Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407900 | XP_003612072.1 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407900 | sp|Q8GW96|AATP3_ARATH | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.83e-133 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407900 | G7KF10 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1407900 | -0.833918 | 4.047099e-56 | -8.615850e-47 |
| Msa0018110 | Msa1407900 | -0.803449 | 3.467366e-49 | -8.615850e-47 |
| Msa0042210 | Msa1407900 | -0.808764 | 2.638251e-50 | -8.615850e-47 |
| Msa0047560 | Msa1407900 | -0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0047660 | Msa1407900 | -0.810369 | 1.193102e-50 | -8.615850e-47 |
| Msa0052180 | Msa1407900 | -0.811591 | 6.483529e-51 | -8.615850e-47 |
| Msa0065520 | Msa1407900 | -0.811044 | 8.525062e-51 | -8.615850e-47 |
| Msa0075080 | Msa1407900 | -0.832512 | 9.060233e-56 | -8.615850e-47 |
| Msa0076590 | Msa1407900 | -0.812568 | 3.971906e-51 | -8.615850e-47 |
| Msa0076990 | Msa1407900 | -0.803360 | 3.618616e-49 | -8.615850e-47 |
| Msa0078160 | Msa1407900 | -0.806095 | 9.714318e-50 | -8.615850e-47 |
| Msa0079100 | Msa1407900 | -0.814226 | 1.715835e-51 | -8.615850e-47 |
| Msa0086620 | Msa1407900 | -0.825128 | 5.549101e-54 | -8.615850e-47 |
| Msa0093360 | Msa1407900 | -0.803998 | 2.667022e-49 | -8.615850e-47 |
| Msa0095890 | Msa1407900 | -0.831567 | 1.551934e-55 | -8.615850e-47 |
| Msa0097220 | Msa1407900 | -0.801334 | 9.457100e-49 | -8.615850e-47 |
| Msa0120100 | Msa1407900 | -0.801943 | 7.093357e-49 | -8.615850e-47 |
| Msa1353040 | Msa1407900 | -0.801887 | 7.281801e-49 | -8.615850e-47 |
| Msa1363170 | Msa1407900 | -0.809627 | 1.723170e-50 | -8.615850e-47 |
| Msa1373930 | Msa1407900 | -0.809181 | 2.148271e-50 | -8.615850e-47 |
| Msa1375120 | Msa1407900 | -0.804779 | 1.834123e-49 | -8.615850e-47 |
| Msa1375570 | Msa1407900 | -0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa1375650 | Msa1407900 | -0.813712 | 2.227348e-51 | -8.615850e-47 |
| Msa1376510 | Msa1407900 | -0.806274 | 8.905739e-50 | -8.615850e-47 |
| Msa1379000 | Msa1407900 | 0.952819 | 1.060958e-110 | -8.615850e-47 |
| Msa1381060 | Msa1407900 | -0.814111 | 1.819399e-51 | -8.615850e-47 |
| Msa1388010 | Msa1407900 | -0.802646 | 5.083523e-49 | -8.615850e-47 |
| Msa1407900 | Msa1408230 | -0.809158 | 2.172405e-50 | -8.615850e-47 |
| Msa1407900 | Msa1412330 | -0.831773 | 1.380239e-55 | -8.615850e-47 |
| Msa1407900 | Msa1412810 | -0.807836 | 4.161044e-50 | -8.615850e-47 |
| Msa1407900 | Msa1417270 | 0.952204 | 4.008629e-110 | -8.615850e-47 |
| Msa1407900 | Msa1429180 | -0.810308 | 1.229481e-50 | -8.615850e-47 |
| Msa1407900 | Msa1432360 | 0.831580 | 1.540179e-55 | -8.615850e-47 |
| Msa1407900 | Msa1439000 | -0.801002 | 1.105594e-48 | -8.615850e-47 |
| Msa1407900 | Msa1447140 | 0.808097 | 3.662110e-50 | -8.615850e-47 |
| Msa1407900 | Msa1460340 | -0.808277 | 3.351479e-50 | -8.615850e-47 |
| Msa1407900 | Msa1462700 | -0.814982 | 1.167343e-51 | -8.615850e-47 |
| Msa0615460 | Msa1407900 | -0.817357 | 3.438423e-52 | -8.615850e-47 |
| Msa0616570 | Msa1407900 | -0.805724 | 1.162533e-49 | -8.615850e-47 |
| Msa0622450 | Msa1407900 | -0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa0629140 | Msa1407900 | 0.806702 | 7.235884e-50 | -8.615850e-47 |
| Msa0644220 | Msa1407900 | -0.848841 | 4.738661e-60 | -8.615850e-47 |
| Msa0649140 | Msa1407900 | -0.802088 | 6.622441e-49 | -8.615850e-47 |
| Msa0654560 | Msa1407900 | -0.824962 | 6.074166e-54 | -8.615850e-47 |
| Msa0654850 | Msa1407900 | -0.815384 | 9.504966e-52 | -8.615850e-47 |
| Msa0655980 | Msa1407900 | -0.803518 | 3.354803e-49 | -8.615850e-47 |
| Msa0666950 | Msa1407900 | 0.805810 | 1.115101e-49 | -8.615850e-47 |
| Msa0681100 | Msa1407900 | -0.804250 | 2.364566e-49 | -8.615850e-47 |
| Msa0684030 | Msa1407900 | -0.831635 | 1.493189e-55 | -8.615850e-47 |
| Msa0698510 | Msa1407900 | -0.813943 | 1.981561e-51 | -8.615850e-47 |
| Msa0698680 | Msa1407900 | -0.807029 | 6.172164e-50 | -8.615850e-47 |
| Msa0699900 | Msa1407900 | -0.809070 | 2.269200e-50 | -8.615850e-47 |
| Msa0713570 | Msa1407900 | -0.803945 | 2.735412e-49 | -8.615850e-47 |
| Msa0745010 | Msa1407900 | -0.821477 | 3.953775e-53 | -8.615850e-47 |
| Msa0750200 | Msa1407900 | -0.830228 | 3.305578e-55 | -8.615850e-47 |
| Msa0753590 | Msa1407900 | -0.850859 | 1.293006e-60 | -8.615850e-47 |
| Msa0755550 | Msa1407900 | -0.801967 | 7.013539e-49 | -8.615850e-47 |
| Msa0772310 | Msa1407900 | 0.821377 | 4.171586e-53 | -8.615850e-47 |
| Msa0784780 | Msa1407900 | -0.806227 | 9.114575e-50 | -8.615850e-47 |
| Msa0792490 | Msa1407900 | -0.809134 | 2.198235e-50 | -8.615850e-47 |
| Msa0793270 | Msa1407900 | 0.806046 | 9.947523e-50 | -8.615850e-47 |
| Msa0794900 | Msa1407900 | -0.800884 | 1.169041e-48 | -8.615850e-47 |
| Msa0810420 | Msa1407900 | 0.953549 | 2.148226e-111 | -8.615850e-47 |
| Msa0825960 | Msa1407900 | -0.814583 | 1.430628e-51 | -8.615850e-47 |
| Msa0833200 | Msa1407900 | -0.830910 | 2.249971e-55 | -8.615850e-47 |
| Msa0835050 | Msa1407900 | -0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0122930 | Msa1407900 | -0.838777 | 2.350631e-57 | -8.615850e-47 |
| Msa0124460 | Msa1407900 | -0.800311 | 1.529304e-48 | -8.615850e-47 |
| Msa0162720 | Msa1407900 | 0.820765 | 5.768539e-53 | -8.615850e-47 |
| Msa0167570 | Msa1407900 | -0.822929 | 1.821100e-53 | -8.615850e-47 |
| Msa0185540 | Msa1407900 | -0.832107 | 1.141832e-55 | -8.615850e-47 |
| Msa0188670 | Msa1407900 | -0.803309 | 3.706608e-49 | -8.615850e-47 |
| Msa0191180 | Msa1407900 | -0.811500 | 6.785978e-51 | -8.615850e-47 |
| Msa0191470 | Msa1407900 | 0.801374 | 9.281797e-49 | -8.615850e-47 |
| Msa0211590 | Msa1407900 | -0.821291 | 4.366439e-53 | -8.615850e-47 |
| Msa0213590 | Msa1407900 | -0.812287 | 4.574524e-51 | -8.615850e-47 |
| Msa0224180 | Msa1407900 | -0.801848 | 7.418822e-49 | -8.615850e-47 |
| Msa0225080 | Msa1407900 | -0.801838 | 7.452921e-49 | -8.615850e-47 |
| Msa1266750 | Msa1407900 | -0.806692 | 7.270700e-50 | -8.615850e-47 |
| Msa1269730 | Msa1407900 | -0.826265 | 2.981992e-54 | -8.615850e-47 |
| Msa1297550 | Msa1407900 | -0.809066 | 2.273221e-50 | -8.615850e-47 |
| Msa1303690 | Msa1407900 | -0.807293 | 5.424343e-50 | -8.615850e-47 |
| Msa1325260 | Msa1407900 | -0.820539 | 6.503571e-53 | -8.615850e-47 |
| Msa1330080 | Msa1407900 | -0.805390 | 1.366186e-49 | -8.615850e-47 |
| Msa0367380 | Msa1407900 | -0.825733 | 3.991107e-54 | -8.615850e-47 |
| Msa0367600 | Msa1407900 | -0.820753 | 5.807125e-53 | -8.615850e-47 |
| Msa0380470 | Msa1407900 | -0.815197 | 1.045915e-51 | -8.615850e-47 |
| Msa0382050 | Msa1407900 | -0.826799 | 2.224218e-54 | -8.615850e-47 |
| Msa0386230 | Msa1407900 | -0.816998 | 4.140672e-52 | -8.615850e-47 |
| Msa0393880 | Msa1407900 | -0.824825 | 6.542679e-54 | -8.615850e-47 |
| Msa0415210 | Msa1407900 | -0.814006 | 1.919202e-51 | -8.615850e-47 |
| Msa0424220 | Msa1407900 | -0.802001 | 6.901332e-49 | -8.615850e-47 |
| Msa0425810 | Msa1407900 | -0.814797 | 1.283075e-51 | -8.615850e-47 |
| Msa0428280 | Msa1407900 | -0.804056 | 2.594724e-49 | -8.615850e-47 |
| Msa0428300 | Msa1407900 | -0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0429990 | Msa1407900 | -0.808492 | 3.015366e-50 | -8.615850e-47 |
| Msa0431270 | Msa1407900 | -0.802676 | 5.011048e-49 | -8.615850e-47 |
| Msa0431550 | Msa1407900 | -0.826558 | 2.540317e-54 | -8.615850e-47 |
| Msa0436660 | Msa1407900 | -0.809850 | 1.542931e-50 | -8.615850e-47 |
| Msa0439090 | Msa1407900 | -0.814182 | 1.755179e-51 | -8.615850e-47 |
| Msa0440720 | Msa1407900 | -0.801845 | 7.428895e-49 | -8.615850e-47 |
| Msa0446110 | Msa1407900 | -0.814260 | 1.686307e-51 | -8.615850e-47 |
| Msa0472570 | Msa1407900 | -0.815380 | 9.523375e-52 | -8.615850e-47 |
| Msa0474660 | Msa1407900 | -0.803168 | 3.964389e-49 | -8.615850e-47 |
| Msa0476140 | Msa1407900 | -0.813710 | 2.230460e-51 | -8.615850e-47 |
| Msa0476560 | Msa1407900 | -0.828554 | 8.428992e-55 | -8.615850e-47 |
| Msa0479890 | Msa1407900 | -0.813806 | 2.124147e-51 | -8.615850e-47 |
| Msa0985570 | Msa1407900 | -0.814951 | 1.186063e-51 | -8.615850e-47 |
| Msa1002550 | Msa1407900 | -0.825383 | 4.831214e-54 | -8.615850e-47 |
| Msa1027910 | Msa1407900 | 0.814749 | 1.314683e-51 | -8.615850e-47 |
| Msa1028890 | Msa1407900 | -0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa1031190 | Msa1407900 | -0.807867 | 4.097391e-50 | -8.615850e-47 |
| Msa1036260 | Msa1407900 | -0.826352 | 2.843637e-54 | -8.615850e-47 |
| Msa1037440 | Msa1407900 | -0.809564 | 1.778061e-50 | -8.615850e-47 |
| Msa1045750 | Msa1407900 | -0.822484 | 2.311684e-53 | -8.615850e-47 |
| Msa1058550 | Msa1407900 | -0.821837 | 3.265246e-53 | -8.615850e-47 |
| Msa1068010 | Msa1407900 | -0.814541 | 1.461739e-51 | -8.615850e-47 |
| Msa1070370 | Msa1407900 | -0.807933 | 3.968059e-50 | -8.615850e-47 |
| Msa1076530 | Msa1407900 | -0.801090 | 1.060831e-48 | -8.615850e-47 |
| Msa1078120 | Msa1407900 | -0.809729 | 1.638267e-50 | -8.615850e-47 |
| Msa1084890 | Msa1407900 | 0.808626 | 2.824228e-50 | -8.615850e-47 |
| Msa1091400 | Msa1407900 | -0.813113 | 3.017270e-51 | -8.615850e-47 |
| Msa1095880 | Msa1407900 | -0.809980 | 1.446689e-50 | -8.615850e-47 |
| Msa0266330 | Msa1407900 | -0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0292060 | Msa1407900 | -0.805804 | 1.118299e-49 | -8.615850e-47 |
| Msa0322480 | Msa1407900 | -0.800908 | 1.155754e-48 | -8.615850e-47 |
| Msa0341950 | Msa1407900 | -0.811015 | 8.649154e-51 | -8.615850e-47 |
| Msa0347280 | Msa1407900 | -0.807806 | 4.222317e-50 | -8.615850e-47 |
| Msa1119420 | Msa1407900 | -0.803386 | 3.573249e-49 | -8.615850e-47 |
| Msa1122710 | Msa1407900 | -0.802051 | 6.740943e-49 | -8.615850e-47 |
| Msa1130150 | Msa1407900 | -0.827337 | 1.653903e-54 | -8.615850e-47 |
| Msa1134800 | Msa1407900 | -0.816067 | 6.693860e-52 | -8.615850e-47 |
| Msa1148100 | Msa1407900 | -0.802881 | 4.544570e-49 | -8.615850e-47 |
| Msa1156100 | Msa1407900 | -0.821579 | 3.745210e-53 | -8.615850e-47 |
| Msa1156430 | Msa1407900 | -0.810228 | 1.279245e-50 | -8.615850e-47 |
| Msa1158180 | Msa1407900 | -0.805149 | 1.534241e-49 | -8.615850e-47 |
| Msa1190670 | Msa1407900 | -0.802018 | 6.844829e-49 | -8.615850e-47 |
| Msa1199700 | Msa1407900 | -0.801908 | 7.212726e-49 | -8.615850e-47 |
| Msa1203320 | Msa1407900 | -0.820113 | 8.142286e-53 | -8.615850e-47 |
| Msa0484590 | Msa1407900 | -0.819093 | 1.391845e-52 | -8.615850e-47 |
| Msa0487480 | Msa1407900 | -0.812837 | 3.466833e-51 | -8.615850e-47 |
| Msa0489330 | Msa1407900 | -0.807038 | 6.144129e-50 | -8.615850e-47 |
| Msa0492330 | Msa1407900 | -0.818997 | 1.463399e-52 | -8.615850e-47 |
| Msa0500580 | Msa1407900 | -0.820815 | 5.618707e-53 | -8.615850e-47 |
| Msa0506700 | Msa1407900 | -0.803591 | 3.239711e-49 | -8.615850e-47 |
| Msa0514630 | Msa1407900 | -0.801233 | 9.919950e-49 | -8.615850e-47 |
| Msa0519090 | Msa1407900 | -0.815800 | 7.677661e-52 | -8.615850e-47 |
| Msa0519100 | Msa1407900 | -0.800434 | 1.443907e-48 | -8.615850e-47 |
| Msa0523600 | Msa1407900 | -0.812181 | 4.823357e-51 | -8.615850e-47 |
| Msa0528180 | Msa1407900 | 0.820801 | 5.659987e-53 | -8.615850e-47 |
| Msa0558570 | Msa1407900 | 0.806609 | 7.569643e-50 | -8.615850e-47 |
| Msa0561450 | Msa1407900 | -0.804494 | 2.102365e-49 | -8.615850e-47 |
| Msa0580890 | Msa1407900 | -0.810534 | 1.098734e-50 | -8.615850e-47 |
| Msa0589000 | Msa1407900 | 0.807730 | 4.382559e-50 | -8.615850e-47 |
| Msa0589060 | Msa1407900 | 0.808477 | 3.037546e-50 | -8.615850e-47 |
| Msa0858250 | Msa1407900 | -0.810419 | 1.163348e-50 | -8.615850e-47 |
| Msa0868500 | Msa1407900 | -0.821560 | 3.783631e-53 | -8.615850e-47 |
| Msa0868510 | Msa1407900 | -0.807701 | 4.444700e-50 | -8.615850e-47 |
| Msa0868520 | Msa1407900 | -0.800860 | 1.182270e-48 | -8.615850e-47 |
| Msa0935840 | Msa1407900 | -0.810360 | 1.198340e-50 | -8.615850e-47 |
| Msa0941410 | Msa1407900 | -0.815341 | 9.715681e-52 | -8.615850e-47 |
| Msa0941420 | Msa1407900 | -0.802658 | 5.053200e-49 | -8.615850e-47 |
| Msa0958960 | Msa1407900 | -0.831818 | 1.345140e-55 | -8.615850e-47 |
| Msa0968970 | Msa1407900 | -0.801327 | 9.487997e-49 | -8.615850e-47 |
| Msa0973010 | Msa1407900 | -0.832162 | 1.106182e-55 | -8.615850e-47 |
| Msa0978540 | Msa1407900 | -0.810447 | 1.147682e-50 | -8.615850e-47 |
| Msa0978550 | Msa1407900 | -0.805158 | 1.527736e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407900 | MtrunA17_Chr5g0404661 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Msa1407900 | MtrunA17_Chr3g0134831 | 79.522 | 293 | 57 | 2 | 182 | 472 | 1 | 292 | 9.33e-172 | 484 |
| Msa1407900 | MtrunA17_Chr5g0404651 | 40.764 | 471 | 241 | 8 | 18 | 473 | 9 | 456 | 1.44e-123 | 370 |
| Msa1407900 | MtrunA17_Chr8g0372701 | 41.075 | 465 | 235 | 6 | 14 | 466 | 15 | 452 | 1.99e-121 | 364 |
| Msa1407900 | MtrunA17_Chr2g0315911 | 41.957 | 460 | 227 | 8 | 33 | 484 | 21 | 448 | 3.70e-117 | 352 |
| Msa1407900 | MtrunA17_Chr2g0315981 | 41.667 | 456 | 234 | 8 | 33 | 479 | 14 | 446 | 9.39e-113 | 340 |
| Msa1407900 | MtrunA17_Chr2g0315921 | 41.573 | 445 | 225 | 8 | 33 | 467 | 19 | 438 | 1.11e-112 | 340 |
| Msa1407900 | MtrunA17_Chr2g0315991 | 41.593 | 452 | 229 | 8 | 33 | 479 | 20 | 441 | 2.25e-112 | 340 |
| Msa1407900 | MtrunA17_Chr2g0315971 | 41.447 | 456 | 232 | 7 | 33 | 481 | 14 | 441 | 2.34e-111 | 345 |
| Msa1407900 | MtrunA17_Chr2g0315971 | 51.095 | 274 | 119 | 3 | 196 | 467 | 443 | 703 | 1.25e-82 | 270 |
| Msa1407900 | MtrunA17_Chr2g0316041 | 41.809 | 409 | 205 | 6 | 80 | 479 | 2 | 386 | 1.13e-100 | 309 |
| Msa1407900 | MtrunA17_Chr1g0155131 | 38.562 | 459 | 254 | 8 | 23 | 467 | 7 | 451 | 5.92e-97 | 300 |
| Msa1407900 | MtrunA17_Chr2g0316021 | 37.744 | 461 | 216 | 8 | 33 | 484 | 14 | 412 | 9.75e-97 | 298 |
| Msa1407900 | MtrunA17_Chr2g0292561 | 37.885 | 454 | 259 | 8 | 23 | 467 | 10 | 449 | 6.33e-96 | 297 |
| Msa1407900 | MtrunA17_Chr6g0452401 | 37.744 | 461 | 234 | 9 | 43 | 467 | 5 | 448 | 1.18e-93 | 292 |
| Msa1407900 | MtrunA17_Chr6g0452451 | 38.034 | 468 | 250 | 10 | 27 | 466 | 13 | 468 | 1.48e-93 | 293 |
| Msa1407900 | MtrunA17_Chr7g0215951 | 36.943 | 471 | 257 | 8 | 22 | 467 | 5 | 460 | 1.13e-91 | 288 |
| Msa1407900 | MtrunA17_Chr6g0452391 | 37.045 | 467 | 259 | 9 | 24 | 467 | 5 | 459 | 6.57e-91 | 286 |
| Msa1407900 | MtrunA17_Chr6g0452411 | 41.534 | 378 | 181 | 7 | 118 | 467 | 1 | 366 | 4.03e-90 | 281 |
| Msa1407900 | MtrunA17_Chr6g0452371 | 37.045 | 467 | 259 | 8 | 24 | 467 | 7 | 461 | 4.67e-89 | 281 |
| Msa1407900 | MtrunA17_Chr4g0059811 | 34.325 | 504 | 270 | 13 | 22 | 485 | 10 | 492 | 3.60e-87 | 276 |
| Msa1407900 | MtrunA17_Chr1g0155121 | 37.650 | 417 | 212 | 8 | 81 | 467 | 63 | 461 | 3.35e-86 | 273 |
| Msa1407900 | MtrunA17_Chr6g0466811 | 39.394 | 396 | 204 | 8 | 84 | 467 | 80 | 451 | 1.29e-85 | 272 |
| Msa1407900 | MtrunA17_Chr2g0308991 | 37.740 | 416 | 218 | 10 | 83 | 483 | 67 | 456 | 4.10e-85 | 271 |
| Msa1407900 | MtrunA17_Chr4g0072491 | 34.573 | 457 | 256 | 8 | 20 | 452 | 6 | 443 | 5.61e-85 | 271 |
| Msa1407900 | MtrunA17_Chr6g0452361 | 49.587 | 242 | 108 | 3 | 229 | 467 | 1 | 231 | 3.54e-73 | 232 |
| Msa1407900 | MtrunA17_Chr5g0404671 | 85.366 | 123 | 18 | 0 | 363 | 485 | 1 | 123 | 1.43e-69 | 219 |
| Msa1407900 | MtrunA17_Chr7g0276031 | 34.066 | 364 | 184 | 9 | 109 | 467 | 93 | 405 | 4.18e-66 | 220 |
| Msa1407900 | MtrunA17_Chr3g0127381 | 35.342 | 365 | 180 | 10 | 112 | 467 | 97 | 414 | 4.26e-66 | 221 |
| Msa1407900 | MtrunA17_Chr5g0404681 | 77.778 | 126 | 27 | 1 | 158 | 283 | 28 | 152 | 7.02e-66 | 209 |
| Msa1407900 | MtrunA17_Chr5g0404691 | 63.158 | 171 | 46 | 2 | 302 | 472 | 1 | 154 | 1.33e-61 | 198 |
| Msa1407900 | MtrunA17_Chr8g0346371 | 30.913 | 427 | 230 | 12 | 55 | 467 | 39 | 414 | 2.79e-59 | 202 |
| Msa1407900 | MtrunA17_Chr6g0452481 | 42.424 | 264 | 127 | 5 | 213 | 467 | 7 | 254 | 7.14e-59 | 196 |
| Msa1407900 | MtrunA17_Chr3g0134841 | 72.477 | 109 | 29 | 1 | 14 | 121 | 26 | 134 | 5.72e-51 | 169 |
| Msa1407900 | MtrunA17_Chr1g0148871 | 41.129 | 124 | 71 | 1 | 346 | 469 | 12 | 133 | 3.68e-23 | 96.3 |
| Msa1407900 | MtrunA17_Chr5g0404451 | 84.091 | 44 | 7 | 0 | 396 | 439 | 1 | 44 | 4.31e-18 | 78.2 |
| Msa1407900 | MtrunA17_Chr3g0145011 | 31.902 | 163 | 88 | 6 | 249 | 404 | 166 | 312 | 1.23e-11 | 66.2 |
| Msa1407900 | MtrunA17_Chr3g0141901 | 31.288 | 163 | 89 | 6 | 249 | 404 | 163 | 309 | 1.97e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407900 | AT2G18193.1 | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.90e-134 | 397 |
| Msa1407900 | AT2G18190.1 | 43.515 | 478 | 226 | 8 | 12 | 474 | 4 | 452 | 5.97e-132 | 391 |
| Msa1407900 | AT3G50940.1 | 44.685 | 461 | 230 | 6 | 10 | 467 | 3 | 441 | 1.52e-130 | 386 |
| Msa1407900 | AT5G17760.1 | 43.413 | 463 | 246 | 5 | 15 | 471 | 6 | 458 | 9.92e-124 | 370 |
| Msa1407900 | AT5G17730.1 | 43.137 | 459 | 240 | 7 | 12 | 467 | 3 | 443 | 2.88e-121 | 363 |
| Msa1407900 | AT5G17740.1 | 43.355 | 459 | 240 | 7 | 15 | 467 | 6 | 450 | 3.44e-120 | 362 |
| Msa1407900 | AT3G50930.1 | 42.760 | 442 | 230 | 5 | 34 | 467 | 73 | 499 | 7.98e-118 | 358 |
| Msa1407900 | AT4G05380.1 | 39.496 | 476 | 263 | 8 | 10 | 479 | 3 | 459 | 2.77e-109 | 332 |
| Msa1407900 | AT1G43910.1 | 37.234 | 470 | 259 | 9 | 10 | 467 | 2 | 447 | 3.62e-98 | 304 |
| Msa1407900 | AT5G17750.1 | 39.110 | 427 | 214 | 6 | 15 | 436 | 6 | 391 | 1.24e-97 | 300 |
| Msa1407900 | AT3G28510.1 | 41.565 | 409 | 201 | 7 | 82 | 468 | 67 | 459 | 2.61e-96 | 301 |
| Msa1407900 | AT3G28610.1 | 39.062 | 448 | 224 | 11 | 55 | 485 | 52 | 467 | 3.28e-94 | 294 |
| Msa1407900 | AT3G28600.1 | 37.768 | 466 | 245 | 11 | 18 | 467 | 10 | 446 | 7.66e-94 | 293 |
| Msa1407900 | AT4G25835.1 | 34.316 | 475 | 279 | 10 | 27 | 485 | 9 | 466 | 6.97e-91 | 286 |
| Msa1407900 | AT3G28580.1 | 36.831 | 486 | 247 | 13 | 5 | 463 | 3 | 455 | 1.72e-89 | 282 |
| Msa1407900 | AT3G28570.2 | 36.747 | 498 | 258 | 14 | 1 | 483 | 1 | 456 | 2.32e-89 | 281 |
| Msa1407900 | AT3G28570.1 | 36.939 | 490 | 252 | 14 | 9 | 483 | 2 | 449 | 4.44e-89 | 280 |
| Msa1407900 | AT3G28540.2 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.27e-88 | 280 |
| Msa1407900 | AT3G28540.1 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.58e-88 | 280 |
| Msa1407900 | AT5G40000.1 | 36.025 | 483 | 244 | 16 | 12 | 468 | 7 | 450 | 6.14e-88 | 277 |
| Msa1407900 | AT5G40010.1 | 36.709 | 474 | 256 | 8 | 13 | 463 | 8 | 460 | 1.86e-87 | 277 |
| Msa1407900 | AT5G57480.1 | 33.548 | 465 | 273 | 7 | 27 | 467 | 9 | 461 | 3.93e-86 | 274 |
| Msa1407900 | AT3G28600.2 | 45.886 | 316 | 147 | 7 | 165 | 467 | 103 | 407 | 1.13e-81 | 260 |
| Msa1407900 | AT4G30250.1 | 33.546 | 471 | 279 | 8 | 20 | 468 | 2 | 460 | 1.61e-81 | 262 |
| Msa1407900 | AT3G28520.1 | 44.073 | 329 | 163 | 5 | 155 | 466 | 117 | 441 | 1.68e-81 | 261 |
| Msa1407900 | AT4G30250.2 | 33.546 | 471 | 279 | 8 | 20 | 468 | 4 | 462 | 2.12e-81 | 262 |
| Msa1407900 | AT3G28580.2 | 34.937 | 478 | 245 | 12 | 5 | 463 | 3 | 433 | 2.10e-77 | 250 |
| Msa1407900 | AT5G17760.2 | 41.195 | 318 | 182 | 2 | 15 | 328 | 6 | 322 | 1.23e-75 | 241 |
| Msa1407900 | AT2G46620.1 | 32.684 | 462 | 232 | 14 | 25 | 467 | 15 | 416 | 4.68e-69 | 229 |
| Msa1407900 | AT3G29800.1 | 38.068 | 352 | 162 | 10 | 123 | 465 | 74 | 378 | 1.18e-60 | 205 |
| Msa1407900 | AT4G05340.1 | 55.844 | 77 | 32 | 1 | 344 | 420 | 19 | 93 | 7.98e-21 | 87.4 |
| Msa1407900 | AT5G43010.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.05e-11 | 67.0 |
| Msa1407900 | AT1G45000.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.52e-11 | 66.6 |
| Msa1407900 | AT3G28560.1 | 26.316 | 152 | 93 | 2 | 91 | 232 | 69 | 211 | 7.81e-11 | 63.2 |
Find 82 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTCAAATTGATCAGTTT+TGG | 0.150920 | tig0023329:+38883 | Msa1407900:CDS |
| CTGGGTCTACTTTGTCCTTA+TGG | 0.184391 | tig0023329:-42275 | None:intergenic |
| TCAAAAGACTATGAAGAAAA+TGG | 0.215368 | tig0023329:+39155 | Msa1407900:CDS |
| TGAAGTGAAACTTGGTTATT+TGG | 0.217186 | tig0023329:-38867 | None:intergenic |
| TAGAAGTTTACTTAATTTAT+TGG | 0.221662 | tig0023329:+42893 | Msa1407900:three_prime_UTR |
| TTGATGATATCAAGCTTAAA+TGG | 0.279360 | tig0023329:+39057 | Msa1407900:CDS |
| CCAGACAAAGTAAACTTTCT+AGG | 0.283489 | tig0023329:-42183 | None:intergenic |
| TTTAGTAGGGATATACTCTT+TGG | 0.296287 | tig0023329:-38937 | None:intergenic |
| GTCTGGTCTGCTTAACTATA+TGG | 0.299508 | tig0023329:+42200 | Msa1407900:CDS |
| ACCAGACAAGTTTCCAGATA+TGG | 0.299840 | tig0023329:+39664 | Msa1407900:CDS |
| TGAACAAATTGAAGAGCTAT+TGG | 0.308188 | tig0023329:+42416 | Msa1407900:CDS |
| AAACGTGGTTACTTATTATA+TGG | 0.310407 | tig0023329:+39449 | Msa1407900:CDS |
| AAAACTACAATAACATAATA+AGG | 0.310725 | tig0023329:-42632 | None:intergenic |
| AAGAACTATGTTGTTATGTT+TGG | 0.317224 | tig0023329:-39000 | None:intergenic |
| CCTAGAAAGTTTACTTTGTC+TGG | 0.319922 | tig0023329:+42183 | Msa1407900:CDS |
| TATTCACTTGTCATTTCTTA+AGG | 0.331615 | tig0023329:+42329 | Msa1407900:CDS |
| GGCCAAAGCATTCAGAATCT+TGG | 0.339174 | tig0023329:+42350 | Msa1407900:CDS |
| GAAATTTGATGTGTATGATT+TGG | 0.345687 | tig0023329:+39523 | Msa1407900:CDS |
| AATCTTGGCTTCTAATTACT+TGG | 0.360580 | tig0023329:+42365 | Msa1407900:CDS |
| AAGATTCATTCTATGCAATC+TGG | 0.364238 | tig0023329:+39284 | Msa1407900:CDS |
| ATCAAAACCATCATCATTGT+TGG | 0.393123 | tig0023329:-39096 | None:intergenic |
| AGCCAAGATTCTGAATGCTT+TGG | 0.400001 | tig0023329:-42352 | None:intergenic |
| TCCATATCTGGAAACTTGTC+TGG | 0.403332 | tig0023329:-39665 | None:intergenic |
| CTTTGGCTGCATAGTAAAGA+TGG | 0.405145 | tig0023329:-38920 | None:intergenic |
| CGACCAGGGCGCAACAATGC+TGG | 0.407208 | tig0023329:-42294 | None:intergenic |
| TCTAATTACTTGGACATTGA+AGG | 0.408423 | tig0023329:+42375 | Msa1407900:CDS |
| TTCATTTGATTCACTTGCTA+TGG | 0.411884 | tig0023329:+39340 | Msa1407900:CDS |
| TGTTGTTTATGTGTGGATAA+TGG | 0.411949 | tig0023329:-38653 | None:intergenic |
| TTATATGGTCCACCAGGAAC+TGG | 0.430679 | tig0023329:+39464 | Msa1407900:CDS |
| TTTAAGGGATTTGTAAGTGT+TGG | 0.439054 | tig0023329:-38964 | None:intergenic |
| ACTTACAAATCCCTTAAAGT+TGG | 0.449216 | tig0023329:+38969 | Msa1407900:CDS |
| GTTAAATCACTTTGTTTCCA+TGG | 0.449328 | tig0023329:-39308 | None:intergenic |
| ATCTAGTCTTATTGCTGCTA+TGG | 0.454061 | tig0023329:+39490 | Msa1407900:CDS |
| AAGAGAAACGACCAACCATT+GGG | 0.454644 | tig0023329:-38683 | None:intergenic |
| CAAAAGACTATGAAGAAAAT+GGG | 0.454921 | tig0023329:+39156 | Msa1407900:CDS |
| GAAGATCCTGATGTTGCTCT+TGG | 0.466250 | tig0023329:+42489 | Msa1407900:CDS |
| TCTTCTTCATTCACAAACAT+TGG | 0.471142 | tig0023329:+38702 | Msa1407900:CDS |
| GAAAATTCCAACAATGATGA+TGG | 0.483127 | tig0023329:+39089 | Msa1407900:CDS |
| GATCAATTTGAAGTGAAACT+TGG | 0.486219 | tig0023329:-38875 | None:intergenic |
| AGATACTCTGCCACTACAGC+AGG | 0.486605 | tig0023329:-42456 | None:intergenic |
| GATATTTACGACGAACCATA+AGG | 0.488719 | tig0023329:+42260 | Msa1407900:CDS |
| ACTTATGATGCTATAAAAGC+AGG | 0.490362 | tig0023329:+39248 | Msa1407900:CDS |
| GTGAAACTTGGTTATTTGGT+TGG | 0.495911 | tig0023329:-38863 | None:intergenic |
| TTAACTATATGGATGGTTTG+TGG | 0.503709 | tig0023329:+42211 | Msa1407900:CDS |
| ATTGTTGCGCCCTGGTCGTA+TGG | 0.508196 | tig0023329:+42299 | Msa1407900:CDS |
| AATGATATCTGAAATTGTAA+TGG | 0.510074 | tig0023329:-42787 | None:intergenic |
| GAAGAGAAACGACCAACCAT+TGG | 0.510972 | tig0023329:-38684 | None:intergenic |
| ACATTGGTTCAGCATCATCA+TGG | 0.528828 | tig0023329:+38718 | Msa1407900:CDS |
| GCAAGTGAATCAAATGAAGC+AGG | 0.530314 | tig0023329:-39335 | None:intergenic |
| AATAAGTAACCACGTTTCCA+AGG | 0.530569 | tig0023329:-39443 | None:intergenic |
| CTATAATTGATGATTTAGAT+CGG | 0.531151 | tig0023329:+39381 | Msa1407900:CDS |
| GACCCAGCATTGTTGCGCCC+TGG | 0.532969 | tig0023329:+42291 | Msa1407900:CDS |
| AATTTCAGATATCATTCAGT+AGG | 0.538203 | tig0023329:+42794 | Msa1407900:three_prime_UTR |
| AGATGTCACCCCTGCTGTAG+TGG | 0.539506 | tig0023329:+42446 | Msa1407900:CDS |
| GACCAGGGCGCAACAATGCT+GGG | 0.539616 | tig0023329:-42293 | None:intergenic |
| GAAGCATAGAGATAAAGTAA+TGG | 0.547256 | tig0023329:+39199 | Msa1407900:CDS |
| GGTCTGCTTAACTATATGGA+TGG | 0.549195 | tig0023329:+42204 | Msa1407900:CDS |
| AGTTCCCTCTAGTATTGTAA+AGG | 0.554385 | tig0023329:+42701 | Msa1407900:three_prime_UTR |
| GATGGTTTGTGGTCAAGTTG+TGG | 0.563526 | tig0023329:+42222 | Msa1407900:CDS |
| AGTGCTCCAAGAGCAACATC+AGG | 0.565349 | tig0023329:-42495 | None:intergenic |
| TCTATTAGATGTCTCTCTCA+TGG | 0.569550 | tig0023329:-39585 | None:intergenic |
| GGTCTCATGTTGTTTATGTG+TGG | 0.571783 | tig0023329:-38660 | None:intergenic |
| AGACATTGATTGCAATTCAG+AGG | 0.577579 | tig0023329:+39625 | Msa1407900:CDS |
| ATATGCATGTCCATACGACC+AGG | 0.580884 | tig0023329:-42309 | None:intergenic |
| TCATAAGTGCTTAAAACATG+TGG | 0.584224 | tig0023329:-39233 | None:intergenic |
| TACTTATTATATGGTCCACC+AGG | 0.593809 | tig0023329:+39458 | Msa1407900:CDS |
| GTTGGCAAGCCTTGGAAACG+TGG | 0.596762 | tig0023329:+39434 | Msa1407900:CDS |
| TGATGGAAAACAAGTAGTGG+AGG | 0.599321 | tig0023329:+39028 | Msa1407900:CDS |
| ATGATATCAAGCTTAAATGG+AGG | 0.601584 | tig0023329:+39060 | Msa1407900:CDS |
| AGTATAAGGAATATAAGCAT+AGG | 0.601948 | tig0023329:+39132 | Msa1407900:CDS |
| ATTCTATGCAATCTGGACCA+TGG | 0.603360 | tig0023329:+39291 | Msa1407900:CDS |
| GATACTCTGCCACTACAGCA+GGG | 0.619261 | tig0023329:-42455 | None:intergenic |
| CATACCTTTACAATACTAGA+GGG | 0.632099 | tig0023329:-42705 | None:intergenic |
| GCATACCTTTACAATACTAG+AGG | 0.643016 | tig0023329:-42706 | None:intergenic |
| AGAGAAACGACCAACCATTG+GGG | 0.654195 | tig0023329:-38682 | None:intergenic |
| AGTAATTTGTCACACAACTG+AGG | 0.662002 | tig0023329:-42596 | None:intergenic |
| ATACTCTGCCACTACAGCAG+GGG | 0.676441 | tig0023329:-42454 | None:intergenic |
| AATTTGTCACACAACTGAGG+AGG | 0.686396 | tig0023329:-42593 | None:intergenic |
| TATGCATGTCCATACGACCA+GGG | 0.693400 | tig0023329:-42308 | None:intergenic |
| GAGAAACGACCAACCATTGG+GGG | 0.708121 | tig0023329:-38681 | None:intergenic |
| TTTGTGGTCAAGTTGTGGAG+AGG | 0.724193 | tig0023329:+42227 | Msa1407900:CDS |
| GACAAAGTAAACTTTCTAGG+CGG | 0.728578 | tig0023329:-42180 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTACTTTTAC+GGG | + | tig0023329:40193-40212 | Msa1407900:intron | 10.0% |
| !! | TTATTCTATCAAATTATTAT+CGG | + | tig0023329:41000-41019 | Msa1407900:intron | 10.0% |
| !!! | ATGAAATTTCTAAGTTTTAA+GGG | - | tig0023329:38810-38829 | None:intergenic | 15.0% |
| !! | AAAAAGTTGTATAAAAAAGT+TGG | + | tig0023329:39416-39435 | Msa1407900:CDS | 15.0% |
| !!! | TTTTTTTTTTAAACAAGCAA+TGG | + | tig0023329:40334-40353 | Msa1407900:intron | 15.0% |
| !!! | TTAATTTTAGTTTTTTGACA+CGG | - | tig0023329:40428-40447 | None:intergenic | 15.0% |
| !!! | AATTTGGTGTTATAAAAAAA+AGG | + | tig0023329:40551-40570 | Msa1407900:intron | 15.0% |
| !!! | AAAAAAAGGATTTTTAAGTT+TGG | + | tig0023329:40565-40584 | Msa1407900:intron | 15.0% |
| !!! | AAAAAAGGATTTTTAAGTTT+GGG | + | tig0023329:40566-40585 | Msa1407900:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | tig0023329:41675-41694 | Msa1407900:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | tig0023329:41676-41695 | Msa1407900:intron | 15.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | + | tig0023329:41700-41719 | Msa1407900:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | tig0023329:41675-41694 | Msa1407900:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | tig0023329:41676-41695 | Msa1407900:intron | 15.0% |
| !! | AAAATGGAATATATTGTATT+GGG | + | tig0023329:41812-41831 | Msa1407900:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | tig0023329:41852-41871 | Msa1407900:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | tig0023329:41853-41872 | Msa1407900:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | tig0023329:41852-41871 | Msa1407900:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | tig0023329:41853-41872 | Msa1407900:intron | 15.0% |
| !! | AAAACTACAATAACATAATA+AGG | - | tig0023329:42635-42654 | None:intergenic | 15.0% |
| !! | TAGAAGTTTACTTAATTTAT+TGG | + | tig0023329:42893-42912 | Msa1407900:three_prime_UTR | 15.0% |
| !!! | GATGAAATTTCTAAGTTTTA+AGG | - | tig0023329:38811-38830 | None:intergenic | 20.0% |
| !!! | TTATAGAGTTTTTTAGATCA+GGG | - | tig0023329:39367-39386 | None:intergenic | 20.0% |
| !!! | ATTATAGAGTTTTTTAGATC+AGG | - | tig0023329:39368-39387 | None:intergenic | 20.0% |
| !!! | CTATAATTGATGATTTAGAT+CGG | + | tig0023329:39381-39400 | Msa1407900:CDS | 20.0% |
| !!! | TAACTGTTAAGAATTTTAAC+TGG | + | tig0023329:39847-39866 | Msa1407900:intron | 20.0% |
| !!! | TGTCTTATTTCTTACATTTA+CGG | + | tig0023329:39876-39895 | Msa1407900:intron | 20.0% |
| !!! | TGTTAGTTTATTAGATAGAT+AGG | + | tig0023329:40289-40308 | Msa1407900:intron | 20.0% |
| !!! | AAAAAAACTATTTCTATTGC+TGG | - | tig0023329:40319-40338 | None:intergenic | 20.0% |
| !! | CGGTTTAAATAATTTAGTTA+TGG | - | tig0023329:40408-40427 | None:intergenic | 20.0% |
| !! | ATAAATTATATGTTGATCGA+AGG | + | tig0023329:40522-40541 | Msa1407900:intron | 20.0% |
| !! | TTCAATGTAATCATATTTGT+TGG | - | tig0023329:40975-40994 | None:intergenic | 20.0% |
| !!! | ATAAACTTAATTTTTGACAG+TGG | - | tig0023329:41519-41538 | None:intergenic | 20.0% |
| !!! | AAAATGTAAGTCATTTTTAG+TGG | - | tig0023329:41571-41590 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | tig0023329:41677-41696 | Msa1407900:intron | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | + | tig0023329:41699-41718 | Msa1407900:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | tig0023329:41677-41696 | Msa1407900:intron | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | + | tig0023329:41811-41830 | Msa1407900:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | tig0023329:41885-41904 | Msa1407900:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | tig0023329:41886-41905 | Msa1407900:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | + | tig0023329:41922-41941 | Msa1407900:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | + | tig0023329:41922-41941 | Msa1407900:intron | 20.0% |
| !!! | AATGATATCTGAAATTGTAA+TGG | - | tig0023329:42790-42809 | None:intergenic | 20.0% |
| !! | ACTTCAAATTGATCAGTTTT+GGG | + | tig0023329:38884-38903 | Msa1407900:CDS | 25.0% |
| !!! | AAGTGTTGGATATTTTAGTA+GGG | - | tig0023329:38953-38972 | None:intergenic | 25.0% |
| !!! | TAAGTGTTGGATATTTTAGT+AGG | - | tig0023329:38954-38973 | None:intergenic | 25.0% |
| !! | GGATATTTTTCCAACTTTAA+GGG | - | tig0023329:38982-39001 | None:intergenic | 25.0% |
| !! | TGGATATTTTTCCAACTTTA+AGG | - | tig0023329:38983-39002 | None:intergenic | 25.0% |
| ! | AAGAACTATGTTGTTATGTT+TGG | - | tig0023329:39003-39022 | None:intergenic | 25.0% |
| !! | TTGATGATATCAAGCTTAAA+TGG | + | tig0023329:39057-39076 | Msa1407900:CDS | 25.0% |
| !! | TATTCCTTATACTCCTTTTT+GGG | - | tig0023329:39125-39144 | None:intergenic | 25.0% |
| !! | ATATTCCTTATACTCCTTTT+TGG | - | tig0023329:39126-39145 | None:intergenic | 25.0% |
| ! | AGTATAAGGAATATAAGCAT+AGG | + | tig0023329:39132-39151 | Msa1407900:CDS | 25.0% |
| ! | TCAAAAGACTATGAAGAAAA+TGG | + | tig0023329:39155-39174 | Msa1407900:CDS | 25.0% |
| ! | CAAAAGACTATGAAGAAAAT+GGG | + | tig0023329:39156-39175 | Msa1407900:CDS | 25.0% |
| ! | AAACGTGGTTACTTATTATA+TGG | + | tig0023329:39449-39468 | Msa1407900:CDS | 25.0% |
| ! | GAAATTTGATGTGTATGATT+TGG | + | tig0023329:39523-39542 | Msa1407900:CDS | 25.0% |
| !!! | CAGATATGGATTTTTTAGAT+GGG | + | tig0023329:39678-39697 | Msa1407900:CDS | 25.0% |
| !!! | CTCTTTTTTTAGTTTGAGTT+TGG | + | tig0023329:39805-39824 | Msa1407900:intron | 25.0% |
| ! | TTTGAAAGAGTAGAGAAAAA+GGG | + | tig0023329:39963-39982 | Msa1407900:intron | 25.0% |
| !!! | GTTTGTTGTTGTTGTTAAAT+TGG | + | tig0023329:40154-40173 | Msa1407900:intron | 25.0% |
| ! | GTAATAATTATGGAGCAAAA+TGG | + | tig0023329:40258-40277 | Msa1407900:intron | 25.0% |
| ! | TGATCGAAGGATTTATAATT+TGG | + | tig0023329:40535-40554 | Msa1407900:intron | 25.0% |
| !!! | ATTTTTAAGTTTGGGCATTT+TGG | + | tig0023329:40574-40593 | Msa1407900:intron | 25.0% |
| !! | GTCAAAACTTTTAACAGTTA+TGG | - | tig0023329:40784-40803 | None:intergenic | 25.0% |
| !!! | TAACTGTTAAAAGTTTTGAC+TGG | + | tig0023329:40784-40803 | Msa1407900:intron | 25.0% |
| !!! | AACTGTTAAAAGTTTTGACT+GGG | + | tig0023329:40785-40804 | Msa1407900:intron | 25.0% |
| !!! | TATCTGGTTAGTCTAATTTA+GGG | - | tig0023329:40906-40925 | None:intergenic | 25.0% |
| !!! | ATATCTGGTTAGTCTAATTT+AGG | - | tig0023329:40907-40926 | None:intergenic | 25.0% |
| ! | TATGTTATTCTACTGATAAG+AGG | - | tig0023329:41328-41347 | None:intergenic | 25.0% |
| ! | TTTAGTGGTTAATAAAGTAC+TGG | - | tig0023329:41556-41575 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | + | tig0023329:41796-41815 | Msa1407900:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | tig0023329:42019-42038 | Msa1407900:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | tig0023329:42020-42039 | Msa1407900:intron | 25.0% |
| !!! | ACTTGTTTTTCTTGAAATTG+TGG | + | tig0023329:42137-42156 | Msa1407900:intron | 25.0% |
| !! | TATTCACTTGTCATTTCTTA+AGG | + | tig0023329:42329-42348 | Msa1407900:CDS | 25.0% |
| ! | AATTTCAGATATCATTCAGT+AGG | + | tig0023329:42794-42813 | Msa1407900:three_prime_UTR | 25.0% |
| ! | TGTTGTTTATGTGTGGATAA+TGG | - | tig0023329:38656-38675 | None:intergenic | 30.0% |
| TCTTCTTCATTCACAAACAT+TGG | + | tig0023329:38702-38721 | Msa1407900:CDS | 30.0% | |
| TGAAGTGAAACTTGGTTATT+TGG | - | tig0023329:38870-38889 | None:intergenic | 30.0% | |
| ! | GATCAATTTGAAGTGAAACT+TGG | - | tig0023329:38878-38897 | None:intergenic | 30.0% |
| ! | CACTTCAAATTGATCAGTTT+TGG | + | tig0023329:38883-38902 | Msa1407900:CDS | 30.0% |
| TTTAGTAGGGATATACTCTT+TGG | - | tig0023329:38940-38959 | None:intergenic | 30.0% | |
| TTTAAGGGATTTGTAAGTGT+TGG | - | tig0023329:38967-38986 | None:intergenic | 30.0% | |
| ACTTACAAATCCCTTAAAGT+TGG | + | tig0023329:38969-38988 | Msa1407900:CDS | 30.0% | |
| !! | AACATAGTTCTTGCTTTTGA+TGG | + | tig0023329:39011-39030 | Msa1407900:CDS | 30.0% |
| ! | TTTTGATGGAAAACAAGTAG+TGG | + | tig0023329:39025-39044 | Msa1407900:CDS | 30.0% |
| ATGATATCAAGCTTAAATGG+AGG | + | tig0023329:39060-39079 | Msa1407900:CDS | 30.0% | |
| GAAAATTCCAACAATGATGA+TGG | + | tig0023329:39089-39108 | Msa1407900:CDS | 30.0% | |
| ATCAAAACCATCATCATTGT+TGG | - | tig0023329:39099-39118 | None:intergenic | 30.0% | |
| !!! | TGGTTTTGATAATCCCAAAA+AGG | + | tig0023329:39109-39128 | Msa1407900:CDS | 30.0% |
| ! | TAATCCCAAAAAGGAGTATA+AGG | + | tig0023329:39118-39137 | Msa1407900:CDS | 30.0% |
| GAAGCATAGAGATAAAGTAA+TGG | + | tig0023329:39199-39218 | Msa1407900:CDS | 30.0% | |
| TCATAAGTGCTTAAAACATG+TGG | - | tig0023329:39236-39255 | None:intergenic | 30.0% | |
| ACTTATGATGCTATAAAAGC+AGG | + | tig0023329:39248-39267 | Msa1407900:CDS | 30.0% | |
| AAGATTCATTCTATGCAATC+TGG | + | tig0023329:39284-39303 | Msa1407900:CDS | 30.0% | |
| ! | GTTAAATCACTTTGTTTCCA+TGG | - | tig0023329:39311-39330 | None:intergenic | 30.0% |
| ! | TTCATTTGATTCACTTGCTA+TGG | + | tig0023329:39340-39359 | Msa1407900:CDS | 30.0% |
| !! | ATGATTTAGATCGGTTTTTG+AGG | + | tig0023329:39390-39409 | Msa1407900:CDS | 30.0% |
| CCATCTAAAAAATCCATATC+TGG | - | tig0023329:39680-39699 | None:intergenic | 30.0% | |
| !!! | CCAGATATGGATTTTTTAGA+TGG | + | tig0023329:39677-39696 | Msa1407900:CDS | 30.0% |
| !!! | GGATTTTTTAGATGGGATTA+AGG | + | tig0023329:39685-39704 | Msa1407900:CDS | 30.0% |
| GTTTGAAAGAGTAGAGAAAA+AGG | + | tig0023329:39962-39981 | Msa1407900:intron | 30.0% | |
| TTGAAAGAGTAGAGAAAAAG+GGG | + | tig0023329:39964-39983 | Msa1407900:intron | 30.0% | |
| GAGAAATAGGGTAGATTTAA+TGG | - | tig0023329:40666-40685 | None:intergenic | 30.0% | |
| TGAGAAATAGGTGAGAAATA+GGG | - | tig0023329:40678-40697 | None:intergenic | 30.0% | |
| GAGAGAAATATGTGAGAAAT+AGG | - | tig0023329:40690-40709 | None:intergenic | 30.0% | |
| GAAGTTATGAAGAGAGAAAT+AGG | - | tig0023329:40731-40750 | None:intergenic | 30.0% | |
| AACAGTTATGGAGTAACTAA+GGG | - | tig0023329:40772-40791 | None:intergenic | 30.0% | |
| TAACAGTTATGGAGTAACTA+AGG | - | tig0023329:40773-40792 | None:intergenic | 30.0% | |
| !! | ATCTGGTTAGTCTAATTTAG+GGG | - | tig0023329:40905-40924 | None:intergenic | 30.0% |
| AAATGACAATGTGTATTGTG+TGG | + | tig0023329:41136-41155 | Msa1407900:intron | 30.0% | |
| !!! | TTTGTTTTGTTCAGGTCTAA+TGG | - | tig0023329:41304-41323 | None:intergenic | 30.0% |
| !!! | TAAGAGGATTTGTTTTGTTC+AGG | - | tig0023329:41312-41331 | None:intergenic | 30.0% |
| !!! | TGATAAGACTAGTCTTTTAC+TGG | - | tig0023329:41357-41376 | None:intergenic | 30.0% |
| ATACTTTCAGCTTAACTTCT+TGG | - | tig0023329:41448-41467 | None:intergenic | 30.0% | |
| ! | GACTTACATTTTGCTAGTTA+AGG | + | tig0023329:41579-41598 | Msa1407900:intron | 30.0% |
| CAAAATAGGTCAATTATACC+GGG | - | tig0023329:41752-41771 | None:intergenic | 30.0% | |
| CCAAAATAGGTCAATTATAC+CGG | - | tig0023329:41753-41772 | None:intergenic | 30.0% | |
| TCTGTGTGAAAAACCAAAAT+AGG | - | tig0023329:41766-41785 | None:intergenic | 30.0% | |
| !!! | TTGAAATGGGTCAGTTTTTT+TGG | + | tig0023329:41899-41918 | Msa1407900:intron | 30.0% |
| !!! | TGAAATGGGTCAGTTTTTTT+GGG | + | tig0023329:41900-41919 | Msa1407900:intron | 30.0% |
| AGAAAATAGGTCAGTTATTC+CGG | + | tig0023329:41935-41954 | Msa1407900:intron | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | + | tig0023329:41935-41954 | Msa1407900:intron | 30.0% | |
| TCTTGAAATTGTGGAATAGA+TGG | + | tig0023329:42146-42165 | Msa1407900:intron | 30.0% | |
| TTAACTATATGGATGGTTTG+TGG | + | tig0023329:42211-42230 | Msa1407900:CDS | 30.0% | |
| AATCTTGGCTTCTAATTACT+TGG | + | tig0023329:42365-42384 | Msa1407900:CDS | 30.0% | |
| TCTAATTACTTGGACATTGA+AGG | + | tig0023329:42375-42394 | Msa1407900:CDS | 30.0% | |
| TGAACAAATTGAAGAGCTAT+TGG | + | tig0023329:42416-42435 | Msa1407900:CDS | 30.0% | |
| CATACCTTTACAATACTAGA+GGG | - | tig0023329:42708-42727 | None:intergenic | 30.0% | |
| GTGAAACTTGGTTATTTGGT+TGG | - | tig0023329:38866-38885 | None:intergenic | 35.0% | |
| !!! | CAAATTGATCAGTTTTGGGA+TGG | + | tig0023329:38888-38907 | Msa1407900:CDS | 35.0% |
| !! | ATTTAGATCGGTTTTTGAGG+AGG | + | tig0023329:39393-39412 | Msa1407900:CDS | 35.0% |
| ATAAAAAAGTTGGCAAGCCT+TGG | + | tig0023329:39426-39445 | Msa1407900:CDS | 35.0% | |
| AATAAGTAACCACGTTTCCA+AGG | - | tig0023329:39446-39465 | None:intergenic | 35.0% | |
| TACTTATTATATGGTCCACC+AGG | + | tig0023329:39458-39477 | Msa1407900:CDS | 35.0% | |
| !! | ATCTAGTCTTATTGCTGCTA+TGG | + | tig0023329:39490-39509 | Msa1407900:CDS | 35.0% |
| TCTATTAGATGTCTCTCTCA+TGG | - | tig0023329:39588-39607 | None:intergenic | 35.0% | |
| ! | AGACATTGATTGCAATTCAG+AGG | + | tig0023329:39625-39644 | Msa1407900:CDS | 35.0% |
| ! | TGAGTTTGGTTTCTTGAGTT+TGG | + | tig0023329:39819-39838 | Msa1407900:intron | 35.0% |
| GTTTGTTTGAAGAGAGATAG+AGG | + | tig0023329:39902-39921 | Msa1407900:intron | 35.0% | |
| GAGAGAGACCAAATATATGT+GGG | + | tig0023329:39986-40005 | Msa1407900:intron | 35.0% | |
| GAGGAGAAGAAAAATAGCTA+TGG | - | tig0023329:40014-40033 | None:intergenic | 35.0% | |
| AAAGTGGAAAAGCAAAAGAG+TGG | - | tig0023329:40066-40085 | None:intergenic | 35.0% | |
| CAAAGAAAGAAGGGTAAAAG+TGG | - | tig0023329:40082-40101 | None:intergenic | 35.0% | |
| AATACCAATTCAAGACAAGG+TGG | - | tig0023329:40122-40141 | None:intergenic | 35.0% | |
| AGCAATACCAATTCAAGACA+AGG | - | tig0023329:40125-40144 | None:intergenic | 35.0% | |
| TTGTCTTGAATTGGTATTGC+TGG | + | tig0023329:40124-40143 | Msa1407900:intron | 35.0% | |
| TGTCTTGAATTGGTATTGCT+GGG | + | tig0023329:40125-40144 | Msa1407900:intron | 35.0% | |
| GTGAGAAATAGGTGAGAAAT+AGG | - | tig0023329:40679-40698 | None:intergenic | 35.0% | |
| TAGACTAACCAGATATGAAG+TGG | + | tig0023329:40911-40930 | Msa1407900:intron | 35.0% | |
| TAACCAGATATGAAGTGGTT+AGG | + | tig0023329:40916-40935 | Msa1407900:intron | 35.0% | |
| ATTGTATCTATGTCGTGTCT+GGG | + | tig0023329:41027-41046 | Msa1407900:intron | 35.0% | |
| CATCCATGAGTATATTTGTG+TGG | - | tig0023329:41097-41116 | None:intergenic | 35.0% | |
| ! | ACACATTGTCATTTGCATCT+GGG | - | tig0023329:41130-41149 | None:intergenic | 35.0% |
| ! | TACACATTGTCATTTGCATC+TGG | - | tig0023329:41131-41150 | None:intergenic | 35.0% |
| ! | TTTTGTTCAGGTCTAATGGT+AGG | - | tig0023329:41300-41319 | None:intergenic | 35.0% |
| !!! | AAGACTAGTCTTTTACTGGT+TGG | - | tig0023329:41353-41372 | None:intergenic | 35.0% |
| CAAAGTAGGTCAATTAAACC+GGG | - | tig0023329:41640-41659 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | - | tig0023329:41641-41660 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | tig0023329:41654-41673 | None:intergenic | 35.0% | |
| ! | CCGGTATAATTGACCTATTT+TGG | + | tig0023329:41750-41769 | Msa1407900:intron | 35.0% |
| GAAAATAGGTCAGTTATTCC+GGG | + | tig0023329:41936-41955 | Msa1407900:intron | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | + | tig0023329:41936-41955 | Msa1407900:intron | 35.0% | |
| GACAAAGTAAACTTTCTAGG+CGG | - | tig0023329:42183-42202 | None:intergenic | 35.0% | |
| CCAGACAAAGTAAACTTTCT+AGG | - | tig0023329:42186-42205 | None:intergenic | 35.0% | |
| CCTAGAAAGTTTACTTTGTC+TGG | + | tig0023329:42183-42202 | Msa1407900:CDS | 35.0% | |
| GATATTTACGACGAACCATA+AGG | + | tig0023329:42260-42279 | Msa1407900:CDS | 35.0% | |
| ! | AGTAATTTGTCACACAACTG+AGG | - | tig0023329:42599-42618 | None:intergenic | 35.0% |
| ! | GCAATGTTTGCTTCTTTTAC+AGG | - | tig0023329:42680-42699 | None:intergenic | 35.0% |
| AGTTCCCTCTAGTATTGTAA+AGG | + | tig0023329:42701-42720 | Msa1407900:three_prime_UTR | 35.0% | |
| GCATACCTTTACAATACTAG+AGG | - | tig0023329:42709-42728 | None:intergenic | 35.0% | |
| ! | GGTCTCATGTTGTTTATGTG+TGG | - | tig0023329:38663-38682 | None:intergenic | 40.0% |
| AAGAGAAACGACCAACCATT+GGG | - | tig0023329:38686-38705 | None:intergenic | 40.0% | |
| !! | ACATTGGTTCAGCATCATCA+TGG | + | tig0023329:38718-38737 | Msa1407900:CDS | 40.0% |
| CTTTGGCTGCATAGTAAAGA+TGG | - | tig0023329:38923-38942 | None:intergenic | 40.0% | |
| TGATGGAAAACAAGTAGTGG+AGG | + | tig0023329:39028-39047 | Msa1407900:CDS | 40.0% | |
| ATTCTATGCAATCTGGACCA+TGG | + | tig0023329:39291-39310 | Msa1407900:CDS | 40.0% | |
| GCAAGTGAATCAAATGAAGC+AGG | - | tig0023329:39338-39357 | None:intergenic | 40.0% | |
| ! | AGACTAGATTTTCCAGTTCC+TGG | - | tig0023329:39479-39498 | None:intergenic | 40.0% |
| ACCAGACAAGTTTCCAGATA+TGG | + | tig0023329:39664-39683 | Msa1407900:CDS | 40.0% | |
| TCCATATCTGGAAACTTGTC+TGG | - | tig0023329:39668-39687 | None:intergenic | 40.0% | |
| GGAGAGAGACCAAATATATG+TGG | + | tig0023329:39985-40004 | Msa1407900:intron | 40.0% | |
| CTATGGAGCCCACATATATT+TGG | - | tig0023329:39997-40016 | None:intergenic | 40.0% | |
| TGCATTTCTTCGCTGTTTAG+AGG | - | tig0023329:40033-40052 | None:intergenic | 40.0% | |
| CACAGCTTGCAAAGAAAGAA+GGG | - | tig0023329:40091-40110 | None:intergenic | 40.0% | |
| TATGGAGCAAAATGGATAGC+AGG | + | tig0023329:40266-40285 | Msa1407900:intron | 40.0% | |
| ! | AACTAAGGGTGTGTTTGGTT+CGG | - | tig0023329:40758-40777 | None:intergenic | 40.0% |
| CATTGTATCTATGTCGTGTC+TGG | + | tig0023329:41026-41045 | Msa1407900:intron | 40.0% | |
| TCGTGTCTGGGAAAATACTT+GGG | + | tig0023329:41039-41058 | Msa1407900:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | tig0023329:41070-41089 | Msa1407900:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | tig0023329:41071-41090 | Msa1407900:intron | 40.0% | |
| GTGGCTCAGATTTAATGTCA+CGG | + | tig0023329:41155-41174 | Msa1407900:intron | 40.0% | |
| ! | CAATGGATTCGTTCAAACAG+TGG | - | tig0023329:41242-41261 | None:intergenic | 40.0% |
| CACTGTTTGAACGAATCCAT+TGG | + | tig0023329:41240-41259 | Msa1407900:intron | 40.0% | |
| !! | AATTGCTAGTTCTAGCAGAG+AGG | - | tig0023329:41404-41423 | None:intergenic | 40.0% |
| CCGGTTTAATTGACCTACTT+TGG | + | tig0023329:41638-41657 | Msa1407900:intron | 40.0% | |
| ATAGGTCAATTATACCGGGA+CGG | - | tig0023329:41748-41767 | None:intergenic | 40.0% | |
| GTCTGGTCTGCTTAACTATA+TGG | + | tig0023329:42200-42219 | Msa1407900:CDS | 40.0% | |
| GGTCTGCTTAACTATATGGA+TGG | + | tig0023329:42204-42223 | Msa1407900:CDS | 40.0% | |
| AGCCAAGATTCTGAATGCTT+TGG | - | tig0023329:42355-42374 | None:intergenic | 40.0% | |
| AATTTGTCACACAACTGAGG+AGG | - | tig0023329:42596-42615 | None:intergenic | 40.0% | |
| AAACAACATGAGACCCCCAA+TGG | + | tig0023329:38668-38687 | Msa1407900:exon | 45.0% | |
| AGAGAAACGACCAACCATTG+GGG | - | tig0023329:38685-38704 | None:intergenic | 45.0% | |
| GAAGAGAAACGACCAACCAT+TGG | - | tig0023329:38687-38706 | None:intergenic | 45.0% | |
| TTATATGGTCCACCAGGAAC+TGG | + | tig0023329:39464-39483 | Msa1407900:CDS | 45.0% | |
| ! | CTAGATTTTCCAGTTCCTGG+TGG | - | tig0023329:39476-39495 | None:intergenic | 45.0% |
| GATAGAGGAGAGAGAGATAG+AGG | + | tig0023329:39917-39936 | Msa1407900:intron | 45.0% | |
| GCACAGCTTGCAAAGAAAGA+AGG | - | tig0023329:40092-40111 | None:intergenic | 45.0% | |
| ! | GGAGTAACTAAGGGTGTGTT+TGG | - | tig0023329:40763-40782 | None:intergenic | 45.0% |
| ACGCCTAACCACTTCATATC+TGG | - | tig0023329:40922-40941 | None:intergenic | 45.0% | |
| GTCGTGTCTGGGAAAATACT+TGG | + | tig0023329:41038-41057 | Msa1407900:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | - | tig0023329:41078-41097 | None:intergenic | 45.0% | |
| GGGCCACACAAATATACTCA+TGG | + | tig0023329:41091-41110 | Msa1407900:intron | 45.0% | |
| ACATACACTACCAGACACGA+CGG | - | tig0023329:41206-41225 | None:intergenic | 45.0% | |
| TTCAGGTCTAATGGTAGGTG+AGG | - | tig0023329:41295-41314 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | - | tig0023329:41636-41655 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | + | tig0023329:41940-41959 | Msa1407900:intron | 45.0% | |
| AAATAATACTCCCTCCGTCC+CGG | - | tig0023329:41957-41976 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | + | tig0023329:41940-41959 | Msa1407900:intron | 45.0% | |
| ! | GATGGTTTGTGGTCAAGTTG+TGG | + | tig0023329:42222-42241 | Msa1407900:CDS | 45.0% |
| ! | TTTGTGGTCAAGTTGTGGAG+AGG | + | tig0023329:42227-42246 | Msa1407900:CDS | 45.0% |
| CTGGGTCTACTTTGTCCTTA+TGG | - | tig0023329:42278-42297 | None:intergenic | 45.0% | |
| TATGCATGTCCATACGACCA+GGG | - | tig0023329:42311-42330 | None:intergenic | 45.0% | |
| ATATGCATGTCCATACGACC+AGG | - | tig0023329:42312-42331 | None:intergenic | 45.0% | |
| ! | GGCCAAAGCATTCAGAATCT+TGG | + | tig0023329:42350-42369 | Msa1407900:CDS | 45.0% |
| GAAGATCCTGATGTTGCTCT+TGG | + | tig0023329:42489-42508 | Msa1407900:CDS | 45.0% | |
| !!! | TTTTTTTTTTTTTACTTTTA+CGG | + | tig0023329:40192-40211 | Msa1407900:intron | 5.0% |
| !! | ATTAATTATAGTAATAATTA+TGG | + | tig0023329:40248-40267 | Msa1407900:intron | 5.0% |
| AACATGAGACCCCCAATGGT+TGG | + | tig0023329:38672-38691 | Msa1407900:exon | 50.0% | |
| GAGAAACGACCAACCATTGG+GGG | - | tig0023329:38684-38703 | None:intergenic | 50.0% | |
| CTGGCCACCTTGTCTTGAAT+TGG | + | tig0023329:40115-40134 | Msa1407900:intron | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | - | tig0023329:41632-41651 | None:intergenic | 50.0% | |
| AAGTAGTACTACCTCCGTCC+CGG | + | tig0023329:41731-41750 | Msa1407900:intron | 50.0% | |
| ATACTCTGCCACTACAGCAG+GGG | - | tig0023329:42457-42476 | None:intergenic | 50.0% | |
| GATACTCTGCCACTACAGCA+GGG | - | tig0023329:42458-42477 | None:intergenic | 50.0% | |
| AGATACTCTGCCACTACAGC+AGG | - | tig0023329:42459-42478 | None:intergenic | 50.0% | |
| AGTGCTCCAAGAGCAACATC+AGG | - | tig0023329:42498-42517 | None:intergenic | 50.0% | |
| GTTGGCAAGCCTTGGAAACG+TGG | + | tig0023329:39434-39453 | Msa1407900:CDS | 55.0% | |
| TCTTTGCAAGCTGTGCACGC+TGG | + | tig0023329:40096-40115 | Msa1407900:intron | 55.0% | |
| GAAGTGGTTAGGCGTGTCTC+AGG | + | tig0023329:40927-40946 | Msa1407900:intron | 55.0% | |
| AGACACGACGGACAGCACTT+GGG | - | tig0023329:41194-41213 | None:intergenic | 55.0% | |
| CCTCTTCGCACGCATTCCAA+TGG | - | tig0023329:41259-41278 | None:intergenic | 55.0% | |
| CCATTGGAATGCGTGCGAAG+AGG | + | tig0023329:41256-41275 | Msa1407900:intron | 55.0% | |
| TGGTAGGTGAGGCAGCAAGT+GGG | - | tig0023329:41284-41303 | None:intergenic | 55.0% | |
| ATGGTAGGTGAGGCAGCAAG+TGG | - | tig0023329:41285-41304 | None:intergenic | 55.0% | |
| AACTAGTACTCCCTCCGTCC+CGG | + | tig0023329:41619-41638 | Msa1407900:intron | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | - | tig0023329:41633-41652 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | tig0023329:41745-41764 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | tig0023329:41944-41963 | Msa1407900:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | tig0023329:41944-41963 | Msa1407900:intron | 55.0% | |
| AAGTAGTACTCCCTCCGTCC+CGG | - | tig0023329:42077-42096 | None:intergenic | 55.0% | |
| ATTGTTGCGCCCTGGTCGTA+TGG | + | tig0023329:42299-42318 | Msa1407900:CDS | 55.0% | |
| AGATGTCACCCCTGCTGTAG+TGG | + | tig0023329:42446-42465 | Msa1407900:CDS | 55.0% | |
| CAGACACGACGGACAGCACT+TGG | - | tig0023329:41195-41214 | None:intergenic | 60.0% | |
| ! | CAAGTGCTGTCCGTCGTGTC+TGG | + | tig0023329:41193-41212 | Msa1407900:intron | 60.0% |
| GGTCAGTTATTCCGGGACGG+AGG | + | tig0023329:41943-41962 | Msa1407900:intron | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | tig0023329:41943-41962 | Msa1407900:intron | 60.0% | |
| GACCAGGGCGCAACAATGCT+GGG | - | tig0023329:42296-42315 | None:intergenic | 60.0% | |
| GACCCAGCATTGTTGCGCCC+TGG | + | tig0023329:42291-42310 | Msa1407900:CDS | 65.0% | |
| CGACCAGGGCGCAACAATGC+TGG | - | tig0023329:42297-42316 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023329 | gene | 38613 | 42932 | 38613 | ID=Msa1407900;Name=Msa1407900 |
| tig0023329 | mRNA | 38613 | 42932 | 38613 | ID=Msa1407900-mRNA-1;Parent=Msa1407900;Name=Msa1407900-mRNA-1;_AED=0.34;_eAED=0.34;_QI=62|1|1|1|1|1|2|342|485 |
| tig0023329 | exon | 38613 | 39706 | 38613 | ID=Msa1407900-mRNA-1:exon:25342;Parent=Msa1407900-mRNA-1 |
| tig0023329 | exon | 42165 | 42932 | 42165 | ID=Msa1407900-mRNA-1:exon:25343;Parent=Msa1407900-mRNA-1 |
| tig0023329 | five_prime_UTR | 38613 | 38674 | 38613 | ID=Msa1407900-mRNA-1:five_prime_utr;Parent=Msa1407900-mRNA-1 |
| tig0023329 | CDS | 38675 | 39706 | 38675 | ID=Msa1407900-mRNA-1:cds;Parent=Msa1407900-mRNA-1 |
| tig0023329 | CDS | 42165 | 42590 | 42165 | ID=Msa1407900-mRNA-1:cds;Parent=Msa1407900-mRNA-1 |
| tig0023329 | three_prime_UTR | 42591 | 42932 | 42591 | ID=Msa1407900-mRNA-1:three_prime_utr;Parent=Msa1407900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
