGA+CGG 0.668059 5_2:+44944146 None:intergenic
TTACTTGACAAAGCATGCAA+AGG 0.671287 5_2:-44944473 Msa0771750:CDS
TGGTGGGATGAAGCGTTGCA+CGG 0.676038 5_2:-44948077 Msa0771750:CDS
ATATTTAGGGATCCAAGATG+GGG 0.682736 5_2:-44947448 Msa0771750:CDS
TCCTTGAAGTCCTCTCACAT+AGG 0.685463 5_2:+44947369 None:intergenic
TTCACCATTAGAATAAGACT+AGG 0.688029 5_2:-44944391 Msa0771750:CDS
GAGGGAGACTACCAATGACA+TGG 0.689428 5_2:-44942697 Msa0771750:CDS
TATACCGAGTTACCAATGGT+GGG 0.695458 5_2:-44948093 Msa0771750:CDS
TCAGGGATGGATGTAGAGTG+TGG 0.708529 5_2:-44944499 Msa0771750:intron
TAACTCGGTATACCGAGTCG+AGG 0.711678 5_2:+44948104 None:intergenic
CCTTTCCACCAAGTTCACCA+GGG 0.713430 5_2:+44943789 None:intergenic
ATGTACGTAGGTGATTGGAA+CGG 0.714831 5_2:-44947536 Msa0771750:intron
GTGGTGTCACAGGAGTAAGG+AGG 0.719507 5_2:+44948257 None:intergenic
GAAAAGTGACCCATGCTGTG+GGG 0.726073 5_2:+44948356 None:intergenic
ACTATGCAACTATGAAATGG+GGG 0.744455 5_2:+44946349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTTTTATTTTATAT+TGG - chr5_2:44946934-44946953 Msa0771750:intron 0.0%
!!! TTAATTTTTTATTTTATATT+GGG - chr5_2:44946935-44946954 Msa0771750:intron 0.0%
!! CAAAATTGAAATAATTATAA+GGG + chr5_2:44944147-44944166 None:intergenic 10.0%
!! ACAAAATTGAAATAATTATA+AGG + chr5_2:44944148-44944167 None:intergenic 10.0%
!! ATATTGTTTAATTCTTATAA+GGG + chr5_2:44944301-44944320 None:intergenic 10.0%
!! TATATTGTTTAATTCTTATA+AGG + chr5_2:44944302-44944321 None:intergenic 10.0%
!!! AATATGAGATTTTATTTTTT+TGG - chr5_2:44944694-44944713 Msa0771750:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr5_2:44947168-44947187 Msa0771750:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr5_2:44947169-44947188 Msa0771750:intron 10.0%
!!! TAATCATGATAATATATTTT+TGG - chr5_2:44948324-44948343 Msa0771750:CDS 10.0%
!!! AGTTTAAAGATTTTAGTTTT+TGG - chr5_2:44942471-44942490 Msa0771750:CDS 15.0%
!!! TATTAAATCAACTATTCTTT+TGG + chr5_2:44943585-44943604 None:intergenic 15.0%
!! GAAATTAAAAAATGACAAAT+AGG - chr5_2:44943607-44943626 Msa0771750:intron 15.0%
!!! AAGATGTAAATTTTATAAGA+AGG - chr5_2:44944271-44944290 Msa0771750:CDS 15.0%
!! TATTGTTTAATTCTTATAAG+GGG + chr5_2:44944300-44944319 None:intergenic 15.0%
!!! GATTAATAAGAATGATTTTT+TGG - chr5_2:44944509-44944528 Msa0771750:intron 15.0%
!! AACTAAAATACAAAATGATA+AGG + chr5_2:44945331-44945350 None:intergenic 15.0%
!!! AATAAGTGATTATGTTATTT+TGG - chr5_2:44946307-44946326 Msa0771750:CDS 15.0%
!! ACATAATTTGGTAAAAAAAA+TGG - chr5_2:44946632-44946651 Msa0771750:intron 15.0%
!! AAAATTGTGTCAATTAAATT+GGG + chr5_2:44947133-44947152 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr5_2:44947170-44947189 Msa0771750:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr5_2:44947233-44947252 Msa0771750:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr5_2:44947234-44947253 Msa0771750:intron 15.0%
!!! ATAAGCAATATTTTAAATTG+TGG + chr5_2:44947507-44947526 None:intergenic 15.0%
!! ATTAGTTGAAAAAGTTATTT+GGG + chr5_2:44947575-44947594 None:intergenic 15.0%
!! AATTAGTTGAAAAAGTTATT+TGG + chr5_2:44947576-44947595 None:intergenic 15.0%
!!! AAATAACTTTTTCAACTAAT+TGG - chr5_2:44947575-44947594 Msa0771750:intron 15.0%
!! TTATCATGATTATATTATCA+GGG + chr5_2:44948316-44948335 None:intergenic 15.0%
!! ATTATCATGATTATATTATC+AGG + chr5_2:44948317-44948336 None:intergenic 15.0%
!! ACCAAACATAAACATATTTA+GGG - chr5_2:44942860-44942879 Msa0771750:intron 20.0%
!! AAAAAATGACAAATAGGTAA+TGG - chr5_2:44943613-44943632 Msa0771750:intron 20.0%
!! TGAAAAACATTGTTTCATAA+AGG + chr5_2:44944338-44944357 None:intergenic 20.0%
!! AGAATCATATATGATAATCA+AGG - chr5_2:44944572-44944591 Msa0771750:intron 20.0%
!! GTTAATAGATGTATAAACAA+AGG + chr5_2:44944661-44944680 None:intergenic 20.0%
!! ATTATCTAACTCTATATCAA+TGG - chr5_2:44944732-44944751 Msa0771750:intron 20.0%
!!! CTAATTGAAAGAAAGTTTTT+AGG + chr5_2:44944919-44944938 None:intergenic 20.0%
!! AAAAATAAGTATGAGGTAAA+GGG + chr5_2:44944958-44944977 None:intergenic 20.0%
!!! GTTTTATATGTTTACCTTTT+AGG - chr5_2:44945077-44945096 Msa0771750:intron 20.0%
!! TAATATAATTAGACCTACAT+TGG - chr5_2:44945158-44945177 Msa0771750:intron 20.0%
!! TGAAAGAGATCTTAAAAAAA+AGG - chr5_2:44945201-44945220 Msa0771750:intron 20.0%
!! TTGATCAATCTTAATTATCA+TGG + chr5_2:44945409-44945428 None:intergenic 20.0%
!! AACAACTTTAGATGATTTAT+TGG + chr5_2:44946138-44946157 None:intergenic 20.0%
!!! AAATCATCTAAAGTTGTTTT+AGG - chr5_2:44946140-44946159 Msa0771750:intron 20.0%
!! AGATTAGTACCAATATTAAA+AGG - chr5_2:44946185-44946204 Msa0771750:intron 20.0%
!!! GTGTAAAATCCTTTTAATAT+TGG + chr5_2:44946197-44946216 None:intergenic 20.0%
!!! TGATTATGTTATTTTGGTTA+TGG - chr5_2:44946313-44946332 Msa0771750:CDS 20.0%
!!! GATTATGTTATTTTGGTTAT+GGG - chr5_2:44946314-44946333 Msa0771750:CDS 20.0%
!! ACAGATAAAAACACATAATT+TGG - chr5_2:44946620-44946639 Msa0771750:intron 20.0%
!! TAATATTTAGTTAAGCAAAC+AGG - chr5_2:44946905-44946924 Msa0771750:intron 20.0%
!! AATATTTAGTTAAGCAAACA+GGG - chr5_2:44946906-44946925 Msa0771750:intron 20.0%
!! ATTTAGTTGTGTTTACTAAA+TGG + chr5_2:44947005-44947024 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + chr5_2:44947134-44947153 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr5_2:44947193-44947212 Msa0771750:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr5_2:44947303-44947322 Msa0771750:CDS 20.0%
!!! AGAAAATAGTCTTCATTTTA+TGG + chr5_2:44947403-44947422 None:intergenic 20.0%
!!! GTATTTTGATGAAATCATTT+GGG + chr5_2:44947652-44947671 None:intergenic 20.0%
!!! AATTTTCAATCAAGTAAAGA+TGG - chr5_2:44948232-44948251 Msa0771750:CDS 20.0%
! AAAAATGAAAGTAATGGTGA+TGG + chr5_2:44941990-44942009 None:intergenic 25.0%
! GAAGAGAAAAATGAAAGTAA+TGG + chr5_2:44941996-44942015 None:intergenic 25.0%
! CACCAAACATAAACATATTT+AGG - chr5_2:44942859-44942878 Msa0771750:intron 25.0%
! TCCCTAAATATGTTTATGTT+TGG + chr5_2:44942864-44942883 None:intergenic 25.0%
!!! GCATATTTTGAATTTACCAA+AGG + chr5_2:44942927-44942946 None:intergenic 25.0%
! AGAGAAAAGAAAACTTACTT+TGG + chr5_2:44943096-44943115 None:intergenic 25.0%
!! AGTAAGTTTTCTTTTCTCTA+TGG - chr5_2:44943097-44943116 Msa0771750:intron 25.0%
! TCAACGAAAGTTAATGTATT+TGG - chr5_2:44943301-44943320 Msa0771750:intron 25.0%
!!! TTAACAAAAGTTGATGTATC+TGG + chr5_2:44943340-44943359 None:intergenic 25.0%
! CCTATTTATAAGAGAATGTT+TGG + chr5_2:44943363-44943382 None:intergenic 25.0%
! CCAAACATTCTCTTATAAAT+AGG - chr5_2:44943360-44943379 Msa0771750:intron 25.0%
! AAACGAAACTAAAAGAAATC+AGG + chr5_2:44943415-44943434 None:intergenic 25.0%
! CAATTATCTTTAGTCATGTT+AGG - chr5_2:44943551-44943570 Msa0771750:intron 25.0%
! AAACTAAACAAACAAGAACT+TGG + chr5_2:44943688-44943707 None:intergenic 25.0%
! ACGGATTTGGATTATTTAAA+TGG + chr5_2:44943906-44943925 None:intergenic 25.0%
! AGTAACCTGAATTATTAGAA+CGG + chr5_2:44943925-44943944 None:intergenic 25.0%
! AAATTGTAATCTGCACAATT+TGG + chr5_2:44944050-44944069 None:intergenic 25.0%
! AGACAAAAATGGAATTTCAA+TGG - chr5_2:44944086-44944105 Msa0771750:CDS 25.0%
! GACAAAAATGGAATTTCAAT+GGG - chr5_2:44944087-44944106 Msa0771750:CDS 25.0%
! GCTCTTACAAATTACAAAAT+TGG - chr5_2:44944195-44944214 Msa0771750:CDS 25.0%
!! AATGTTTTTCACTCTATTGA+AGG - chr5_2:44944347-44944366 Msa0771750:CDS 25.0%
! AAATATGTAGCTTCAAAAAG+AGG + chr5_2:44944437-44944456 None:intergenic 25.0%
!! AAAAGTTCACTTTCACATTT+TGG + chr5_2:44944475-44944494 None:intergenic 25.0%
!!! GATTTTTTGGTGTTAAAATC+AGG - chr5_2:44944522-44944541 Msa0771750:intron 25.0%
! TAAAATCAGGTATATTACGT+CGG - chr5_2:44944535-44944554 Msa0771750:intron 25.0%
! GAAAAATAAGTATGAGGTAA+AGG + chr5_2:44944959-44944978 None:intergenic 25.0%
! ATCACGAGAATTAAAAAAGT+TGG - chr5_2:44945023-44945042 Msa0771750:intron 25.0%
! AACTTATTCTCTATCCTAAA+AGG + chr5_2:44945094-44945113 None:intergenic 25.0%
! AAGTATCTATTTACCAATGT+AGG + chr5_2:44945174-44945193 None:intergenic 25.0%
!!! CATTTTAGTTGTTTAAGTTC+TGG - chr5_2:44945285-44945304 Msa0771750:intron 25.0%
!! TCAATGCACTCTAATTTTTA+TGG - chr5_2:44945425-44945444 Msa0771750:intron 25.0%
!! TGTCTTAATTTTACACAATG+TGG - chr5_2:44945458-44945477 Msa0771750:intron 25.0%
!!! ATTTGCCTTAGTTTTAGTTT+AGG - chr5_2:44945516-44945535 Msa0771750:intron 25.0%
! TTTGACCTAAACTAAAACTA+AGG + chr5_2:44945524-44945543 None:intergenic 25.0%
! TTAGTGATTATAGAACTTAG+AGG + chr5_2:44945555-44945574 None:intergenic 25.0%
! TAATAGTACTTGTGTATGTT+TGG + chr5_2:44945765-44945784 None:intergenic 25.0%
! CACAAGTACTATTATAATCA+AGG - chr5_2:44945771-44945790 Msa0771750:CDS 25.0%
!! TTGTGTAATCAAACTTTTCA+GGG - chr5_2:44945805-44945824 Msa0771750:intron 25.0%
! TAGATGATTTATTGGCATTA+GGG + chr5_2:44946130-44946149 None:intergenic 25.0%
! TTAGATGATTTATTGGCATT+AGG + chr5_2:44946131-44946150 None:intergenic 25.0%
! AATATTGGTACTAATCTACA+AGG + chr5_2:44946182-44946201 None:intergenic 25.0%
! CACAAAATTACCAAAATAAC+CGG + chr5_2:44946443-44946462 None:intergenic 25.0%
!!! GTTATTTTGGTAATTTTGTG+TGG - chr5_2:44946443-44946462 Msa0771750:intron 25.0%
! TTAGCAAAAGTAATATCAAC+AGG + chr5_2:44946473-44946492 None:intergenic 25.0%
! GCTAAGAATAATGACAAAAT+TGG - chr5_2:44946488-44946507 Msa0771750:intron 25.0%
! AAGAATAATGACAAAATTGG+AGG - chr5_2:44946491-44946510 Msa0771750:intron 25.0%
! AGAATAATGACAAAATTGGA+GGG - chr5_2:44946492-44946511 Msa0771750:intron 25.0%
!!! TATGTGTTTTTATCTGTCAA+TGG + chr5_2:44946617-44946636 None:intergenic 25.0%
!!! TATACATGTTTTAAGGATCT+TGG + chr5_2:44946845-44946864 None:intergenic 25.0%
!! CGAAGTTTATACATGTTTTA+AGG + chr5_2:44946852-44946871 None:intergenic 25.0%
! ATGTATAAACTTCGTAGATT+TGG - chr5_2:44946858-44946877 Msa0771750:intron 25.0%
!!! TTATTTTATATTGGGAGACA+AGG - chr5_2:44946943-44946962 Msa0771750:intron 25.0%
!! TATTTTATATTGGGAGACAA+GGG - chr5_2:44946944-44946963 Msa0771750:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr5_2:44947192-44947211 Msa0771750:intron 25.0%
!! TTGAAATGTGTCAGTTATTT+TGG - chr5_2:44947280-44947299 Msa0771750:CDS 25.0%
!!! TGAAATGTGTCAGTTATTTT+GGG - chr5_2:44947281-44947300 Msa0771750:CDS 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr5_2:44947302-44947321 Msa0771750:CDS 25.0%
!! GAAGACTATTTTCTATATGA+CGG - chr5_2:44947409-44947428 Msa0771750:CDS 25.0%
!! GGGCATGTATATAATAATTT+TGG + chr5_2:44947555-44947574 None:intergenic 25.0%
!!! GGTATTTTGATGAAATCATT+TGG + chr5_2:44947653-44947672 None:intergenic 25.0%
! ATGGAAAGGATTTTGTAAGT+GGG + chr5_2:44942093-44942112 None:intergenic 30.0%
! AATGGAAAGGATTTTGTAAG+TGG + chr5_2:44942094-44942113 None:intergenic 30.0%
ATTCAATCTTATCCCTTTAC+CGG + chr5_2:44942281-44942300 None:intergenic 30.0%
AGTTAGAGCAAAACTTTGTA+TGG + chr5_2:44942683-44942702 None:intergenic 30.0%
AATTGATCCTCCACAATAAT+TGG - chr5_2:44942733-44942752 Msa0771750:intron 30.0%
AACTCAATGACCAATTATTG+TGG + chr5_2:44942746-44942765 None:intergenic 30.0%
TGATTACATTGTATGTACGT+AGG - chr5_2:44942773-44942792 Msa0771750:intron 30.0%
!!! AATTAGTTTTCCACCTTCAA+AGG + chr5_2:44942982-44943001 None:intergenic 30.0%
TTTGAAGGTGGAAAACTAAT+TGG - chr5_2:44942981-44943000 Msa0771750:intron 30.0%
! ACATTTTACTGCCTATGATT+TGG - chr5_2:44943034-44943053 Msa0771750:intron 30.0%
! TATGATTTGGATCATTGGAA+GGG - chr5_2:44943047-44943066 Msa0771750:intron 30.0%
CTTTGGCATCAAAATCAAAA+CGG + chr5_2:44943079-44943098 None:intergenic 30.0%
ACCAAAATTTCTCTTATACC+GGG + chr5_2:44943282-44943301 None:intergenic 30.0%
GACCAAAATTTCTCTTATAC+CGG + chr5_2:44943283-44943302 None:intergenic 30.0%
CATTCTCTTATAAATAGGAC+CGG - chr5_2:44943365-44943384 Msa0771750:intron 30.0%
TTCATCAACGACATAAAACA+AGG + chr5_2:44943493-44943512 None:intergenic 30.0%
! TTATGTCGTTGATGAATACT+TGG - chr5_2:44943497-44943516 Msa0771750:intron 30.0%
! CTGAATTATTAGAACGGATT+TGG + chr5_2:44943919-44943938 None:intergenic 30.0%
CAAATCCGTTCTAATAATTC+AGG - chr5_2:44943917-44943936 Msa0771750:CDS 30.0%
TACTATGCAACTATGAAATG+GGG + chr5_2:44943976-44943995 None:intergenic 30.0%
GTACTATGCAACTATGAAAT+GGG + chr5_2:44943977-44943996 None:intergenic 30.0%
TGTACTATGCAACTATGAAA+TGG + chr5_2:44943978-44943997 None:intergenic 30.0%
TTTCATAGTTGCATAGTACA+AGG - chr5_2:44943978-44943997 Msa0771750:CDS 30.0%
!! AGTATGCTATTTAACTTGCT+TGG + chr5_2:44944817-44944836 None:intergenic 30.0%
CTTGGTTTAATGTCTATCAT+TGG - chr5_2:44944881-44944900 Msa0771750:intron 30.0%
CTCTCAGAAAAATAAGTATG+AGG + chr5_2:44944965-44944984 None:intergenic 30.0%
!! CTCATACTTATTTTTCTGAG+AGG - chr5_2:44944963-44944982 Msa0771750:intron 30.0%
TGATTTAGTCGATTAGATCT+TGG + chr5_2:44945007-44945026 None:intergenic 30.0%
! GTTGTGTAATCAAACTTTTC+AGG - chr5_2:44945804-44945823 Msa0771750:intron 30.0%
TTCACCATTAGAATAAGACT+AGG - chr5_2:44945930-44945949 Msa0771750:intron 30.0%
!!! GTTGTTTTAGGAAACTACTT+TGG - chr5_2:44946152-44946171 Msa0771750:intron 30.0%
!!! TGTTATTTTGGTTATGGGAT+TGG - chr5_2:44946319-44946338 Msa0771750:CDS 30.0%
!! ATTTTGGTAATTTTGTGTGG+TGG - chr5_2:44946446-44946465 Msa0771750:intron 30.0%
ACAAAATTGGAGGGATTATT+TGG - chr5_2:44946501-44946520 Msa0771750:intron 30.0%
CAAAATTGGAGGGATTATTT+GGG - chr5_2:44946502-44946521 Msa0771750:intron 30.0%
TAAACTGCTCAATCTTTGAT+CGG - chr5_2:44946769-44946788 Msa0771750:intron 30.0%
TGTTTACTAAATGGTTGCAT+GGG + chr5_2:44946996-44947015 None:intergenic 30.0%
! GGTAGTATTTTCTTTGAATC+TGG + chr5_2:44947105-44947124 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG + chr5_2:44947129-44947148 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr5_2:44947177-44947196 Msa0771750:intron 30.0%
! ATAGTGCTGTAAACTTTTTG+TGG - chr5_2:44947525-44947544 Msa0771750:CDS 30.0%
AGGAATAATTTGAGTAGCTT+AGG + chr5_2:44947775-44947794 None:intergenic 30.0%
ATGTCAATTTCTGTCACATT+GGG - chr5_2:44947923-44947942 Msa0771750:intron 30.0%
ACATTGGGAATTACAAATAC+TGG - chr5_2:44947938-44947957 Msa0771750:intron 30.0%
AATTACAAATACTGGAAGCA+TGG - chr5_2:44947946-44947965 Msa0771750:intron 30.0%
TTTCCATTTCTACCTTTCTT+TGG + chr5_2:44948004-44948023 None:intergenic 30.0%
ATCAAGCTTTCCATTACATA+AGG + chr5_2:44948290-44948309 None:intergenic 30.0%
! TATGTAATGGAAAGCTTGAT+TGG - chr5_2:44948290-44948309 Msa0771750:CDS 30.0%
! AAAGGATTTTGTAAGTGGGT+TGG + chr5_2:44942089-44942108 None:intergenic 35.0%
GGTAAAGGGATAAGATTGAA+TGG - chr5_2:44942280-44942299 Msa0771750:CDS 35.0%
CAGCAGTAAGAATAACTTGA+GGG + chr5_2:44942330-44942349 None:intergenic 35.0%
! CTTCTTTTGATCCCAAACTT+TGG - chr5_2:44942350-44942369 Msa0771750:CDS 35.0%
! AGTTACTGACCTTACTGATT+CGG + chr5_2:44942378-44942397 None:intergenic 35.0%
TCAATGACCAATTATTGTGG+AGG + chr5_2:44942743-44942762 None:intergenic 35.0%
ATTGTATGTACGTAGGTGAT+TGG - chr5_2:44942780-44942799 Msa0771750:intron 35.0%
ACATATTTAGGGATCCAAGA+TGG - chr5_2:44942871-44942890 Msa0771750:intron 35.0%
CATATTTAGGGATCCAAGAT+GGG - chr5_2:44942872-44942891 Msa0771750:intron 35.0%
ATATTTAGGGATCCAAGATG+GGG - chr5_2:44942873-44942892 Msa0771750:intron 35.0%
CTTCCAATGATCCAAATCAT+AGG + chr5_2:44943048-44943067 None:intergenic 35.0%
! CTATGATTTGGATCATTGGA+AGG - chr5_2:44943046-44943065 Msa0771750:intron 35.0%
TCTCTATGGTATATAGTCCT+TGG - chr5_2:44943111-44943130 Msa0771750:intron 35.0%
TCCTTGGATGATTAATTCTG+TGG - chr5_2:44943127-44943146 Msa0771750:intron 35.0%
ACCACAGAATTAATCATCCA+AGG + chr5_2:44943131-44943150 None:intergenic 35.0%
CAAAATTTCTCTTATACCGG+GGG + chr5_2:44943280-44943299 None:intergenic 35.0%
CCAAAATTTCTCTTATACCG+GGG + chr5_2:44943281-44943300 None:intergenic 35.0%
AACTAAAAGAAATCAGGCGA+CGG + chr5_2:44943409-44943428 None:intergenic 35.0%
TTGATCAACGGCATAAATCA+AGG + chr5_2:44943761-44943780 None:intergenic 35.0%
!! AAGTTCCAAGCATTGATCAA+CGG + chr5_2:44943773-44943792 None:intergenic 35.0%
AACAATGTCTTACATAGCTC+TGG - chr5_2:44943794-44943813 Msa0771750:CDS 35.0%
! TCAGGTTACTTTGCAAGATT+TGG - chr5_2:44943935-44943954 Msa0771750:CDS 35.0%
ACTATGCAACTATGAAATGG+GGG + chr5_2:44943975-44943994 None:intergenic 35.0%
ATAGTTGCATAGTACAAGGA+CGG - chr5_2:44943982-44944001 Msa0771750:CDS 35.0%
! AATTTGGAACTCCATTGACA+CGG + chr5_2:44944034-44944053 None:intergenic 35.0%
!! CCATTTTTGTCTAGCAGTTT+TGG + chr5_2:44944078-44944097 None:intergenic 35.0%
CCAAAACTGCTAGACAAAAA+TGG - chr5_2:44944075-44944094 Msa0771750:CDS 35.0%
CTAAGTTTCACCAACTAAGT+AGG + chr5_2:44944385-44944404 None:intergenic 35.0%
!! TGAGAAAAGTACCTTCCATT+GGG + chr5_2:44944759-44944778 None:intergenic 35.0%
ATACTCCAAAAATTCACAGC+TGG - chr5_2:44944832-44944851 Msa0771750:intron 35.0%
! TAAGTCCAGCTGTGAATTTT+TGG + chr5_2:44944840-44944859 None:intergenic 35.0%
TTCAACCAACGTATCTATTC+CGG - chr5_2:44945119-44945138 Msa0771750:intron 35.0%
! TTACATCATTTTCTGCAACC+CGG + chr5_2:44945141-44945160 None:intergenic 35.0%
CTCACTATAAGACACAAATG+AGG + chr5_2:44945370-44945389 None:intergenic 35.0%
CTCATTTGTGTCTTATAGTG+AGG - chr5_2:44945368-44945387 Msa0771750:intron 35.0%
!! GTAATCAAACTTTTCAGGGA+TGG - chr5_2:44945809-44945828 Msa0771750:intron 35.0%
TTACTTGACAAAGCATGCAA+AGG - chr5_2:44945848-44945867 Msa0771750:intron 35.0%
!! CAAGCCTAGTCTTATTCTAA+TGG + chr5_2:44945937-44945956 None:intergenic 35.0%
! ATAAGACTAGGCTTGTTTGA+TGG - chr5_2:44945942-44945961 Msa0771750:intron 35.0%
! TAAGACTAGGCTTGTTTGAT+GGG - chr5_2:44945943-44945962 Msa0771750:intron 35.0%
AATCCAACCAAACTCCAATA+TGG - chr5_2:44945966-44945985 Msa0771750:intron 35.0%
AATTGTGCCATATTGGAGTT+TGG + chr5_2:44945976-44945995 None:intergenic 35.0%
AAACTCCAATATGGCACAAT+TGG - chr5_2:44945975-44945994 Msa0771750:intron 35.0%
GTAAATACCCTTGGAGTTAT+AGG - chr5_2:44946104-44946123 Msa0771750:intron 35.0%
TTGGTACTAATCTACAAGGA+CGG + chr5_2:44946178-44946197 None:intergenic 35.0%
ATCCAGAACGATAATGTGTT+TGG + chr5_2:44946229-44946248 None:intergenic 35.0%
! TTTTAGCAACTTCAACTGCT+CGG + chr5_2:44946289-44946308 None:intergenic 35.0%
ATTGGATCAAAGTCAAGAGA+GGG - chr5_2:44946337-44946356 Msa0771750:CDS 35.0%
!! TTCTAAGAAGCCGGTTATTT+TGG - chr5_2:44946430-44946449 Msa0771750:intron 35.0%
GCATAGAAGAAAACTAACCT+GGG + chr5_2:44946589-44946608 None:intergenic 35.0%
AGCATAGAAGAAAACTAACC+TGG + chr5_2:44946590-44946609 None:intergenic 35.0%
AGAGTCTGAAAAATCAGCTT+CGG - chr5_2:44946969-44946988 Msa0771750:intron 35.0%
GTGTTTACTAAATGGTTGCA+TGG + chr5_2:44946997-44947016 None:intergenic 35.0%
CACAACTAAATCTCAGTTAC+TGG - chr5_2:44947014-44947033 Msa0771750:intron 35.0%
TAAATCTCAGTTACTGGATG+CGG - chr5_2:44947020-44947039 Msa0771750:intron 35.0%
AATGAACCTTGAACCAACTA+CGG - chr5_2:44947043-44947062 Msa0771750:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr5_2:44947316-44947335 Msa0771750:CDS 35.0%
TTTGTTAATGACTGCAATGC+AGG - chr5_2:44947602-44947621 Msa0771750:intron 35.0%
TTTGACGGAAATGAAGTTGT+AGG + chr5_2:44947795-44947814 None:intergenic 35.0%
!!! GTGAAGGTTGTTGTTTTTGA+CGG + chr5_2:44947810-44947829 None:intergenic 35.0%
!! ACTCTGAAACAAGCTTGTAA+TGG + chr5_2:44947880-44947899 None:intergenic 35.0%
! TACAAGCTTGTTTCAGAGTT+AGG - chr5_2:44947881-44947900 Msa0771750:intron 35.0%
CAATGTGACAGAAATTGACA+TGG + chr5_2:44947924-44947943 None:intergenic 35.0%
CATGTCAATTTCTGTCACAT+TGG - chr5_2:44947922-44947941 Msa0771750:intron 35.0%
AAGCCAAAGAAAGGTAGAAA+TGG - chr5_2:44947998-44948017 Msa0771750:CDS 35.0%
TGAAGAAGGTGGTTATTTGT+TGG - chr5_2:44948150-44948169 Msa0771750:CDS 35.0%
ATGTGACTCTCCTTATGTAA+TGG - chr5_2:44948277-44948296 Msa0771750:CDS 35.0%
TAACCTTAGAAGACATGAGA+TGG + chr5_2:44948363-44948382 None:intergenic 35.0%
!! AGGTACATGAGTTGGTGAAT+CGG + chr5_2:44942047-44942066 None:intergenic 40.0%
GTTGAGATTGCAGAATGGAA+AGG + chr5_2:44942107-44942126 None:intergenic 40.0%
GTAAGGTTGAGATTGCAGAA+TGG + chr5_2:44942112-44942131 None:intergenic 40.0%
TGGCTCTTTGAGTGATTGTA+AGG + chr5_2:44942129-44942148 None:intergenic 40.0%
TATACCGAGTTACCAATGGT+GGG - chr5_2:44942228-44942247 Msa0771750:CDS 40.0%
GCAGCAGTAAGAATAACTTG+AGG + chr5_2:44942331-44942350 None:intergenic 40.0%
!! CTGATTCGGTACCAAAGTTT+GGG + chr5_2:44942364-44942383 None:intergenic 40.0%
!! ACTGATTCGGTACCAAAGTT+TGG + chr5_2:44942365-44942384 None:intergenic 40.0%
! ACTTTGGTACCGAATCAGTA+AGG - chr5_2:44942366-44942385 Msa0771750:CDS 40.0%
!! CATTAGAAGAGTATCCTCGA+AGG + chr5_2:44942616-44942635 None:intergenic 40.0%
CTTCGAGGATACTCTTCTAA+TGG - chr5_2:44942614-44942633 Msa0771750:CDS 40.0%
GGATACTCTTCTAATGGTCT+CGG - chr5_2:44942620-44942639 Msa0771750:CDS 40.0%
GATACTCTTCTAATGGTCTC+GGG - chr5_2:44942621-44942640 Msa0771750:CDS 40.0%
! CATTTCAGTGTCAGTTTTCG+TGG - chr5_2:44942651-44942670 Msa0771750:CDS 40.0%
AATAGACCTCTTGTTAGCGA+AGG - chr5_2:44942706-44942725 Msa0771750:intron 40.0%
ATAGACCTCTTGTTAGCGAA+GGG - chr5_2:44942707-44942726 Msa0771750:intron 40.0%
ATGTACGTAGGTGATTGGAA+CGG - chr5_2:44942785-44942804 Msa0771750:intron 40.0%
!! TATGCTGTTTCCTATGTGAG+AGG - chr5_2:44942942-44942961 Msa0771750:intron 40.0%
CTTCAAGGAGATTCCTTTGA+AGG - chr5_2:44942966-44942985 Msa0771750:intron 40.0%
GAAGGTGGAAAACTAATTGG+AGG - chr5_2:44942984-44943003 Msa0771750:intron 40.0%
! CTGCCTATGATTTGGATCAT+TGG - chr5_2:44943042-44943061 Msa0771750:intron 40.0%
TTTGGATCATTGGAAGGGTT+TGG - chr5_2:44943052-44943071 Msa0771750:intron 40.0%
GGGAGTGAGCACAAATAAAA+TGG + chr5_2:44943260-44943279 None:intergenic 40.0%
! CCCCGGTATAAGAGAAATTT+TGG - chr5_2:44943278-44943297 Msa0771750:intron 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr5_2:44943368-44943387 Msa0771750:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr5_2:44943369-44943388 Msa0771750:intron 40.0%
TTATGCCGTTGATCAATGCT+TGG - chr5_2:44943765-44943784 Msa0771750:CDS 40.0%
!!! GTCTTACATAGCTCTGGTTT+TGG - chr5_2:44943800-44943819 Msa0771750:CDS 40.0%
! TTTGGATCATGAGGTGGTTT+TGG - chr5_2:44943818-44943837 Msa0771750:CDS 40.0%
!!! GAGGTGGTTTTGGATACATT+TGG - chr5_2:44943828-44943847 Msa0771750:CDS 40.0%
! GGTTACTTTGCAAGATTTGG+CGG - chr5_2:44943938-44943957 Msa0771750:CDS 40.0%
! TCTATTGAAGGTGTGAGCAA+TGG - chr5_2:44944359-44944378 Msa0771750:CDS 40.0%
AGGTTATGCAAAAACACCAG+AGG - chr5_2:44944592-44944611 Msa0771750:intron 40.0%
CTCTATATCAATGGTCCCAA+TGG - chr5_2:44944741-44944760 Msa0771750:intron 40.0%
ATATCAATGGTCCCAATGGA+AGG - chr5_2:44944745-44944764 Msa0771750:intron 40.0%
!! GTGAGAAAAGTACCTTCCAT+TGG + chr5_2:44944760-44944779 None:intergenic 40.0%
!! TATTTAACTTGCTTGGCGTG+GGG + chr5_2:44944810-44944829 None:intergenic 40.0%
!! CTATTTAACTTGCTTGGCGT+GGG + chr5_2:44944811-44944830 None:intergenic 40.0%
TGTGTGTCAAAGACTGTACT+TGG - chr5_2:44944863-44944882 Msa0771750:intron 40.0%
GTCGATTAGATCTTGGTATG+AGG + chr5_2:44945000-44945019 None:intergenic 40.0%
TCAACCAACGTATCTATTCC+GGG - chr5_2:44945120-44945139 Msa0771750:intron 40.0%
TTTAGTTATGCCTTTGCCAG+TGG - chr5_2:44945344-44945363 Msa0771750:intron 40.0%
! GCACGGTCAATTTGAGATAT+TGG + chr5_2:44945897-44945916 None:intergenic 40.0%
TTGGACCAATTGTGCCATAT+TGG + chr5_2:44945983-44946002 None:intergenic 40.0%
!! TCTTTAGAGCAGACTTGGTT+TGG + chr5_2:44946002-44946021 None:intergenic 40.0%
!!! GGTTTTCTTTAGAGCAGACT+TGG + chr5_2:44946007-44946026 None:intergenic 40.0%
! AGGGTATTTACTCTTGGAAG+CGG + chr5_2:44946095-44946114 None:intergenic 40.0%
CTTCCAAGAGTAAATACCCT+TGG - chr5_2:44946095-44946114 Msa0771750:intron 40.0%
!! ACTCCAAGGGTATTTACTCT+TGG + chr5_2:44946101-44946120 None:intergenic 40.0%
ATTAGGGCCTATAACTCCAA+GGG + chr5_2:44946114-44946133 None:intergenic 40.0%
AGCCAAACACATTATCGTTC+TGG - chr5_2:44946224-44946243 Msa0771750:intron 40.0%
! TATCGTTCTGGATGTCTTGA+TGG - chr5_2:44946236-44946255 Msa0771750:CDS 40.0%
GATTGGATCAAAGTCAAGAG+AGG - chr5_2:44946336-44946355 Msa0771750:CDS 40.0%
! AGAGATGATTTAGAGTTGCC+TGG - chr5_2:44946371-44946390 Msa0771750:CDS 40.0%
! ATAAGTTCTTGCTGCTTACC+AGG + chr5_2:44946392-44946411 None:intergenic 40.0%
GTCAGGTAACATCTGAAGAT+TGG - chr5_2:44946686-44946705 Msa0771750:intron 40.0%
AACTGCATGCAATGTAGTTG+TGG - chr5_2:44946809-44946828 Msa0771750:intron 40.0%
! AAATCTCCGTAGTTGGTTCA+AGG + chr5_2:44947052-44947071 None:intergenic 40.0%
TTGAACCAACTACGGAGATT+TGG - chr5_2:44947051-44947070 Msa0771750:intron 40.0%
ATTTGGCTGAACTGACTAGA+TGG - chr5_2:44947068-44947087 Msa0771750:intron 40.0%
TGTCAATTAAATTGGGACGG+AGG + chr5_2:44947126-44947145 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr5_2:44947317-44947336 Msa0771750:CDS 40.0%
!! GGGAGTACTCTTTATGTTCA+TGG - chr5_2:44947345-44947364 Msa0771750:CDS 40.0%
TTAATGACTGCAATGCAGGA+GGG - chr5_2:44947606-44947625 Msa0771750:intron 40.0%
TCATTTGGGTACCATGTCAT+TGG + chr5_2:44947638-44947657 None:intergenic 40.0%
CTCATTCTCATGTCTGTCAT+TGG + chr5_2:44947674-44947693 None:intergenic 40.0%
! TGGTTGATTGGTTGATGTGA+AGG + chr5_2:44947826-44947845 None:intergenic 40.0%
GTATCGAATGAGTGGTTGAT+TGG + chr5_2:44947838-44947857 None:intergenic 40.0%
!!! GTTTTCGAGTATCGAATGAG+TGG + chr5_2:44947846-44947865 None:intergenic 40.0%
CTGTTTGTGAAGCCAAAGAA+AGG - chr5_2:44947989-44948008 Msa0771750:CDS 40.0%
TGGAAATCCAGTGAAACAGT+TGG - chr5_2:44948018-44948037 Msa0771750:CDS 40.0%
AAATCCAGTGAAACAGTTGG+TGG - chr5_2:44948021-44948040 Msa0771750:CDS 40.0%
AATCCAGTGAAACAGTTGGT+GGG - chr5_2:44948022-44948041 Msa0771750:CDS 40.0%
CTTAGTAGAGCAAATGAGAG+TGG - chr5_2:44948115-44948134 Msa0771750:CDS 40.0%
AGCAAATGAGAGTGGTGTAA+AGG - chr5_2:44948123-44948142 Msa0771750:CDS 40.0%
AAATGAGAGTGGTGTAAAGG+TGG - chr5_2:44948126-44948145 Msa0771750:CDS 40.0%
! AGGTGGTTATTTGTTGGTTG+TGG - chr5_2:44948156-44948175 Msa0771750:CDS 40.0%
! GGTGGTTATTTGTTGGTTGT+GGG - chr5_2:44948157-44948176 Msa0771750:CDS 40.0%
! TTATTTGTTGGTTGTGGGAG+AGG - chr5_2:44948162-44948181 Msa0771750:CDS 40.0%
! GAGTAAGGAGGTACATGAGT+TGG + chr5_2:44942055-44942074 None:intergenic 45.0%
!!! GGATTTTGTAAGTGGGTTGG+TGG + chr5_2:44942086-44942105 None:intergenic 45.0%
GAGCCAAAGACATCGTATCA+CGG - chr5_2:44942143-44942162 Msa0771750:CDS 45.0%
TCGGTATACCGAGTTACCAA+TGG - chr5_2:44942224-44942243 Msa0771750:CDS 45.0%
GTATACCGAGTTACCAATGG+TGG - chr5_2:44942227-44942246 Msa0771750:CDS 45.0%
! TCATCCCACCATTGGTAACT+CGG + chr5_2:44942235-44942254 None:intergenic 45.0%
! GTGTTGCTAATGCCGGTAAA+GGG - chr5_2:44942266-44942285 Msa0771750:CDS 45.0%
AGATTGAATGGCAGTGTTGC+AGG - chr5_2:44942292-44942311 Msa0771750:CDS 45.0%
! CAAGAGGAGTGTACAATGCT+GGG - chr5_2:44942811-44942830 Msa0771750:intron 45.0%
! AAGCTCAAGGGATGACGTTT+TGG - chr5_2:44942835-44942854 Msa0771750:intron 45.0%
! AGCTCAAGGGATGACGTTTT+GGG - chr5_2:44942836-44942855 Msa0771750:intron 45.0%
AACAGCTGGTGAAGATCCTT+TGG - chr5_2:44942908-44942927 Msa0771750:intron 45.0%
TCCTATGTGAGAGGACTTCA+AGG - chr5_2:44942951-44942970 Msa0771750:intron 45.0%
TCCTTGAAGTCCTCTCACAT+AGG + chr5_2:44942955-44942974 None:intergenic 45.0%
! CAAGGAGATTCCTTTGAAGG+TGG - chr5_2:44942969-44942988 Msa0771750:intron 45.0%
TTTATTTGTGCTCACTCCCC+CGG - chr5_2:44943261-44943280 Msa0771750:intron 45.0%
GCTTTGTCTAATACTCCCTC+CGG + chr5_2:44943387-44943406 None:intergenic 45.0%
!!! AGCTCTGGTTTTGGATCATG+AGG - chr5_2:44943809-44943828 Msa0771750:CDS 45.0%
!!! TCTGGTTTTGGATCATGAGG+TGG - chr5_2:44943812-44943831 Msa0771750:CDS 45.0%
ATAGTACAAGGACGGTCTAG+TGG - chr5_2:44943990-44944009 Msa0771750:CDS 45.0%
TGTGCTTACAACCGTGTCAA+TGG - chr5_2:44944020-44944039 Msa0771750:CDS 45.0%
TGAGCAATGGCCTACTTAGT+TGG - chr5_2:44944372-44944391 Msa0771750:CDS 45.0%
GTAGCTGATGTACTTCAAGC+TGG - chr5_2:44944620-44944639 Msa0771750:intron 45.0%
TTGGCGTGGGGAATATATGT+GGG + chr5_2:44944798-44944817 None:intergenic 45.0%
!! GCTATTTAACTTGCTTGGCG+TGG + chr5_2:44944812-44944831 None:intergenic 45.0%
TAAGACACAAATGAGGCCAC+TGG + chr5_2:44945363-44945382 None:intergenic 45.0%
GTGCCATATTGGAGTTTGGT+TGG + chr5_2:44945972-44945991 None:intergenic 45.0%
GGGTATTTACTCTTGGAAGC+GGG + chr5_2:44946094-44946113 None:intergenic 45.0%
CATTAGGGCCTATAACTCCA+AGG + chr5_2:44946115-44946134 None:intergenic 45.0%
! TGCCAAAGCTTCTAAGAAGC+CGG - chr5_2:44946421-44946440 Msa0771750:intron 45.0%
! AACCGGCTTCTTAGAAGCTT+TGG + chr5_2:44946426-44946445 None:intergenic 45.0%
ATTGGAGGGATTATTTGGGC+TGG - chr5_2:44946506-44946525 Msa0771750:intron 45.0%
!! ATTATTTGGGCTGGTTACCC+TGG - chr5_2:44946515-44946534 Msa0771750:intron 45.0%
! GTGTTTGGTGACTATAACCC+AGG - chr5_2:44946569-44946588 Msa0771750:intron 45.0%
CTGCTCAATCTTTGATCGGA+TGG - chr5_2:44946773-44946792 Msa0771750:intron 45.0%
TTCAGCCAAATCTCCGTAGT+TGG + chr5_2:44947059-44947078 None:intergenic 45.0%
AACTGACTAGATGGTAGCAG+AGG - chr5_2:44947077-44947096 Msa0771750:intron 45.0%
GTTAATGACTGCAATGCAGG+AGG - chr5_2:44947605-44947624 Msa0771750:intron 45.0%
ATGAGAGCTGATCCATCATC+AGG - chr5_2:44947689-44947708 Msa0771750:intron 45.0%
TAGAAACGGTAGGTTCTACC+GGG + chr5_2:44947719-44947738 None:intergenic 45.0%
GTAGAAACGGTAGGTTCTAC+CGG + chr5_2:44947720-44947739 None:intergenic 45.0%
AGAACCTACCGTTTCTACAC+AGG - chr5_2:44947722-44947741 Msa0771750:intron 45.0%
CCTTTGGACCTGTGTAGAAA+CGG + chr5_2:44947733-44947752 None:intergenic 45.0%
GGTCCAAAGGTCTACGAATT+CGG - chr5_2:44947743-44947762 Msa0771750:intron 45.0%
TAGCCGAATTCGTAGACCTT+TGG + chr5_2:44947749-44947768 None:intergenic 45.0%
AAGGTCTACGAATTCGGCTA+TGG - chr5_2:44947749-44947768 Msa0771750:intron 45.0%
! ACAAATACTGGAAGCATGGC+TGG - chr5_2:44947950-44947969 Msa0771750:intron 45.0%
! ATCCAGTGAAACAGTTGGTG+GGG - chr5_2:44948023-44948042 Msa0771750:CDS 45.0%
GGTGTAAAGGTGGTTGAAGA+AGG - chr5_2:44948136-44948155 Msa0771750:CDS 45.0%
GTAAAGGTGGTTGAAGAAGG+TGG - chr5_2:44948139-44948158 Msa0771750:CDS 45.0%
GAAGACATGAGATGGAGGAT+AGG + chr5_2:44948355-44948374 None:intergenic 45.0%
CCTTAGAAGACATGAGATGG+AGG + chr5_2:44948360-44948379 None:intergenic 45.0%
CCTCCATCTCATGTCTTCTA+AGG - chr5_2:44948357-44948376 Msa0771750:exon 45.0%
CTGTGGGGGATGTATGTAAC+AGG + chr5_2:44941953-44941972 None:intergenic 50.0%
TACATACATCCCCCACAGCA+TGG - chr5_2:44941955-44941974 Msa0771750:three_prime_UTR 50.0%
ACATACATCCCCCACAGCAT+GGG - chr5_2:44941956-44941975 Msa0771750:three_prime_UTR 50.0%
AAAAGTGACCCATGCTGTGG+GGG + chr5_2:44941967-44941986 None:intergenic 50.0%
GAAAAGTGACCCATGCTGTG+GGG + chr5_2:44941968-44941987 None:intergenic 50.0%
GGAAAAGTGACCCATGCTGT+GGG + chr5_2:44941969-44941988 None:intergenic 50.0%
TGGAAAAGTGACCCATGCTG+TGG + chr5_2:44941970-44941989 None:intergenic 50.0%
! AATCGGCATGAACGAGTTGG+TGG + chr5_2:44942030-44942049 None:intergenic 50.0%
GTGAATCGGCATGAACGAGT+TGG + chr5_2:44942033-44942052 None:intergenic 50.0%
!! TTGGTGGTGTCACAGGAGTA+AGG + chr5_2:44942070-44942089 None:intergenic 50.0%
GAGCCGTGATACGATGTCTT+TGG + chr5_2:44942149-44942168 None:intergenic 50.0%
CATCGTATCACGGCTCACAT+TGG - chr5_2:44942153-44942172 Msa0771750:CDS 50.0%
TAACTCGGTATACCGAGTCG+AGG + chr5_2:44942220-44942239 None:intergenic 50.0%
!! TTGCACGGTGTTGCTAATGC+CGG - chr5_2:44942259-44942278 Msa0771750:CDS 50.0%
!! GGTGTTGCTAATGCCGGTAA+AGG - chr5_2:44942265-44942284 Msa0771750:CDS 50.0%
CTTCAGATGAGTTCGTCGTG+TGG - chr5_2:44942577-44942596 Msa0771750:CDS 50.0%
ATGAGTTCGTCGTGTGGTGT+AGG - chr5_2:44942583-44942602 Msa0771750:CDS 50.0%
TTCCACCCTTCGCTAACAAG+AGG + chr5_2:44942715-44942734 None:intergenic 50.0%
GTGATTGGAACGGAAGCAAG+AGG - chr5_2:44942795-44942814 Msa0771750:intron 50.0%
! GCAAGAGGAGTGTACAATGC+TGG - chr5_2:44942810-44942829 Msa0771750:intron 50.0%
TACAATGCTGGGCAAGCTCA+AGG - chr5_2:44942822-44942841 Msa0771750:intron 50.0%
ACAATGCTGGGCAAGCTCAA+GGG - chr5_2:44942823-44942842 Msa0771750:intron 50.0%
TCTTGTCCTCTTCCCCATCT+TGG + chr5_2:44942888-44942907 None:intergenic 50.0%
GGAAGAGGACAAGAAACAGC+TGG - chr5_2:44942894-44942913 Msa0771750:intron 50.0%
ACATCAGCTACAGCATCCTC+TGG + chr5_2:44944611-44944630 None:intergenic 50.0%
TGGCGTGGGGAATATATGTG+GGG + chr5_2:44944797-44944816 None:intergenic 50.0%
CTTGGCGTGGGGAATATATG+TGG + chr5_2:44944799-44944818 None:intergenic 50.0%
GCAACCCGGAATAGATACGT+TGG + chr5_2:44945127-44945146 None:intergenic 50.0%
ACAAATGAGGCCACTGGCAA+AGG + chr5_2:44945357-44945376 None:intergenic 50.0%
TCAGGGATGGATGTAGAGTG+TGG - chr5_2:44945822-44945841 Msa0771750:intron 50.0%
CAGCTTCAAGAGCAACGTCT+AGG + chr5_2:44946028-44946047 None:intergenic 50.0%
GCTCTTGAAGCTGCAAGAAG+CGG - chr5_2:44946035-44946054 Msa0771750:intron 50.0%
TCTTGGAAGCGGGAGAATTG+AGG + chr5_2:44946084-44946103 None:intergenic 50.0%
CCTTTCCACCAAGTTCACCA+GGG + chr5_2:44946535-44946554 None:intergenic 50.0%
! GCTCTTGCTCAGGTTGTGTT+TGG - chr5_2:44946554-44946573 Msa0771750:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr5_2:44947321-44947340 Msa0771750:CDS 50.0%
GAGGGAGACTACCAATGACA+TGG - chr5_2:44947624-44947643 Msa0771750:intron 50.0%
GATCCATCATCAGGCTATCC+CGG - chr5_2:44947698-44947717 Msa0771750:intron 50.0%
TGGACCTGTGTAGAAACGGT+AGG + chr5_2:44947729-44947748 None:intergenic 50.0%
CCGTTTCTACACAGGTCCAA+AGG - chr5_2:44947730-44947749 Msa0771750:intron 50.0%
GGCTTCACAAACAGCAACAC+AGG + chr5_2:44947983-44948002 None:intergenic 50.0%
AACCCCACCAACTGTTTCAC+TGG + chr5_2:44948028-44948047 None:intergenic 50.0%
! TTTGAGAGTGTGACGGTGGA+AGG - chr5_2:44948046-44948065 Msa0771750:CDS 50.0%
!! CGAGTTGGTGGTAGCGAGTT+AGG + chr5_2:44942018-44942037 None:intergenic 55.0%
!! GTGGTGTCACAGGAGTAAGG+AGG + chr5_2:44942067-44942086 None:intergenic 55.0%
!! AAGTGGGTTGGTGGTGTCAC+AGG + chr5_2:44942077-44942096 None:intergenic 55.0%
ATACCGAGTCGAGGAATGGC+AGG + chr5_2:44942211-44942230 None:intergenic 55.0%
CGGTATACCGAGTCGAGGAA+TGG + chr5_2:44942215-44942234 None:intergenic 55.0%
GCAACGCTTCATCCCACCAT+TGG + chr5_2:44942243-44942262 None:intergenic 55.0%
!! TGGTGGGATGAAGCGTTGCA+CGG - chr5_2:44942244-44942263 Msa0771750:CDS 55.0%
GTGTAGGCTTGAGACCTTCG+AGG - chr5_2:44942599-44942618 Msa0771750:CDS 55.0%
GACCTCTTGTTAGCGAAGGG+TGG - chr5_2:44942710-44942729 Msa0771750:intron 55.0%
AGGGATCCAAGATGGGGAAG+AGG - chr5_2:44942879-44942898 Msa0771750:intron 55.0%
GCTGGTTACCCTGGTGAACT+TGG - chr5_2:44946524-44946543 Msa0771750:intron 55.0%
GGTTACCCTGGTGAACTTGG+TGG - chr5_2:44946527-44946546 Msa0771750:intron 55.0%
! CCCTGGTGAACTTGGTGGAA+AGG - chr5_2:44946532-44946551 Msa0771750:intron 55.0%
GCCTTTCCACCAAGTTCACC+AGG + chr5_2:44946536-44946555 None:intergenic 55.0%
TGGTGGAAAGGCTCTTGCTC+AGG - chr5_2:44946544-44946563 Msa0771750:intron 55.0%
! CAGTGTTACTGCACGCAGTC+AGG - chr5_2:44946669-44946688 Msa0771750:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr5_2:44947325-44947344 Msa0771750:CDS 55.0%
!! AAAGAGTACTCCCTCCGTCC+CGG + chr5_2:44947338-44947357 None:intergenic 55.0%
CTACCGGGATAGCCTGATGA+TGG + chr5_2:44947704-44947723 None:intergenic 55.0%
! GGTGGGGTTTGAGAGTGTGA+CGG - chr5_2:44948039-44948058 Msa0771750:CDS 55.0%
ACGGTGGAAGGAGGTGGAAA+GGG - chr5_2:44948058-44948077 Msa0771750:CDS 55.0%
GCTCCTGCCATTCCTCGACT+CGG - chr5_2:44942205-44942224 Msa0771750:CDS 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr5_2:44947324-44947343 Msa0771750:CDS 60.0%
! GGGGTTTGAGAGTGTGACGG+TGG - chr5_2:44948042-44948061 Msa0771750:CDS 60.0%
! GAGAGTGTGACGGTGGAAGG+AGG - chr5_2:44948049-44948068 Msa0771750:CDS 60.0%
AGTGTGACGGTGGAAGGAGG+TGG - chr5_2:44948052-44948071 Msa0771750:CDS 60.0%
GACGGTGGAAGGAGGTGGAA+AGG - chr5_2:44948057-44948076 Msa0771750:CDS 60.0%
GGAGGTGGAAAGGGCGAAGT+TGG - chr5_2:44948067-44948086 Msa0771750:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 44941924 44948419 44941924 ID=Msa0771750;Name=Msa0771750
chr5_2 mRNA 44941924 44948419 44941924 ID=Msa0771750-mRNA-1;Parent=Msa0771750;Name=Msa0771750-mRNA-1;_AED=0.03;_eAED=0.03;_QI=50|1|1|1|1|1|6|206|779
chr5_2 exon 44941924 44942719 44941924 ID=Msa0771750-mRNA-1:exon:13635;Parent=Msa0771750-mRNA-1
chr5_2 exon 44943753 44944517 44943753 ID=Msa0771750-mRNA-1:exon:13634;Parent=Msa0771750-mRNA-1
chr5_2 exon 44945702 44945799 44945702 ID=Msa0771750-mRNA-1:exon:13633;Parent=Msa0771750-mRNA-1
chr5_2 exon 44946235 44946404 44946235 ID=Msa0771750-mRNA-1:exon:13632;Parent=Msa0771750-mRNA-1
chr5_2 exon 44947246 44947548 44947246 ID=Msa0771750-mRNA-1:exon:13631;Parent=Msa0771750-mRNA-1
chr5_2 exon 44947956 44948419 44947956 ID=Msa0771750-mRNA-1:exon:13630;Parent=Msa0771750-mRNA-1
chr5_2 five_prime_UTR 44948370 44948419 44948370 ID=Msa0771750-mRNA-1:five_prime_utr;Parent=Msa0771750-mRNA-1
chr5_2 CDS 44947956 44948369 44947956 ID=Msa0771750-mRNA-1:cds;Parent=Msa0771750-mRNA-1
chr5_2 CDS 44947246 44947548 44947246 ID=Msa0771750-mRNA-1:cds;Parent=Msa0771750-mRNA-1
chr5_2 CDS 44946235 44946404 44946235 ID=Msa0771750-mRNA-1:cds;Parent=Msa0771750-mRNA-1
chr5_2 CDS 44945702 44945799 44945702 ID=Msa0771750-mRNA-1:cds;Parent=Msa0771750-mRNA-1
chr5_2 CDS 44943753 44944517 44943753 ID=Msa0771750-mRNA-1:cds;Parent=Msa0771750-mRNA-1
chr5_2 CDS 44942130 44942719 44942130 ID=Msa0771750-mRNA-1:cds;Parent=Msa0771750-mRNA-1
chr5_2 three_prime_UTR 44941924 44942129 44941924 ID=Msa0771750-mRNA-1:three_prime_utr;Parent=Msa0771750-mRNA-1
Gene Sequence

>Msa0771750

ATGGGTCACTTTTCCATCACCATTACTTTCATTTTTCTCTTCCTAACTCGCTACCACCAACTCGTTCATGCCGATTCACCAACTCATGTACCTCCTTACTCCTGTGACACCACCAACCCACTTACAAAATCCTTTCCATTCTGCAATCTCAACCTTACAATCACTCAAAGAGCCAAAGACATCGTATCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGGTATACCGAGTTACCAATGGTGGGATGAAGCGTTGCACGGTGTTGCTAATGCCGGTAAAGGGATAAGATTGAATGGCAGTGTTGCAGGTGCTACTAGTTTCCCTCAAGTTATTCTTACTGCTGCTTCTTTTGATCCCAAACTTTGGTACCGAATCAGTAAGGTGATTGGAACGGAAGCAAGAGGAGTGTACAATGCTGGGCAAGCTCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGATCCAAGATGGGGAAGAGGACAAGAAACAGCTGGTGAAGATCCTTTGGTAAATTCAAAATATGCTGTTTCCTATGTGAGAGGACTTCAAGGAGATTCCTTTGAAGGTGGAAAACTAATTGGAGGTCGTCTTAAAGCTTCTGCTTGTTGCAAACATTTTACTGCCTATGATTTGGATCATTGGAAGGGTTTGGACCGTTTTGATTTTGATGCCAAAGTTACTTTGCAAGATTTGGCGGATACGTATCAACCCCCATTTCATAGTTGCATAGTACAAGGACGGTCTAGTGGAATAATGTGTGCTTACAACCGTGTCAATGGAGTTCCAAATTGTGCAGATTACAATTTGTTAACCAAAACTGCTAGACAAAAATGGAATTTCAATGGGTATATTACGTCGGATTGTGAAGCAGTAAGAATCATATATGATAATCAAGGTTATGCAAAAACACCAGAGGATGCTGTAGCTGATGTACTTCAAGCTGGGATGGATGTAGAGTGTGGTGATTACTTGACAAAGCATGCAAAGGCAGCAGTACTACAAAAAAAAGTACCAATATCTCAAATTGACCGTGCCCTACACAATCTATTCACCATTAGAATAAGACTAGGCTTGTTTGATGGGAATCCAACCAAACTCCAATATGGCACAATTGGTCCAAACCAAGTCTGCTCTAAAGAAAACCTAGACGTTGCTCTTGAAGCTGCAAGAAGCGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCGCTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCTAAAGTTGTTTTAGGAAACTACTTTGGCCGTCCTTGTAGATTAGTACCAATATTAAAAGGATTTTACACTTATGCTAGCCAAACACATTATCGTTCTGGATGTCTTGATGGAACAAAGTGTGCTTCAGCTGAAATCGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGATCAAAGTCAAGAGAGGGAATCACGCGATAGAGATGATTTAGAGTTGCCTGGTAAGCAGCAAGAACTTATTAATAGTGTTGCCAAAGCTTCTAAGAAGCCGGTTATTTTGGTAATTTTGTGTGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGGATTATTTGGGCTGGTTACCCTGGTGAACTTGGTGGAAAGGCTCTTGCTCAGGTTGTGTTTGGTGACTATAACCCAGGAGGGAGACTACCAATGACATGGTACCCAAATGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCATCATCAGGCTATCCCGGTAGAACCTACCGTTTCTACACAGGTCCAAAGGTCTACGAATTCGGCTATGGCCTAAGCTACTCAAATTATTCCTACAACTTCATTTCCGTCAAAAACAACAACCTTCACATCAACCAATCAACCACTCATTCGATACTCGAAAACTCTGAAACAATCCATTACAAGCTTGTTTCAGAGTTAGGCGAAGAAACATGTCAAACCATGTCAATTTCTGTCACATTGGGAATTACAAATACTGGAAGCATGGCTGGAAAACATCCTGTGTTGCTGTTTGTGAAGCCAAAGAAAGGTAGAAATGGAAATCCAGTGAAACAGTTGGTGGGGTTTGAGAGTGTGACGGTGGAAGGAGGTGGAAAGGGCGAAGTTGGATTTGAAGTTAGTGTTTGTGAGCATCTTAGTAGAGCAAATGAGAGTGGTGTAAAGGTGGTTGAAGAAGGTGGTTATTTGTTGGTTGTGGGAGAGGAAGAGTACTCAATAAGTATCACTGTTTAA
Protein sequence

>Msa0771750

MGHFSITITFIFLFLTRYHQLVHADSPTHVPPYSCDTTNPLTKSFPFCNLNLTITQRAKDIVSRLTLDEKISQLVNTAPAIPRLGIPSYQWWDEALHGVANAGKGIRLNGSVAGATSFPQVILTAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYAVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLDHWKGLDRFDFDAKVTLQDLADTYQPPFHSCIVQGRSSGIMCAYNRVNGVPNCADYNLLTKTARQKWNFNGYITSDCEAVRIIYDNQGYAKTPEDAVADVLQAGMDVECGDYLTKHAKAAVLQKKVPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGTIGPNQVCSKENLDVALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSKVVLGNYFGRPCRLVPILKGFYTYASQTHYRSGCLDGTKCASAEIDRAVEVAKISDYVILVMGLDQSQERESRDRDDLELPGKQQELINSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGELGGKALAQVVFGDYNPGGRLPMTWYPNDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNFISVKNNNLHINQSTTHSILENSETIHYKLVSELGEETCQTMSISVTLGITNTGSMAGKHPVLLFVKPKKGRNGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVVEEGGYLLVVGEEEYSISITV*