Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772310 | sp|Q8GW96|AATP3_ARATH | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 1.41e-133 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772310 | G7KF10 | 95.248 | 484 | 18 | 2 | 1 | 483 | 3 | 482 | 0.0 | 945 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0772310 | Msa1407900 | 0.821377 | 4.171586e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772310 | MtrunA17_Chr5g0404661 | 95.248 | 484 | 18 | 2 | 1 | 483 | 3 | 482 | 0.0 | 945 |
| Msa0772310 | MtrunA17_Chr3g0134831 | 79.522 | 293 | 57 | 2 | 182 | 472 | 1 | 292 | 6.44e-172 | 485 |
| Msa0772310 | MtrunA17_Chr5g0404651 | 40.764 | 471 | 241 | 8 | 18 | 473 | 9 | 456 | 7.37e-124 | 370 |
| Msa0772310 | MtrunA17_Chr8g0372701 | 41.075 | 465 | 235 | 6 | 14 | 466 | 15 | 452 | 7.84e-122 | 365 |
| Msa0772310 | MtrunA17_Chr2g0315911 | 41.957 | 460 | 227 | 8 | 33 | 484 | 21 | 448 | 1.09e-116 | 350 |
| Msa0772310 | MtrunA17_Chr2g0315921 | 41.573 | 445 | 225 | 8 | 33 | 467 | 19 | 438 | 4.52e-113 | 341 |
| Msa0772310 | MtrunA17_Chr2g0315981 | 41.667 | 456 | 234 | 8 | 33 | 479 | 14 | 446 | 6.23e-113 | 341 |
| Msa0772310 | MtrunA17_Chr2g0315991 | 41.593 | 452 | 229 | 8 | 33 | 479 | 20 | 441 | 1.28e-112 | 341 |
| Msa0772310 | MtrunA17_Chr2g0315971 | 41.447 | 456 | 232 | 7 | 33 | 481 | 14 | 441 | 1.22e-111 | 346 |
| Msa0772310 | MtrunA17_Chr2g0315971 | 51.095 | 274 | 119 | 3 | 196 | 467 | 443 | 703 | 6.79e-83 | 271 |
| Msa0772310 | MtrunA17_Chr2g0316041 | 41.809 | 409 | 205 | 6 | 80 | 479 | 2 | 386 | 7.77e-101 | 309 |
| Msa0772310 | MtrunA17_Chr1g0155131 | 38.780 | 459 | 253 | 8 | 23 | 467 | 7 | 451 | 7.05e-98 | 303 |
| Msa0772310 | MtrunA17_Chr2g0316021 | 37.744 | 461 | 216 | 8 | 33 | 484 | 14 | 412 | 5.46e-97 | 299 |
| Msa0772310 | MtrunA17_Chr2g0292561 | 38.106 | 454 | 258 | 8 | 23 | 467 | 10 | 449 | 8.58e-97 | 300 |
| Msa0772310 | MtrunA17_Chr6g0452451 | 38.618 | 492 | 248 | 14 | 5 | 466 | 1 | 468 | 4.09e-94 | 295 |
| Msa0772310 | MtrunA17_Chr6g0452401 | 37.744 | 461 | 234 | 9 | 43 | 467 | 5 | 448 | 4.79e-94 | 293 |
| Msa0772310 | MtrunA17_Chr7g0215951 | 36.943 | 471 | 257 | 8 | 22 | 467 | 5 | 460 | 4.18e-92 | 288 |
| Msa0772310 | MtrunA17_Chr6g0452391 | 37.045 | 467 | 259 | 9 | 24 | 467 | 5 | 459 | 1.73e-91 | 288 |
| Msa0772310 | MtrunA17_Chr6g0452411 | 41.534 | 378 | 181 | 7 | 118 | 467 | 1 | 366 | 1.55e-90 | 282 |
| Msa0772310 | MtrunA17_Chr6g0452371 | 37.045 | 467 | 259 | 8 | 24 | 467 | 7 | 461 | 1.34e-89 | 283 |
| Msa0772310 | MtrunA17_Chr4g0059811 | 34.325 | 504 | 270 | 13 | 22 | 485 | 10 | 492 | 7.04e-88 | 278 |
| Msa0772310 | MtrunA17_Chr1g0155121 | 37.650 | 417 | 212 | 8 | 81 | 467 | 63 | 461 | 6.06e-87 | 275 |
| Msa0772310 | MtrunA17_Chr6g0466811 | 39.394 | 396 | 204 | 8 | 84 | 467 | 80 | 451 | 4.17e-86 | 273 |
| Msa0772310 | MtrunA17_Chr4g0072491 | 34.573 | 457 | 256 | 8 | 20 | 452 | 6 | 443 | 8.96e-85 | 270 |
| Msa0772310 | MtrunA17_Chr2g0308991 | 37.740 | 416 | 218 | 10 | 83 | 483 | 67 | 456 | 2.00e-84 | 269 |
| Msa0772310 | MtrunA17_Chr6g0452361 | 49.587 | 242 | 108 | 3 | 229 | 467 | 1 | 231 | 8.33e-74 | 234 |
| Msa0772310 | MtrunA17_Chr5g0404671 | 86.179 | 123 | 17 | 0 | 363 | 485 | 1 | 123 | 2.18e-70 | 221 |
| Msa0772310 | MtrunA17_Chr5g0404681 | 77.778 | 126 | 27 | 1 | 158 | 283 | 28 | 152 | 6.11e-66 | 209 |
| Msa0772310 | MtrunA17_Chr3g0127381 | 35.342 | 365 | 180 | 10 | 112 | 467 | 97 | 414 | 7.51e-66 | 220 |
| Msa0772310 | MtrunA17_Chr7g0276031 | 34.066 | 364 | 184 | 9 | 109 | 467 | 93 | 405 | 7.62e-66 | 219 |
| Msa0772310 | MtrunA17_Chr5g0404691 | 63.158 | 171 | 46 | 2 | 302 | 472 | 1 | 154 | 8.99e-62 | 198 |
| Msa0772310 | MtrunA17_Chr8g0346371 | 30.913 | 427 | 230 | 12 | 55 | 467 | 39 | 414 | 2.73e-59 | 202 |
| Msa0772310 | MtrunA17_Chr6g0452481 | 42.424 | 264 | 127 | 5 | 213 | 467 | 7 | 254 | 2.81e-59 | 197 |
| Msa0772310 | MtrunA17_Chr3g0134841 | 72.477 | 109 | 29 | 1 | 14 | 121 | 26 | 134 | 4.93e-51 | 170 |
| Msa0772310 | MtrunA17_Chr1g0148871 | 41.129 | 124 | 71 | 1 | 346 | 469 | 12 | 133 | 1.31e-23 | 97.8 |
| Msa0772310 | MtrunA17_Chr5g0404451 | 84.091 | 44 | 7 | 0 | 396 | 439 | 1 | 44 | 5.39e-18 | 77.8 |
| Msa0772310 | MtrunA17_Chr3g0145011 | 31.902 | 163 | 88 | 6 | 249 | 404 | 166 | 312 | 1.10e-11 | 66.6 |
| Msa0772310 | MtrunA17_Chr3g0141901 | 31.288 | 163 | 89 | 6 | 249 | 404 | 163 | 309 | 1.72e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772310 | AT2G18193.1 | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 1.44e-134 | 398 |
| Msa0772310 | AT2G18190.1 | 43.515 | 478 | 226 | 8 | 12 | 474 | 4 | 452 | 1.97e-132 | 392 |
| Msa0772310 | AT3G50940.1 | 44.685 | 461 | 230 | 6 | 10 | 467 | 3 | 441 | 8.19e-131 | 387 |
| Msa0772310 | AT5G17760.1 | 43.413 | 463 | 246 | 5 | 15 | 471 | 6 | 458 | 4.46e-124 | 372 |
| Msa0772310 | AT5G17730.1 | 43.137 | 459 | 240 | 7 | 12 | 467 | 3 | 443 | 1.24e-121 | 364 |
| Msa0772310 | AT5G17740.1 | 43.355 | 459 | 240 | 7 | 15 | 467 | 6 | 450 | 8.37e-121 | 364 |
| Msa0772310 | AT3G50930.1 | 42.760 | 442 | 230 | 5 | 34 | 467 | 73 | 499 | 3.88e-118 | 358 |
| Msa0772310 | AT4G05380.1 | 39.496 | 476 | 263 | 8 | 10 | 479 | 3 | 459 | 1.23e-109 | 333 |
| Msa0772310 | AT1G43910.1 | 37.660 | 470 | 257 | 10 | 10 | 467 | 2 | 447 | 1.51e-98 | 305 |
| Msa0772310 | AT5G17750.1 | 39.110 | 427 | 214 | 6 | 15 | 436 | 6 | 391 | 1.00e-97 | 300 |
| Msa0772310 | AT3G28510.1 | 41.565 | 409 | 201 | 7 | 82 | 468 | 67 | 459 | 2.47e-96 | 301 |
| Msa0772310 | AT3G28610.1 | 39.062 | 448 | 224 | 11 | 55 | 485 | 52 | 467 | 9.54e-95 | 295 |
| Msa0772310 | AT3G28600.1 | 37.662 | 462 | 232 | 11 | 33 | 467 | 14 | 446 | 3.21e-94 | 294 |
| Msa0772310 | AT3G28570.2 | 37.149 | 498 | 256 | 14 | 1 | 483 | 1 | 456 | 2.89e-91 | 285 |
| Msa0772310 | AT4G25835.1 | 34.316 | 475 | 279 | 10 | 27 | 485 | 9 | 466 | 5.00e-91 | 286 |
| Msa0772310 | AT3G28570.1 | 37.143 | 490 | 251 | 14 | 9 | 483 | 2 | 449 | 3.31e-90 | 283 |
| Msa0772310 | AT3G28580.1 | 37.029 | 478 | 244 | 12 | 13 | 463 | 8 | 455 | 6.02e-90 | 283 |
| Msa0772310 | AT3G28540.1 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 3.73e-89 | 282 |
| Msa0772310 | AT3G28540.2 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 3.93e-89 | 281 |
| Msa0772310 | AT5G40000.1 | 36.025 | 483 | 244 | 16 | 12 | 468 | 7 | 450 | 2.00e-88 | 278 |
| Msa0772310 | AT5G40010.1 | 36.632 | 475 | 255 | 9 | 13 | 463 | 8 | 460 | 7.20e-88 | 278 |
| Msa0772310 | AT5G57480.1 | 33.548 | 465 | 273 | 7 | 27 | 467 | 9 | 461 | 3.01e-86 | 275 |
| Msa0772310 | AT3G28600.2 | 45.886 | 316 | 147 | 7 | 165 | 467 | 103 | 407 | 5.14e-82 | 261 |
| Msa0772310 | AT3G28520.1 | 44.073 | 329 | 163 | 5 | 155 | 466 | 117 | 441 | 6.65e-82 | 262 |
| Msa0772310 | AT4G30250.1 | 33.546 | 471 | 279 | 8 | 20 | 468 | 2 | 460 | 3.33e-81 | 261 |
| Msa0772310 | AT4G30250.2 | 33.546 | 471 | 279 | 8 | 20 | 468 | 4 | 462 | 3.73e-81 | 261 |
| Msa0772310 | AT3G28580.2 | 35.106 | 470 | 242 | 11 | 13 | 463 | 8 | 433 | 8.97e-78 | 251 |
| Msa0772310 | AT5G17760.2 | 41.195 | 318 | 182 | 2 | 15 | 328 | 6 | 322 | 1.01e-75 | 241 |
| Msa0772310 | AT2G46620.1 | 32.684 | 462 | 232 | 14 | 25 | 467 | 15 | 416 | 7.29e-69 | 228 |
| Msa0772310 | AT3G29800.1 | 38.068 | 352 | 162 | 10 | 123 | 465 | 74 | 378 | 6.61e-61 | 206 |
| Msa0772310 | AT4G05340.1 | 55.844 | 77 | 32 | 1 | 344 | 420 | 19 | 93 | 6.56e-21 | 87.8 |
| Msa0772310 | AT5G43010.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 9.48e-12 | 67.0 |
| Msa0772310 | AT1G45000.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.33e-11 | 66.6 |
| Msa0772310 | AT3G28560.1 | 26.316 | 152 | 93 | 2 | 91 | 232 | 69 | 211 | 8.33e-11 | 62.8 |
Find 84 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGGTCTACTTTGTCTTTA+TGG | 0.060295 | 5_2:-46643187 | None:intergenic |
| TGAACAAATTGAAGAGTTAT+TGG | 0.142527 | 5_2:+46643328 | Msa0772310:CDS |
| CACTTCAAATTGATCAGTTT+TGG | 0.150920 | 5_2:+46636902 | Msa0772310:CDS |
| TCAAAAGACTATGAAGAAAA+TGG | 0.215368 | 5_2:+46637174 | Msa0772310:CDS |
| TGAAGTGAAACTTGGTTATT+TGG | 0.217186 | 5_2:-46636886 | None:intergenic |
| TAGAAGTTTACTTAATTTAT+TGG | 0.221662 | 5_2:+46643806 | Msa0772310:three_prime_UTR |
| TTGATGATATCAAGCTTAAA+TGG | 0.279360 | 5_2:+46637076 | Msa0772310:CDS |
| CCAGACAAAGTAAACTTTCT+AGG | 0.283489 | 5_2:-46643095 | None:intergenic |
| TTTAGTAGGGATATACTCTT+TGG | 0.296287 | 5_2:-46636956 | None:intergenic |
| GTCTGGTCTGCTTAACTATA+TGG | 0.299508 | 5_2:+46643112 | Msa0772310:CDS |
| ACCAGACAAGTTTCCAGATA+TGG | 0.299840 | 5_2:+46637683 | Msa0772310:CDS |
| AAAACTACAATAACATAATA+AGG | 0.310725 | 5_2:-46643544 | None:intergenic |
| TAGAACTATGTTGTTATGTT+TGG | 0.314741 | 5_2:-46637019 | None:intergenic |
| CCTAGAAAGTTTACTTTGTC+TGG | 0.319922 | 5_2:+46643095 | Msa0772310:CDS |
| AAACGTGGTTACTTATTGTA+TGG | 0.340622 | 5_2:+46637468 | Msa0772310:CDS |
| TATTCACCTGTCATTTCTTA+AGG | 0.345095 | 5_2:+46643241 | Msa0772310:CDS |
| GAAATTTGATGTGTATGATT+TGG | 0.345687 | 5_2:+46637542 | Msa0772310:CDS |
| AATCTTAGCTTCTAATTACT+TGG | 0.364231 | 5_2:+46643277 | Msa0772310:CDS |
| AAGATTCATTCTATGCAATC+TGG | 0.364238 | 5_2:+46637303 | Msa0772310:CDS |
| AGCTAAGATTCTGAATGCTT+TGG | 0.381245 | 5_2:-46643264 | None:intergenic |
| TTAACTATATGGATGGATTA+TGG | 0.388329 | 5_2:+46643123 | Msa0772310:CDS |
| ATCAAAACCATCATCATTGT+TGG | 0.393123 | 5_2:-46637115 | None:intergenic |
| TTCATTTGATTCACTTGCTA+TGG | 0.396517 | 5_2:+46637359 | Msa0772310:CDS |
| TCCATATCTGGAAACTTGTC+TGG | 0.403332 | 5_2:-46637684 | None:intergenic |
| CTTTGGCTGCATAGTAAAGA+TGG | 0.405145 | 5_2:-46636939 | None:intergenic |
| CGACCAGGGCGCAACAATGC+TGG | 0.407208 | 5_2:-46643206 | None:intergenic |
| TCTAATTACTTGGACATTGA+AGG | 0.412074 | 5_2:+46643287 | Msa0772310:CDS |
| TTGTATGGACCACCAGGAAC+TGG | 0.437605 | 5_2:+46637483 | Msa0772310:CDS |
| TTTAAGGGATTTGTAAGTGT+TGG | 0.439054 | 5_2:-46636983 | None:intergenic |
| ACTTACAAATCCCTTAAAGT+TGG | 0.449216 | 5_2:+46636988 | Msa0772310:CDS |
| GTTAAATCACTTTGTTTCCA+TGG | 0.449328 | 5_2:-46637327 | None:intergenic |
| ATCTAGTCTTATTGCTGCTA+TGG | 0.454061 | 5_2:+46637509 | Msa0772310:CDS |
| CAAAAGACTATGAAGAAAAT+GGG | 0.454921 | 5_2:+46637175 | Msa0772310:CDS |
| GAAGATCCTGATGTTGCTCT+TGG | 0.456206 | 5_2:+46643401 | Msa0772310:CDS |
| AAGAGAAACGACCAGCCATT+GGG | 0.459849 | 5_2:-46636702 | None:intergenic |
| TCTTCTTCATTCACAAACAT+TGG | 0.471142 | 5_2:+46636721 | Msa0772310:CDS |
| AGATGCTCTGCCACTACAGC+AGG | 0.481417 | 5_2:-46643368 | None:intergenic |
| GAAAATTCCAACAATGATGA+TGG | 0.483127 | 5_2:+46637108 | Msa0772310:CDS |
| GATCAATTTGAAGTGAAACT+TGG | 0.486219 | 5_2:-46636894 | None:intergenic |
| ACTTATGATGCTATAAAAGC+AGG | 0.490362 | 5_2:+46637267 | Msa0772310:CDS |
| GAAGAGAAACGACCAGCCAT+TGG | 0.494934 | 5_2:-46636703 | None:intergenic |
| GTGAAACTTGGTTATTTGGT+TGG | 0.495911 | 5_2:-46636882 | None:intergenic |
| CATCATGAATGTTGAGAATG+AGG | 0.500871 | 5_2:-46636773 | None:intergenic |
| GATACTTATATTTATAGTGA+TGG | 0.501527 | 5_2:-46636634 | None:intergenic |
| ATTGTTGCGCCCTGGTCGTA+TGG | 0.508196 | 5_2:+46643211 | Msa0772310:CDS |
| AATGATATCTGAAATTGTAA+TGG | 0.510074 | 5_2:-46643699 | None:intergenic |
| ACATTGGTTCAGCATCATCA+TGG | 0.528828 | 5_2:+46636737 | Msa0772310:CDS |
| GCAAGTGAATCAAATGAAGC+AGG | 0.530314 | 5_2:-46637354 | None:intergenic |
| TCATGTTTATGTGTGGAGAA+TGG | 0.530818 | 5_2:-46636675 | None:intergenic |
| GACCCAGCATTGTTGCGCCC+TGG | 0.532969 | 5_2:+46643203 | Msa0772310:CDS |
| AATTTCAGATATCATTCAGT+AGG | 0.538203 | 5_2:+46643706 | Msa0772310:three_prime_UTR |
| AGATGTCACCCCTGCTGTAG+TGG | 0.539506 | 5_2:+46643358 | Msa0772310:CDS |
| GACCAGGGCGCAACAATGCT+GGG | 0.539616 | 5_2:-46643205 | None:intergenic |
| AATAAGTAACCACGTTTCCA+AGG | 0.540396 | 5_2:-46637462 | None:intergenic |
| GAAGCATAGAGATAAAGTAA+TGG | 0.547256 | 5_2:+46637218 | Msa0772310:CDS |
| AACATGAGATCCCCAATGGC+TGG | 0.550254 | 5_2:+46636691 | Msa0772310:exon |
| AGTTCCCTCTAGTATTGTAA+AGG | 0.554385 | 5_2:+46643613 | Msa0772310:three_prime_UTR |
| CTTTGGCCTTAAGAAATGAC+AGG | 0.554977 | 5_2:-46643247 | None:intergenic |
| AGTGCTCCAAGAGCAACATC+AGG | 0.565349 | 5_2:-46643407 | None:intergenic |
| TACTTATTGTATGGACCACC+AGG | 0.566152 | 5_2:+46637477 | Msa0772310:CDS |
| TCTATTAGATGTCTCTCTCA+TGG | 0.569550 | 5_2:-46637604 | None:intergenic |
| AGACATTGATTGCAATTCAG+AGG | 0.577579 | 5_2:+46637644 | Msa0772310:CDS |
| ATATGCATGTCCATACGACC+AGG | 0.580884 | 5_2:-46643221 | None:intergenic |
| TCATAAGTGCTTAAAACATG+TGG | 0.584224 | 5_2:-46637252 | None:intergenic |
| GGTCTGCTTAACTATATGGA+TGG | 0.584910 | 5_2:+46643116 | Msa0772310:CDS |
| GTTGGTAAACCTTGGAAACG+TGG | 0.595078 | 5_2:+46637453 | Msa0772310:CDS |
| TGATGGAAAACAAGTAGTGG+AGG | 0.599321 | 5_2:+46637047 | Msa0772310:CDS |
| ATGATATCAAGCTTAAATGG+AGG | 0.601584 | 5_2:+46637079 | Msa0772310:CDS |
| AGTATAAGGAATATAAGCAT+AGG | 0.601948 | 5_2:+46637151 | Msa0772310:CDS |
| ATTCTATGCAATCTGGACCA+TGG | 0.603360 | 5_2:+46637310 | Msa0772310:CDS |
| GATGCTCTGCCACTACAGCA+GGG | 0.622894 | 5_2:-46643367 | None:intergenic |
| GATGGATTATGGTCAAGTTG+TGG | 0.629162 | 5_2:+46643134 | Msa0772310:CDS |
| CATACCTTTACAATACTAGA+GGG | 0.632099 | 5_2:-46643617 | None:intergenic |
| TAGTGGCAGAGCATCTGTTG+AGG | 0.639929 | 5_2:+46643375 | Msa0772310:CDS |
| GCATACCTTTACAATACTAG+AGG | 0.643016 | 5_2:-46643618 | None:intergenic |
| AGAGAAACGACCAGCCATTG+GGG | 0.650854 | 5_2:-46636701 | None:intergenic |
| GGGGATCTCATGTTTATGTG+TGG | 0.653524 | 5_2:-46636682 | None:intergenic |
| AGTAATTTGTCACACAACTG+AGG | 0.662002 | 5_2:-46643508 | None:intergenic |
| ATGCTCTGCCACTACAGCAG+GGG | 0.668814 | 5_2:-46643366 | None:intergenic |
| ATTATGGTCAAGTTGTGGAG+AGG | 0.680915 | 5_2:+46643139 | Msa0772310:CDS |
| AATTTGTCACACAACTGAGG+AGG | 0.686396 | 5_2:-46643505 | None:intergenic |
| CATAAACATGAGATCCCCAA+TGG | 0.689465 | 5_2:+46636687 | Msa0772310:exon |
| TATGCATGTCCATACGACCA+GGG | 0.693400 | 5_2:-46643220 | None:intergenic |
| GACAAAGTAAACTTTCTAGG+CGG | 0.728578 | 5_2:-46643092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTATATTTTATA+TGG | - | chr5_2:46636599-46636618 | None:intergenic | 0.0% |
| !!! | ATTTTTATTTAAAAATATAT+TGG | + | chr5_2:46638571-46638590 | Msa0772310:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr5_2:46639208-46639227 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr5_2:46639209-46639228 | None:intergenic | 0.0% |
| !!! | AATTATAGAATTTTTTAGAT+CGG | - | chr5_2:46637388-46637407 | None:intergenic | 10.0% |
| !!! | AAGTATTAATTTTTGTAAAT+TGG | + | chr5_2:46638685-46638704 | Msa0772310:intron | 10.0% |
| !!! | AGTATTAATTTTTGTAAATT+GGG | + | chr5_2:46638686-46638705 | Msa0772310:intron | 10.0% |
| !! | ATGTCTAATATATATATATA+TGG | + | chr5_2:46638894-46638913 | Msa0772310:intron | 10.0% |
| !! | TGTCTAATATATATATATAT+GGG | + | chr5_2:46638895-46638914 | Msa0772310:intron | 10.0% |
| !! | TAAATATAAAATGACATAAA+AGG | + | chr5_2:46639536-46639555 | Msa0772310:intron | 10.0% |
| !! | AAATATAAAATGACATAAAA+GGG | + | chr5_2:46639537-46639556 | Msa0772310:intron | 10.0% |
| !! | AAAAAAAAAAAGAAGATAAA+TGG | + | chr5_2:46639816-46639835 | Msa0772310:intron | 10.0% |
| !!! | ATTCATTTCTAATTTTTTTA+GGG | - | chr5_2:46640716-46640735 | None:intergenic | 10.0% |
| !!! | AATTCATTTCTAATTTTTTT+AGG | - | chr5_2:46640717-46640736 | None:intergenic | 10.0% |
| !! | CTGAAATTAAAAAATTAATA+AGG | + | chr5_2:46642649-46642668 | Msa0772310:intron | 10.0% |
| !!! | ATGAAATTTCTAAGTTTTAA+GGG | - | chr5_2:46636829-46636848 | None:intergenic | 15.0% |
| !!! | ATTATAGAATTTTTTAGATC+GGG | - | chr5_2:46637387-46637406 | None:intergenic | 15.0% |
| !! | AAAAAGTTGTATAAAAAAGT+TGG | + | chr5_2:46637435-46637454 | Msa0772310:CDS | 15.0% |
| !!! | TTTTTTTTTTAGTTTGAGTT+TGG | + | chr5_2:46637834-46637853 | Msa0772310:intron | 15.0% |
| !!! | CAATTTTAAAAAGAAAGAAA+TGG | - | chr5_2:46637987-46638006 | None:intergenic | 15.0% |
| !!! | TATAATTTAATTAGAGTACT+AGG | - | chr5_2:46638048-46638067 | None:intergenic | 15.0% |
| !! | GTCTAATATATATATATATG+GGG | + | chr5_2:46638896-46638915 | Msa0772310:intron | 15.0% |
| !! | AACTTGATATTTAAATATTC+AGG | + | chr5_2:46639590-46639609 | Msa0772310:intron | 15.0% |
| !! | AAATTTATTTAAGTATAACG+AGG | + | chr5_2:46639705-46639724 | Msa0772310:intron | 15.0% |
| !!! | TATATATACTTTTTTGTCAA+CGG | + | chr5_2:46639728-46639747 | Msa0772310:intron | 15.0% |
| !! | TCAAAAAAATAAAATAACGA+GGG | + | chr5_2:46639941-46639960 | Msa0772310:intron | 15.0% |
| !! | ATTTATTAGTGAAAAAAATG+AGG | + | chr5_2:46639970-46639989 | Msa0772310:intron | 15.0% |
| !! | TTTATTAGTGAAAAAAATGA+GGG | + | chr5_2:46639971-46639990 | Msa0772310:intron | 15.0% |
| !! | TTATAATAAAAGGGTAAAAA+TGG | + | chr5_2:46640027-46640046 | Msa0772310:intron | 15.0% |
| !! | TGAATAAAAGTAAAAAACTT+AGG | - | chr5_2:46640539-46640558 | None:intergenic | 15.0% |
| !!! | TTTGTTTGTTAAAAAATTCT+GGG | - | chr5_2:46640620-46640639 | None:intergenic | 15.0% |
| !!! | AATCAATTTTAGCATTTTAT+GGG | - | chr5_2:46640643-46640662 | None:intergenic | 15.0% |
| !!! | AAAATTTAAGATTTAAGTGA+AGG | - | chr5_2:46640670-46640689 | None:intergenic | 15.0% |
| !!! | TTAGAAATGAATTAATTTTC+AGG | + | chr5_2:46640724-46640743 | Msa0772310:intron | 15.0% |
| !!! | TTCTCTTAATTTTTTATTCT+GGG | - | chr5_2:46641180-46641199 | None:intergenic | 15.0% |
| !! | GTTAAAAAATCAAAAGTAAT+AGG | - | chr5_2:46641765-46641784 | None:intergenic | 15.0% |
| !!! | TTACTTTTGATTTTTTAACA+AGG | + | chr5_2:46641766-46641785 | Msa0772310:intron | 15.0% |
| !!! | TTTGATCTTTTTTTCAAAAA+GGG | - | chr5_2:46642626-46642645 | None:intergenic | 15.0% |
| !!! | TTTTTGAAAAAAAGATCAAA+GGG | + | chr5_2:46642626-46642645 | Msa0772310:intron | 15.0% |
| !! | TAAAAAATTAATAAGGTCTA+CGG | + | chr5_2:46642656-46642675 | Msa0772310:intron | 15.0% |
| !! | AAAACTACAATAACATAATA+AGG | - | chr5_2:46643547-46643566 | None:intergenic | 15.0% |
| !! | TAGAAGTTTACTTAATTTAT+TGG | + | chr5_2:46643806-46643825 | Msa0772310:three_prime_UTR | 15.0% |
| !! | GATACTTATATTTATAGTGA+TGG | - | chr5_2:46636637-46636656 | None:intergenic | 20.0% |
| !!! | GATGAAATTTCTAAGTTTTA+AGG | - | chr5_2:46636830-46636849 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAAAGTTTTGACT+GGG | + | chr5_2:46637894-46637913 | Msa0772310:intron | 20.0% |
| !!! | ACTAGGTTAATATACATTTT+TGG | - | chr5_2:46638031-46638050 | None:intergenic | 20.0% |
| !! | TAACTAGATATAAAGTGATT+AGG | + | chr5_2:46638191-46638210 | Msa0772310:intron | 20.0% |
| !! | AAAATATATTGGATACCTTA+AGG | + | chr5_2:46638582-46638601 | Msa0772310:intron | 20.0% |
| !! | AAGTTAATAAATACACCTTA+AGG | + | chr5_2:46638978-46638997 | Msa0772310:intron | 20.0% |
| !! | ACGTCAAAAATTTCAAATTT+AGG | - | chr5_2:46639280-46639299 | None:intergenic | 20.0% |
| !!! | TATTTTTTGTCAACAACATA+AGG | + | chr5_2:46639760-46639779 | Msa0772310:intron | 20.0% |
| !! | AAAAAAAAGAAGATAAATGG+AGG | + | chr5_2:46639819-46639838 | Msa0772310:intron | 20.0% |
| !! | AACATAAGACAAAAGATAAA+TGG | + | chr5_2:46639856-46639875 | Msa0772310:intron | 20.0% |
| !! | AAGTGAGATAAATAATAATG+AGG | + | chr5_2:46639908-46639927 | Msa0772310:intron | 20.0% |
| !! | AGTGAGATAAATAATAATGA+GGG | + | chr5_2:46639909-46639928 | Msa0772310:intron | 20.0% |
| !! | GTCAAAAAAATAAAATAACG+AGG | + | chr5_2:46639940-46639959 | Msa0772310:intron | 20.0% |
| !!! | TGGATTTTAGATAAAACAAT+AGG | + | chr5_2:46640047-46640066 | Msa0772310:intron | 20.0% |
| !!! | GGATTTTAGATAAAACAATA+GGG | + | chr5_2:46640048-46640067 | Msa0772310:intron | 20.0% |
| !!! | GATTTTAGATAAAACAATAG+GGG | + | chr5_2:46640049-46640068 | Msa0772310:intron | 20.0% |
| !!! | TGAAAGTATTGTCATATTTT+TGG | + | chr5_2:46640311-46640330 | Msa0772310:intron | 20.0% |
| !!! | GTTTGTTTGTTAAAAAATTC+TGG | - | chr5_2:46640621-46640640 | None:intergenic | 20.0% |
| !!! | CAATCAATTTTAGCATTTTA+TGG | - | chr5_2:46640644-46640663 | None:intergenic | 20.0% |
| !!! | CTTCTCTTAATTTTTTATTC+TGG | - | chr5_2:46641181-46641200 | None:intergenic | 20.0% |
| !! | CAGAATAAAAAATTAAGAGA+AGG | + | chr5_2:46641179-46641198 | Msa0772310:intron | 20.0% |
| !! | AGTTTCAAATATTAAGAAGA+TGG | + | chr5_2:46641338-46641357 | Msa0772310:intron | 20.0% |
| !! | GTTTCAAATATTAAGAAGAT+GGG | + | chr5_2:46641339-46641358 | Msa0772310:intron | 20.0% |
| !! | TACATGTATAATTGTTTCAT+GGG | - | chr5_2:46641551-46641570 | None:intergenic | 20.0% |
| !! | ATACATGTATAATTGTTTCA+TGG | - | chr5_2:46641552-46641571 | None:intergenic | 20.0% |
| !! | TGTATTAAATCAGATTAGAT+CGG | + | chr5_2:46641567-46641586 | Msa0772310:intron | 20.0% |
| !! | AATTGATGGAAAGAAATTTA+GGG | - | chr5_2:46642149-46642168 | None:intergenic | 20.0% |
| !! | TAATTGATGGAAAGAAATTT+AGG | - | chr5_2:46642150-46642169 | None:intergenic | 20.0% |
| !!! | AATTAAGTTTTTTGTGATTC+TGG | + | chr5_2:46642463-46642482 | Msa0772310:intron | 20.0% |
| !!! | TTGATCTTTTTTTCAAAAAG+GGG | - | chr5_2:46642625-46642644 | None:intergenic | 20.0% |
| !!! | CTTTGATCTTTTTTTCAAAA+AGG | - | chr5_2:46642627-46642646 | None:intergenic | 20.0% |
| !!! | CTTTTTGAAAAAAAGATCAA+AGG | + | chr5_2:46642625-46642644 | Msa0772310:intron | 20.0% |
| !!! | AACTCTAAAAATTTCCTTTT+TGG | - | chr5_2:46642764-46642783 | None:intergenic | 20.0% |
| !!! | CTTATTTGTTGTTTTCATTT+TGG | - | chr5_2:46642793-46642812 | None:intergenic | 20.0% |
| !! | ATGAAAACAACAAATAAGTT+AGG | + | chr5_2:46642795-46642814 | Msa0772310:intron | 20.0% |
| !! | TGAAAACAACAAATAAGTTA+GGG | + | chr5_2:46642796-46642815 | Msa0772310:intron | 20.0% |
| !!! | ATAAACTTAATTTTTGACAG+TGG | - | chr5_2:46642888-46642907 | None:intergenic | 20.0% |
| !!! | AAAATGTAAGTCATTTTTAG+TGG | - | chr5_2:46642940-46642959 | None:intergenic | 20.0% |
| !!! | AATGATATCTGAAATTGTAA+TGG | - | chr5_2:46643702-46643721 | None:intergenic | 20.0% |
| !! | ACTTCAAATTGATCAGTTTT+GGG | + | chr5_2:46636903-46636922 | Msa0772310:CDS | 25.0% |
| !!! | AAGTGTTGGATATTTTAGTA+GGG | - | chr5_2:46636972-46636991 | None:intergenic | 25.0% |
| !!! | TAAGTGTTGGATATTTTAGT+AGG | - | chr5_2:46636973-46636992 | None:intergenic | 25.0% |
| !! | GGATATTTTTCCAACTTTAA+GGG | - | chr5_2:46637001-46637020 | None:intergenic | 25.0% |
| !! | TGGATATTTTTCCAACTTTA+AGG | - | chr5_2:46637002-46637021 | None:intergenic | 25.0% |
| ! | TAGAACTATGTTGTTATGTT+TGG | - | chr5_2:46637022-46637041 | None:intergenic | 25.0% |
| !! | TTGATGATATCAAGCTTAAA+TGG | + | chr5_2:46637076-46637095 | Msa0772310:CDS | 25.0% |
| !! | TATTCCTTATACTCCTTTTT+GGG | - | chr5_2:46637144-46637163 | None:intergenic | 25.0% |
| !! | ATATTCCTTATACTCCTTTT+TGG | - | chr5_2:46637145-46637164 | None:intergenic | 25.0% |
| ! | AGTATAAGGAATATAAGCAT+AGG | + | chr5_2:46637151-46637170 | Msa0772310:CDS | 25.0% |
| ! | TCAAAAGACTATGAAGAAAA+TGG | + | chr5_2:46637174-46637193 | Msa0772310:CDS | 25.0% |
| ! | CAAAAGACTATGAAGAAAAT+GGG | + | chr5_2:46637175-46637194 | Msa0772310:CDS | 25.0% |
| !!! | ATGATTTAGATCGATTTTTG+AGG | + | chr5_2:46637409-46637428 | Msa0772310:CDS | 25.0% |
| !!! | ATAAAAAAGTTGGTAAACCT+TGG | + | chr5_2:46637445-46637464 | Msa0772310:CDS | 25.0% |
| ! | GAAATTTGATGTGTATGATT+TGG | + | chr5_2:46637542-46637561 | Msa0772310:CDS | 25.0% |
| !!! | CAGATATGGATTTTTTAGAT+GGG | + | chr5_2:46637697-46637716 | Msa0772310:CDS | 25.0% |
| !!! | CAAGTTTTAAAAGTTTTGAC+TGG | + | chr5_2:46637893-46637912 | Msa0772310:intron | 25.0% |
| ! | AATCAGAATACTTATTCACT+TGG | - | chr5_2:46638080-46638099 | None:intergenic | 25.0% |
| !! | TAGTTAGTCTAATTTAGAGA+AGG | - | chr5_2:46638177-46638196 | None:intergenic | 25.0% |
| ! | TAAATCATTTGGATACTTCT+GGG | - | chr5_2:46638637-46638656 | None:intergenic | 25.0% |
| ! | TTAAATCATTTGGATACTTC+TGG | - | chr5_2:46638638-46638657 | None:intergenic | 25.0% |
| ! | GTAAATTGGGATCATTATAT+TGG | + | chr5_2:46638699-46638718 | Msa0772310:intron | 25.0% |
| !! | GTTGTTTATATGGTATGTTT+TGG | + | chr5_2:46638778-46638797 | Msa0772310:intron | 25.0% |
| !!! | TATGGTATGTTTTGGTTTAA+AGG | + | chr5_2:46638786-46638805 | Msa0772310:intron | 25.0% |
| !! | TTCAAATTTAGGATACGTTA+CGG | - | chr5_2:46639269-46639288 | None:intergenic | 25.0% |
| ! | AAAAATGAGGGATGTATATT+AGG | + | chr5_2:46639983-46640002 | Msa0772310:intron | 25.0% |
| ! | AAAATGAGGGATGTATATTA+GGG | + | chr5_2:46639984-46640003 | Msa0772310:intron | 25.0% |
| !!! | TTTTGGCTTAATTGAATCTT+TGG | + | chr5_2:46640328-46640347 | Msa0772310:intron | 25.0% |
| !!! | CTTATTTGTCGTTTTCAATT+TGG | + | chr5_2:46640359-46640378 | Msa0772310:intron | 25.0% |
| !!! | CAGGAAAATTTTAGAGTTAT+GGG | - | chr5_2:46640386-46640405 | None:intergenic | 25.0% |
| !!! | ACAGGAAAATTTTAGAGTTA+TGG | - | chr5_2:46640387-46640406 | None:intergenic | 25.0% |
| !!! | AACTCTAAAATTTTCCTGTT+TGG | + | chr5_2:46640388-46640407 | Msa0772310:intron | 25.0% |
| ! | ATTAGACATTAACAGACTAA+CGG | - | chr5_2:46640452-46640471 | None:intergenic | 25.0% |
| ! | ATCAAGAATAAGAAGATTGA+AGG | - | chr5_2:46640565-46640584 | None:intergenic | 25.0% |
| ! | GGGATAAAAATTGATGTTTA+TGG | - | chr5_2:46640696-46640715 | None:intergenic | 25.0% |
| ! | GGATGAAATTATTGTTATGT+TGG | - | chr5_2:46640761-46640780 | None:intergenic | 25.0% |
| !! | TTGATTCGAAATTAAGGTTA+GGG | - | chr5_2:46640902-46640921 | None:intergenic | 25.0% |
| !!! | ATTGATTCGAAATTAAGGTT+AGG | - | chr5_2:46640903-46640922 | None:intergenic | 25.0% |
| !!! | CAATGATTGATTCGAAATTA+AGG | - | chr5_2:46640908-46640927 | None:intergenic | 25.0% |
| ! | AAAAATTAAGAGAAGGAACA+CGG | + | chr5_2:46641186-46641205 | Msa0772310:intron | 25.0% |
| !! | TTTCACTATTTGAGATCTTT+GGG | + | chr5_2:46641231-46641250 | Msa0772310:intron | 25.0% |
| !!! | AGAAGCATAGTTTTAAAAAC+CGG | + | chr5_2:46641405-46641424 | Msa0772310:intron | 25.0% |
| ! | CAAAAGTAATAGGTTTGTAT+TGG | - | chr5_2:46641755-46641774 | None:intergenic | 25.0% |
| !!! | TAGGGTTATCATTATTTTGT+GGG | - | chr5_2:46641982-46642001 | None:intergenic | 25.0% |
| !!! | TTCATCATTTTGGAAAAGTA+GGG | - | chr5_2:46642000-46642019 | None:intergenic | 25.0% |
| ! | GAAATGTGAGAAATATAAAC+TGG | - | chr5_2:46642074-46642093 | None:intergenic | 25.0% |
| ! | ATAACAAAAATGCATTGAAC+CGG | + | chr5_2:46642251-46642270 | Msa0772310:intron | 25.0% |
| !!! | CTTTCCATAGTTTTAAAAAC+CGG | - | chr5_2:46642433-46642452 | None:intergenic | 25.0% |
| ! | ATAAGAAGATTAAGAAGATG+TGG | + | chr5_2:46642525-46642544 | Msa0772310:intron | 25.0% |
| ! | TAAGAAGATTAAGAAGATGT+GGG | + | chr5_2:46642526-46642545 | Msa0772310:intron | 25.0% |
| ! | TAGAGGTCTATTATATCTAT+CGG | - | chr5_2:46642590-46642609 | None:intergenic | 25.0% |
| ! | GAAAACAACAAATAAGTTAG+GGG | + | chr5_2:46642797-46642816 | Msa0772310:intron | 25.0% |
| !! | GTTTTCGTGTAGAAAAATAT+GGG | - | chr5_2:46642841-46642860 | None:intergenic | 25.0% |
| !! | TGTTTTCGTGTAGAAAAATA+TGG | - | chr5_2:46642842-46642861 | None:intergenic | 25.0% |
| ! | TTTAGTGGTTAATAAAGTAC+TGG | - | chr5_2:46642925-46642944 | None:intergenic | 25.0% |
| !!! | ACTTGTTTTTCTTGAAATTG+TGG | + | chr5_2:46643049-46643068 | Msa0772310:intron | 25.0% |
| !!! | TTAACTATATGGATGGATTA+TGG | + | chr5_2:46643123-46643142 | Msa0772310:CDS | 25.0% |
| ! | AATCTTAGCTTCTAATTACT+TGG | + | chr5_2:46643277-46643296 | Msa0772310:CDS | 25.0% |
| ! | TGAACAAATTGAAGAGTTAT+TGG | + | chr5_2:46643328-46643347 | Msa0772310:CDS | 25.0% |
| ! | AATTTCAGATATCATTCAGT+AGG | + | chr5_2:46643706-46643725 | Msa0772310:three_prime_UTR | 25.0% |
| TCTTCTTCATTCACAAACAT+TGG | + | chr5_2:46636721-46636740 | Msa0772310:CDS | 30.0% | |
| TGAAGTGAAACTTGGTTATT+TGG | - | chr5_2:46636889-46636908 | None:intergenic | 30.0% | |
| ! | GATCAATTTGAAGTGAAACT+TGG | - | chr5_2:46636897-46636916 | None:intergenic | 30.0% |
| ! | CACTTCAAATTGATCAGTTT+TGG | + | chr5_2:46636902-46636921 | Msa0772310:CDS | 30.0% |
| TTTAGTAGGGATATACTCTT+TGG | - | chr5_2:46636959-46636978 | None:intergenic | 30.0% | |
| TTTAAGGGATTTGTAAGTGT+TGG | - | chr5_2:46636986-46637005 | None:intergenic | 30.0% | |
| ACTTACAAATCCCTTAAAGT+TGG | + | chr5_2:46636988-46637007 | Msa0772310:CDS | 30.0% | |
| !!! | AACATAGTTCTAGCTTTTGA+TGG | + | chr5_2:46637030-46637049 | Msa0772310:CDS | 30.0% |
| ! | TTTTGATGGAAAACAAGTAG+TGG | + | chr5_2:46637044-46637063 | Msa0772310:CDS | 30.0% |
| ATGATATCAAGCTTAAATGG+AGG | + | chr5_2:46637079-46637098 | Msa0772310:CDS | 30.0% | |
| GAAAATTCCAACAATGATGA+TGG | + | chr5_2:46637108-46637127 | Msa0772310:CDS | 30.0% | |
| ATCAAAACCATCATCATTGT+TGG | - | chr5_2:46637118-46637137 | None:intergenic | 30.0% | |
| !!! | TGGTTTTGATAATCCCAAAA+AGG | + | chr5_2:46637128-46637147 | Msa0772310:CDS | 30.0% |
| ! | TAATCCCAAAAAGGAGTATA+AGG | + | chr5_2:46637137-46637156 | Msa0772310:CDS | 30.0% |
| GAAGCATAGAGATAAAGTAA+TGG | + | chr5_2:46637218-46637237 | Msa0772310:CDS | 30.0% | |
| TCATAAGTGCTTAAAACATG+TGG | - | chr5_2:46637255-46637274 | None:intergenic | 30.0% | |
| ACTTATGATGCTATAAAAGC+AGG | + | chr5_2:46637267-46637286 | Msa0772310:CDS | 30.0% | |
| AAGATTCATTCTATGCAATC+TGG | + | chr5_2:46637303-46637322 | Msa0772310:CDS | 30.0% | |
| ! | GTTAAATCACTTTGTTTCCA+TGG | - | chr5_2:46637330-46637349 | None:intergenic | 30.0% |
| ! | TTCATTTGATTCACTTGCTA+TGG | + | chr5_2:46637359-46637378 | Msa0772310:CDS | 30.0% |
| !! | ATTTAGATCGATTTTTGAGG+AGG | + | chr5_2:46637412-46637431 | Msa0772310:CDS | 30.0% |
| AAACGTGGTTACTTATTGTA+TGG | + | chr5_2:46637468-46637487 | Msa0772310:CDS | 30.0% | |
| CCATCTAAAAAATCCATATC+TGG | - | chr5_2:46637699-46637718 | None:intergenic | 30.0% | |
| !!! | CCAGATATGGATTTTTTAGA+TGG | + | chr5_2:46637696-46637715 | Msa0772310:CDS | 30.0% |
| !!! | GGATTTTTTAGATGGGATTA+AGG | + | chr5_2:46637704-46637723 | Msa0772310:CDS | 30.0% |
| TGTTTAACATGAGATAGTGA+AGG | - | chr5_2:46637744-46637763 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTGTTCAGGTCTAA+TGG | - | chr5_2:46638379-46638398 | None:intergenic | 30.0% |
| !!! | TAAGAGGATTTGTTTTGTTC+AGG | - | chr5_2:46638387-46638406 | None:intergenic | 30.0% |
| TATGTTATTCTACTGGTAAG+AGG | - | chr5_2:46638403-46638422 | None:intergenic | 30.0% | |
| GTTGGAATATGTTATTCTAC+TGG | - | chr5_2:46638410-46638429 | None:intergenic | 30.0% | |
| !! | TGATAAGTCTAGTCTTTTAC+TGG | - | chr5_2:46638432-46638451 | None:intergenic | 30.0% |
| TAAATCATTCGGATACTTCT+GGG | - | chr5_2:46638546-46638565 | None:intergenic | 30.0% | |
| TTAAATCATTCGGATACTTC+TGG | - | chr5_2:46638547-46638566 | None:intergenic | 30.0% | |
| ATATTGGCCATTACTTGAAA+AGG | + | chr5_2:46638715-46638734 | Msa0772310:intron | 30.0% | |
| TATTGGCCATTACTTGAAAA+GGG | + | chr5_2:46638716-46638735 | Msa0772310:intron | 30.0% | |
| GGTTTAAAGGATATCTTAGT+TGG | + | chr5_2:46638799-46638818 | Msa0772310:intron | 30.0% | |
| TACACCAAGTCAAAATACAA+TGG | - | chr5_2:46638833-46638852 | None:intergenic | 30.0% | |
| TTATAGCAACATACACCTTA+AGG | - | chr5_2:46638996-46639015 | None:intergenic | 30.0% | |
| ACCTTCTAACAAAAACAAGT+GGG | + | chr5_2:46639019-46639038 | Msa0772310:intron | 30.0% | |
| ! | ACTCCTTCTAAAAAGTAAGT+GGG | - | chr5_2:46639084-46639103 | None:intergenic | 30.0% |
| ! | TACTCCTTCTAAAAAGTAAG+TGG | - | chr5_2:46639085-46639104 | None:intergenic | 30.0% |
| GCAAGTGAATAACTAAAAAG+TGG | + | chr5_2:46639110-46639129 | Msa0772310:intron | 30.0% | |
| AATTAGACAATGACTCTGAT+CGG | + | chr5_2:46639407-46639426 | Msa0772310:intron | 30.0% | |
| ! | GAAGTGTTTGGTAAAATTAG+CGG | + | chr5_2:46639500-46639519 | Msa0772310:intron | 30.0% |
| !!! | ATATACTTTTTTGTCAACGG+AGG | + | chr5_2:46639731-46639750 | Msa0772310:intron | 30.0% |
| GATGTATATTAGGGAATTGT+AGG | + | chr5_2:46639993-46640012 | Msa0772310:intron | 30.0% | |
| TAAAACAATAGGGGTAAAAG+TGG | + | chr5_2:46640058-46640077 | Msa0772310:intron | 30.0% | |
| !! | GATCAAAAAGTGTTACCAAA+CGG | + | chr5_2:46640179-46640198 | Msa0772310:intron | 30.0% |
| TTGACAAAAATAGTTCCGTT+TGG | - | chr5_2:46640197-46640216 | None:intergenic | 30.0% | |
| !!! | AAGAGCTAAAAGCTCTTTTT+TGG | + | chr5_2:46640239-46640258 | Msa0772310:intron | 30.0% |
| ATACTTTCAGCTTAACTTCT+TGG | - | chr5_2:46640300-46640319 | None:intergenic | 30.0% | |
| ! | GAAAACGACAAATAAGTTGA+GGG | - | chr5_2:46640355-46640374 | None:intergenic | 30.0% |
| TGAAAACGACAAATAAGTTG+AGG | - | chr5_2:46640356-46640375 | None:intergenic | 30.0% | |
| !! | GTAAAAAACTTAGGTGTTGA+TGG | - | chr5_2:46640530-46640549 | None:intergenic | 30.0% |
| TTCATCCAAAGAACAATTTC+AGG | + | chr5_2:46640774-46640793 | Msa0772310:intron | 30.0% | |
| TGTTTCCTGAAATTGTTCTT+TGG | - | chr5_2:46640782-46640801 | None:intergenic | 30.0% | |
| ! | TTGAATAGTTGGTACAGATT+GGG | + | chr5_2:46641129-46641148 | Msa0772310:intron | 30.0% |
| ! | GTTTCACTATTTGAGATCTT+TGG | + | chr5_2:46641230-46641249 | Msa0772310:intron | 30.0% |
| GAAACATGAAACACTCAAAT+TGG | - | chr5_2:46641297-46641316 | None:intergenic | 30.0% | |
| TGTTTCATGTTTCAGCAATT+TGG | + | chr5_2:46641304-46641323 | Msa0772310:intron | 30.0% | |
| GTTTCATGTTTCAGCAATTT+GGG | + | chr5_2:46641305-46641324 | Msa0772310:intron | 30.0% | |
| ATGACTGAACCGTATTAAAT+CGG | + | chr5_2:46641502-46641521 | Msa0772310:intron | 30.0% | |
| GGTCAAAAATCAGATTAGAT+CGG | + | chr5_2:46641597-46641616 | Msa0772310:intron | 30.0% | |
| ! | AAAAAGCATGCTTAAGACAT+TGG | + | chr5_2:46641643-46641662 | Msa0772310:intron | 30.0% |
| TAAGAAGAAAACCAAGCTAA+AGG | + | chr5_2:46641930-46641949 | Msa0772310:intron | 30.0% | |
| !! | TTGATCTTTTAACTCTACGT+GGG | - | chr5_2:46641956-46641975 | None:intergenic | 30.0% |
| !! | TTTGATCTTTTAACTCTACG+TGG | - | chr5_2:46641957-46641976 | None:intergenic | 30.0% |
| ACGTAGAGTTAAAAGATCAA+AGG | + | chr5_2:46641956-46641975 | Msa0772310:intron | 30.0% | |
| !! | GTAGGGTTATCATTATTTTG+TGG | - | chr5_2:46641983-46642002 | None:intergenic | 30.0% |
| !! | CTTCATCATTTTGGAAAAGT+AGG | - | chr5_2:46642001-46642020 | None:intergenic | 30.0% |
| TGAGAAATATAAACTGGAAG+AGG | - | chr5_2:46642068-46642087 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTTCAAAAAGGGGA+CGG | - | chr5_2:46642621-46642640 | None:intergenic | 30.0% |
| AAAATTAATAAGGTCTACGG+TGG | + | chr5_2:46642659-46642678 | Msa0772310:intron | 30.0% | |
| AAATGTACCAACAATGTAGA+TGG | - | chr5_2:46642686-46642705 | None:intergenic | 30.0% | |
| ATCTACATTGTTGGTACATT+TGG | + | chr5_2:46642685-46642704 | Msa0772310:intron | 30.0% | |
| TCTACATTGTTGGTACATTT+GGG | + | chr5_2:46642686-46642705 | Msa0772310:intron | 30.0% | |
| ACAAATTTGAAGGACCAAAA+AGG | + | chr5_2:46642747-46642766 | Msa0772310:intron | 30.0% | |
| ! | GACTTACATTTTGCTAGTTA+AGG | + | chr5_2:46642948-46642967 | Msa0772310:intron | 30.0% |
| TCTTGAAATTGTGGAATAGA+TGG | + | chr5_2:46643058-46643077 | Msa0772310:intron | 30.0% | |
| ! | TATTCACCTGTCATTTCTTA+AGG | + | chr5_2:46643241-46643260 | Msa0772310:CDS | 30.0% |
| TCTAATTACTTGGACATTGA+AGG | + | chr5_2:46643287-46643306 | Msa0772310:CDS | 30.0% | |
| CATACCTTTACAATACTAGA+GGG | - | chr5_2:46643620-46643639 | None:intergenic | 30.0% | |
| TCATGTTTATGTGTGGAGAA+TGG | - | chr5_2:46636678-46636697 | None:intergenic | 35.0% | |
| CATCATGAATGTTGAGAATG+AGG | - | chr5_2:46636776-46636795 | None:intergenic | 35.0% | |
| GTGAAACTTGGTTATTTGGT+TGG | - | chr5_2:46636885-46636904 | None:intergenic | 35.0% | |
| !!! | CAAATTGATCAGTTTTGGGA+TGG | + | chr5_2:46636907-46636926 | Msa0772310:CDS | 35.0% |
| AATAAGTAACCACGTTTCCA+AGG | - | chr5_2:46637465-46637484 | None:intergenic | 35.0% | |
| !! | ATCTAGTCTTATTGCTGCTA+TGG | + | chr5_2:46637509-46637528 | Msa0772310:CDS | 35.0% |
| TCTATTAGATGTCTCTCTCA+TGG | - | chr5_2:46637607-46637626 | None:intergenic | 35.0% | |
| ! | AGACATTGATTGCAATTCAG+AGG | + | chr5_2:46637644-46637663 | Msa0772310:CDS | 35.0% |
| ACTGGGTCAGTTATAATTGT+AGG | + | chr5_2:46637911-46637930 | Msa0772310:intron | 35.0% | |
| ! | TTTTGTTCAGGTCTAATGGT+AGG | - | chr5_2:46638375-46638394 | None:intergenic | 35.0% |
| !! | AAGTCTAGTCTTTTACTGGT+TGG | - | chr5_2:46638428-46638447 | None:intergenic | 35.0% |
| GATACCTTAAGGATACGTTA+AGG | + | chr5_2:46638593-46638612 | Msa0772310:intron | 35.0% | |
| GTATCCTTAACGTATCCTTA+AGG | - | chr5_2:46638600-46638619 | None:intergenic | 35.0% | |
| !!! | TAGTCACCCTTTTCAAGTAA+TGG | - | chr5_2:46638725-46638744 | None:intergenic | 35.0% |
| TGACTATCTTCATACTACCT+TGG | + | chr5_2:46638739-46638758 | Msa0772310:intron | 35.0% | |
| CATAGTGCAGGTTGTTTATA+TGG | + | chr5_2:46638768-46638787 | Msa0772310:intron | 35.0% | |
| !! | AGGATATCTTAGTTGGTGAA+TGG | + | chr5_2:46638806-46638825 | Msa0772310:intron | 35.0% |
| !!! | TGGTCCATTGTATTTTGACT+TGG | + | chr5_2:46638826-46638845 | Msa0772310:intron | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr5_2:46638930-46638949 | Msa0772310:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | - | chr5_2:46639167-46639186 | None:intergenic | 35.0% | |
| CACCTTCTAACAAAAACAAG+TGG | + | chr5_2:46639018-46639037 | Msa0772310:intron | 35.0% | |
| !!! | ACCCACTTGTTTTTGTTAGA+AGG | - | chr5_2:46639023-46639042 | None:intergenic | 35.0% |
| TGTGTTCTAGCAAATCCTAT+AGG | + | chr5_2:46639042-46639061 | Msa0772310:intron | 35.0% | |
| GTGTTCTAGCAAATCCTATA+GGG | + | chr5_2:46639043-46639062 | Msa0772310:intron | 35.0% | |
| TGTTCTAGCAAATCCTATAG+GGG | + | chr5_2:46639044-46639063 | Msa0772310:intron | 35.0% | |
| !!! | ACACCCACTTACTTTTTAGA+AGG | + | chr5_2:46639078-46639097 | Msa0772310:intron | 35.0% |
| AAGTGGTTAAATACACCCTA+AGG | + | chr5_2:46639127-46639146 | Msa0772310:intron | 35.0% | |
| TTTAGCAAAGCTACACCTTA+GGG | - | chr5_2:46639145-46639164 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAAGCTACACCTT+AGG | - | chr5_2:46639146-46639165 | None:intergenic | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr5_2:46639167-46639186 | Msa0772310:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr5_2:46638930-46638949 | None:intergenic | 35.0% |
| ACTCTGATCGGTAAAAATAG+CGG | + | chr5_2:46639419-46639438 | Msa0772310:intron | 35.0% | |
| CATAAGGCAAGAGAGATAAA+TGG | + | chr5_2:46639776-46639795 | Msa0772310:intron | 35.0% | |
| AAAAACTGATTGGGTCTGTT+TGG | - | chr5_2:46640271-46640290 | None:intergenic | 35.0% | |
| TGGACATGCAAAAACTGATT+GGG | - | chr5_2:46640280-46640299 | None:intergenic | 35.0% | |
| TTGGACATGCAAAAACTGAT+TGG | - | chr5_2:46640281-46640300 | None:intergenic | 35.0% | |
| TACACCTTCGTTAGTAATAG+TGG | + | chr5_2:46640420-46640439 | Msa0772310:intron | 35.0% | |
| ACAATAGACATGCAATCAAG+TGG | - | chr5_2:46640494-46640513 | None:intergenic | 35.0% | |
| ! | GGAAAATTACTGCTCTTTTG+AGG | - | chr5_2:46640809-46640828 | None:intergenic | 35.0% |
| TTTGGTGAAAGAGAGAGAAA+GGG | - | chr5_2:46640879-46640898 | None:intergenic | 35.0% | |
| TCGAAATTAAGGTTAGGGTT+TGG | - | chr5_2:46640897-46640916 | None:intergenic | 35.0% | |
| TTTCGAATCAATCATTGCCA+TGG | + | chr5_2:46640911-46640930 | Msa0772310:intron | 35.0% | |
| AAACAATGACAACGAAGAAG+AGG | + | chr5_2:46641019-46641038 | Msa0772310:intron | 35.0% | |
| !! | CTTGTTCCATTGTTTTGTGA+AGG | + | chr5_2:46641097-46641116 | Msa0772310:intron | 35.0% |
| CCAAAACCTTCACAAAACAA+TGG | - | chr5_2:46641106-46641125 | None:intergenic | 35.0% | |
| !! | CCATTGTTTTGTGAAGGTTT+TGG | + | chr5_2:46641103-46641122 | Msa0772310:intron | 35.0% |
| !! | TTGTTTTGTGAAGGTTTTGG+TGG | + | chr5_2:46641106-46641125 | Msa0772310:intron | 35.0% |
| ! | GTTGAATAGTTGGTACAGAT+TGG | + | chr5_2:46641128-46641147 | Msa0772310:intron | 35.0% |
| AGAGAGTGAACATAATGTCA+AGG | + | chr5_2:46641369-46641388 | Msa0772310:intron | 35.0% | |
| !!! | CATAGTTTTAAAAACCGGAC+CGG | + | chr5_2:46641410-46641429 | Msa0772310:intron | 35.0% |
| TTTAATACGGTTCAGTCATG+CGG | - | chr5_2:46641501-46641520 | None:intergenic | 35.0% | |
| ! | TGCTTAAGACATTGGTTAAG+AGG | + | chr5_2:46641651-46641670 | Msa0772310:intron | 35.0% |
| ! | GCTGCATAACTTCATCATTT+TGG | - | chr5_2:46642010-46642029 | None:intergenic | 35.0% |
| AAATATAAACTGGAAGAGGC+TGG | - | chr5_2:46642064-46642083 | None:intergenic | 35.0% | |
| TGGAAAGAAATTTAGGGAAG+AGG | - | chr5_2:46642143-46642162 | None:intergenic | 35.0% | |
| TAACCATGGTGAAAAACTGA+AGG | - | chr5_2:46642181-46642200 | None:intergenic | 35.0% | |
| !!! | CATAGTTTTAAAAACCGGAC+CGG | - | chr5_2:46641410-46641429 | None:intergenic | 35.0% |
| ! | TCGGTGCAACTAATTGTTTT+TGG | - | chr5_2:46642571-46642590 | None:intergenic | 35.0% |
| CTACATTGTTGGTACATTTG+GGG | + | chr5_2:46642687-46642706 | Msa0772310:intron | 35.0% | |
| GACAAAGTAAACTTTCTAGG+CGG | - | chr5_2:46643095-46643114 | None:intergenic | 35.0% | |
| CCAGACAAAGTAAACTTTCT+AGG | - | chr5_2:46643098-46643117 | None:intergenic | 35.0% | |
| CCTAGAAAGTTTACTTTGTC+TGG | + | chr5_2:46643095-46643114 | Msa0772310:CDS | 35.0% | |
| AGCTAAGATTCTGAATGCTT+TGG | - | chr5_2:46643267-46643286 | None:intergenic | 35.0% | |
| ! | AGTAATTTGTCACACAACTG+AGG | - | chr5_2:46643511-46643530 | None:intergenic | 35.0% |
| ! | GCAATGTTTGCTTCTTTTAC+AGG | - | chr5_2:46643592-46643611 | None:intergenic | 35.0% |
| AGTTCCCTCTAGTATTGTAA+AGG | + | chr5_2:46643613-46643632 | Msa0772310:three_prime_UTR | 35.0% | |
| GCATACCTTTACAATACTAG+AGG | - | chr5_2:46643621-46643640 | None:intergenic | 35.0% | |
| CATAAACATGAGATCCCCAA+TGG | + | chr5_2:46636687-46636706 | Msa0772310:exon | 40.0% | |
| !! | ACATTGGTTCAGCATCATCA+TGG | + | chr5_2:46636737-46636756 | Msa0772310:CDS | 40.0% |
| CTTTGGCTGCATAGTAAAGA+TGG | - | chr5_2:46636942-46636961 | None:intergenic | 40.0% | |
| TGATGGAAAACAAGTAGTGG+AGG | + | chr5_2:46637047-46637066 | Msa0772310:CDS | 40.0% | |
| ATTCTATGCAATCTGGACCA+TGG | + | chr5_2:46637310-46637329 | Msa0772310:CDS | 40.0% | |
| GCAAGTGAATCAAATGAAGC+AGG | - | chr5_2:46637357-46637376 | None:intergenic | 40.0% | |
| TACTTATTGTATGGACCACC+AGG | + | chr5_2:46637477-46637496 | Msa0772310:CDS | 40.0% | |
| ! | AGACTAGATTTTCCAGTTCC+TGG | - | chr5_2:46637498-46637517 | None:intergenic | 40.0% |
| ACCAGACAAGTTTCCAGATA+TGG | + | chr5_2:46637683-46637702 | Msa0772310:CDS | 40.0% | |
| TCCATATCTGGAAACTTGTC+TGG | - | chr5_2:46637687-46637706 | None:intergenic | 40.0% | |
| GCTATGAGACACAAATGACA+TGG | - | chr5_2:46638291-46638310 | None:intergenic | 40.0% | |
| ! | CAATGGATTCGTTCAAACAG+TGG | - | chr5_2:46638317-46638336 | None:intergenic | 40.0% |
| CACTGTTTGAACGAATCCAT+TGG | + | chr5_2:46638315-46638334 | Msa0772310:intron | 40.0% | |
| GACTTATCAACTATGAAGCC+CGG | + | chr5_2:46638443-46638462 | Msa0772310:intron | 40.0% | |
| !! | ATACTTCTGGGATACGTATC+CGG | - | chr5_2:46638534-46638553 | None:intergenic | 40.0% |
| !! | ATACTTCTGGGATACGTATC+CGG | - | chr5_2:46638534-46638553 | None:intergenic | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr5_2:46638929-46638948 | Msa0772310:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | - | chr5_2:46639166-46639185 | None:intergenic | 40.0% | |
| ! | AAATCCTATAGGGGTTTGCT+AGG | + | chr5_2:46639053-46639072 | Msa0772310:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr5_2:46639166-46639185 | Msa0772310:intron | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr5_2:46638929-46638948 | None:intergenic | 40.0% |
| ! | ATTTAGGATACGTTACGGCT+TGG | - | chr5_2:46639264-46639283 | None:intergenic | 40.0% |
| CAGAGTCATTGTCTAATTGC+TGG | - | chr5_2:46639405-46639424 | None:intergenic | 40.0% | |
| TGACTGATGACTGATAAGCT+AGG | + | chr5_2:46639476-46639495 | Msa0772310:intron | 40.0% | |
| ! | GATAAGCTAGGTGAAGTGTT+TGG | + | chr5_2:46639488-46639507 | Msa0772310:intron | 40.0% |
| AAGGCAAGAGAGATAAATGG+AGG | + | chr5_2:46639779-46639798 | Msa0772310:intron | 40.0% | |
| CTATAAGCTCAAACGCTACT+TGG | + | chr5_2:46640104-46640123 | Msa0772310:intron | 40.0% | |
| ! | ACTAACGAAGGTGTACATGA+GGG | - | chr5_2:46640415-46640434 | None:intergenic | 40.0% |
| ! | TACTAACGAAGGTGTACATG+AGG | - | chr5_2:46640416-46640435 | None:intergenic | 40.0% |
| AGGACCACTATTACTAACGA+AGG | - | chr5_2:46640427-46640446 | None:intergenic | 40.0% | |
| TTAGTGGCAGTGGTTTGAAT+TGG | - | chr5_2:46640830-46640849 | None:intergenic | 40.0% | |
| GGCTATGGTGTGAAAATTAG+TGG | - | chr5_2:46640846-46640865 | None:intergenic | 40.0% | |
| AAGGGGAAAATTAGTGGCTA+TGG | - | chr5_2:46640861-46640880 | None:intergenic | 40.0% | |
| GAGAGAAAGGGGAAAATTAG+TGG | - | chr5_2:46640867-46640886 | None:intergenic | 40.0% | |
| TTGGTGAAAGAGAGAGAAAG+GGG | - | chr5_2:46640878-46640897 | None:intergenic | 40.0% | |
| ! | GTTTGGTGAAAGAGAGAGAA+AGG | - | chr5_2:46640880-46640899 | None:intergenic | 40.0% |
| AGATCGAAGCTTTCGTTTCT+TGG | - | chr5_2:46640937-46640956 | None:intergenic | 40.0% | |
| CAATGGAACAAGCTTTCAAG+AGG | - | chr5_2:46641089-46641108 | None:intergenic | 40.0% | |
| !! | GGTTTTGGTGGTTGAATAGT+TGG | + | chr5_2:46641118-46641137 | Msa0772310:intron | 40.0% |
| ! | ATAGTTGGTACAGATTGGGT+TGG | + | chr5_2:46641133-46641152 | Msa0772310:intron | 40.0% |
| ! | TAGTTGGTACAGATTGGGTT+GGG | + | chr5_2:46641134-46641153 | Msa0772310:intron | 40.0% |
| !! | ATTGACTCGGTAATACCACT+GGG | + | chr5_2:46641435-46641454 | Msa0772310:intron | 40.0% |
| TCAGATTAGATCGGATGACT+CGG | + | chr5_2:46641576-46641595 | Msa0772310:intron | 40.0% | |
| TCAGATTAGATCGGATGACT+CGG | + | chr5_2:46641576-46641595 | Msa0772310:intron | 40.0% | |
| !!! | GAAGGCTCGGTTTTAATTGA+TGG | - | chr5_2:46642163-46642182 | None:intergenic | 40.0% |
| ATGGTGAAAAACTGAAGGCT+CGG | - | chr5_2:46642176-46642195 | None:intergenic | 40.0% | |
| TCTGTTCTCTCTTCTTTCAC+TGG | + | chr5_2:46642207-46642226 | Msa0772310:intron | 40.0% | |
| AAAAATGCATTGAACCGGTC+TGG | + | chr5_2:46642256-46642275 | Msa0772310:intron | 40.0% | |
| !! | TTCTCACCGGTTCTATTACA+TGG | + | chr5_2:46642334-46642353 | Msa0772310:intron | 40.0% |
| GTTTGAGCTGAACTATGGAT+CGG | - | chr5_2:46642360-46642379 | None:intergenic | 40.0% | |
| ATCCATAGTTCAGCTCAAAC+CGG | + | chr5_2:46642360-46642379 | Msa0772310:intron | 40.0% | |
| !!! | CGGTCCGGTTTTTAAAACTA+TGG | + | chr5_2:46642426-46642445 | Msa0772310:intron | 40.0% |
| GGGGTTAAAGTTAACTGATG+TGG | + | chr5_2:46642706-46642725 | Msa0772310:intron | 40.0% | |
| ATGTGGATCAAACTGACTGA+CGG | + | chr5_2:46642723-46642742 | Msa0772310:intron | 40.0% | |
| GACTGACGGAACAAATTTGA+AGG | + | chr5_2:46642737-46642756 | Msa0772310:intron | 40.0% | |
| GTCTGGTCTGCTTAACTATA+TGG | + | chr5_2:46643112-46643131 | Msa0772310:CDS | 40.0% | |
| GGTCTGCTTAACTATATGGA+TGG | + | chr5_2:46643116-46643135 | Msa0772310:CDS | 40.0% | |
| !! | GATGGATTATGGTCAAGTTG+TGG | + | chr5_2:46643134-46643153 | Msa0772310:CDS | 40.0% |
| ! | ATTATGGTCAAGTTGTGGAG+AGG | + | chr5_2:46643139-46643158 | Msa0772310:CDS | 40.0% |
| CTGGGTCTACTTTGTCTTTA+TGG | - | chr5_2:46643190-46643209 | None:intergenic | 40.0% | |
| !! | CTTTGGCCTTAAGAAATGAC+AGG | - | chr5_2:46643250-46643269 | None:intergenic | 40.0% |
| AATTTGTCACACAACTGAGG+AGG | - | chr5_2:46643508-46643527 | None:intergenic | 40.0% | |
| GGGGATCTCATGTTTATGTG+TGG | - | chr5_2:46636685-46636704 | None:intergenic | 45.0% | |
| AAGAGAAACGACCAGCCATT+GGG | - | chr5_2:46636705-46636724 | None:intergenic | 45.0% | |
| ! | GTTGGTAAACCTTGGAAACG+TGG | + | chr5_2:46637453-46637472 | Msa0772310:CDS | 45.0% |
| ! | CTAGATTTTCCAGTTCCTGG+TGG | - | chr5_2:46637495-46637514 | None:intergenic | 45.0% |
| TTCAGGTCTAATGGTAGGTG+AGG | - | chr5_2:46638370-46638389 | None:intergenic | 45.0% | |
| TATCCGATACGTATCCGACA+CGG | - | chr5_2:46638491-46638510 | None:intergenic | 45.0% | |
| !! | TACTTCTGGGATACGTATCC+GGG | - | chr5_2:46638533-46638552 | None:intergenic | 45.0% |
| GGATACGTTAAGGATACTCC+CGG | + | chr5_2:46638603-46638622 | Msa0772310:intron | 45.0% | |
| !! | TACTTCTGGGATACGTATCC+GGG | - | chr5_2:46638533-46638552 | None:intergenic | 45.0% |
| CCTGCACTATGATGATACCA+AGG | - | chr5_2:46638759-46638778 | None:intergenic | 45.0% | |
| CCTTGGTATCATCATAGTGC+AGG | + | chr5_2:46638756-46638775 | Msa0772310:intron | 45.0% | |
| GTATCCTAGCAAACCCCTAT+AGG | - | chr5_2:46639060-46639079 | None:intergenic | 45.0% | |
| ATACGGGTACGATACGATAC+GGG | - | chr5_2:46639312-46639331 | None:intergenic | 45.0% | |
| GATACGGGTACGATACGATA+CGG | - | chr5_2:46639313-46639332 | None:intergenic | 45.0% | |
| TAAGCTATGAAGCCCCGATA+CGG | - | chr5_2:46639341-46639360 | None:intergenic | 45.0% | |
| !! | AATTGCTGGTTCTAGCAGAG+AGG | - | chr5_2:46639391-46639410 | None:intergenic | 45.0% |
| ACATTAACAGACTAACGGCG+AGG | - | chr5_2:46640447-46640466 | None:intergenic | 45.0% | |
| GGTGTGAAAATTAGTGGCAG+TGG | - | chr5_2:46640840-46640859 | None:intergenic | 45.0% | |
| AAGCTTTCGTTTCTTGGCCA+TGG | - | chr5_2:46640931-46640950 | None:intergenic | 45.0% | |
| ! | AGTTGGTACAGATTGGGTTG+GGG | + | chr5_2:46641135-46641154 | Msa0772310:intron | 45.0% |
| TAAGAGAAGGAACACGGATC+TGG | + | chr5_2:46641192-46641211 | Msa0772310:intron | 45.0% | |
| GGTGATTTGAGAGCTTGAGA+AGG | + | chr5_2:46641252-46641271 | Msa0772310:intron | 45.0% | |
| GGTATTACCGAGTCAATGAC+CGG | - | chr5_2:46641432-46641451 | None:intergenic | 45.0% | |
| !! | CATTGACTCGGTAATACCAC+TGG | + | chr5_2:46641434-46641453 | Msa0772310:intron | 45.0% |
| TATAAACTGGAAGAGGCTGG+CGG | - | chr5_2:46642061-46642080 | None:intergenic | 45.0% | |
| ! | GAGCCTTCAGTTTTTCACCA+TGG | + | chr5_2:46642175-46642194 | Msa0772310:intron | 45.0% |
| AGAACAGAGCACGTTAACCA+TGG | - | chr5_2:46642195-46642214 | None:intergenic | 45.0% | |
| !!! | TCACCGGTTTTAACCGGTTT+TGG | + | chr5_2:46642297-46642316 | Msa0772310:intron | 45.0% |
| TGGCCAAAACCGGTTAAAAC+CGG | - | chr5_2:46642303-46642322 | None:intergenic | 45.0% | |
| GATCGGCCATGTAATAGAAC+CGG | - | chr5_2:46642343-46642362 | None:intergenic | 45.0% | |
| !! | TTTTAAAAACCGGACCGGAC+CGG | - | chr5_2:46642423-46642442 | None:intergenic | 45.0% |
| TATGCATGTCCATACGACCA+GGG | - | chr5_2:46643223-46643242 | None:intergenic | 45.0% | |
| ATATGCATGTCCATACGACC+AGG | - | chr5_2:46643224-46643243 | None:intergenic | 45.0% | |
| GAAGATCCTGATGTTGCTCT+TGG | + | chr5_2:46643401-46643420 | Msa0772310:CDS | 45.0% | |
| !!! | TTATTTTATCAAATTATTAT+TGG | + | chr5_2:46638248-46638267 | Msa0772310:intron | 5.0% |
| !! | AAAAATTAAATTAAATCATT+CGG | - | chr5_2:46638557-46638576 | None:intergenic | 5.0% |
| !! | AAAAATTAAATTAAATCATT+TGG | - | chr5_2:46638557-46638576 | None:intergenic | 5.0% |
| !! | TTGAATTAAATTATAATAAA+AGG | + | chr5_2:46640017-46640036 | Msa0772310:intron | 5.0% |
| !! | TGAATTAAATTATAATAAAA+GGG | + | chr5_2:46640018-46640037 | Msa0772310:intron | 5.0% |
| !!! | TTTTAAATGTAAATTTTTTA+GGG | - | chr5_2:46641808-46641827 | None:intergenic | 5.0% |
| !!! | TTTTTAAATGTAAATTTTTT+AGG | - | chr5_2:46641809-46641828 | None:intergenic | 5.0% |
| !! | AAAAAATTTACATTTAAAAA+AGG | + | chr5_2:46641809-46641828 | Msa0772310:intron | 5.0% |
| AACATGAGATCCCCAATGGC+TGG | + | chr5_2:46636691-46636710 | Msa0772310:exon | 50.0% | |
| AGAGAAACGACCAGCCATTG+GGG | - | chr5_2:46636704-46636723 | None:intergenic | 50.0% | |
| GAAGAGAAACGACCAGCCAT+TGG | - | chr5_2:46636706-46636725 | None:intergenic | 50.0% | |
| TTGTATGGACCACCAGGAAC+TGG | + | chr5_2:46637483-46637502 | Msa0772310:CDS | 50.0% | |
| GAAGCCCGGATACTCCAAAA+TGG | + | chr5_2:46638457-46638476 | Msa0772310:intron | 50.0% | |
| !!! | GGCACCATTTTGGAGTATCC+GGG | - | chr5_2:46638464-46638483 | None:intergenic | 50.0% |
| !!! | CGGCACCATTTTGGAGTATC+CGG | - | chr5_2:46638465-46638484 | None:intergenic | 50.0% |
| ATACGTATCCGACACGGGTA+CGG | - | chr5_2:46638485-46638504 | None:intergenic | 50.0% | |
| TACCCGTGTCGGATACGTAT+CGG | + | chr5_2:46638485-46638504 | Msa0772310:intron | 50.0% | |
| ATCCGATACGTATCCGACAC+GGG | - | chr5_2:46638490-46638509 | None:intergenic | 50.0% | |
| TATCGGATACCGATACTCCG+CGG | + | chr5_2:46638502-46638521 | Msa0772310:intron | 50.0% | |
| ACCCGTATCCGTATCCGTAT+CGG | + | chr5_2:46639324-46639343 | Msa0772310:intron | 50.0% | |
| ATGAAGCCCCGATACGGATA+CGG | - | chr5_2:46639335-46639354 | None:intergenic | 50.0% | |
| GTGTACATGAGGGACCAAAC+AGG | - | chr5_2:46640405-46640424 | None:intergenic | 50.0% | |
| TAAACCTGAACCCACCGTGT+CGG | + | chr5_2:46640959-46640978 | Msa0772310:intron | 50.0% | |
| GGTAATACCACTGGGTCACT+GGG | + | chr5_2:46641443-46641462 | Msa0772310:intron | 50.0% | |
| TGGTTGAACCACTGAGTCAC+TGG | + | chr5_2:46641470-46641489 | Msa0772310:intron | 50.0% | |
| CTCCTCCCACTCTCTCATTT+CGG | + | chr5_2:46642032-46642051 | Msa0772310:intron | 50.0% | |
| TACCGAAATGAGAGAGTGGG+AGG | - | chr5_2:46642037-46642056 | None:intergenic | 50.0% | |
| GGCTACCGAAATGAGAGAGT+GGG | - | chr5_2:46642040-46642059 | None:intergenic | 50.0% | |
| ! | ACCGGTCTGGTTTAACGAAC+CGG | + | chr5_2:46642269-46642288 | Msa0772310:intron | 50.0% |
| ACCGGTTAAAACCGGTGACT+CGG | - | chr5_2:46642295-46642314 | None:intergenic | 50.0% | |
| !! | GACCGGTTTGAGCTGAACTA+TGG | - | chr5_2:46642365-46642384 | None:intergenic | 50.0% |
| AGGGGACGGCTAGATTATAG+AGG | - | chr5_2:46642607-46642626 | None:intergenic | 50.0% | |
| CGGTGGACCATCTACATTGT+TGG | + | chr5_2:46642676-46642695 | Msa0772310:intron | 50.0% | |
| ! | TAGTGGCAGAGCATCTGTTG+AGG | + | chr5_2:46643375-46643394 | Msa0772310:CDS | 50.0% |
| AGTGCTCCAAGAGCAACATC+AGG | - | chr5_2:46643410-46643429 | None:intergenic | 50.0% | |
| CCTCTTCGCACGCATTCCAA+TGG | - | chr5_2:46638334-46638353 | None:intergenic | 55.0% | |
| CCATTGGAATGCGTGCGAAG+AGG | + | chr5_2:46638331-46638350 | Msa0772310:intron | 55.0% | |
| TGGTAGGTGAGGCAGCAAGT+GGG | - | chr5_2:46638359-46638378 | None:intergenic | 55.0% | |
| ATGGTAGGTGAGGCAGCAAG+TGG | - | chr5_2:46638360-46638379 | None:intergenic | 55.0% | |
| ! | ACACGGGTACGGCACCATTT+TGG | - | chr5_2:46638474-46638493 | None:intergenic | 55.0% |
| !! | AAATGGTGCCGTACCCGTGT+CGG | + | chr5_2:46638474-46638493 | Msa0772310:intron | 55.0% |
| !! | TACGTATCCGGGAGTATCCG+CGG | - | chr5_2:46638522-46638541 | None:intergenic | 55.0% |
| CCCGATACGGATACGGATAC+GGG | - | chr5_2:46639328-46639347 | None:intergenic | 55.0% | |
| CCCGTATCCGTATCCGTATC+GGG | + | chr5_2:46639325-46639344 | Msa0772310:intron | 55.0% | |
| CCCCGATACGGATACGGATA+CGG | - | chr5_2:46639329-46639348 | None:intergenic | 55.0% | |
| CCGTATCCGTATCCGTATCG+GGG | + | chr5_2:46639326-46639345 | Msa0772310:intron | 55.0% | |
| GCTGTGACGACGGAAGCTAA+CGG | + | chr5_2:46640987-46641006 | Msa0772310:intron | 55.0% | |
| ! | AACCGGACCGGTCATTGACT+CGG | + | chr5_2:46641422-46641441 | Msa0772310:intron | 55.0% |
| TACCGAGTCAATGACCGGTC+CGG | - | chr5_2:46641427-46641446 | None:intergenic | 55.0% | |
| CGGTAATACCACTGGGTCAC+TGG | + | chr5_2:46641442-46641461 | Msa0772310:intron | 55.0% | |
| CGGTTCAACCAGTGACTCAG+TGG | - | chr5_2:46641481-46641500 | None:intergenic | 55.0% | |
| CTCTACGTGGGCCTTTAGCT+TGG | - | chr5_2:46641944-46641963 | None:intergenic | 55.0% | |
| CGAAATGAGAGAGTGGGAGG+AGG | - | chr5_2:46642034-46642053 | None:intergenic | 55.0% | |
| CGGCTACCGAAATGAGAGAG+TGG | - | chr5_2:46642041-46642060 | None:intergenic | 55.0% | |
| !! | GCCGGTTCGTTAAACCAGAC+CGG | - | chr5_2:46642273-46642292 | None:intergenic | 55.0% |
| ! | GTTAAAACCGGTGACTCGGC+CGG | - | chr5_2:46642291-46642310 | None:intergenic | 55.0% |
| !!! | GCCGAGTCACCGGTTTTAAC+CGG | + | chr5_2:46642291-46642310 | Msa0772310:intron | 55.0% |
| GCTCAAACCGGTCATACCAC+CGG | + | chr5_2:46642372-46642391 | Msa0772310:intron | 55.0% | |
| ATTGTTGCGCCCTGGTCGTA+TGG | + | chr5_2:46643211-46643230 | Msa0772310:CDS | 55.0% | |
| AGATGTCACCCCTGCTGTAG+TGG | + | chr5_2:46643358-46643377 | Msa0772310:CDS | 55.0% | |
| ATGCTCTGCCACTACAGCAG+GGG | - | chr5_2:46643369-46643388 | None:intergenic | 55.0% | |
| GATGCTCTGCCACTACAGCA+GGG | - | chr5_2:46643370-46643389 | None:intergenic | 55.0% | |
| AGATGCTCTGCCACTACAGC+AGG | - | chr5_2:46643371-46643390 | None:intergenic | 55.0% | |
| !! | CGGGAGTATCCGCGGAGTAT+CGG | - | chr5_2:46638514-46638533 | None:intergenic | 60.0% |
| CGATACTCCGCGGATACTCC+CGG | + | chr5_2:46638512-46638531 | Msa0772310:intron | 60.0% | |
| ! | TACTCCGACACGGTGGGTTC+AGG | - | chr5_2:46640966-46640985 | None:intergenic | 60.0% |
| TGAACCCACCGTGTCGGAGT+AGG | + | chr5_2:46640965-46640984 | Msa0772310:intron | 60.0% | |
| ACAGCCTACTCCGACACGGT+GGG | - | chr5_2:46640972-46640991 | None:intergenic | 60.0% | |
| CGTCACAGCCTACTCCGACA+CGG | - | chr5_2:46640976-46640995 | None:intergenic | 60.0% | |
| GTCGGAGTAGGCTGTGACGA+CGG | + | chr5_2:46640977-46640996 | Msa0772310:intron | 60.0% | |
| GTGACGACGGAAGCTAACGG+TGG | + | chr5_2:46640990-46641009 | Msa0772310:intron | 60.0% | |
| ACGACGGAAGCTAACGGTGG+TGG | + | chr5_2:46640993-46641012 | Msa0772310:intron | 60.0% | |
| CGACGGAAGCTAACGGTGGT+GGG | + | chr5_2:46640994-46641013 | Msa0772310:intron | 60.0% | |
| GACGGAAGCTAACGGTGGTG+GGG | + | chr5_2:46640995-46641014 | Msa0772310:intron | 60.0% | |
| CCAATGACCCAGTGACCCAG+TGG | - | chr5_2:46641453-46641472 | None:intergenic | 60.0% | |
| CCACTGGGTCACTGGGTCAT+TGG | + | chr5_2:46641450-46641469 | Msa0772310:intron | 60.0% | |
| TAACGAACCGGCCGAGTCAC+CGG | + | chr5_2:46642281-46642300 | Msa0772310:intron | 60.0% | |
| ! | CGCTGCGACTTGGCCAAAAC+CGG | - | chr5_2:46642313-46642332 | None:intergenic | 60.0% |
| !! | CGGTTTTGGCCAAGTCGCAG+CGG | + | chr5_2:46642311-46642330 | Msa0772310:intron | 60.0% |
| CAAGTCGCAGCGGTTCTCAC+CGG | + | chr5_2:46642321-46642340 | Msa0772310:intron | 60.0% | |
| GACCAGGGCGCAACAATGCT+GGG | - | chr5_2:46643208-46643227 | None:intergenic | 60.0% | |
| CACAGCCTACTCCGACACGG+TGG | - | chr5_2:46640973-46640992 | None:intergenic | 65.0% | |
| CGGTGAGAACCGCTGCGACT+TGG | - | chr5_2:46642323-46642342 | None:intergenic | 65.0% | |
| CCGGGAACCGGTGGTATGAC+CGG | - | chr5_2:46642382-46642401 | None:intergenic | 65.0% | |
| !! | CCGGTCATACCACCGGTTCC+CGG | + | chr5_2:46642379-46642398 | Msa0772310:intron | 65.0% |
| AAAAACCGGACCGGACCGGC+CGG | - | chr5_2:46642419-46642438 | None:intergenic | 65.0% | |
| GACCCAGCATTGTTGCGCCC+TGG | + | chr5_2:46643203-46643222 | Msa0772310:CDS | 65.0% | |
| CGACCAGGGCGCAACAATGC+TGG | - | chr5_2:46643209-46643228 | None:intergenic | 65.0% | |
| GAACCGGTCGGACCGGGAAC+CGG | - | chr5_2:46642394-46642413 | None:intergenic | 70.0% | |
| CCGGTTGAACCGGTCGGACC+GGG | - | chr5_2:46642400-46642419 | None:intergenic | 70.0% | |
| ! | CCCGGTCCGACCGGTTCAAC+CGG | + | chr5_2:46642397-46642416 | Msa0772310:intron | 70.0% |
| GCCGGTTGAACCGGTCGGAC+CGG | - | chr5_2:46642401-46642420 | None:intergenic | 70.0% | |
| ! | GTCCGACCGGTTCAACCGGC+CGG | + | chr5_2:46642401-46642420 | Msa0772310:intron | 70.0% |
| GACCGGCCGGTTGAACCGGT+CGG | - | chr5_2:46642406-46642425 | None:intergenic | 70.0% | |
| ! | ACCGGTTCAACCGGCCGGTC+CGG | + | chr5_2:46642406-46642425 | Msa0772310:intron | 70.0% |
| ACCGGACCGGCCGGTTGAAC+CGG | - | chr5_2:46642410-46642429 | None:intergenic | 70.0% | |
| TTCAACCGGCCGGTCCGGTC+CGG | + | chr5_2:46642411-46642430 | Msa0772310:intron | 70.0% | |
| !! | CCACCGGTTCCCGGTCCGAC+CGG | + | chr5_2:46642388-46642407 | Msa0772310:intron | 75.0% |
| ! | CCGGTCGGACCGGGAACCGG+TGG | - | chr5_2:46642391-46642410 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 46636529 | 46643845 | 46636529 | ID=Msa0772310;Name=Msa0772310 |
| chr5_2 | mRNA | 46636529 | 46643845 | 46636529 | ID=Msa0772310-mRNA-1;Parent=Msa0772310;Name=Msa0772310-mRNA-1;_AED=0.05;_eAED=0.05;_QI=165|1|1|1|1|1|2|343|485 |
| chr5_2 | exon | 46636529 | 46637725 | 46636529 | ID=Msa0772310-mRNA-1:exon:13916;Parent=Msa0772310-mRNA-1 |
| chr5_2 | exon | 46643077 | 46643845 | 46643077 | ID=Msa0772310-mRNA-1:exon:13917;Parent=Msa0772310-mRNA-1 |
| chr5_2 | five_prime_UTR | 46636529 | 46636693 | 46636529 | ID=Msa0772310-mRNA-1:five_prime_utr;Parent=Msa0772310-mRNA-1 |
| chr5_2 | CDS | 46636694 | 46637725 | 46636694 | ID=Msa0772310-mRNA-1:cds;Parent=Msa0772310-mRNA-1 |
| chr5_2 | CDS | 46643077 | 46643502 | 46643077 | ID=Msa0772310-mRNA-1:cds;Parent=Msa0772310-mRNA-1 |
| chr5_2 | three_prime_UTR | 46643503 | 46643845 | 46643503 | ID=Msa0772310-mRNA-1:three_prime_utr;Parent=Msa0772310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
