Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774470 | XP_003615463.1 | 96.804 | 219 | 7 | 0 | 1 | 219 | 1 | 219 | 1.70e-156 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774470 | sp|O24496|GLO2C_ARATH | 76.712 | 219 | 51 | 0 | 1 | 219 | 1 | 219 | 1.35e-127 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774470 | G7KDB9 | 96.804 | 219 | 7 | 0 | 1 | 219 | 1 | 219 | 8.10e-157 | 444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0740810 | Msa0774470 | 0.827243 | 1.742376e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774470 | MtrunA17_Chr5g0428611 | 96.804 | 219 | 7 | 0 | 1 | 219 | 1 | 219 | 1.56e-160 | 444 |
| Msa0774470 | MtrunA17_Chr4g0033721 | 40.807 | 223 | 121 | 6 | 1 | 220 | 62 | 276 | 3.19e-44 | 150 |
| Msa0774470 | MtrunA17_Chr2g0329571 | 40.359 | 223 | 122 | 6 | 1 | 220 | 76 | 290 | 1.14e-43 | 149 |
| Msa0774470 | MtrunA17_Chr2g0313641 | 39.205 | 176 | 91 | 8 | 12 | 176 | 58 | 228 | 9.69e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774470 | AT3G10850.1 | 76.712 | 219 | 51 | 0 | 1 | 219 | 1 | 219 | 1.37e-128 | 363 |
| Msa0774470 | AT2G31350.1 | 41.704 | 223 | 119 | 6 | 1 | 220 | 71 | 285 | 4.04e-54 | 176 |
| Msa0774470 | AT2G31350.2 | 41.704 | 223 | 119 | 6 | 1 | 220 | 70 | 284 | 4.06e-54 | 176 |
| Msa0774470 | AT1G06130.2 | 42.152 | 223 | 118 | 6 | 1 | 220 | 75 | 289 | 9.10e-53 | 173 |
| Msa0774470 | AT1G06130.1 | 42.152 | 223 | 118 | 6 | 1 | 220 | 76 | 290 | 9.64e-53 | 173 |
| Msa0774470 | AT2G43430.3 | 40.359 | 223 | 122 | 6 | 1 | 220 | 33 | 247 | 8.25e-48 | 159 |
| Msa0774470 | AT2G43430.2 | 40.359 | 223 | 122 | 6 | 1 | 220 | 60 | 274 | 2.28e-47 | 159 |
| Msa0774470 | AT2G43430.1 | 40.359 | 223 | 122 | 6 | 1 | 220 | 78 | 292 | 2.78e-47 | 159 |
| Msa0774470 | AT2G31350.3 | 43.646 | 181 | 91 | 6 | 1 | 178 | 71 | 243 | 3.03e-44 | 149 |
| Msa0774470 | AT1G53580.1 | 36.782 | 174 | 98 | 7 | 12 | 176 | 64 | 234 | 1.46e-24 | 99.0 |
| Msa0774470 | AT1G53580.2 | 36.782 | 174 | 98 | 7 | 12 | 176 | 64 | 234 | 1.52e-24 | 99.0 |
Find 92 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGCTGATATTAATATTT+TGG | 0.136740 | 5_2:+50719289 | Msa0774470:CDS |
| CAATTGAGCCAGACAATTTA+AGG | 0.138690 | 5_2:+50723178 | Msa0774470:CDS |
| GCCAGACAATTTAAGGATAT+TGG | 0.172262 | 5_2:+50723185 | Msa0774470:CDS |
| AAATGGGACATCTTAGTATT+TGG | 0.174114 | 5_2:-50724339 | None:intergenic |
| AATATGAATAATTGTCTTCT+AGG | 0.198594 | 5_2:-50718024 | None:intergenic |
| AATTCACCAGTTCAAGCTTT+AGG | 0.250356 | 5_2:+50724071 | Msa0774470:CDS |
| TTCAAGCTTTAGGAGAATTA+AGG | 0.267781 | 5_2:+50724081 | Msa0774470:exon |
| AGAACTTTCTCGGGTTCAAC+TGG | 0.279688 | 5_2:-50718172 | None:intergenic |
| CACATAAGTTATTATGTTAC+TGG | 0.296178 | 5_2:+50720323 | Msa0774470:CDS |
| TCCAATATCCTTAAATTGTC+TGG | 0.300104 | 5_2:-50723186 | None:intergenic |
| TGTTGCATACATATCAATAA+AGG | 0.304792 | 5_2:+50724174 | Msa0774470:three_prime_UTR |
| TGTTGTGTTGTGGTTGAATC+GGG | 0.333803 | 5_2:+50717958 | Msa0774470:five_prime_UTR |
| TCTTCTTTACAGTTCATTGC+TGG | 0.336326 | 5_2:+50721707 | Msa0774470:intron |
| TATAAAATATAGTTATTTAT+CGG | 0.341401 | 5_2:+50717886 | Msa0774470:five_prime_UTR |
| TGGTTTGCATGAAATTAAAA+TGG | 0.343671 | 5_2:+50724237 | Msa0774470:three_prime_UTR |
| ACAAAAGAGGAAGATGAAAT+AGG | 0.345251 | 5_2:-50724154 | None:intergenic |
| AGAAATAGACAGGAGAAAAT+AGG | 0.357240 | 5_2:-50724398 | None:intergenic |
| AGTAAATGACATGAATGAAA+TGG | 0.365096 | 5_2:-50724356 | None:intergenic |
| TGCCAGAGGCATGTCATGTT+AGG | 0.367537 | 5_2:+50724263 | Msa0774470:three_prime_UTR |
| TTACAGTTCATTGCTGGTTG+TGG | 0.367935 | 5_2:+50721713 | Msa0774470:intron |
| TGTACTGATGCACTTGAAAA+TGG | 0.382962 | 5_2:+50719251 | Msa0774470:CDS |
| TACAGTTCATTGCTGGTTGT+GGG | 0.407410 | 5_2:+50721714 | Msa0774470:intron |
| AGAAACTTCTAGAACTTTCT+CGG | 0.411249 | 5_2:-50718182 | None:intergenic |
| CAGTCACTCTCTGTAACATT+AGG | 0.418249 | 5_2:+50721770 | Msa0774470:CDS |
| ATGTTGTGTTGTGGTTGAAT+CGG | 0.421637 | 5_2:+50717957 | Msa0774470:five_prime_UTR |
| ATGTATATACTTGAACAGTT+TGG | 0.422966 | 5_2:+50724217 | Msa0774470:three_prime_UTR |
| ATAATAACTTATGTGACCTT+TGG | 0.423129 | 5_2:-50720315 | None:intergenic |
| CAGTAAACTCGAGTTGGCTT+TGG | 0.432953 | 5_2:-50721800 | None:intergenic |
| TCAATGGTTGAGGGAATTGT+TGG | 0.437025 | 5_2:-50723249 | None:intergenic |
| GCTCAAAATCAGCGGCAAAC+TGG | 0.437847 | 5_2:+50723222 | Msa0774470:CDS |
| CATAAATTCATACTACATAT+AGG | 0.445727 | 5_2:-50724197 | None:intergenic |
| TAAGGAAGGTGAAAGACAAC+TGG | 0.446395 | 5_2:+50724099 | Msa0774470:three_prime_UTR |
| CCACCGTAGACCTTGATTCC+AGG | 0.459806 | 5_2:-50719206 | None:intergenic |
| AATTCTCCTAAAGCTTGAAC+TGG | 0.461100 | 5_2:-50724077 | None:intergenic |
| AAACGAGAAGATAAAGGAAT+TGG | 0.464557 | 5_2:+50719181 | Msa0774470:CDS |
| TGGTGGAAACGAGAAGATAA+AGG | 0.465352 | 5_2:+50719175 | Msa0774470:CDS |
| GTAAATGACATGAATGAAAT+GGG | 0.466380 | 5_2:-50724355 | None:intergenic |
| AAATGTACTGCAGGAGAAGA+TGG | 0.466613 | 5_2:+50724043 | Msa0774470:intron |
| GCTTTCCAACTCGTCCTCAA+TGG | 0.482732 | 5_2:-50723265 | None:intergenic |
| GGAATTGGTGCCTGGAATCA+AGG | 0.483578 | 5_2:+50719196 | Msa0774470:CDS |
| CTAGAAGTTTCTAATTCGCT+TGG | 0.483743 | 5_2:+50718193 | Msa0774470:CDS |
| CAACTCGTCCTCAATGGTTG+AGG | 0.484204 | 5_2:-50723259 | None:intergenic |
| AAGATAAAGGAATTGGTGCC+TGG | 0.495288 | 5_2:+50719188 | Msa0774470:CDS |
| TCCTTACTACTCACCATCAC+TGG | 0.496924 | 5_2:+50718233 | Msa0774470:CDS |
| GAAACTTCTAGAACTTTCTC+GGG | 0.497180 | 5_2:-50718181 | None:intergenic |
| ATAACAATCGCTTCGGTGGA+TGG | 0.504718 | 5_2:-50717931 | None:intergenic |
| GCCAGAGGCATGTCATGTTA+GGG | 0.511875 | 5_2:+50724264 | Msa0774470:three_prime_UTR |
| ACCAGTGATGGTGAGTAGTA+AGG | 0.512723 | 5_2:-50718234 | None:intergenic |
| AACTCGTCCTCAATGGTTGA+GGG | 0.518600 | 5_2:-50723258 | None:intergenic |
| AATGGTGATAAGGTGCATCT+TGG | 0.529288 | 5_2:+50719269 | Msa0774470:CDS |
| TCCCTAACATGACATGCCTC+TGG | 0.530451 | 5_2:-50724265 | None:intergenic |
| AATGTACTGCAGGAGAAGAT+GGG | 0.531210 | 5_2:+50724044 | Msa0774470:intron |
| TGTTACTGGCAAAGAGGATG+AGG | 0.533558 | 5_2:+50720337 | Msa0774470:CDS |
| TGCCATACCAAGGTGTGTGA+AGG | 0.539361 | 5_2:-50719313 | None:intergenic |
| ACATAACATAACAATCGCTT+CGG | 0.541350 | 5_2:-50717938 | None:intergenic |
| GAATAATTGTCTTCTAGGCA+TGG | 0.541753 | 5_2:-50718019 | None:intergenic |
| TGATATGTATGCAACAAAAG+AGG | 0.545141 | 5_2:-50724167 | None:intergenic |
| TGCACTTGAAAATGGTGATA+AGG | 0.547264 | 5_2:+50719259 | Msa0774470:CDS |
| TCGCTTCGGTGGATGGATGA+TGG | 0.553680 | 5_2:-50717924 | None:intergenic |
| TACTAAAGAAGCTGCTGCGG+TGG | 0.557172 | 5_2:+50718147 | Msa0774470:CDS |
| TGTTATGTTATGTTGTGTTG+TGG | 0.557638 | 5_2:+50717948 | Msa0774470:five_prime_UTR |
| GGATACATGTATGTTAATGT+TGG | 0.558261 | 5_2:+50724311 | Msa0774470:three_prime_UTR |
| ATAGGAGTGAATGAGAAGGT+TGG | 0.562627 | 5_2:-50724136 | None:intergenic |
| GTGCCTGGAATCAAGGTCTA+CGG | 0.571178 | 5_2:+50719203 | Msa0774470:CDS |
| TGGCCACAGTAAACTCGAGT+TGG | 0.572496 | 5_2:-50721806 | None:intergenic |
| GGCTCAATTGATAATGTCAA+AGG | 0.572860 | 5_2:+50719227 | Msa0774470:CDS |
| GAACTTTCTCGGGTTCAACT+GGG | 0.573905 | 5_2:-50718171 | None:intergenic |
| GCCATACCAAGGTGTGTGAA+GGG | 0.577790 | 5_2:-50719312 | None:intergenic |
| AATTAAAATGGCAGTGCCAG+AGG | 0.581422 | 5_2:+50724249 | Msa0774470:three_prime_UTR |
| AACAATTCCCTCAACCATTG+AGG | 0.581790 | 5_2:+50723251 | Msa0774470:CDS |
| CTTCTAGGCATGGAATGTGA+TGG | 0.582592 | 5_2:-50718009 | None:intergenic |
| TGGCAAAGAGGATGAGGACC+CGG | 0.591483 | 5_2:+50720343 | Msa0774470:CDS |
| TGGATTGTAATTAGCACTGT+CGG | 0.593434 | 5_2:+50724290 | Msa0774470:three_prime_UTR |
| GGCATGTCATGTTAGGGACA+TGG | 0.596058 | 5_2:+50724270 | Msa0774470:three_prime_UTR |
| TAACATAACAATCGCTTCGG+TGG | 0.598033 | 5_2:-50717935 | None:intergenic |
| TGAAATAGGAGTGAATGAGA+AGG | 0.610446 | 5_2:-50724140 | None:intergenic |
| TTATTATGTTACTGGCAAAG+AGG | 0.617601 | 5_2:+50720331 | Msa0774470:CDS |
| GTTGTGTTGTGGTTGAATCG+GGG | 0.619110 | 5_2:+50717959 | Msa0774470:five_prime_UTR |
| TGGTTGAGGGAATTGTTGGT+TGG | 0.624141 | 5_2:-50723245 | None:intergenic |
| AACTTATGTGACCTTTGGTG+TGG | 0.628520 | 5_2:-50720310 | None:intergenic |
| GGATGGATGATGGTACACTT+TGG | 0.630591 | 5_2:-50717914 | None:intergenic |
| GGTAAGTAATGAACCAGTGA+TGG | 0.633877 | 5_2:-50718246 | None:intergenic |
| AGCTTTAGGAGAATTAAGGA+AGG | 0.648528 | 5_2:+50724085 | Msa0774470:exon |
| GAGTACTAAAGAAGCTGCTG+CGG | 0.650054 | 5_2:+50718144 | Msa0774470:CDS |
| GAAGGTGAAAGACAACTGGA+AGG | 0.652875 | 5_2:+50724103 | Msa0774470:three_prime_UTR |
| ATGTACTGCAGGAGAAGATG+GGG | 0.659685 | 5_2:+50724045 | Msa0774470:intron |
| AAGGTGAAAGACAACTGGAA+GGG | 0.668349 | 5_2:+50724104 | Msa0774470:three_prime_UTR |
| TGTGGCAGGGATCATGCTGG+TGG | 0.668772 | 5_2:+50719158 | Msa0774470:intron |
| CCTGGAATCAAGGTCTACGG+TGG | 0.671932 | 5_2:+50719206 | Msa0774470:CDS |
| TAACCTGGGCTCAAAATCAG+CGG | 0.672912 | 5_2:+50723214 | Msa0774470:CDS |
| TCGAGTTTACTGTGGCCATG+AGG | 0.690000 | 5_2:+50721811 | Msa0774470:CDS |
| AAGCCAACTCGAGTTTACTG+TGG | 0.744582 | 5_2:+50721803 | Msa0774470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATATTATATTTAGAC+CGG | + | chr5_2:50719424-50719443 | Msa0774470:intron | 10.0% |
| !!! | TAAATATTATTCTTTTACAA+TGG | + | chr5_2:50719883-50719902 | Msa0774470:intron | 10.0% |
| !!! | AAATATTATTCTTTTACAAT+GGG | + | chr5_2:50719884-50719903 | Msa0774470:intron | 10.0% |
| !!! | TTTTTACTTTTATCAAATTT+TGG | - | chr5_2:50720612-50720631 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTGTTTTATCT+TGG | + | chr5_2:50721370-50721389 | Msa0774470:intron | 10.0% |
| !!! | AATTTGTATAATCAAAATTT+TGG | + | chr5_2:50723687-50723706 | Msa0774470:intron | 10.0% |
| !!! | ATTTGTATAATCAAAATTTT+GGG | + | chr5_2:50723718-50723737 | Msa0774470:intron | 10.0% |
| !!! | TTTTAAATATATGTCAATTT+TGG | + | chr5_2:50723839-50723858 | Msa0774470:intron | 10.0% |
| !! | TAACTTATACTAATAAAGTT+TGG | - | chr5_2:50718624-50718643 | None:intergenic | 15.0% |
| !! | TAAGAATTAAATATGAAGTA+GGG | + | chr5_2:50718908-50718927 | Msa0774470:intron | 15.0% |
| !! | AATTATATTATATTTAGACC+GGG | + | chr5_2:50719425-50719444 | Msa0774470:intron | 15.0% |
| !!! | ATGAGTTTGTTAAAAATAAT+TGG | - | chr5_2:50719737-50719756 | None:intergenic | 15.0% |
| !! | GTTTATTAATCAATGTAAAT+AGG | + | chr5_2:50719855-50719874 | Msa0774470:intron | 15.0% |
| !! | TGATAAAAGTAAAAACTTAA+AGG | + | chr5_2:50720617-50720636 | Msa0774470:intron | 15.0% |
| !! | CCTGATAAAATAAATTAAAA+GGG | + | chr5_2:50721566-50721585 | Msa0774470:intron | 15.0% |
| !!! | TTTTGCATAAATTTTATGTT+TGG | + | chr5_2:50721601-50721620 | Msa0774470:intron | 15.0% |
| !! | ATTGAAATGAAATATATCAT+AGG | + | chr5_2:50721853-50721872 | Msa0774470:intron | 15.0% |
| !! | TTGAAATGAAATATATCATA+GGG | + | chr5_2:50721854-50721873 | Msa0774470:intron | 15.0% |
| !! | TAAGTTTCCAATTTAATTAA+TGG | + | chr5_2:50721969-50721988 | Msa0774470:intron | 15.0% |
| !!! | ATATTTTATTTTCTCAATCA+GGG | - | chr5_2:50722499-50722518 | None:intergenic | 15.0% |
| !! | TTTGCTGAAAAATATATATT+TGG | + | chr5_2:50722815-50722834 | Msa0774470:intron | 15.0% |
| !! | ATGAAAAAAATTTATTTGGA+AGG | + | chr5_2:50722870-50722889 | Msa0774470:intron | 15.0% |
| !!! | TGACATATATTTAAAATTGA+AGG | - | chr5_2:50723835-50723854 | None:intergenic | 15.0% |
| !! | ATTTACATTAATACATTACA+AGG | - | chr5_2:50724027-50724046 | None:intergenic | 15.0% |
| !! | AATATGAATAATTGTCTTCT+AGG | - | chr5_2:50718027-50718046 | None:intergenic | 20.0% |
| !!! | AAATTCTAATTTGAAGTGTT+TGG | - | chr5_2:50718270-50718289 | None:intergenic | 20.0% |
| !!! | TGCATAAGTTATTTTTCATA+AGG | - | chr5_2:50718448-50718467 | None:intergenic | 20.0% |
| !! | TCAAAATTAGTTACAACTTA+TGG | + | chr5_2:50718671-50718690 | Msa0774470:intron | 20.0% |
| !! | GTAAGAATTAAATATGAAGT+AGG | + | chr5_2:50718907-50718926 | Msa0774470:intron | 20.0% |
| !!! | ATTTTCTTGGTTATTTTGTT+TGG | + | chr5_2:50719072-50719091 | Msa0774470:intron | 20.0% |
| !! | TCTTTCGTTATTCTTTATTA+TGG | - | chr5_2:50719513-50719532 | None:intergenic | 20.0% |
| !!! | TACATTGATTAATAAACGTA+TGG | - | chr5_2:50719852-50719871 | None:intergenic | 20.0% |
| !!! | AGACAAGTATATAGTTTTAT+TGG | - | chr5_2:50720063-50720082 | None:intergenic | 20.0% |
| !! | ATTATCAACCATAACATATA+AGG | - | chr5_2:50720130-50720149 | None:intergenic | 20.0% |
| !!! | AGTGAAGGTATATAAATTTT+AGG | + | chr5_2:50720493-50720512 | Msa0774470:intron | 20.0% |
| !! | ATGTAGATAAATTAATCGTA+GGG | - | chr5_2:50720723-50720742 | None:intergenic | 20.0% |
| !! | AATGTAGATAAATTAATCGT+AGG | - | chr5_2:50720724-50720743 | None:intergenic | 20.0% |
| !!! | TTTTGATTGTTTTCATTTTC+TGG | + | chr5_2:50721010-50721029 | Msa0774470:intron | 20.0% |
| !!! | TTTGATTGTTTTCATTTTCT+GGG | + | chr5_2:50721011-50721030 | Msa0774470:intron | 20.0% |
| !! | AATTCATATATGTGAAGTTT+GGG | - | chr5_2:50721090-50721109 | None:intergenic | 20.0% |
| !! | AAATTCATATATGTGAAGTT+TGG | - | chr5_2:50721091-50721110 | None:intergenic | 20.0% |
| !!! | TCACATATATGAATTTTTCT+AGG | + | chr5_2:50721095-50721114 | Msa0774470:intron | 20.0% |
| !!! | CACATATATGAATTTTTCTA+GGG | + | chr5_2:50721096-50721115 | Msa0774470:intron | 20.0% |
| !!! | ACATATATGAATTTTTCTAG+GGG | + | chr5_2:50721097-50721116 | Msa0774470:intron | 20.0% |
| !!! | TATTTTGTATTTTCTGTTGA+AGG | + | chr5_2:50721189-50721208 | Msa0774470:intron | 20.0% |
| !!! | ATTTTGTATTTTCTGTTGAA+GGG | + | chr5_2:50721190-50721209 | Msa0774470:intron | 20.0% |
| !! | TAGAACCAAAAAAAGAAATA+TGG | - | chr5_2:50721287-50721306 | None:intergenic | 20.0% |
| !! | GCCTGATAAAATAAATTAAA+AGG | + | chr5_2:50721565-50721584 | Msa0774470:intron | 20.0% |
| !!! | CCCTTTTAATTTATTTTATC+AGG | - | chr5_2:50721569-50721588 | None:intergenic | 20.0% |
| !! | ATATATTTCATTTCAATGAC+GGG | - | chr5_2:50721850-50721869 | None:intergenic | 20.0% |
| !! | GATATATTTCATTTCAATGA+CGG | - | chr5_2:50721851-50721870 | None:intergenic | 20.0% |
| !! | TTAAATTCGTTGTTAAAAAC+TGG | + | chr5_2:50722457-50722476 | Msa0774470:intron | 20.0% |
| !! | TAAATTCGTTGTTAAAAACT+GGG | + | chr5_2:50722458-50722477 | Msa0774470:intron | 20.0% |
| !!! | GATATTTTATTTTCTCAATC+AGG | - | chr5_2:50722500-50722519 | None:intergenic | 20.0% |
| !!! | TATTTTTTGTTTCTCAAAGT+AGG | + | chr5_2:50722543-50722562 | Msa0774470:intron | 20.0% |
| !! | TTCTTTATAATACACTTGTT+TGG | + | chr5_2:50722792-50722811 | Msa0774470:intron | 20.0% |
| !!! | CCAAATAAATTTTTTTCATC+TGG | - | chr5_2:50722869-50722888 | None:intergenic | 20.0% |
| !! | CCAGATGAAAAAAATTTATT+TGG | + | chr5_2:50722866-50722885 | Msa0774470:intron | 20.0% |
| !! | CTCTAGTATTAATGATATAA+GGG | - | chr5_2:50723103-50723122 | None:intergenic | 20.0% |
| !! | ACTCTAGTATTAATGATATA+AGG | - | chr5_2:50723104-50723123 | None:intergenic | 20.0% |
| !!! | TACTCATTTAGAATCAATTT+AGG | - | chr5_2:50723385-50723404 | None:intergenic | 20.0% |
| !! | GGTGAATATAAATAAATTCA+AGG | - | chr5_2:50723478-50723497 | None:intergenic | 20.0% |
| !! | ACGAATCTAATTAAATGAAA+AGG | - | chr5_2:50723747-50723766 | None:intergenic | 20.0% |
| !!! | AATATTGTAATCTTCACTTT+TGG | + | chr5_2:50723780-50723799 | Msa0774470:intron | 20.0% |
| !!! | AAATCAAACGGAAATTTTTT+GGG | - | chr5_2:50723808-50723827 | None:intergenic | 20.0% |
| !!! | AAAATCAAACGGAAATTTTT+TGG | - | chr5_2:50723809-50723828 | None:intergenic | 20.0% |
| !!! | AAAATTGACACACATTTTTT+AGG | + | chr5_2:50723920-50723939 | Msa0774470:intron | 20.0% |
| !!! | AAATTGACACACATTTTTTA+GGG | + | chr5_2:50723921-50723940 | Msa0774470:intron | 20.0% |
| !! | CATAAATTCATACTACATAT+AGG | - | chr5_2:50724200-50724219 | None:intergenic | 20.0% |
| !!! | TTCTTCACTTTTTCATTTTC+TGG | + | chr5_2:50718064-50718083 | Msa0774470:intron | 25.0% |
| !!! | TCTTCACTTTTTCATTTTCT+GGG | + | chr5_2:50718065-50718084 | Msa0774470:intron | 25.0% |
| ! | CAATCAATCTATGAATGAAT+TGG | + | chr5_2:50718089-50718108 | Msa0774470:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr5_2:50718549-50718568 | None:intergenic | 25.0% |
| !! | TAAACATTTGAGATAGCTTA+AGG | - | chr5_2:50718715-50718734 | None:intergenic | 25.0% |
| ! | GACTTATTAACAACTCATTT+AGG | - | chr5_2:50718752-50718771 | None:intergenic | 25.0% |
| ! | ACTCTAATTAAGTTTGTGTT+TGG | - | chr5_2:50718778-50718797 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+AGG | + | chr5_2:50718836-50718855 | Msa0774470:intron | 25.0% |
| !! | TGGAGCTGATATTAATATTT+TGG | + | chr5_2:50719289-50719308 | Msa0774470:CDS | 25.0% |
| !! | GTATATCAATGATAGTGAAA+TGG | + | chr5_2:50719556-50719575 | Msa0774470:intron | 25.0% |
| ! | ATTGATTGATAGAGTAAAGA+TGG | - | chr5_2:50719786-50719805 | None:intergenic | 25.0% |
| ! | TTAATCAATGTAAATAGGTC+AGG | + | chr5_2:50719860-50719879 | Msa0774470:intron | 25.0% |
| ! | TCTTTAGCACAAATCTTAAT+TGG | - | chr5_2:50719940-50719959 | None:intergenic | 25.0% |
| ! | ATAATATCACCATAAAAGCA+AGG | - | chr5_2:50720033-50720052 | None:intergenic | 25.0% |
| ! | ATAATAACTTATGTGACCTT+TGG | - | chr5_2:50720318-50720337 | None:intergenic | 25.0% |
| ! | CACATAAGTTATTATGTTAC+TGG | + | chr5_2:50720323-50720342 | Msa0774470:CDS | 25.0% |
| ! | CATGTAAGAAACTTAAAGAT+GGG | + | chr5_2:50720458-50720477 | Msa0774470:intron | 25.0% |
| ! | CTAAATAAAAAAATGCCCAA+GGG | - | chr5_2:50720543-50720562 | None:intergenic | 25.0% |
| !!! | TTGGGCATTTTTTTATTTAG+CGG | + | chr5_2:50720543-50720562 | Msa0774470:intron | 25.0% |
| ! | ACATCAAAATTGATGAAAGA+TGG | - | chr5_2:50720822-50720841 | None:intergenic | 25.0% |
| ! | CAAAAAACAAAGTCTAACAA+AGG | - | chr5_2:50720875-50720894 | None:intergenic | 25.0% |
| !!! | CTTTGTTAGACTTTGTTTTT+TGG | + | chr5_2:50720873-50720892 | Msa0774470:intron | 25.0% |
| !! | TTTTGTATTTTCTGTTGAAG+GGG | + | chr5_2:50721191-50721210 | Msa0774470:intron | 25.0% |
| ! | AAAAGAAATATGGACTCAAA+AGG | - | chr5_2:50721277-50721296 | None:intergenic | 25.0% |
| !!! | TGAGTCCATATTTCTTTTTT+TGG | + | chr5_2:50721279-50721298 | Msa0774470:intron | 25.0% |
| !!! | TTTTTTGGTTCTATAGTTCT+TGG | + | chr5_2:50721294-50721313 | Msa0774470:intron | 25.0% |
| ! | TTATGCACAATCATAACTTA+TGG | - | chr5_2:50721510-50721529 | None:intergenic | 25.0% |
| ! | TATATTTCATTTCAATGACG+GGG | - | chr5_2:50721849-50721868 | None:intergenic | 25.0% |
| ! | GACATCTCCATTAATTAAAT+TGG | - | chr5_2:50721979-50721998 | None:intergenic | 25.0% |
| ! | ATTTAATTAATGGAGATGTC+AGG | + | chr5_2:50721979-50721998 | Msa0774470:intron | 25.0% |
| !! | AAGAAGTTCACAATATTTTG+TGG | - | chr5_2:50722132-50722151 | None:intergenic | 25.0% |
| !! | CGAATTTAACTTTGAATTCT+AGG | - | chr5_2:50722446-50722465 | None:intergenic | 25.0% |
| ! | AATATCCGTCATTTCTTTAT+AGG | + | chr5_2:50722514-50722533 | Msa0774470:intron | 25.0% |
| !! | AGTAGGATAATTATTCCTTT+TGG | + | chr5_2:50722560-50722579 | Msa0774470:intron | 25.0% |
| !!! | AATTTTTTTCATCTGGCAAA+GGG | - | chr5_2:50722862-50722881 | None:intergenic | 25.0% |
| !!! | AAATTTTTTTCATCTGGCAA+AGG | - | chr5_2:50722863-50722882 | None:intergenic | 25.0% |
| !!! | TATAGTTTTTCTAGCAGAAA+AGG | + | chr5_2:50723057-50723076 | Msa0774470:intron | 25.0% |
| !!! | TGTTTTTTTTTTGCAGTACT+CGG | + | chr5_2:50723131-50723150 | Msa0774470:intron | 25.0% |
| ! | GATATTGGAAAAATTAACCT+GGG | + | chr5_2:50723200-50723219 | Msa0774470:CDS | 25.0% |
| !! | CTTTAAGTTAGAATCAATTG+TGG | - | chr5_2:50723423-50723442 | None:intergenic | 25.0% |
| !!! | AATCAAACGGAAATTTTTTG+GGG | - | chr5_2:50723807-50723826 | None:intergenic | 25.0% |
| ! | ATTGAAGGATCAAAATCAAA+CGG | - | chr5_2:50723820-50723839 | None:intergenic | 25.0% |
| ! | GCATGGTATAATTTCATATT+GGG | - | chr5_2:50723988-50724007 | None:intergenic | 25.0% |
| ! | AGCATGGTATAATTTCATAT+TGG | - | chr5_2:50723989-50724008 | None:intergenic | 25.0% |
| ! | TATTAATGTAAATGTACTGC+AGG | + | chr5_2:50724034-50724053 | Msa0774470:intron | 25.0% |
| ! | TGTTGCATACATATCAATAA+AGG | + | chr5_2:50724174-50724193 | Msa0774470:three_prime_UTR | 25.0% |
| ! | ATGTATATACTTGAACAGTT+TGG | + | chr5_2:50724217-50724236 | Msa0774470:three_prime_UTR | 25.0% |
| !! | TGGTTTGCATGAAATTAAAA+TGG | + | chr5_2:50724237-50724256 | Msa0774470:three_prime_UTR | 25.0% |
| ! | GTAAATGACATGAATGAAAT+GGG | - | chr5_2:50724358-50724377 | None:intergenic | 25.0% |
| ! | AGTAAATGACATGAATGAAA+TGG | - | chr5_2:50724359-50724378 | None:intergenic | 25.0% |
| ACATAACATAACAATCGCTT+CGG | - | chr5_2:50717941-50717960 | None:intergenic | 30.0% | |
| TGTTATGTTATGTTGTGTTG+TGG | + | chr5_2:50717948-50717967 | Msa0774470:five_prime_UTR | 30.0% | |
| !! | AGAAACTTCTAGAACTTTCT+CGG | - | chr5_2:50718185-50718204 | None:intergenic | 30.0% |
| AAAGAGAATATGTGCATGTT+TGG | + | chr5_2:50718406-50718425 | Msa0774470:intron | 30.0% | |
| AACTAGTATTAGACCTTGTT+TGG | - | chr5_2:50718852-50718871 | None:intergenic | 30.0% | |
| ACAAGGTCTAATACTAGTTA+AGG | + | chr5_2:50718853-50718872 | Msa0774470:intron | 30.0% | |
| ATTTAATCAAAGAGAGAACG+TGG | + | chr5_2:50719008-50719027 | Msa0774470:intron | 30.0% | |
| ! | TGAAAACAGTTGCATTTTCT+TGG | + | chr5_2:50719059-50719078 | Msa0774470:intron | 30.0% |
| ! | GTGATTTTTGTGTGATTTTG+TGG | + | chr5_2:50719140-50719159 | Msa0774470:intron | 30.0% |
| AAACGAGAAGATAAAGGAAT+TGG | + | chr5_2:50719181-50719200 | Msa0774470:CDS | 30.0% | |
| TTGACAATTAAGACTCTTGT+TGG | + | chr5_2:50719343-50719362 | Msa0774470:intron | 30.0% | |
| TAGACAAAACAATTAAGTCC+CGG | - | chr5_2:50719446-50719465 | None:intergenic | 30.0% | |
| ! | TATCAATGATAGTGAAATGG+TGG | + | chr5_2:50719559-50719578 | Msa0774470:intron | 30.0% |
| TTACACTTTACTCACTTTAG+AGG | - | chr5_2:50719672-50719691 | None:intergenic | 30.0% | |
| AGAGTAAAGATGGATATTAG+TGG | - | chr5_2:50719776-50719795 | None:intergenic | 30.0% | |
| AACAATGTGTTCTCATTTCT+GGG | - | chr5_2:50720095-50720114 | None:intergenic | 30.0% | |
| AAACAATGTGTTCTCATTTC+TGG | - | chr5_2:50720096-50720115 | None:intergenic | 30.0% | |
| GTTAATAATTATCACTCCTC+TGG | + | chr5_2:50720172-50720191 | Msa0774470:intron | 30.0% | |
| AGAATACTAAACAATACCAG+AGG | - | chr5_2:50720191-50720210 | None:intergenic | 30.0% | |
| GTATTCTATCTCTTATGTAG+TGG | + | chr5_2:50720204-50720223 | Msa0774470:intron | 30.0% | |
| TGTAAACAAGAGAGGTTAAA+GGG | - | chr5_2:50720265-50720284 | None:intergenic | 30.0% | |
| ATGTAAACAAGAGAGGTTAA+AGG | - | chr5_2:50720266-50720285 | None:intergenic | 30.0% | |
| ATGGTTTATGTAAACAAGAG+AGG | - | chr5_2:50720273-50720292 | None:intergenic | 30.0% | |
| TTATTATGTTACTGGCAAAG+AGG | + | chr5_2:50720331-50720350 | Msa0774470:CDS | 30.0% | |
| !! | TGTTTTTACTGGAGATACAT+TGG | + | chr5_2:50720367-50720386 | Msa0774470:CDS | 30.0% |
| GCATGTAAGAAACTTAAAGA+TGG | + | chr5_2:50720457-50720476 | Msa0774470:intron | 30.0% | |
| GCTAAATAAAAAAATGCCCA+AGG | - | chr5_2:50720544-50720563 | None:intergenic | 30.0% | |
| TTATTTAGCGGTAACTCATA+AGG | + | chr5_2:50720555-50720574 | Msa0774470:intron | 30.0% | |
| TTAACTTCATAACACTAGTG+AGG | - | chr5_2:50720585-50720604 | None:intergenic | 30.0% | |
| TTGTTACAATAAAACAGCGA+AGG | + | chr5_2:50720646-50720665 | Msa0774470:intron | 30.0% | |
| ATCGTAGGGTTAATCTTTAT+TGG | - | chr5_2:50720709-50720728 | None:intergenic | 30.0% | |
| ATGAGAAGAAGATTGTGTAA+GGG | - | chr5_2:50720763-50720782 | None:intergenic | 30.0% | |
| !!! | CCACTGATAAAGTTTTAGTT+TGG | - | chr5_2:50720963-50720982 | None:intergenic | 30.0% |
| CCAAACTAAAACTTTATCAG+TGG | + | chr5_2:50720960-50720979 | Msa0774470:intron | 30.0% | |
| GTGATGAGAATAAATGTCAT+TGG | + | chr5_2:50721133-50721152 | Msa0774470:intron | 30.0% | |
| ! | GAGAATAAATGTCATTGGTT+TGG | + | chr5_2:50721138-50721157 | Msa0774470:intron | 30.0% |
| GATACATACACACAGAAATA+TGG | - | chr5_2:50721345-50721364 | None:intergenic | 30.0% | |
| AAATGGGGAATGATTTAGTA+TGG | + | chr5_2:50721476-50721495 | Msa0774470:intron | 30.0% | |
| TTGTTTGATTGCAAAGATAC+TGG | + | chr5_2:50722069-50722088 | Msa0774470:intron | 30.0% | |
| TGTTTGATTGCAAAGATACT+GGG | + | chr5_2:50722070-50722089 | Msa0774470:intron | 30.0% | |
| ! | AGTTCACAATATTTTGTGGA+AGG | - | chr5_2:50722128-50722147 | None:intergenic | 30.0% |
| TGAACTTCTTGAGATATTAG+TGG | + | chr5_2:50722142-50722161 | Msa0774470:intron | 30.0% | |
| TTAACAACCAACAATTCCTT+GGG | - | chr5_2:50722181-50722200 | None:intergenic | 30.0% | |
| ! | TTGGTTGTTAAGTTGTAAAC+TGG | + | chr5_2:50722190-50722209 | Msa0774470:intron | 30.0% |
| TTGTAAACTGGTAAACATCT+TGG | + | chr5_2:50722202-50722221 | Msa0774470:intron | 30.0% | |
| TGTAAACTGGTAAACATCTT+GGG | + | chr5_2:50722203-50722222 | Msa0774470:intron | 30.0% | |
| TAGTTTCAATTCCTGTTGAA+TGG | + | chr5_2:50722276-50722295 | Msa0774470:intron | 30.0% | |
| GAATACAACATACAAGAAGT+TGG | + | chr5_2:50722316-50722335 | Msa0774470:intron | 30.0% | |
| !! | ACAAATTGAGTTCTGAATTC+AGG | + | chr5_2:50722364-50722383 | Msa0774470:intron | 30.0% |
| !! | CAAATTGAGTTCTGAATTCA+GGG | + | chr5_2:50722365-50722384 | Msa0774470:intron | 30.0% |
| GAAACAGTATTCACGTTTAA+TGG | - | chr5_2:50722391-50722410 | None:intergenic | 30.0% | |
| CTAAGCCTATAAAGAAATGA+CGG | - | chr5_2:50722522-50722541 | None:intergenic | 30.0% | |
| CTTCAAAAAAGAGAGATCAA+AGG | - | chr5_2:50722608-50722627 | None:intergenic | 30.0% | |
| ! | ACAAAAGTTTCGTCGTATTT+TGG | - | chr5_2:50722716-50722735 | None:intergenic | 30.0% |
| ! | AACAATAACCAGCCTATTTT+TGG | + | chr5_2:50722747-50722766 | Msa0774470:intron | 30.0% |
| !! | ACAATAACCAGCCTATTTTT+GGG | + | chr5_2:50722748-50722767 | Msa0774470:intron | 30.0% |
| GGAAGGAATTATAATGCAAT+AGG | + | chr5_2:50722887-50722906 | Msa0774470:intron | 30.0% | |
| GGAATTATAATGCAATAGGT+AGG | + | chr5_2:50722891-50722910 | Msa0774470:intron | 30.0% | |
| AAACCAATAATGCAACTTTG+AGG | + | chr5_2:50723006-50723025 | Msa0774470:intron | 30.0% | |
| AACCAATAATGCAACTTTGA+GGG | + | chr5_2:50723007-50723026 | Msa0774470:intron | 30.0% | |
| TCCAATATCCTTAAATTGTC+TGG | - | chr5_2:50723189-50723208 | None:intergenic | 30.0% | |
| GGATATTGGAAAAATTAACC+TGG | + | chr5_2:50723199-50723218 | Msa0774470:CDS | 30.0% | |
| !!! | TGTATGTTTGGTTCTAGTTT+TGG | + | chr5_2:50723354-50723373 | Msa0774470:intron | 30.0% |
| GAATACACTGATGTAAAAGT+GGG | - | chr5_2:50723499-50723518 | None:intergenic | 30.0% | |
| TGAATACACTGATGTAAAAG+TGG | - | chr5_2:50723500-50723519 | None:intergenic | 30.0% | |
| !!! | ATTTGTTTTACACCTGTGTT+TGG | - | chr5_2:50723599-50723618 | None:intergenic | 30.0% |
| AACAAATAGATCCTTGTTGA+TGG | + | chr5_2:50723612-50723631 | Msa0774470:intron | 30.0% | |
| ACAAATAGATCCTTGTTGAT+GGG | + | chr5_2:50723613-50723632 | Msa0774470:intron | 30.0% | |
| ! | ACTTCATCAGTCTAAAATGA+GGG | - | chr5_2:50723886-50723905 | None:intergenic | 30.0% |
| ! | AACTTCATCAGTCTAAAATG+AGG | - | chr5_2:50723887-50723906 | None:intergenic | 30.0% |
| !! | TTCAAGCTTTAGGAGAATTA+AGG | + | chr5_2:50724081-50724100 | Msa0774470:exon | 30.0% |
| ACAAAAGAGGAAGATGAAAT+AGG | - | chr5_2:50724157-50724176 | None:intergenic | 30.0% | |
| TGATATGTATGCAACAAAAG+AGG | - | chr5_2:50724170-50724189 | None:intergenic | 30.0% | |
| GGATACATGTATGTTAATGT+TGG | + | chr5_2:50724311-50724330 | Msa0774470:three_prime_UTR | 30.0% | |
| AAATGGGACATCTTAGTATT+TGG | - | chr5_2:50724342-50724361 | None:intergenic | 30.0% | |
| ATGTTGTGTTGTGGTTGAAT+CGG | + | chr5_2:50717957-50717976 | Msa0774470:five_prime_UTR | 35.0% | |
| GAATAATTGTCTTCTAGGCA+TGG | - | chr5_2:50718022-50718041 | None:intergenic | 35.0% | |
| !! | GAAACTTCTAGAACTTTCTC+GGG | - | chr5_2:50718184-50718203 | None:intergenic | 35.0% |
| CTAGAAGTTTCTAATTCGCT+TGG | + | chr5_2:50718193-50718212 | Msa0774470:CDS | 35.0% | |
| AATATGAAGTAGGGTGTGTT+TGG | + | chr5_2:50718917-50718936 | Msa0774470:intron | 35.0% | |
| !!! | TGTTTGCTGCTTTAGTTTTG+AGG | + | chr5_2:50719101-50719120 | Msa0774470:intron | 35.0% |
| !!! | GTTTGCTGCTTTAGTTTTGA+GGG | + | chr5_2:50719102-50719121 | Msa0774470:intron | 35.0% |
| !!! | TTTGCTGCTTTAGTTTTGAG+GGG | + | chr5_2:50719103-50719122 | Msa0774470:intron | 35.0% |
| ! | TTTTTGTGTGATTTTGTGGC+AGG | + | chr5_2:50719144-50719163 | Msa0774470:intron | 35.0% |
| ! | TTTTGTGTGATTTTGTGGCA+GGG | + | chr5_2:50719145-50719164 | Msa0774470:intron | 35.0% |
| !! | GGCTCAATTGATAATGTCAA+AGG | + | chr5_2:50719227-50719246 | Msa0774470:CDS | 35.0% |
| ! | TGTACTGATGCACTTGAAAA+TGG | + | chr5_2:50719251-50719270 | Msa0774470:CDS | 35.0% |
| TGCACTTGAAAATGGTGATA+AGG | + | chr5_2:50719259-50719278 | Msa0774470:CDS | 35.0% | |
| ! | ATTACAAAGCCTCGACTTTT+GGG | - | chr5_2:50719392-50719411 | None:intergenic | 35.0% |
| ! | AAAAGTCGAGGCTTTGTAAT+GGG | + | chr5_2:50719392-50719411 | Msa0774470:intron | 35.0% |
| CGACATTCAAATATTATGCG+TGG | - | chr5_2:50719626-50719645 | None:intergenic | 35.0% | |
| AAACAGAAGTCGAGAACAAT+TGG | - | chr5_2:50720000-50720019 | None:intergenic | 35.0% | |
| !! | AACACATTGTTTTGCTTCAC+TGG | + | chr5_2:50720104-50720123 | Msa0774470:intron | 35.0% |
| !! | TTCACTGGCCTTATATGTTA+TGG | + | chr5_2:50720119-50720138 | Msa0774470:intron | 35.0% |
| GGCTATGAAAATCAGAGAAA+TGG | - | chr5_2:50720292-50720311 | None:intergenic | 35.0% | |
| !! | AAATTTTAGGCTTGCTTCTG+TGG | + | chr5_2:50720506-50720525 | Msa0774470:intron | 35.0% |
| GATGAGAAGAAGATTGTGTA+AGG | - | chr5_2:50720764-50720783 | None:intergenic | 35.0% | |
| TGAAAGATGGCCATATGTAA+GGG | - | chr5_2:50720809-50720828 | None:intergenic | 35.0% | |
| ATGAAAGATGGCCATATGTA+AGG | - | chr5_2:50720810-50720829 | None:intergenic | 35.0% | |
| !! | ATTTTCTGGGAAATGACTCA+TGG | + | chr5_2:50721024-50721043 | Msa0774470:intron | 35.0% |
| GTACTTGAAAGCTTAAGTTC+CGG | - | chr5_2:50721053-50721072 | None:intergenic | 35.0% | |
| CATATATGTGAAGTTTGGGT+TGG | - | chr5_2:50721086-50721105 | None:intergenic | 35.0% | |
| !! | TTTTTCTAGGGGTTTTGTAG+AGG | + | chr5_2:50721108-50721127 | Msa0774470:intron | 35.0% |
| !!! | GGTTTGGTTTTGTATTTGAG+TGG | + | chr5_2:50721154-50721173 | Msa0774470:intron | 35.0% |
| ! | TTTTATCTTGGTCTCTGTCA+TGG | + | chr5_2:50721382-50721401 | Msa0774470:intron | 35.0% |
| TCTTCTTTACAGTTCATTGC+TGG | + | chr5_2:50721707-50721726 | Msa0774470:intron | 35.0% | |
| !!! | GGTTGTGGGAAATTTTTTGA+AGG | + | chr5_2:50721728-50721747 | Msa0774470:CDS | 35.0% |
| AGCAGATGAAAGTAGTTTAG+TGG | - | chr5_2:50721929-50721948 | None:intergenic | 35.0% | |
| ! | TGCTCATGCATGATTTTACT+TGG | + | chr5_2:50721945-50721964 | Msa0774470:intron | 35.0% |
| ATTAATGGAGATGTCAGGAT+TGG | + | chr5_2:50721984-50722003 | Msa0774470:intron | 35.0% | |
| GTTCTCATTCATTCAACAGT+TGG | + | chr5_2:50722032-50722051 | Msa0774470:intron | 35.0% | |
| CAAGATGCTAAAAGAATTCG+GGG | - | chr5_2:50722102-50722121 | None:intergenic | 35.0% | |
| CCAAGATGCTAAAAGAATTC+GGG | - | chr5_2:50722103-50722122 | None:intergenic | 35.0% | |
| CCCAAGATGCTAAAAGAATT+CGG | - | chr5_2:50722104-50722123 | None:intergenic | 35.0% | |
| ! | CCGAATTCTTTTAGCATCTT+GGG | + | chr5_2:50722101-50722120 | Msa0774470:intron | 35.0% |
| ACTTCTTGAGATATTAGTGG+TGG | + | chr5_2:50722145-50722164 | Msa0774470:intron | 35.0% | |
| CTTAACAACCAACAATTCCT+TGG | - | chr5_2:50722182-50722201 | None:intergenic | 35.0% | |
| TTCAGAACTCAATTTGTGAC+AGG | - | chr5_2:50722361-50722380 | None:intergenic | 35.0% | |
| AAAGATATTGAGGGTCCAAA+AGG | - | chr5_2:50722578-50722597 | None:intergenic | 35.0% | |
| GGCTGAAGAAAAGATATTGA+GGG | - | chr5_2:50722587-50722606 | None:intergenic | 35.0% | |
| AGGCTGAAGAAAAGATATTG+AGG | - | chr5_2:50722588-50722607 | None:intergenic | 35.0% | |
| !! | TTGGCATATCTCTAAGGTTT+AGG | - | chr5_2:50722666-50722685 | None:intergenic | 35.0% |
| ACACAATTGGCATATCTCTA+AGG | - | chr5_2:50722672-50722691 | None:intergenic | 35.0% | |
| TCCTGAAATGATCACACAAT+TGG | - | chr5_2:50722685-50722704 | None:intergenic | 35.0% | |
| TGTGATCATTTCAGGAAAGA+GGG | + | chr5_2:50722689-50722708 | Msa0774470:intron | 35.0% | |
| ! | AATACGACGAAACTTTTGTG+AGG | + | chr5_2:50722717-50722736 | Msa0774470:intron | 35.0% |
| ! | ATACGACGAAACTTTTGTGA+GGG | + | chr5_2:50722718-50722737 | Msa0774470:intron | 35.0% |
| !!! | CAATAACCAGCCTATTTTTG+GGG | + | chr5_2:50722749-50722768 | Msa0774470:intron | 35.0% |
| TGATTTCAGTCCCCAAAAAT+AGG | - | chr5_2:50722762-50722781 | None:intergenic | 35.0% | |
| GAAGCTCATTTGTGCAAAAT+TGG | + | chr5_2:50722939-50722958 | Msa0774470:intron | 35.0% | |
| TTCCCTCAAAGTTGCATTAT+TGG | - | chr5_2:50723012-50723031 | None:intergenic | 35.0% | |
| CAATTGAGCCAGACAATTTA+AGG | + | chr5_2:50723178-50723197 | Msa0774470:CDS | 35.0% | |
| GCCAGACAATTTAAGGATAT+TGG | + | chr5_2:50723185-50723204 | Msa0774470:CDS | 35.0% | |
| TGGAAAGCAATCCATTTATG+AGG | + | chr5_2:50723280-50723299 | Msa0774470:intron | 35.0% | |
| GGAAAGCAATCCATTTATGA+GGG | + | chr5_2:50723281-50723300 | Msa0774470:intron | 35.0% | |
| TCCTCTTCTAAGTGTATGTT+TGG | + | chr5_2:50723342-50723361 | Msa0774470:intron | 35.0% | |
| ACCAAACATACACTTAGAAG+AGG | - | chr5_2:50723346-50723365 | None:intergenic | 35.0% | |
| !!! | ATGTTTGGTTCTAGTTTTGG+AGG | + | chr5_2:50723357-50723376 | Msa0774470:intron | 35.0% |
| TTTAGACTGATGAAGTTAGC+TGG | + | chr5_2:50723890-50723909 | Msa0774470:intron | 35.0% | |
| GAAACACTTCACATTAAGCA+TGG | - | chr5_2:50724005-50724024 | None:intergenic | 35.0% | |
| AATTCACCAGTTCAAGCTTT+AGG | + | chr5_2:50724071-50724090 | Msa0774470:CDS | 35.0% | |
| AATTCTCCTAAAGCTTGAAC+TGG | - | chr5_2:50724080-50724099 | None:intergenic | 35.0% | |
| !! | AGCTTTAGGAGAATTAAGGA+AGG | + | chr5_2:50724085-50724104 | Msa0774470:exon | 35.0% |
| TGAAATAGGAGTGAATGAGA+AGG | - | chr5_2:50724143-50724162 | None:intergenic | 35.0% | |
| TGGATTGTAATTAGCACTGT+CGG | + | chr5_2:50724290-50724309 | Msa0774470:three_prime_UTR | 35.0% | |
| TAACATAACAATCGCTTCGG+TGG | - | chr5_2:50717938-50717957 | None:intergenic | 40.0% | |
| TGTTGTGTTGTGGTTGAATC+GGG | + | chr5_2:50717958-50717977 | Msa0774470:five_prime_UTR | 40.0% | |
| GGTAAGTAATGAACCAGTGA+TGG | - | chr5_2:50718249-50718268 | None:intergenic | 40.0% | |
| TGGTGGAAACGAGAAGATAA+AGG | + | chr5_2:50719175-50719194 | Msa0774470:CDS | 40.0% | |
| ! | AAGATAAAGGAATTGGTGCC+TGG | + | chr5_2:50719188-50719207 | Msa0774470:CDS | 40.0% |
| AATGGTGATAAGGTGCATCT+TGG | + | chr5_2:50719269-50719288 | Msa0774470:CDS | 40.0% | |
| ! | CATTACAAAGCCTCGACTTT+TGG | - | chr5_2:50719393-50719412 | None:intergenic | 40.0% |
| ! | CAAAAGTCGAGGCTTTGTAA+TGG | + | chr5_2:50719391-50719410 | Msa0774470:intron | 40.0% |
| TGTTCTCGACTTCTGTTTAG+AGG | + | chr5_2:50720002-50720021 | Msa0774470:intron | 40.0% | |
| !!! | GAGGTTTAGCCTTGCTTTTA+TGG | + | chr5_2:50720021-50720040 | Msa0774470:intron | 40.0% |
| GGTTAAAGGGTCTGGATAAA+AGG | - | chr5_2:50720252-50720271 | None:intergenic | 40.0% | |
| ! | GATTTTCATAGCCACACCAA+AGG | + | chr5_2:50720299-50720318 | Msa0774470:intron | 40.0% |
| AACTTATGTGACCTTTGGTG+TGG | - | chr5_2:50720313-50720332 | None:intergenic | 40.0% | |
| TATCTCCAGTAAAAACAGCC+GGG | - | chr5_2:50720364-50720383 | None:intergenic | 40.0% | |
| GTATCTCCAGTAAAAACAGC+CGG | - | chr5_2:50720365-50720384 | None:intergenic | 40.0% | |
| GCTTGCATAAGTAAAGCATG+TGG | + | chr5_2:50720672-50720691 | Msa0774470:intron | 40.0% | |
| TAAGTAAAGCATGTGGTGTG+TGG | + | chr5_2:50720679-50720698 | Msa0774470:intron | 40.0% | |
| TGTTCATCTGGACATGACTA+AGG | - | chr5_2:50720786-50720805 | None:intergenic | 40.0% | |
| !! | CATATGTAAGGGTGTTCATC+TGG | - | chr5_2:50720798-50720817 | None:intergenic | 40.0% |
| CAGATGAACACCCTTACATA+TGG | + | chr5_2:50720796-50720815 | Msa0774470:intron | 40.0% | |
| TGATTCCATGCTAAACAAGC+TGG | - | chr5_2:50720902-50720921 | None:intergenic | 40.0% | |
| TGTTTAGCATGGAATCACGT+TGG | + | chr5_2:50720905-50720924 | Msa0774470:intron | 40.0% | |
| AATCACGTTGGAACTGATGT+AGG | + | chr5_2:50720917-50720936 | Msa0774470:intron | 40.0% | |
| ! | CAGTGGCTTTTGTAGATTGA+AGG | + | chr5_2:50720977-50720996 | Msa0774470:intron | 40.0% |
| !! | AAGAAGTTGATGGTGTGGAT+TGG | + | chr5_2:50721217-50721236 | Msa0774470:intron | 40.0% |
| TCTATAGTTCTTGGTTGCTG+AGG | + | chr5_2:50721303-50721322 | Msa0774470:intron | 40.0% | |
| CTAATGTGCACAATCACACT+AGG | - | chr5_2:50721540-50721559 | None:intergenic | 40.0% | |
| ! | TTACAGTTCATTGCTGGTTG+TGG | + | chr5_2:50721713-50721732 | Msa0774470:intron | 40.0% |
| ! | TACAGTTCATTGCTGGTTGT+GGG | + | chr5_2:50721714-50721733 | Msa0774470:intron | 40.0% |
| ! | CCCGAATTCTTTTAGCATCT+TGG | + | chr5_2:50722100-50722119 | Msa0774470:intron | 40.0% |
| TGTACTACCCAAGGAATTGT+TGG | + | chr5_2:50722171-50722190 | Msa0774470:intron | 40.0% | |
| TGCGGTGTTTAGGTAAAAAC+TGG | + | chr5_2:50722238-50722257 | Msa0774470:intron | 40.0% | |
| GCGGTGTTTAGGTAAAAACT+GGG | + | chr5_2:50722239-50722258 | Msa0774470:intron | 40.0% | |
| GGTAAAAACTGGGAAATGTG+AGG | + | chr5_2:50722249-50722268 | Msa0774470:intron | 40.0% | |
| GACAGGAATTGAGTGTCAAT+CGG | - | chr5_2:50722344-50722363 | None:intergenic | 40.0% | |
| ATCCCTCTCAATCGTAAAAG+AGG | + | chr5_2:50722638-50722657 | Msa0774470:intron | 40.0% | |
| TCCCTCTCAATCGTAAAAGA+GGG | + | chr5_2:50722639-50722658 | Msa0774470:intron | 40.0% | |
| ! | TCCCTCTTTTACGATTGAGA+GGG | - | chr5_2:50722643-50722662 | None:intergenic | 40.0% |
| GCCAATTGTGTGATCATTTC+AGG | + | chr5_2:50722681-50722700 | Msa0774470:intron | 40.0% | |
| GTGTGATCATTTCAGGAAAG+AGG | + | chr5_2:50722688-50722707 | Msa0774470:intron | 40.0% | |
| ! | TAATGCAACTTTGAGGGAAG+AGG | + | chr5_2:50723013-50723032 | Msa0774470:intron | 40.0% |
| TCAATGGTTGAGGGAATTGT+TGG | - | chr5_2:50723252-50723271 | None:intergenic | 40.0% | |
| AACAATTCCCTCAACCATTG+AGG | + | chr5_2:50723251-50723270 | Msa0774470:CDS | 40.0% | |
| GGTAGATCAACCCTCATAAA+TGG | - | chr5_2:50723294-50723313 | None:intergenic | 40.0% | |
| ACTTAGAAGAGGAGTGGAAA+AGG | - | chr5_2:50723335-50723354 | None:intergenic | 40.0% | |
| ACATACACTTAGAAGAGGAG+TGG | - | chr5_2:50723341-50723360 | None:intergenic | 40.0% | |
| ! | ATAGATCCTTGTTGATGGGA+AGG | + | chr5_2:50723617-50723636 | Msa0774470:intron | 40.0% |
| TATCCTTTAGCAATCCCTTC+TGG | + | chr5_2:50723652-50723671 | Msa0774470:intron | 40.0% | |
| ATCCTTTAGCAATCCCTTCT+GGG | + | chr5_2:50723653-50723672 | Msa0774470:intron | 40.0% | |
| ! | TTTTCCAGTATACCCCAGAA+GGG | - | chr5_2:50723669-50723688 | None:intergenic | 40.0% |
| ! | ATTTTCCAGTATACCCCAGA+AGG | - | chr5_2:50723670-50723689 | None:intergenic | 40.0% |
| !! | TGGTTTGCGTAGCTAACTTT+TGG | + | chr5_2:50723859-50723878 | Msa0774470:intron | 40.0% |
| AAATGTACTGCAGGAGAAGA+TGG | + | chr5_2:50724043-50724062 | Msa0774470:intron | 40.0% | |
| AATGTACTGCAGGAGAAGAT+GGG | + | chr5_2:50724044-50724063 | Msa0774470:intron | 40.0% | |
| TAAGGAAGGTGAAAGACAAC+TGG | + | chr5_2:50724099-50724118 | Msa0774470:three_prime_UTR | 40.0% | |
| AAGGTGAAAGACAACTGGAA+GGG | + | chr5_2:50724104-50724123 | Msa0774470:three_prime_UTR | 40.0% | |
| ATAGGAGTGAATGAGAAGGT+TGG | - | chr5_2:50724139-50724158 | None:intergenic | 40.0% | |
| AATTAAAATGGCAGTGCCAG+AGG | + | chr5_2:50724249-50724268 | Msa0774470:three_prime_UTR | 40.0% | |
| ! | GGATGGATGATGGTACACTT+TGG | - | chr5_2:50717917-50717936 | None:intergenic | 45.0% |
| ATAACAATCGCTTCGGTGGA+TGG | - | chr5_2:50717934-50717953 | None:intergenic | 45.0% | |
| GTTGTGTTGTGGTTGAATCG+GGG | + | chr5_2:50717959-50717978 | Msa0774470:five_prime_UTR | 45.0% | |
| CTTCTAGGCATGGAATGTGA+TGG | - | chr5_2:50718012-50718031 | None:intergenic | 45.0% | |
| GAGTACTAAAGAAGCTGCTG+CGG | + | chr5_2:50718144-50718163 | Msa0774470:CDS | 45.0% | |
| GAACTTTCTCGGGTTCAACT+GGG | - | chr5_2:50718174-50718193 | None:intergenic | 45.0% | |
| AGAACTTTCTCGGGTTCAAC+TGG | - | chr5_2:50718175-50718194 | None:intergenic | 45.0% | |
| TCCTTACTACTCACCATCAC+TGG | + | chr5_2:50718233-50718252 | Msa0774470:CDS | 45.0% | |
| ! | ACCAGTGATGGTGAGTAGTA+AGG | - | chr5_2:50718237-50718256 | None:intergenic | 45.0% |
| ! | CAAGTTGAGTTGCCATACCA+AGG | - | chr5_2:50719326-50719345 | None:intergenic | 45.0% |
| ACAAGAGAGGTTAAAGGGTC+TGG | - | chr5_2:50720260-50720279 | None:intergenic | 45.0% | |
| TGTTACTGGCAAAGAGGATG+AGG | + | chr5_2:50720337-50720356 | Msa0774470:CDS | 45.0% | |
| TTGCTTCTGTGGTCCTTCAA+TGG | + | chr5_2:50720517-50720536 | Msa0774470:intron | 45.0% | |
| ! | GGAATCCAGCTTGTTTAGCA+TGG | + | chr5_2:50720894-50720913 | Msa0774470:intron | 45.0% |
| ! | TTCTGGGAAATGACTCATGG+TGG | + | chr5_2:50721027-50721046 | Msa0774470:intron | 45.0% |
| GAAGGGGAAGAAGAAGTTGA+TGG | + | chr5_2:50721207-50721226 | Msa0774470:intron | 45.0% | |
| !! | GGAAGAAGAAGTTGATGGTG+TGG | + | chr5_2:50721212-50721231 | Msa0774470:intron | 45.0% |
| TATCTTGGTCTCTGTCATGG+TGG | + | chr5_2:50721385-50721404 | Msa0774470:intron | 45.0% | |
| ATGTGCACAATCACACTAGG+TGG | - | chr5_2:50721537-50721556 | None:intergenic | 45.0% | |
| !! | CAGTAAACTCGAGTTGGCTT+TGG | - | chr5_2:50721803-50721822 | None:intergenic | 45.0% |
| AAGCCAACTCGAGTTTACTG+TGG | + | chr5_2:50721803-50721822 | Msa0774470:CDS | 45.0% | |
| GGGACTTGAGTATTACCTCA+TGG | - | chr5_2:50721829-50721848 | None:intergenic | 45.0% | |
| TTACCTAAACACCGCAAGCA+TGG | - | chr5_2:50722234-50722253 | None:intergenic | 45.0% | |
| AGATGACTACGCCATTCAAC+AGG | - | chr5_2:50722290-50722309 | None:intergenic | 45.0% | |
| TACTGTTTCCTTACCTGTGC+TGG | + | chr5_2:50722402-50722421 | Msa0774470:intron | 45.0% | |
| TAATAGACAACCTCCAGCAC+AGG | - | chr5_2:50722418-50722437 | None:intergenic | 45.0% | |
| ! | GTCCCTCTTTTACGATTGAG+AGG | - | chr5_2:50722644-50722663 | None:intergenic | 45.0% |
| TTCAGTCCCCAAAAATAGGC+TGG | - | chr5_2:50722758-50722777 | None:intergenic | 45.0% | |
| TGCAATAGGTAGGCACTCAT+TGG | + | chr5_2:50722901-50722920 | Msa0774470:intron | 45.0% | |
| TAACCTGGGCTCAAAATCAG+CGG | + | chr5_2:50723214-50723233 | Msa0774470:CDS | 45.0% | |
| TGGTTGAGGGAATTGTTGGT+TGG | - | chr5_2:50723248-50723267 | None:intergenic | 45.0% | |
| AACTCGTCCTCAATGGTTGA+GGG | - | chr5_2:50723261-50723280 | None:intergenic | 45.0% | |
| GGTTGATCTACCTGTAATCC+AGG | + | chr5_2:50723302-50723321 | Msa0774470:intron | 45.0% | |
| ACCTGTGTTTGGATCTGTAG+TGG | - | chr5_2:50723588-50723607 | None:intergenic | 45.0% | |
| TTTGCTCCTTCCCATCAACA+AGG | - | chr5_2:50723626-50723645 | None:intergenic | 45.0% | |
| TCCTTTAGCAATCCCTTCTG+GGG | + | chr5_2:50723654-50723673 | Msa0774470:intron | 45.0% | |
| ATGTACTGCAGGAGAAGATG+GGG | + | chr5_2:50724045-50724064 | Msa0774470:intron | 45.0% | |
| GAAGGTGAAAGACAACTGGA+AGG | + | chr5_2:50724103-50724122 | Msa0774470:three_prime_UTR | 45.0% | |
| !!! | ATAATTTTTTTACATTTTTA+CGG | - | chr5_2:50717818-50717837 | None:intergenic | 5.0% |
| !! | TATAAAATATAGTTATTTAT+CGG | + | chr5_2:50717886-50717905 | Msa0774470:five_prime_UTR | 5.0% |
| !!! | AAATAAAATTTTGTAATTTT+TGG | - | chr5_2:50723954-50723973 | None:intergenic | 5.0% |
| TACTAAAGAAGCTGCTGCGG+TGG | + | chr5_2:50718147-50718166 | Msa0774470:CDS | 50.0% | |
| ! | TTTTGTGGCAGGGATCATGC+TGG | + | chr5_2:50719155-50719174 | Msa0774470:intron | 50.0% |
| ! | GGAATTGGTGCCTGGAATCA+AGG | + | chr5_2:50719196-50719215 | Msa0774470:CDS | 50.0% |
| GTGCCTGGAATCAAGGTCTA+CGG | + | chr5_2:50719203-50719222 | Msa0774470:CDS | 50.0% | |
| ! | TTTTGGCCCTTCACACACCT+TGG | + | chr5_2:50719306-50719325 | Msa0774470:CDS | 50.0% |
| GCCATACCAAGGTGTGTGAA+GGG | - | chr5_2:50719315-50719334 | None:intergenic | 50.0% | |
| TGCCATACCAAGGTGTGTGA+AGG | - | chr5_2:50719316-50719335 | None:intergenic | 50.0% | |
| ! | AAAGCCTCGACTTTTGGGCA+GGG | - | chr5_2:50719387-50719406 | None:intergenic | 50.0% |
| ATGGTGGCAGACACTTGAAG+AGG | + | chr5_2:50719575-50719594 | Msa0774470:intron | 50.0% | |
| GGGCTAAGTGCTTGAAGTGA+AGG | + | chr5_2:50720478-50720497 | Msa0774470:intron | 50.0% | |
| AAATGCCCAAGGGCCATTGA+AGG | - | chr5_2:50720533-50720552 | None:intergenic | 50.0% | |
| TCGTCATCTGTCTGTTGTGC+TGG | + | chr5_2:50720844-50720863 | Msa0774470:intron | 50.0% | |
| CACGTTGGAACTGATGTAGG+CGG | + | chr5_2:50720920-50720939 | Msa0774470:intron | 50.0% | |
| ! | TCTGTCATGGTGGTGAACGA+CGG | + | chr5_2:50721395-50721414 | Msa0774470:intron | 50.0% |
| TGCAGAGAAGACTGCAGTAG+AGG | + | chr5_2:50721432-50721451 | Msa0774470:intron | 50.0% | |
| GCAGAGAAGACTGCAGTAGA+GGG | + | chr5_2:50721433-50721452 | Msa0774470:intron | 50.0% | |
| ACTGCAGTAGAGGGAAACCA+AGG | + | chr5_2:50721442-50721461 | Msa0774470:intron | 50.0% | |
| CAAGGAGGTGGAAGGGAAAT+GGG | + | chr5_2:50721460-50721479 | Msa0774470:intron | 50.0% | |
| AAGGAGGTGGAAGGGAAATG+GGG | + | chr5_2:50721461-50721480 | Msa0774470:intron | 50.0% | |
| TGGCCACAGTAAACTCGAGT+TGG | - | chr5_2:50721809-50721828 | None:intergenic | 50.0% | |
| TCGAGTTTACTGTGGCCATG+AGG | + | chr5_2:50721811-50721830 | Msa0774470:CDS | 50.0% | |
| AGTCCATGCTTGCGGTGTTT+AGG | + | chr5_2:50722228-50722247 | Msa0774470:intron | 50.0% | |
| TGTTTCCTTACCTGTGCTGG+AGG | + | chr5_2:50722405-50722424 | Msa0774470:intron | 50.0% | |
| GCTCAAAATCAGCGGCAAAC+TGG | + | chr5_2:50723222-50723241 | Msa0774470:CDS | 50.0% | |
| CAACTCGTCCTCAATGGTTG+AGG | - | chr5_2:50723262-50723281 | None:intergenic | 50.0% | |
| CTCAACCATTGAGGACGAGT+TGG | + | chr5_2:50723260-50723279 | Msa0774470:intron | 50.0% | |
| GCTTTCCAACTCGTCCTCAA+TGG | - | chr5_2:50723268-50723287 | None:intergenic | 50.0% | |
| AGGTGACGAACCTGGATTAC+AGG | - | chr5_2:50723315-50723334 | None:intergenic | 50.0% | |
| AGTGGAAAAGGTGACGAACC+TGG | - | chr5_2:50723323-50723342 | None:intergenic | 50.0% | |
| GCCACTACAGATCCAAACAC+AGG | + | chr5_2:50723584-50723603 | Msa0774470:intron | 50.0% | |
| ACCCCAGAAGGGATTGCTAA+AGG | - | chr5_2:50723658-50723677 | None:intergenic | 50.0% | |
| !! | CAATCCCTTCTGGGGTATAC+TGG | + | chr5_2:50723662-50723681 | Msa0774470:intron | 50.0% |
| ! | TGCCAGAGGCATGTCATGTT+AGG | + | chr5_2:50724263-50724282 | Msa0774470:three_prime_UTR | 50.0% |
| ! | GCCAGAGGCATGTCATGTTA+GGG | + | chr5_2:50724264-50724283 | Msa0774470:three_prime_UTR | 50.0% |
| TCCCTAACATGACATGCCTC+TGG | - | chr5_2:50724268-50724287 | None:intergenic | 50.0% | |
| GGCATGTCATGTTAGGGACA+TGG | + | chr5_2:50724270-50724289 | Msa0774470:three_prime_UTR | 50.0% | |
| TCGCTTCGGTGGATGGATGA+TGG | - | chr5_2:50717927-50717946 | None:intergenic | 55.0% | |
| CCACCGTAGACCTTGATTCC+AGG | - | chr5_2:50719209-50719228 | None:intergenic | 55.0% | |
| CCTGGAATCAAGGTCTACGG+TGG | + | chr5_2:50719206-50719225 | Msa0774470:CDS | 55.0% | |
| GCCCTTCACACACCTTGGTA+TGG | + | chr5_2:50719311-50719330 | Msa0774470:intron | 55.0% | |
| ! | CAAAGCCTCGACTTTTGGGC+AGG | - | chr5_2:50719388-50719407 | None:intergenic | 55.0% |
| TGGCAAAGAGGATGAGGACC+CGG | + | chr5_2:50720343-50720362 | Msa0774470:CDS | 55.0% | |
| !!! | GAGGACCCGGCTGTTTTTAC+TGG | + | chr5_2:50720356-50720375 | Msa0774470:CDS | 55.0% |
| TGTGGTCCTTCAATGGCCCT+TGG | + | chr5_2:50720524-50720543 | Msa0774470:intron | 55.0% | |
| GTGGTCCTTCAATGGCCCTT+GGG | + | chr5_2:50720525-50720544 | Msa0774470:intron | 55.0% | |
| GTTGGAACTGATGTAGGCGG+TGG | + | chr5_2:50720923-50720942 | Msa0774470:intron | 55.0% | |
| GGGAAATGACTCATGGTGGC+CGG | + | chr5_2:50721031-50721050 | Msa0774470:intron | 55.0% | |
| GGTGAACGACGGTACTGTTC+TGG | + | chr5_2:50721406-50721425 | Msa0774470:intron | 55.0% | |
| GAACGACGGTACTGTTCTGG+TGG | + | chr5_2:50721409-50721428 | Msa0774470:intron | 55.0% | |
| GCAGTAGAGGGAAACCAAGG+AGG | + | chr5_2:50721445-50721464 | Msa0774470:intron | 55.0% | |
| GTAGAGGGAAACCAAGGAGG+TGG | + | chr5_2:50721448-50721467 | Msa0774470:intron | 55.0% | |
| AGGGAAACCAAGGAGGTGGA+AGG | + | chr5_2:50721452-50721471 | Msa0774470:intron | 55.0% | |
| GGGAAACCAAGGAGGTGGAA+GGG | + | chr5_2:50721453-50721472 | Msa0774470:intron | 55.0% | |
| CCATTTCCCTTCCACCTCCT+TGG | - | chr5_2:50721462-50721481 | None:intergenic | 55.0% | |
| CCAAGGAGGTGGAAGGGAAA+TGG | + | chr5_2:50721459-50721478 | Msa0774470:intron | 55.0% | |
| TGGTGGCACTGTACTACCCA+AGG | + | chr5_2:50722162-50722181 | Msa0774470:intron | 55.0% | |
| CTTGGGTCAGTCCATGCTTG+CGG | + | chr5_2:50722220-50722239 | Msa0774470:intron | 55.0% | |
| GACAACCTCCAGCACAGGTA+AGG | - | chr5_2:50722413-50722432 | None:intergenic | 55.0% | |
| !!! | TTGCCGCTGATTTTGAGCCC+AGG | - | chr5_2:50723220-50723239 | None:intergenic | 55.0% |
| TGTGGCAGGGATCATGCTGG+TGG | + | chr5_2:50719158-50719177 | Msa0774470:intron | 60.0% | |
| ! | TCGACTTTTGGGCAGGGAGG+GGG | - | chr5_2:50719381-50719400 | None:intergenic | 60.0% |
| ! | CTCGACTTTTGGGCAGGGAG+GGG | - | chr5_2:50719382-50719401 | None:intergenic | 60.0% |
| ! | CCTCGACTTTTGGGCAGGGA+GGG | - | chr5_2:50719383-50719402 | None:intergenic | 60.0% |
| GGCAGGGAGGGGGAAGGAAA+GGG | - | chr5_2:50719371-50719390 | None:intergenic | 65.0% | |
| ! | CTTTTGGGCAGGGAGGGGGA+AGG | - | chr5_2:50719377-50719396 | None:intergenic | 65.0% |
| CCCTCCCTGCCCAAAAGTCG+AGG | + | chr5_2:50719380-50719399 | Msa0774470:intron | 65.0% | |
| ! | GCCTCGACTTTTGGGCAGGG+AGG | - | chr5_2:50719384-50719403 | None:intergenic | 65.0% |
| GGGCAGGGAGGGGGAAGGAA+AGG | - | chr5_2:50719372-50719391 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 50717783 | 50724409 | 50717783 | ID=Msa0774470;Name=Msa0774470 |
| chr5_2 | mRNA | 50717783 | 50724409 | 50717783 | ID=Msa0774470-mRNA-1;Parent=Msa0774470;Name=Msa0774470-mRNA-1;_AED=0.27;_eAED=0.27;_QI=218|0.83|0.85|1|0.83|0.85|7|317|230 |
| chr5_2 | exon | 50717783 | 50718047 | 50717783 | ID=Msa0774470-mRNA-1:exon:15095;Parent=Msa0774470-mRNA-1 |
| chr5_2 | exon | 50718132 | 50718254 | 50718132 | ID=Msa0774470-mRNA-1:exon:15096;Parent=Msa0774470-mRNA-1 |
| chr5_2 | exon | 50719166 | 50719327 | 50719166 | ID=Msa0774470-mRNA-1:exon:15097;Parent=Msa0774470-mRNA-1 |
| chr5_2 | exon | 50720310 | 50720388 | 50720310 | ID=Msa0774470-mRNA-1:exon:15098;Parent=Msa0774470-mRNA-1 |
| chr5_2 | exon | 50721719 | 50721832 | 50721719 | ID=Msa0774470-mRNA-1:exon:15099;Parent=Msa0774470-mRNA-1 |
| chr5_2 | exon | 50723147 | 50723277 | 50723147 | ID=Msa0774470-mRNA-1:exon:15100;Parent=Msa0774470-mRNA-1 |
| chr5_2 | exon | 50724056 | 50724409 | 50724056 | ID=Msa0774470-mRNA-1:exon:15101;Parent=Msa0774470-mRNA-1 |
| chr5_2 | five_prime_UTR | 50717783 | 50718000 | 50717783 | ID=Msa0774470-mRNA-1:five_prime_utr;Parent=Msa0774470-mRNA-1 |
| chr5_2 | CDS | 50718001 | 50718047 | 50718001 | ID=Msa0774470-mRNA-1:cds;Parent=Msa0774470-mRNA-1 |
| chr5_2 | CDS | 50718132 | 50718254 | 50718132 | ID=Msa0774470-mRNA-1:cds;Parent=Msa0774470-mRNA-1 |
| chr5_2 | CDS | 50719166 | 50719327 | 50719166 | ID=Msa0774470-mRNA-1:cds;Parent=Msa0774470-mRNA-1 |
| chr5_2 | CDS | 50720310 | 50720388 | 50720310 | ID=Msa0774470-mRNA-1:cds;Parent=Msa0774470-mRNA-1 |
| chr5_2 | CDS | 50721719 | 50721832 | 50721719 | ID=Msa0774470-mRNA-1:cds;Parent=Msa0774470-mRNA-1 |
| chr5_2 | CDS | 50723147 | 50723277 | 50723147 | ID=Msa0774470-mRNA-1:cds;Parent=Msa0774470-mRNA-1 |
| chr5_2 | CDS | 50724056 | 50724092 | 50724056 | ID=Msa0774470-mRNA-1:cds;Parent=Msa0774470-mRNA-1 |
| chr5_2 | three_prime_UTR | 50724093 | 50724409 | 50724093 | ID=Msa0774470-mRNA-1:three_prime_utr;Parent=Msa0774470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
