AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0740810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0740810 MtrunA17_Chr5g0441571 87.072 526 10 5 34 501 1 526 0.0 912
Msa0740810 MtrunA17_Chr5g0441651 73.714 525 75 6 40 501 10 534 0.0 763
Msa0740810 MtrunA17_Chr5g0441591 69.333 75 15 1 257 331 1 67 9.75e-26 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0740810 AT5G12200.1 67.115 520 112 6 39 501 5 522 0.0 707
Msa0740810 AT4G04955.1 23.160 462 261 16 42 434 16 452 4.47e-12 68.9

Find 251 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAACTCCACGAGCTTTC+TGG 0.115594 5_1:-60016416 None:intergenic
AGCTTGAACTTCTTTGAATT+TGG 0.140264 5_1:-60022291 None:intergenic
CATTGACACCATTTATAATT+TGG 0.142070 5_1:-60016446 None:intergenic
ATCCATGAAGTTTCAATTAA+AGG 0.153943 5_1:-60020827 None:intergenic
AACAATGAACAGCATTTAAT+TGG 0.170712 5_1:+60021390 Msa0740810:three_prime_UTR
AATAATTTATGTACTTTATT+AGG 0.170873 5_1:+60023238 Msa0740810:three_prime_UTR
TAGAGAGTATGCTTTGAAAA+AGG 0.184139 5_1:+60020987 Msa0740810:three_prime_UTR
AAGCAAAGTACCAAGATATT+TGG 0.184664 5_1:-60013607 None:intergenic
CGAGGGAGCACAATTCATTT+TGG 0.189374 5_1:-60022324 None:intergenic
AGAGCTACTTATGAGTATTT+TGG 0.196188 5_1:+60021546 Msa0740810:three_prime_UTR
GACTTCGTTATGCCAGTTAA+TGG 0.223543 5_1:+60014757 Msa0740810:CDS
TTAACTAATGTTTAAATTCA+TGG 0.239921 5_1:+60023122 Msa0740810:three_prime_UTR
CACCTTTAATTGAAACTTCA+TGG 0.242311 5_1:+60020825 Msa0740810:exon
CACGCCATAGGTGGTGTTTA+TGG 0.257699 5_1:+60021820 Msa0740810:three_prime_UTR
AAGAACTCTTGCATGGATTA+TGG 0.263061 5_1:+60014820 Msa0740810:CDS
TTCATGTAAGGAATGTGTTT+TGG 0.267954 5_1:+60021508 Msa0740810:three_prime_UTR
TAAATTGATGTAATGTTTCA+TGG 0.277147 5_1:-60022730 None:intergenic
CTTCAAAGTTGTGTTTAATC+AGG 0.287821 5_1:+60022427 Msa0740810:three_prime_UTR
TGCACTTCTTAAATCCTTGC+AGG 0.293429 5_1:-60015384 None:intergenic
AGCTTTCTGGGTGGAATTCC+AGG 0.304732 5_1:-60016403 None:intergenic
ACGAATACAGTGAATATAAA+AGG 0.308487 5_1:+60021874 Msa0740810:three_prime_UTR
GACTTCCGCCAAATTATAAA+TGG 0.313417 5_1:+60016438 Msa0740810:CDS
GACCAGCCCTACAAAGAAAA+TGG 0.313866 5_1:+60021230 Msa0740810:three_prime_UTR
TGTTCGTTGTTTGAGTTTAG+AGG 0.315013 5_1:+60022473 Msa0740810:three_prime_UTR
AAAAGGCATGTCATACTTAT+TGG 0.316105 5_1:-60021601 None:intergenic
ATCGGAGAACCTGTTGTCTC+TGG 0.316698 5_1:+60015899 Msa0740810:CDS
GTTATCTCAAAACTTGAGTT+AGG 0.317995 5_1:-60016997 None:intergenic
GCTGTTAAATTCCCATTAAC+TGG 0.321148 5_1:-60014769 None:intergenic
TTTCTTCTACGACATAGATT+TGG 0.322024 5_1:+60021476 Msa0740810:three_prime_UTR
AATAGATCGGAAAGTCTTAA+TGG 0.322660 5_1:-60021304 None:intergenic
TCATGTCCTTTACTCCTAAT+AGG 0.323254 5_1:-60016084 None:intergenic
GCGATGGTCCATGCAGAAAA+TGG 0.324860 5_1:+60015424 Msa0740810:CDS
CAAAACTTGAGTTAGGATTC+AGG 0.326312 5_1:-60016990 None:intergenic
GATAACTTATGTAGTAGTTT+AGG 0.328811 5_1:+60023282 Msa0740810:three_prime_UTR
ATGATAGAACTTGGAATAAC+AGG 0.335815 5_1:+60015475 Msa0740810:CDS
CTTGAAAGAGGATGCCCTTC+AGG 0.335903 5_1:-60015499 None:intergenic
AAGAAAGGATGCACGTGGTC+TGG 0.341974 5_1:+60016574 Msa0740810:CDS
ATTACATGAACCACATATAA+TGG 0.346729 5_1:-60015705 None:intergenic
ATCTCATGAGCCCTCCTATT+AGG 0.347834 5_1:+60016070 Msa0740810:CDS
TAGCAGGAGGAAGAGTTGTT+TGG 0.348224 5_1:+60017447 Msa0740810:CDS
GTTTGATGGATTGGACAAAA+AGG 0.350374 5_1:+60017538 Msa0740810:CDS
TGAATTCCAGCACCATTGTT+TGG 0.354475 5_1:-60022812 None:intergenic
GGCATACAAAGAATTTATTA+TGG 0.359781 5_1:+60015345 Msa0740810:CDS
TTCCAACTTAATACAAATCT+TGG 0.361351 5_1:-60021157 None:intergenic
CTGAAAGTTGTTCCTGGTAC+TGG 0.365720 5_1:+60017482 Msa0740810:CDS
TGTCAGTGGTGGTGGTTTGT+TGG 0.367389 5_1:+60023061 Msa0740810:three_prime_UTR
ACCTTTGATCAACAACTTGT+TGG 0.376233 5_1:-60013509 None:intergenic
CCATCAAACAGATAACTAAA+AGG 0.376449 5_1:-60017524 None:intergenic
ACTTCGTTATGCCAGTTAAT+GGG 0.380124 5_1:+60014758 Msa0740810:CDS
TGCCAAGATTTGTATTAAGT+TGG 0.381892 5_1:+60021155 Msa0740810:three_prime_UTR
ATTGCGAAGGCTCGGAAATC+AGG 0.383445 5_1:+60015750 Msa0740810:CDS
ATCAACTCCACGAGCTTTCT+GGG 0.386889 5_1:-60016415 None:intergenic
CGAAACAGATTCATCCCATT+TGG 0.390525 5_1:-60014860 None:intergenic
TTGAAACTTCATGGATAGTT+CGG 0.390728 5_1:+60020834 Msa0740810:exon
CATGGTCAATCAACATTACT+TGG 0.393282 5_1:+60021648 Msa0740810:three_prime_UTR
TAGTTATCTGTTTGATGGAT+TGG 0.395124 5_1:+60017529 Msa0740810:CDS
TTATGCTTCAACATAATGAT+TGG 0.395255 5_1:+60021982 Msa0740810:three_prime_UTR
TGGAATTCACAGTCCATTGC+GGG 0.395864 5_1:+60022826 Msa0740810:three_prime_UTR
TCATGGCTTCATTGTATGCT+TGG 0.396866 5_1:+60021723 Msa0740810:three_prime_UTR
GGAAACATATGTACTAGTTC+AGG 0.398205 5_1:+60023194 Msa0740810:three_prime_UTR
TATGATACACACACAACAAC+TGG 0.402034 5_1:+60021924 Msa0740810:three_prime_UTR
TACAGTACATACACAACTTC+GGG 0.402054 5_1:-60013221 None:intergenic
AGCAGGAGGAAGAGTTGTTT+GGG 0.402796 5_1:+60017448 Msa0740810:CDS
GCACGTGGTCTGGGACATAA+TGG 0.402982 5_1:+60016584 Msa0740810:CDS
AGCATGCATGCTTTCTTTGA+TGG 0.408186 5_1:+60022098 Msa0740810:three_prime_UTR
CACCACCTATGGCGTGTTGT+AGG 0.409794 5_1:-60021813 None:intergenic
CTTCAATCTGCCCTTGCAAC+AGG 0.410426 5_1:+60016114 Msa0740810:CDS
GCATGTTGGAAGCCTGCAAC+GGG 0.415038 5_1:+60020925 Msa0740810:three_prime_UTR
ACCTGGCATGACAAACTTGC+TGG 0.415676 5_1:-60014504 None:intergenic
CTTTGCTACTTATCATGTGT+TGG 0.420954 5_1:+60022367 Msa0740810:three_prime_UTR
CTGAAGGGCATCCTCTTTCA+AGG 0.423952 5_1:+60015500 Msa0740810:CDS
TGCTACTTATCATGTGTTGG+AGG 0.424099 5_1:+60022370 Msa0740810:three_prime_UTR
TGTATGAAGAGCGTCATAGA+TGG 0.424359 5_1:+60022015 Msa0740810:three_prime_UTR
TGAATCTGTTTCGACAGATA+TGG 0.425079 5_1:+60014870 Msa0740810:CDS
CTTGTTAAAACATACTTCTC+TGG 0.429704 5_1:-60022551 None:intergenic
CTTGGATGTGGGCTGCTCTC+AGG 0.430764 5_1:+60021666 Msa0740810:three_prime_UTR
AATGTGTAGGAGTGCAATAT+TGG 0.431270 5_1:+60022984 Msa0740810:intron
ACTTCAGGACAAAGGGTAAT+CGG 0.431869 5_1:+60015881 Msa0740810:intron
TGCCGTCCAACCAAATATCT+TGG 0.440604 5_1:+60013597 Msa0740810:CDS
TGTGAAGCTGGAATTGAATC+CGG 0.440694 5_1:+60013460 Msa0740810:CDS
CAGCATTTAATTGGAAAAGA+AGG 0.443510 5_1:+60021399 Msa0740810:three_prime_UTR
ATTGAGAATAGTTTATGTAC+TGG 0.443636 5_1:+60023320 Msa0740810:three_prime_UTR
CTGTCTGTCATTACTTCGCT+TGG 0.445713 5_1:-60022875 None:intergenic
AGGAAGGGAGCTATACTTCC+GGG 0.446434 5_1:+60016946 Msa0740810:intron
GTAAACATTTGTGTCCAATC+TGG 0.448537 5_1:-60017037 None:intergenic
GTGATAAGAAAGAAGAAAAG+AGG 0.448782 5_1:-60013280 None:intergenic
TCCATGTGGCAGTTACCAAA+TGG 0.449603 5_1:+60014845 Msa0740810:CDS
AACATTCACAGCTGAAATCA+TGG 0.450961 5_1:-60022454 None:intergenic
AATGAACTGAAAGTTGTTCC+TGG 0.453083 5_1:+60017476 Msa0740810:CDS
AGATATGGAGATCATGGTTA+AGG 0.453365 5_1:+60014885 Msa0740810:CDS
TTGGAGGAGGTTGTAGTTGG+AGG 0.455878 5_1:+60022386 Msa0740810:three_prime_UTR
AGAAAGGATGCACGTGGTCT+GGG 0.459944 5_1:+60016575 Msa0740810:CDS
GTCTCTTGGTGCCTTGGCGA+TGG 0.460002 5_1:+60015408 Msa0740810:CDS
ACCAGCAAGTTTGTCATGCC+AGG 0.462029 5_1:+60014503 Msa0740810:CDS
ACATCAATTTAAGTGTAGTA+AGG 0.462673 5_1:+60022742 Msa0740810:three_prime_UTR
GTGCAAGTCTCTTGGTGCCT+TGG 0.464259 5_1:+60015402 Msa0740810:CDS
CTGTTGCAAGGGCAGATTGA+AGG 0.466439 5_1:-60016113 None:intergenic
ATTGAGGTTGTCAGTGGTGG+TGG 0.468328 5_1:+60023053 Msa0740810:three_prime_UTR
AATAGTTTATGTACTGGTTG+AGG 0.469055 5_1:+60023326 Msa0740810:three_prime_UTR
CAACAGAAAATGATAGAACT+TGG 0.469362 5_1:+60015466 Msa0740810:CDS
TGTATTAAGTTGGAAAAGGA+TGG 0.471002 5_1:+60021165 Msa0740810:three_prime_UTR
AATGGAGATGCAGTGTATGC+AGG 0.472410 5_1:+60015442 Msa0740810:CDS
GAAAGAAGAAAAGAGGAAGA+AGG 0.480062 5_1:-60013273 None:intergenic
TTTAAGAAGTGCAAGTCTCT+TGG 0.486139 5_1:+60015394 Msa0740810:CDS
CAAATTATAAATGGTGTCAA+TGG 0.487704 5_1:+60016447 Msa0740810:CDS
TTCGACAGATATGGAGATCA+TGG 0.489226 5_1:+60014879 Msa0740810:CDS
CAATCAACATTACTTGGATG+TGG 0.489796 5_1:+60021654 Msa0740810:three_prime_UTR
GCATGCATGCTTTCTTTGAT+GGG 0.490315 5_1:+60022099 Msa0740810:three_prime_UTR
AGTTGGAAAAGGATGGTTTG+TGG 0.490374 5_1:+60021172 Msa0740810:three_prime_UTR
GTGTTGGAGGAGGTTGTAGT+TGG 0.490830 5_1:+60022383 Msa0740810:three_prime_UTR
ACCATTGGAGGCCTTGAAAG+AGG 0.491446 5_1:-60015511 None:intergenic
GATTTGTATTAAGTTGGAAA+AGG 0.491914 5_1:+60021161 Msa0740810:three_prime_UTR
AGCCCTCCTATTAGGAGTAA+AGG 0.493058 5_1:+60016078 Msa0740810:CDS
CAACATAATGATTGGTTGAG+TGG 0.494843 5_1:+60021990 Msa0740810:three_prime_UTR
TCAAATCCAAACAATGGTGC+TGG 0.496584 5_1:+60022806 Msa0740810:three_prime_UTR
GGTCAGTCTGCAGCATTAGC+TGG 0.496840 5_1:+60014715 Msa0740810:CDS
AAAATTGAAGTGACTATAGC+AGG 0.499216 5_1:+60017431 Msa0740810:CDS
ACACCTACAAATGTAGCAAA+AGG 0.501306 5_1:-60021618 None:intergenic
AATTGAAGCCACAGATGGAC+AGG 0.502360 5_1:+60022633 Msa0740810:three_prime_UTR
TGTGAACACTCCATTATATG+TGG 0.503252 5_1:+60015695 Msa0740810:CDS
AATCTGTAGGTATTGAAGAA+AGG 0.505211 5_1:+60016559 Msa0740810:intron
TAGGAGTAAAGGACATGATA+AGG 0.505311 5_1:+60016089 Msa0740810:CDS
AAGGAAGGGAGCTATACTTC+CGG 0.506496 5_1:+60016945 Msa0740810:intron
AACTTAATACAAATCTTGGC+AGG 0.506782 5_1:-60021153 None:intergenic
ATCTGTGTGTTCACGAGAGA+GGG 0.507673 5_1:+60022517 Msa0740810:three_prime_UTR
CCATGTGGCAGTTACCAAAT+GGG 0.509038 5_1:+60014846 Msa0740810:CDS
ACCACCTATGGCGTGTTGTA+GGG 0.509756 5_1:-60021812 None:intergenic
ATTCTTGTTTGCACAAGAGA+GGG 0.511572 5_1:+60021069 Msa0740810:three_prime_UTR
ACACCTAGGGATGGATGCGT+TGG 0.515631 5_1:+60014663 Msa0740810:CDS
GTTAATGGGAATTTAACAGC+TGG 0.516206 5_1:+60014772 Msa0740810:CDS
AGGGCTAACCCAGAGACAAC+AGG 0.520985 5_1:-60015908 None:intergenic
AGAATCTGAAGATGCAACTA+AGG 0.521210 5_1:+60022703 Msa0740810:three_prime_UTR
CGGGTTAAATGTGAAGATCA+AGG 0.521428 5_1:+60022845 Msa0740810:three_prime_UTR
TATGCCATAAACACCACCTA+TGG 0.521771 5_1:-60021824 None:intergenic
TACTTATCATGTGTTGGAGG+AGG 0.523219 5_1:+60022373 Msa0740810:three_prime_UTR
ATCGAAATCAATGATGATGC+AGG 0.524055 5_1:+60021273 Msa0740810:three_prime_UTR
AACATAATGATTGGTTGAGT+GGG 0.524704 5_1:+60021991 Msa0740810:three_prime_UTR
ATAATATCTGCGTCGGACCC+CGG 0.524734 5_1:-60016964 None:intergenic
GCAAACAAGAATTGCATAGC+AGG 0.525492 5_1:-60021058 None:intergenic
AAAATCTCACCACTCCAGAT+TGG 0.525580 5_1:+60017023 Msa0740810:CDS
TGGAAGAAATTGCGAAGGCT+CGG 0.526055 5_1:+60015742 Msa0740810:CDS
TACCAAGATATTTGGTTGGA+CGG 0.526123 5_1:-60013599 None:intergenic
TAGGAACTGATCACTGTGCC+TGG 0.528550 5_1:+60016385 Msa0740810:CDS
TGCACAAGAGAGGGGTCTCA+AGG 0.531486 5_1:+60021078 Msa0740810:three_prime_UTR
TGACACCATTTATAATTTGG+CGG 0.532555 5_1:-60016443 None:intergenic
AAGCATAAACTTGTCGATGA+AGG 0.533024 5_1:-60021967 None:intergenic
TCTTCACATTTAACCCGCAA+TGG 0.533346 5_1:-60022839 None:intergenic
TGTTGCAAGGGCAGATTGAA+GGG 0.533933 5_1:-60016112 None:intergenic
TGAAAGTTGTTCCTGGTACT+GGG 0.535109 5_1:+60017483 Msa0740810:CDS
TAGTATTCATGATGAAGGTA+TGG 0.538379 5_1:+60020876 Msa0740810:three_prime_UTR
CTACAGTACATACACAACTT+CGG 0.538906 5_1:-60013222 None:intergenic
ATGGAGATGCAGTGTATGCA+GGG 0.539847 5_1:+60015443 Msa0740810:CDS
TTCACAACATGCTGACAACC+AGG 0.541892 5_1:+60013312 Msa0740810:CDS
CCTGCAAAACTCCTGTTGCA+AGG 0.542489 5_1:-60016125 None:intergenic
TGTCCTTTACTCCTAATAGG+AGG 0.543615 5_1:-60016081 None:intergenic
CCCTCGTTGAATGTTGTCGA+GGG 0.543640 5_1:+60022341 Msa0740810:three_prime_UTR
TTTGTAGGTGTGAACCATCA+TGG 0.544496 5_1:+60021630 Msa0740810:three_prime_UTR
TGTGATAGTATTCATGATGA+AGG 0.546656 5_1:+60020871 Msa0740810:three_prime_UTR
TCCAACAAGTTGTTGATCAA+AGG 0.548151 5_1:+60013508 Msa0740810:CDS
ACCTATGTAGTTGGAAGGAG+AGG 0.548439 5_1:+60015641 Msa0740810:intron
CACCTAGGGATGGATGCGTT+GGG 0.551140 5_1:+60014664 Msa0740810:CDS
GAGATCATGGTTAAGGAGAA+AGG 0.551712 5_1:+60014892 Msa0740810:CDS
CTGCAAAACTCCTGTTGCAA+GGG 0.554827 5_1:-60016124 None:intergenic
AACGATGAGCTTCTCCTGCA+AGG 0.555475 5_1:+60015370 Msa0740810:CDS
CAATTTAAGTGTAGTAAGGA+TGG 0.555667 5_1:+60022746 Msa0740810:three_prime_UTR
TGTATGTATCTCCCAGTACC+AGG 0.556170 5_1:-60017494 None:intergenic
TCGGAGAACCTGTTGTCTCT+GGG 0.557253 5_1:+60015900 Msa0740810:CDS
TGTTGCACATCTAGACTCTC+CGG 0.559348 5_1:-60013479 None:intergenic
AGGATCAAGTCTGCGATGGA+AGG 0.560217 5_1:+60021894 Msa0740810:three_prime_UTR
TTAATTGGAAAAGAAGGTGA+TGG 0.560896 5_1:+60021405 Msa0740810:three_prime_UTR
CATATACATCAGCAACATGT+TGG 0.561245 5_1:-60013555 None:intergenic
CTTGGAATAACAGGTCCTGA+AGG 0.561467 5_1:+60015484 Msa0740810:CDS
CCGCATTGTTGACAATAGAT+CGG 0.561490 5_1:-60021317 None:intergenic
TCCTCTTTCAAGGCCTCCAA+TGG 0.565628 5_1:+60015510 Msa0740810:CDS
TATCTGTGTGTTCACGAGAG+AGG 0.565938 5_1:+60022516 Msa0740810:three_prime_UTR
TTGATCCTCACGCACACCTA+GGG 0.566143 5_1:+60014650 Msa0740810:CDS
TAAAAGGATCAAGTCTGCGA+TGG 0.569182 5_1:+60021890 Msa0740810:three_prime_UTR
TTGTCAAACCTGTCCATCTG+TGG 0.569297 5_1:-60022641 None:intergenic
GAAGGCAAAGAACTCTTGCA+TGG 0.570685 5_1:+60014813 Msa0740810:CDS
CCCATTTGGTAACTGCCACA+TGG 0.570686 5_1:-60014846 None:intergenic
AAAGTACCAAGATATTTGGT+TGG 0.571738 5_1:-60013603 None:intergenic
TGGTCTGTCACAATACCCAC+AGG 0.573899 5_1:-60021753 None:intergenic
TCCCTCGTTGAATGTTGTCG+AGG 0.574922 5_1:+60022340 Msa0740810:three_prime_UTR
GTATGAAGAGCGTCATAGAT+GGG 0.575034 5_1:+60022016 Msa0740810:three_prime_UTR
CTGGAATTCACAGTCCATTG+CGG 0.575404 5_1:+60022825 Msa0740810:three_prime_UTR
TGGCATGAGTGTACTCACCT+TGG 0.576261 5_1:-60022271 None:intergenic
GCTTCATTGTATGCTTGGAA+AGG 0.576658 5_1:+60021728 Msa0740810:three_prime_UTR
AATTCTTGTTTGCACAAGAG+AGG 0.579543 5_1:+60021068 Msa0740810:three_prime_UTR
CAAGCGAAGTAATGACAGAC+AGG 0.581967 5_1:+60022876 Msa0740810:three_prime_UTR
TGTAATGAGCATTGATGCAA+TGG 0.582110 5_1:+60015722 Msa0740810:CDS
CTATGTAGAATCATCTATTG+AGG 0.583723 5_1:+60023037 Msa0740810:three_prime_UTR
TTCTGCATGGACCATCGCCA+AGG 0.585160 5_1:-60015419 None:intergenic
TCTATTGTCAACAATGCGGA+AGG 0.586150 5_1:+60021321 Msa0740810:three_prime_UTR
AGCATGTTGGAAGCCTGCAA+CGG 0.586912 5_1:+60020924 Msa0740810:three_prime_UTR
ATTGATCCTCACGCACACCT+AGG 0.587051 5_1:+60014649 Msa0740810:CDS
TCCATTGAAAAGCAATTCCA+AGG 0.588119 5_1:+60022254 Msa0740810:three_prime_UTR
AGTTGCATCTTCAGATTCTG+CGG 0.590083 5_1:-60022699 None:intergenic
GTCCTTTACTCCTAATAGGA+GGG 0.591232 5_1:-60016080 None:intergenic
TATTGTGACAGACCAATGTA+AGG 0.594260 5_1:+60021761 Msa0740810:three_prime_UTR
TCTATTGAGGTTGTCAGTGG+TGG 0.597149 5_1:+60023050 Msa0740810:three_prime_UTR
TTTACAACTTCACAGCTGGT+AGG 0.600261 5_1:+60016366 Msa0740810:intron
CTGATGATGATGAAGCATGT+TGG 0.601790 5_1:+60020911 Msa0740810:three_prime_UTR
TGGATACCTATGTAGTTGGA+AGG 0.601928 5_1:+60015636 Msa0740810:intron
TACCCAACGCATCCATCCCT+AGG 0.602653 5_1:-60014666 None:intergenic
TGGAAAAGAAGGTGATGGCA+AGG 0.603127 5_1:+60021410 Msa0740810:three_prime_UTR
GATAACATATGTACTAGTTG+AGG 0.605719 5_1:+60023260 Msa0740810:three_prime_UTR
AATCAACATTACTTGGATGT+GGG 0.607108 5_1:+60021655 Msa0740810:three_prime_UTR
CAGTCTGCAGCATTAGCTGG+TGG 0.607523 5_1:+60014718 Msa0740810:CDS
CAGGATGATAATATCTGCGT+CGG 0.607545 5_1:-60016971 None:intergenic
GCTGATGTATATGTTGAAGA+TGG 0.607886 5_1:+60013565 Msa0740810:CDS
TGTAGGGAAGACTAACTCAA+TGG 0.612233 5_1:-60021796 None:intergenic
TCCTCACGCACACCTAGGGA+TGG 0.612455 5_1:+60014654 Msa0740810:CDS
TCTTCCCTACAACACGCCAT+AGG 0.617216 5_1:+60021808 Msa0740810:three_prime_UTR
GATGACTCAAATCCAAACAA+TGG 0.622244 5_1:+60022800 Msa0740810:three_prime_UTR
AACAAGTTGTTGATCAAAGG+TGG 0.623994 5_1:+60013511 Msa0740810:CDS
TTCTTGTTTGCACAAGAGAG+GGG 0.624091 5_1:+60021070 Msa0740810:three_prime_UTR
GCACAAGAGAGGGGTCTCAA+GGG 0.625092 5_1:+60021079 Msa0740810:three_prime_UTR
TGTGTTGTGTTACAGATCTG+AGG 0.625147 5_1:+60023173 Msa0740810:three_prime_UTR
TCCCTACAACACGCCATAGG+TGG 0.629132 5_1:+60021811 Msa0740810:three_prime_UTR
TCAGTAGACGACTTCTTCAG+TGG 0.630433 5_1:+60014694 Msa0740810:CDS
GAGAGAATTGAAGCCACAGA+TGG 0.631735 5_1:+60022628 Msa0740810:three_prime_UTR
AATTCCACCCAGAAAGCTCG+TGG 0.632386 5_1:+60016408 Msa0740810:CDS
TTGGAATAACAGGTCCTGAA+GGG 0.633953 5_1:+60015485 Msa0740810:CDS
TCCATCCCTAGGTGTGCGTG+AGG 0.635276 5_1:-60014655 None:intergenic
TCAATGATGATGCAGGAGTG+AGG 0.638777 5_1:+60021280 Msa0740810:three_prime_UTR
TCTCAACCACACTGATAGCG+TGG 0.640617 5_1:+60013168 Msa0740810:CDS
TCATCTATTGAGGTTGTCAG+TGG 0.640747 5_1:+60023047 Msa0740810:three_prime_UTR
TCAAACAGATAACTAAAAGG+AGG 0.641986 5_1:-60017521 None:intergenic
TGCAATGGAAGAAATTGCGA+AGG 0.643503 5_1:+60015737 Msa0740810:CDS
CCCTCGACAACATTCAACGA+GGG 0.645738 5_1:-60022341 None:intergenic
AACTCCACGAGCTTTCTGGG+TGG 0.646127 5_1:-60016412 None:intergenic
ATGCTTGGAAAGGCCCCTGT+GGG 0.652810 5_1:+60021738 Msa0740810:three_prime_UTR
TTGATTCCACGCTATCAGTG+TGG 0.660248 5_1:-60013174 None:intergenic
CAGATAACACATGACAACAC+AGG 0.666939 5_1:-60022499 None:intergenic
CTATTGTCAACAATGCGGAA+GGG 0.669349 5_1:+60021322 Msa0740810:three_prime_UTR
TGGCATGACAAACTTGCTGG+TGG 0.670376 5_1:-60014501 None:intergenic
ATTGAAGTGACTATAGCAGG+AGG 0.670996 5_1:+60017434 Msa0740810:CDS
GTAGGAGTGCAATATTGGAA+TGG 0.673951 5_1:+60022989 Msa0740810:intron
GTAATGTTGATTGACCATGA+TGG 0.679530 5_1:-60021644 None:intergenic
TATGCTTGGAAAGGCCCCTG+TGG 0.685747 5_1:+60021737 Msa0740810:three_prime_UTR
GGAAGGGAGCTATACTTCCG+GGG 0.686159 5_1:+60016947 Msa0740810:intron
CATGGATTATGGCTTCCATG+TGG 0.692362 5_1:+60014831 Msa0740810:CDS
AAGACACAGAGTCATTTGTG+TGG 0.693141 5_1:+60021691 Msa0740810:three_prime_UTR
CCGATCTATTGTCAACAATG+CGG 0.696000 5_1:+60021317 Msa0740810:three_prime_UTR
GGTCTGTCACAATACCCACA+GGG 0.702160 5_1:-60021752 None:intergenic
CATTTGTGTCCAATCTGGAG+TGG 0.704775 5_1:-60017032 None:intergenic
CGTGGTCTGGGACATAATGG+TGG 0.712059 5_1:+60016587 Msa0740810:CDS
TATTGAAGAAAGGATGCACG+TGG 0.746446 5_1:+60016569 Msa0740810:CDS
CATGTTGGAAGCCTGCAACG+GGG 0.757747 5_1:+60020926 Msa0740810:three_prime_UTR
ACCCTCGACAACATTCAACG+AGG 0.768012 5_1:-60022342 None:intergenic
GTCTGTCACAATACCCACAG+GGG 0.784984 5_1:-60021751 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTGAATTTATCTATTTA+TGG + chr5_1:60013733-60013752 Msa0740810:intron 10.0%
!! AATAAAAAATTACTAAAAAC+TGG - chr5_1:60014262-60014281 None:intergenic 10.0%
!!! TAAAACATCATTAATATTTT+TGG - chr5_1:60016882-60016901 None:intergenic 10.0%
!! ATATAAAGAGAAAATAATAT+TGG - chr5_1:60018931-60018950 None:intergenic 10.0%
!!! TTTTAATAATTACATTTTTG+GGG - chr5_1:60019746-60019765 None:intergenic 10.0%
!! AAATGTAATTATTAAAATTG+GGG + chr5_1:60019749-60019768 Msa0740810:intron 10.0%
!!! TTTTTTTTTTTTGTGTTTTA+AGG + chr5_1:60020046-60020065 Msa0740810:intron 10.0%
!!! TAGTTAACATAATTTTATAA+TGG - chr5_1:60023109-60023128 None:intergenic 10.0%
!! AATAATTTATGTACTTTATT+AGG + chr5_1:60023238-60023257 Msa0740810:three_prime_UTR 10.0%
!!! TATTTTATGAATACAACTTA+TGG + chr5_1:60013806-60013825 Msa0740810:intron 15.0%
!! AGTTAGATTAAAAATCTTTA+AGG - chr5_1:60014534-60014553 None:intergenic 15.0%
!! AATATTGAATTAGTGTATAT+AGG - chr5_1:60014557-60014576 None:intergenic 15.0%
!!! ATTTTAGATAGTTCAATATT+GGG + chr5_1:60014994-60015013 Msa0740810:intron 15.0%
!!! TTTAATAATGTAATTTGTGT+CGG + chr5_1:60016031-60016050 Msa0740810:intron 15.0%
!!! ATTTTGTTATTCTTATTGTT+TGG + chr5_1:60016848-60016867 Msa0740810:intron 15.0%
!!! TCATTTTCTTAAATTATCAT+CGG - chr5_1:60017171-60017190 None:intergenic 15.0%
!! TTTAAGAAAATGATAGTAAT+TGG + chr5_1:60017178-60017197 Msa0740810:intron 15.0%
!!! TACTTTTTCTAATTATTTTC+AGG + chr5_1:60017406-60017425 Msa0740810:intron 15.0%
!!! ACTTTTTCTAATTATTTTCA+GGG + chr5_1:60017407-60017426 Msa0740810:intron 15.0%
!! ATTATATAGAACACTTATAT+TGG + chr5_1:60017804-60017823 Msa0740810:intron 15.0%
!! AATTGGTTAGATTAATTATA+GGG - chr5_1:60018675-60018694 None:intergenic 15.0%
!! AAATTGGTTAGATTAATTAT+AGG - chr5_1:60018676-60018695 None:intergenic 15.0%
!! TATAATTAATCTAACCAATT+TGG + chr5_1:60018675-60018694 Msa0740810:intron 15.0%
!!! AGATTAGTCTTTAAATTATA+GGG - chr5_1:60018762-60018781 None:intergenic 15.0%
!!! AAGATTTTTTTTGACAAAAA+TGG + chr5_1:60018827-60018846 Msa0740810:intron 15.0%
!! AAAAATAAACATTGAGTTTA+GGG - chr5_1:60019018-60019037 None:intergenic 15.0%
!! AAAAAATAAACATTGAGTTT+AGG - chr5_1:60019019-60019038 None:intergenic 15.0%
!! CAAATATAATAGTATTGTAT+AGG - chr5_1:60019063-60019082 None:intergenic 15.0%
!! AATGTAATTATTAAAATTGG+GGG + chr5_1:60019750-60019769 Msa0740810:intron 15.0%
!! AAAAGAAAGAATATAAAACA+TGG + chr5_1:60019827-60019846 Msa0740810:intron 15.0%
!! AAATTAGAAAATTGGAAAAT+GGG - chr5_1:60020134-60020153 None:intergenic 15.0%
!! AAAATTAGAAAATTGGAAAA+TGG - chr5_1:60020135-60020154 None:intergenic 15.0%
!! CAAGTATAAAATTAGAAAAT+TGG - chr5_1:60020142-60020161 None:intergenic 15.0%
!!! CTTTGTAAGAAAATATTTTT+GGG + chr5_1:60022046-60022065 Msa0740810:three_prime_UTR 15.0%
!! ATTCAATATACATACATATA+TGG - chr5_1:60022944-60022963 None:intergenic 15.0%
!! TTAACTAATGTTTAAATTCA+TGG + chr5_1:60023122-60023141 Msa0740810:three_prime_UTR 15.0%
!! AAAAATATGACATCCAATTT+AGG + chr5_1:60013694-60013713 Msa0740810:intron 20.0%
!! TAAAATATCCTAGAGTTATT+GGG - chr5_1:60013793-60013812 None:intergenic 20.0%
!! ATAAAATATCCTAGAGTTAT+TGG - chr5_1:60013794-60013813 None:intergenic 20.0%
!! TCATAATTTAGTAATTCTCA+GGG - chr5_1:60013950-60013969 None:intergenic 20.0%
!!! TTGGGTTTTAAAATTGTTTT+TGG + chr5_1:60013998-60014017 Msa0740810:intron 20.0%
!!! TGGGTTTTAAAATTGTTTTT+GGG + chr5_1:60013999-60014018 Msa0740810:intron 20.0%
!!! AATTTTGATGAACTATTCTA+TGG + chr5_1:60014172-60014191 Msa0740810:intron 20.0%
!! GAAAGTAACAAAATTTAATG+TGG - chr5_1:60014398-60014417 None:intergenic 20.0%
!!! GATTTTAGATAGTTCAATAT+TGG + chr5_1:60014993-60015012 Msa0740810:intron 20.0%
!!! AGTTTTGATGAATTAATTTC+AGG + chr5_1:60015270-60015289 Msa0740810:intron 20.0%
!! ATCCATTTCTTATGAAAATA+AGG + chr5_1:60016813-60016832 Msa0740810:intron 20.0%
!!! TTTGATAATATTACATGACA+AGG - chr5_1:60017370-60017389 None:intergenic 20.0%
!!! GAAAAAGTATATAAAGACAT+TGG - chr5_1:60017395-60017414 None:intergenic 20.0%
!!! CTTTTTCTAATTATTTTCAG+GGG + chr5_1:60017408-60017427 Msa0740810:intron 20.0%
!!! AATTTTTTAAGTGGTAGATT+TGG - chr5_1:60017606-60017625 None:intergenic 20.0%
!!! AATACCAGAAATTTTTTAAG+TGG - chr5_1:60017615-60017634 None:intergenic 20.0%
!!! ATGTTTTTTCTTTGTTTGAA+TGG - chr5_1:60017668-60017687 None:intergenic 20.0%
!! ATATTACACATCTTATTCAT+TGG - chr5_1:60017847-60017866 None:intergenic 20.0%
!! ATAAGATGTGTAATATGTTA+TGG + chr5_1:60017851-60017870 Msa0740810:intron 20.0%
!! ATATATTTGAACTTATCTAG+TGG + chr5_1:60017983-60018002 Msa0740810:intron 20.0%
!!! GTTAACTATTTTATTTGTTG+AGG - chr5_1:60018050-60018069 None:intergenic 20.0%
!! TAATATGTACTTAGTATTTC+TGG + chr5_1:60018115-60018134 Msa0740810:intron 20.0%
!!! TGCATGTATTTTTTTTTTGA+AGG + chr5_1:60018455-60018474 Msa0740810:intron 20.0%
!!! CTAAGCAAAATATTGATTAT+AGG - chr5_1:60018513-60018532 None:intergenic 20.0%
!!! CTATAATCAATATTTTGCTT+AGG + chr5_1:60018511-60018530 Msa0740810:intron 20.0%
!!! CACTTTTTGATTGATTTTAA+TGG - chr5_1:60018621-60018640 None:intergenic 20.0%
!!! CACTTTTTGATTGATTTTAA+TGG - chr5_1:60018621-60018640 None:intergenic 20.0%
!!! CAGATTAGTCTTTAAATTAT+AGG - chr5_1:60018763-60018782 None:intergenic 20.0%
!! TTAACAATGTAAAGATTTGT+TGG + chr5_1:60018791-60018810 Msa0740810:intron 20.0%
!!! ATTTTCTCTTTATATTTCAG+TGG + chr5_1:60018936-60018955 Msa0740810:intron 20.0%
!! TGCAAGTTTGTAAAAATTAA+GGG - chr5_1:60019421-60019440 None:intergenic 20.0%
!! TTGCAAGTTTGTAAAAATTA+AGG - chr5_1:60019422-60019441 None:intergenic 20.0%
!! GAACATCAAATTTAATGATT+CGG - chr5_1:60019658-60019677 None:intergenic 20.0%
!! AATTAGAAAATTGGAAAATG+GGG - chr5_1:60020133-60020152 None:intergenic 20.0%
!!! TTGTTTGCTTTGTTTTATTT+TGG + chr5_1:60020588-60020607 Msa0740810:intron 20.0%
!!! AAATATTTTCTTACAAAGGT+TGG - chr5_1:60022044-60022063 None:intergenic 20.0%
!!! CCAAAAATATTTTCTTACAA+AGG - chr5_1:60022048-60022067 None:intergenic 20.0%
!!! CCTTTGTAAGAAAATATTTT+TGG + chr5_1:60022045-60022064 Msa0740810:three_prime_UTR 20.0%
!! GATGGAAGAAAAATATTAAA+AGG + chr5_1:60022573-60022592 Msa0740810:three_prime_UTR 20.0%
!! TAAATTGATGTAATGTTTCA+TGG - chr5_1:60022733-60022752 None:intergenic 20.0%
! CATAGTGATAAAGTAATCAA+AGG + chr5_1:60013118-60013137 Msa0740810:intron 25.0%
! CAGTTAAGAAATGAAAAAAG+TGG - chr5_1:60013414-60013433 None:intergenic 25.0%
! TTAACTGATTATTTGAACTG+TGG + chr5_1:60013427-60013446 Msa0740810:intron 25.0%
! CAATCAAACAATACCTAAAT+TGG - chr5_1:60013710-60013729 None:intergenic 25.0%
! GTCATAATTTAGTAATTCTC+AGG - chr5_1:60013951-60013970 None:intergenic 25.0%
!!! GGGTTTTAAAATTGTTTTTG+GGG + chr5_1:60014000-60014019 Msa0740810:intron 25.0%
!! TTTGAGTTTCCAAAAAAAAC+AGG + chr5_1:60014127-60014146 Msa0740810:intron 25.0%
! TTGAGTTTCCAAAAAAAACA+GGG + chr5_1:60014128-60014147 Msa0740810:intron 25.0%
! GTTCATCAAAATTACCAATT+TGG - chr5_1:60014165-60014184 None:intergenic 25.0%
! TTAGTTTCCAAAAGAAAATG+TGG - chr5_1:60014228-60014247 None:intergenic 25.0%
! AAAAATAGGCAAGAAGATAA+TGG - chr5_1:60014290-60014309 None:intergenic 25.0%
! CAGATAAAAAGGGAAAAAAT+AGG - chr5_1:60014304-60014323 None:intergenic 25.0%
! AAGCATAACTCAGATAAAAA+GGG - chr5_1:60014314-60014333 None:intergenic 25.0%
!!! TTTCCTTTTTGTTTGTTCAA+TGG + chr5_1:60014353-60014372 Msa0740810:intron 25.0%
! AAACCATTGAACAAACAAAA+AGG - chr5_1:60014359-60014378 None:intergenic 25.0%
! TTTCTAATGTTTGCATTGTT+TGG + chr5_1:60014421-60014440 Msa0740810:intron 25.0%
! TTCATCAAAAATCATGCAAA+GGG - chr5_1:60014971-60014990 None:intergenic 25.0%
! ATTCATCAAAAATCATGCAA+AGG - chr5_1:60014972-60014991 None:intergenic 25.0%
! CTTTCTATTAATCAAGCTTA+GGG - chr5_1:60015112-60015131 None:intergenic 25.0%
! TATATGTTTACTTCCAAACT+AGG + chr5_1:60015210-60015229 Msa0740810:intron 25.0%
! ATATGTTTACTTCCAAACTA+GGG + chr5_1:60015211-60015230 Msa0740810:intron 25.0%
! TTCATCAAAACTCATCTAAA+GGG - chr5_1:60015262-60015281 None:intergenic 25.0%
! ATTCATCAAAACTCATCTAA+AGG - chr5_1:60015263-60015282 None:intergenic 25.0%
! GGCATACAAAGAATTTATTA+TGG + chr5_1:60015345-60015364 Msa0740810:CDS 25.0%
!! AAAAGCAAAGATTTTACCAT+TGG - chr5_1:60015529-60015548 None:intergenic 25.0%
! TTTGATGAACAACATTTAGT+TGG + chr5_1:60015551-60015570 Msa0740810:intron 25.0%
! ATTACATGAACCACATATAA+TGG - chr5_1:60015708-60015727 None:intergenic 25.0%
! AAATGAGAACAACACTTAAA+AGG - chr5_1:60015790-60015809 None:intergenic 25.0%
!!! ACATGTTATTTTCAAACTTC+AGG + chr5_1:60015866-60015885 Msa0740810:intron 25.0%
! ACAACATATTAAACAATCCA+TGG - chr5_1:60016302-60016321 None:intergenic 25.0%
! CATTGACACCATTTATAATT+TGG - chr5_1:60016449-60016468 None:intergenic 25.0%
!! CAAATTATAAATGGTGTCAA+TGG + chr5_1:60016447-60016466 Msa0740810:CDS 25.0%
! TTTCTTGTTAGATTGTTGAA+AGG + chr5_1:60016641-60016660 Msa0740810:intron 25.0%
! TTCTTGTTAGATTGTTGAAA+GGG + chr5_1:60016642-60016661 Msa0740810:intron 25.0%
!!! CTCCTTATTTTCATAAGAAA+TGG - chr5_1:60016818-60016837 None:intergenic 25.0%
! GAATCTTCAATATATATCCA+AGG + chr5_1:60016926-60016945 Msa0740810:intron 25.0%
! TTCAATATATATCCAAGGAA+GGG + chr5_1:60016931-60016950 Msa0740810:intron 25.0%
!!! TTATTCTAGTTTTGTTCATG+TGG + chr5_1:60017092-60017111 Msa0740810:intron 25.0%
! TCTACCACTTAAAAAATTTC+TGG + chr5_1:60017608-60017627 Msa0740810:intron 25.0%
!!! ATTTTATTTGATGCTGTCAT+CGG - chr5_1:60017946-60017965 None:intergenic 25.0%
! AAGTACATATTATTCAGCAA+TGG - chr5_1:60018107-60018126 None:intergenic 25.0%
! GATTTATTTAATCCTAAGCT+AGG - chr5_1:60018421-60018440 None:intergenic 25.0%
! TTAATGGTTTATGACCAAAT+TGG - chr5_1:60018605-60018624 None:intergenic 25.0%
! TATACTCTCATTAGTCAATT+TGG + chr5_1:60018648-60018667 Msa0740810:intron 25.0%
! TTAATGGTTTATGACCAAAT+TGG - chr5_1:60018605-60018624 None:intergenic 25.0%
! TATACTCTCATTAGTCAATT+TGG + chr5_1:60018648-60018667 Msa0740810:intron 25.0%
! ATTTAAAGACTAATCTGTGT+TGG + chr5_1:60018766-60018785 Msa0740810:intron 25.0%
! ATATTGGTATTCGAAATAGA+GGG - chr5_1:60018915-60018934 None:intergenic 25.0%
! AATATTGGTATTCGAAATAG+AGG - chr5_1:60018916-60018935 None:intergenic 25.0%
!! CATGTATTTGCATTATGTTT+TGG - chr5_1:60019110-60019129 None:intergenic 25.0%
!! ATTGTCACATTTTCTTCTTT+TGG - chr5_1:60019156-60019175 None:intergenic 25.0%
! AGAAGAAAATGTGACAATTT+CGG + chr5_1:60019158-60019177 Msa0740810:intron 25.0%
! GCAAGTTTGTAAAAATTAAG+GGG - chr5_1:60019420-60019439 None:intergenic 25.0%
! CTATAAATAGTAGACCAAAA+GGG - chr5_1:60019471-60019490 None:intergenic 25.0%
!!! TTGACTTGGTCAAAATTAAT+GGG - chr5_1:60019518-60019537 None:intergenic 25.0%
!! TCAATTTAGTTTCAGTTCAT+CGG - chr5_1:60019905-60019924 None:intergenic 25.0%
! TCAAAAGAGAAAGTGAAATA+TGG - chr5_1:60019961-60019980 None:intergenic 25.0%
! AAAACATAAGGCAACAAAAA+TGG - chr5_1:60020080-60020099 None:intergenic 25.0%
! GTAAATAAAACACAAGGAAA+AGG - chr5_1:60020675-60020694 None:intergenic 25.0%
! CAACAAGTAAATAAAACACA+AGG - chr5_1:60020681-60020700 None:intergenic 25.0%
! CAAGCTTATTTCATCAAATA+TGG - chr5_1:60020730-60020749 None:intergenic 25.0%
! ATCCATGAAGTTTCAATTAA+AGG - chr5_1:60020830-60020849 None:intergenic 25.0%
! TTCCAACTTAATACAAATCT+TGG - chr5_1:60021160-60021179 None:intergenic 25.0%
!!! GATTTGTATTAAGTTGGAAA+AGG + chr5_1:60021161-60021180 Msa0740810:three_prime_UTR 25.0%
! AACAATGAACAGCATTTAAT+TGG + chr5_1:60021390-60021409 Msa0740810:three_prime_UTR 25.0%
!!! TGAGCTATTTTTCTAAAATG+AGG + chr5_1:60021439-60021458 Msa0740810:three_prime_UTR 25.0%
!!! GAGCTATTTTTCTAAAATGA+GGG + chr5_1:60021440-60021459 Msa0740810:three_prime_UTR 25.0%
! ACGAATACAGTGAATATAAA+AGG + chr5_1:60021874-60021893 Msa0740810:three_prime_UTR 25.0%
! TTATGCTTCAACATAATGAT+TGG + chr5_1:60021982-60022001 Msa0740810:three_prime_UTR 25.0%
!!! AGAAGTATGTTTTAACAAGA+TGG + chr5_1:60022555-60022574 Msa0740810:three_prime_UTR 25.0%
! ACATCAATTTAAGTGTAGTA+AGG + chr5_1:60022742-60022761 Msa0740810:three_prime_UTR 25.0%
!!! TTTTATTTGTCCAAATGTGT+AGG + chr5_1:60022971-60022990 Msa0740810:intron 25.0%
! GATAACTTATGTAGTAGTTT+AGG + chr5_1:60023282-60023301 Msa0740810:three_prime_UTR 25.0%
! ATTGAGAATAGTTTATGTAC+TGG + chr5_1:60023320-60023339 Msa0740810:three_prime_UTR 25.0%
GTGATAAGAAAGAAGAAAAG+AGG - chr5_1:60013283-60013302 None:intergenic 30.0%
! AAAGTACCAAGATATTTGGT+TGG - chr5_1:60013606-60013625 None:intergenic 30.0%
! AAGCAAAGTACCAAGATATT+TGG - chr5_1:60013610-60013629 None:intergenic 30.0%
!! TGTTTTTACCCAATAACTCT+AGG + chr5_1:60013782-60013801 Msa0740810:intron 30.0%
!!! CAATCTTCTGAGATTGTTTT+GGG + chr5_1:60013980-60013999 Msa0740810:intron 30.0%
!!! ACATTAGTCCCTGTTTTTTT+TGG - chr5_1:60014139-60014158 None:intergenic 30.0%
GAAAATGTGGCATCTAATTT+AGG - chr5_1:60014215-60014234 None:intergenic 30.0%
! TTAGATGCCACATTTTCTTT+TGG + chr5_1:60014218-60014237 Msa0740810:intron 30.0%
GAAGCATAACTCAGATAAAA+AGG - chr5_1:60014315-60014334 None:intergenic 30.0%
CTTCTGTAATTTCTATTGTC+AGG + chr5_1:60014451-60014470 Msa0740810:intron 30.0%
TGTAATTTCTATTGTCAGGT+TGG + chr5_1:60014455-60014474 Msa0740810:intron 30.0%
!!! GTTTTGTTTGAACCGATAAT+AGG + chr5_1:60014622-60014641 Msa0740810:intron 30.0%
!!! TTTTGAAGCCTATGAAAAGA+AGG + chr5_1:60014795-60014814 Msa0740810:intron 30.0%
TCTTGTGCTTTATGATTATG+AGG + chr5_1:60014931-60014950 Msa0740810:intron 30.0%
ACTCATAGTTTACTGATAAG+TGG + chr5_1:60015023-60015042 Msa0740810:intron 30.0%
CCTTTCTATTAATCAAGCTT+AGG - chr5_1:60015113-60015132 None:intergenic 30.0%
CCTAAGCTTGATTAATAGAA+AGG + chr5_1:60015110-60015129 Msa0740810:intron 30.0%
!!! CAACTCTTTCAAGTTTTTCA+TGG + chr5_1:60015324-60015343 Msa0740810:CDS 30.0%
CAACAGAAAATGATAGAACT+TGG + chr5_1:60015466-60015485 Msa0740810:CDS 30.0%
ATGATAGAACTTGGAATAAC+AGG + chr5_1:60015475-60015494 Msa0740810:CDS 30.0%
ATTCTTTGATTACTGTGACT+TGG + chr5_1:60015616-60015635 Msa0740810:intron 30.0%
! ATTTTCAAACTTCAGGACAA+AGG + chr5_1:60015873-60015892 Msa0740810:intron 30.0%
! TTTTCAAACTTCAGGACAAA+GGG + chr5_1:60015874-60015893 Msa0740810:intron 30.0%
CTACTTCTTTCCTATTCTAT+TGG + chr5_1:60015985-60016004 Msa0740810:intron 30.0%
ATAACAACTGCCAATAGAAT+AGG - chr5_1:60015998-60016017 None:intergenic 30.0%
TGACACCATTTATAATTTGG+CGG - chr5_1:60016446-60016465 None:intergenic 30.0%
AATTGCAACTCAAAATCTGT+AGG + chr5_1:60016546-60016565 Msa0740810:intron 30.0%
!! AATCTGTAGGTATTGAAGAA+AGG + chr5_1:60016559-60016578 Msa0740810:intron 30.0%
ACAATCTAACAAGAAAGTGA+GGG - chr5_1:60016637-60016656 None:intergenic 30.0%
AACAATCTAACAAGAAAGTG+AGG - chr5_1:60016638-60016657 None:intergenic 30.0%
TCTTGTTAGATTGTTGAAAG+GGG + chr5_1:60016643-60016662 Msa0740810:intron 30.0%
CTTCAATATATATCCAAGGA+AGG + chr5_1:60016930-60016949 Msa0740810:intron 30.0%
GTTATCTCAAAACTTGAGTT+AGG - chr5_1:60017000-60017019 None:intergenic 30.0%
! TCAATGTTCTTTTACGTTGT+TGG + chr5_1:60017289-60017308 Msa0740810:intron 30.0%
AAAATTGAAGTGACTATAGC+AGG + chr5_1:60017431-60017450 Msa0740810:CDS 30.0%
TCAAACAGATAACTAAAAGG+AGG - chr5_1:60017524-60017543 None:intergenic 30.0%
CCATCAAACAGATAACTAAA+AGG - chr5_1:60017527-60017546 None:intergenic 30.0%
!! CCTTTTAGTTATCTGTTTGA+TGG + chr5_1:60017524-60017543 Msa0740810:CDS 30.0%
! TAGTTATCTGTTTGATGGAT+TGG + chr5_1:60017529-60017548 Msa0740810:CDS 30.0%
!!! TAGATTTGGCTCTTTTTACT+GGG - chr5_1:60017592-60017611 None:intergenic 30.0%
!! AGGTCTGAAGCTATTTTATT+TGG - chr5_1:60018030-60018049 None:intergenic 30.0%
!! ATGTGCTTTGATTTTAGTAC+AGG - chr5_1:60018189-60018208 None:intergenic 30.0%
ATTTACGTATCTATAGTCCA+AGG + chr5_1:60018242-60018261 Msa0740810:intron 30.0%
AAAATGAAACTTCCTAGCTT+AGG + chr5_1:60018406-60018425 Msa0740810:intron 30.0%
! GACTAATGAGAGTATAGTTT+AGG - chr5_1:60018644-60018663 None:intergenic 30.0%
! GACTAATGAGAGTATAGTTT+AGG - chr5_1:60018644-60018663 None:intergenic 30.0%
TAAATGAGAGAGATATGAAG+AGG - chr5_1:60018855-60018874 None:intergenic 30.0%
AAAACTCAGGAAATAGTGAA+GGG - chr5_1:60018969-60018988 None:intergenic 30.0%
AAAAACTCAGGAAATAGTGA+AGG - chr5_1:60018970-60018989 None:intergenic 30.0%
GAAGAAAATGTGACAATTTC+GGG + chr5_1:60019159-60019178 Msa0740810:intron 30.0%
AAGAAAATGTGACAATTTCG+GGG + chr5_1:60019160-60019179 Msa0740810:intron 30.0%
GCGAAAATACTGAAATTGAT+AGG + chr5_1:60019289-60019308 Msa0740810:intron 30.0%
ATTAAAACTCACATAAGTGG+AGG - chr5_1:60019347-60019366 None:intergenic 30.0%
GTCATTAAAACTCACATAAG+TGG - chr5_1:60019350-60019369 None:intergenic 30.0%
TGACCCTTAAACTTGTAAAA+TGG + chr5_1:60019445-60019464 Msa0740810:intron 30.0%
GCTATAAATAGTAGACCAAA+AGG - chr5_1:60019472-60019491 None:intergenic 30.0%
!! GTTGACTTGGTCAAAATTAA+TGG - chr5_1:60019519-60019538 None:intergenic 30.0%
TGCAAACTAAAGGTCAAAAT+CGG + chr5_1:60019570-60019589 Msa0740810:intron 30.0%
!!! AGTCTCATTTGATTTTGACT+GGG - chr5_1:60019694-60019713 None:intergenic 30.0%
!! AAGTCTCATTTGATTTTGAC+TGG - chr5_1:60019695-60019714 None:intergenic 30.0%
! CTTTTACAAAGTTGCGAATT+TGG - chr5_1:60019776-60019795 None:intergenic 30.0%
GAGAAAGTGAAATATGGAAA+TGG - chr5_1:60019955-60019974 None:intergenic 30.0%
ATCAGAACTAGGAAAACATA+AGG - chr5_1:60020092-60020111 None:intergenic 30.0%
!!! ATGTTTTCCTAGTTCTGATT+AGG + chr5_1:60020093-60020112 Msa0740810:intron 30.0%
!!! TGTTTTCCTAGTTCTGATTA+GGG + chr5_1:60020094-60020113 Msa0740810:intron 30.0%
TATAAACCCTAATCAGAACT+AGG - chr5_1:60020103-60020122 None:intergenic 30.0%
!! TAGTCACCATTTTTGTTTCA+AGG + chr5_1:60020180-60020199 Msa0740810:intron 30.0%
!! AGTCACCATTTTTGTTTCAA+GGG + chr5_1:60020181-60020200 Msa0740810:intron 30.0%
ACAAACCCTTGAAACAAAAA+TGG - chr5_1:60020189-60020208 None:intergenic 30.0%
! ACACCTTTGATCAAAAGTAT+CGG + chr5_1:60020436-60020455 Msa0740810:intron 30.0%
!! TAGTGTTAGCTTTGTATCAT+GGG + chr5_1:60020625-60020644 Msa0740810:intron 30.0%
!!! TGACTTGTTTTTTGCAGTTT+TGG + chr5_1:60020791-60020810 Msa0740810:intron 30.0%
!!! TGTTTTTTGCAGTTTTGGTT+TGG + chr5_1:60020796-60020815 Msa0740810:intron 30.0%
CACCTTTAATTGAAACTTCA+TGG + chr5_1:60020825-60020844 Msa0740810:exon 30.0%
TTGAAACTTCATGGATAGTT+CGG + chr5_1:60020834-60020853 Msa0740810:exon 30.0%
TGTGATAGTATTCATGATGA+AGG + chr5_1:60020871-60020890 Msa0740810:three_prime_UTR 30.0%
TAGTATTCATGATGAAGGTA+TGG + chr5_1:60020876-60020895 Msa0740810:three_prime_UTR 30.0%
!! TAGAGAGTATGCTTTGAAAA+AGG + chr5_1:60020987-60021006 Msa0740810:three_prime_UTR 30.0%
!! AGAGAGTATGCTTTGAAAAA+GGG + chr5_1:60020988-60021007 Msa0740810:three_prime_UTR 30.0%
!!! ATGCTTTGAAAAAGGGTTTT+CGG + chr5_1:60020995-60021014 Msa0740810:three_prime_UTR 30.0%
!!! ATCTCTTTTTTTCGATGTTC+TGG - chr5_1:60021028-60021047 None:intergenic 30.0%
ACATCGAAAAAAAGAGATGA+TGG + chr5_1:60021030-60021049 Msa0740810:three_prime_UTR 30.0%
!!! ACAATTTTTTGTCTTAGGTG+GGG - chr5_1:60021133-60021152 None:intergenic 30.0%
!!! GACAATTTTTTGTCTTAGGT+GGG - chr5_1:60021134-60021153 None:intergenic 30.0%
AACTTAATACAAATCTTGGC+AGG - chr5_1:60021156-60021175 None:intergenic 30.0%
TGCCAAGATTTGTATTAAGT+TGG + chr5_1:60021155-60021174 Msa0740810:three_prime_UTR 30.0%
!! TGTATTAAGTTGGAAAAGGA+TGG + chr5_1:60021165-60021184 Msa0740810:three_prime_UTR 30.0%
AATAGATCGGAAAGTCTTAA+TGG - chr5_1:60021307-60021326 None:intergenic 30.0%
!! ATCATGTCTTTTTCGCAAAA+TGG - chr5_1:60021360-60021379 None:intergenic 30.0%
CAGCATTTAATTGGAAAAGA+AGG + chr5_1:60021399-60021418 Msa0740810:three_prime_UTR 30.0%
TTAATTGGAAAAGAAGGTGA+TGG + chr5_1:60021405-60021424 Msa0740810:three_prime_UTR 30.0%
TTTCTTCTACGACATAGATT+TGG + chr5_1:60021476-60021495 Msa0740810:three_prime_UTR 30.0%
! TTCATGTAAGGAATGTGTTT+TGG + chr5_1:60021508-60021527 Msa0740810:three_prime_UTR 30.0%
! TCATGTAAGGAATGTGTTTT+GGG + chr5_1:60021509-60021528 Msa0740810:three_prime_UTR 30.0%
! AGAGCTACTTATGAGTATTT+TGG + chr5_1:60021546-60021565 Msa0740810:three_prime_UTR 30.0%
! AAAAGGCATGTCATACTTAT+TGG - chr5_1:60021604-60021623 None:intergenic 30.0%
AATCAACATTACTTGGATGT+GGG + chr5_1:60021655-60021674 Msa0740810:three_prime_UTR 30.0%
!!! CAACTGGTTTTGAAGATAAA+TGG + chr5_1:60021940-60021959 Msa0740810:three_prime_UTR 30.0%
! AACATAATGATTGGTTGAGT+GGG + chr5_1:60021991-60022010 Msa0740810:three_prime_UTR 30.0%
!!! GTAAGAAAATATTTTTGGGC+AGG + chr5_1:60022050-60022069 Msa0740810:three_prime_UTR 30.0%
AGCAGAAAAAGAATTTGAAG+CGG + chr5_1:60022187-60022206 Msa0740810:three_prime_UTR 30.0%
AGCTTGAACTTCTTTGAATT+TGG - chr5_1:60022294-60022313 None:intergenic 30.0%
CTTCAAAGTTGTGTTTAATC+AGG + chr5_1:60022427-60022446 Msa0740810:three_prime_UTR 30.0%
CTTGTTAAAACATACTTCTC+TGG - chr5_1:60022554-60022573 None:intergenic 30.0%
CAATTTAAGTGTAGTAAGGA+TGG + chr5_1:60022746-60022765 Msa0740810:three_prime_UTR 30.0%
GGAGAATACATAATTTCTGA+AGG - chr5_1:60022923-60022942 None:intergenic 30.0%
CTATGTAGAATCATCTATTG+AGG + chr5_1:60023037-60023056 Msa0740810:three_prime_UTR 30.0%
GATAACATATGTACTAGTTG+AGG + chr5_1:60023260-60023279 Msa0740810:three_prime_UTR 30.0%
!! AATAGTTTATGTACTGGTTG+AGG + chr5_1:60023326-60023345 Msa0740810:three_prime_UTR 30.0%
TACAGTACATACACAACTTC+GGG - chr5_1:60013224-60013243 None:intergenic 35.0%
CTACAGTACATACACAACTT+CGG - chr5_1:60013225-60013244 None:intergenic 35.0%
GAAAGAAGAAAAGAGGAAGA+AGG - chr5_1:60013276-60013295 None:intergenic 35.0%
!!! GGAATTTAGTTTTGTGAAGC+TGG + chr5_1:60013448-60013467 Msa0740810:intron 35.0%
TCCAACAAGTTGTTGATCAA+AGG + chr5_1:60013508-60013527 Msa0740810:CDS 35.0%
ACCTTTGATCAACAACTTGT+TGG - chr5_1:60013512-60013531 None:intergenic 35.0%
AACAAGTTGTTGATCAAAGG+TGG + chr5_1:60013511-60013530 Msa0740810:CDS 35.0%
CATATACATCAGCAACATGT+TGG - chr5_1:60013558-60013577 None:intergenic 35.0%
GCTGATGTATATGTTGAAGA+TGG + chr5_1:60013565-60013584 Msa0740810:CDS 35.0%
TACCAAGATATTTGGTTGGA+CGG - chr5_1:60013602-60013621 None:intergenic 35.0%
TAATTCTCAGGGATTACTTG+TGG - chr5_1:60013939-60013958 None:intergenic 35.0%
CCAAAACAATCTCAGAAGAT+TGG - chr5_1:60013982-60014001 None:intergenic 35.0%
!!! CCAATCTTCTGAGATTGTTT+TGG + chr5_1:60013979-60013998 Msa0740810:intron 35.0%
!! AAAATCTTTAAGGCCTAACC+TGG - chr5_1:60014524-60014543 None:intergenic 35.0%
TTGTTTGAACCGATAATAGG+AGG + chr5_1:60014625-60014644 Msa0740810:intron 35.0%
ACTTCGTTATGCCAGTTAAT+GGG + chr5_1:60014758-60014777 Msa0740810:CDS 35.0%
GCTGTTAAATTCCCATTAAC+TGG - chr5_1:60014772-60014791 None:intergenic 35.0%
GTTAATGGGAATTTAACAGC+TGG + chr5_1:60014772-60014791 Msa0740810:CDS 35.0%
! GTTCTTTGCCTTCTTTTCAT+AGG - chr5_1:60014806-60014825 None:intergenic 35.0%
! AAGAACTCTTGCATGGATTA+TGG + chr5_1:60014820-60014839 Msa0740810:CDS 35.0%
TGAATCTGTTTCGACAGATA+TGG + chr5_1:60014870-60014889 Msa0740810:CDS 35.0%
AGATATGGAGATCATGGTTA+AGG + chr5_1:60014885-60014904 Msa0740810:CDS 35.0%
ATAGTTTACTGATAAGTGGC+AGG + chr5_1:60015027-60015046 Msa0740810:intron 35.0%
GGTACTTCATTTGTAGACTT+AGG + chr5_1:60015131-60015150 Msa0740810:intron 35.0%
AAGGGTTGTTACATATTGTC+AGG - chr5_1:60015244-60015263 None:intergenic 35.0%
CGTCTATGTTTCTTATTCTC+AGG + chr5_1:60015298-60015317 Msa0740810:intron 35.0%
! TTTAAGAAGTGCAAGTCTCT+TGG + chr5_1:60015394-60015413 Msa0740810:CDS 35.0%
! AGCAAAGATTTTACCATTGG+AGG - chr5_1:60015526-60015545 None:intergenic 35.0%
TGAACAACATTTAGTTGGCA+TGG + chr5_1:60015556-60015575 Msa0740810:intron 35.0%
GAACAACATTTAGTTGGCAT+GGG + chr5_1:60015557-60015576 Msa0740810:intron 35.0%
TGTGAACACTCCATTATATG+TGG + chr5_1:60015695-60015714 Msa0740810:CDS 35.0%
!! TGTAATGAGCATTGATGCAA+TGG + chr5_1:60015722-60015741 Msa0740810:CDS 35.0%
TCATGTCCTTTACTCCTAAT+AGG - chr5_1:60016087-60016106 None:intergenic 35.0%
TAGGAGTAAAGGACATGATA+AGG + chr5_1:60016089-60016108 Msa0740810:CDS 35.0%
AACATTATGCGATCACTTTC+AGG - chr5_1:60016173-60016192 None:intergenic 35.0%
TGCTTCATATATTGCAGCAA+AGG + chr5_1:60016228-60016247 Msa0740810:intron 35.0%
GGACTGAATATTTAGTGCTA+CGG + chr5_1:60016249-60016268 Msa0740810:intron 35.0%
! TCTTTTTACAACTTCACAGC+TGG + chr5_1:60016362-60016381 Msa0740810:intron 35.0%
GACTTCCGCCAAATTATAAA+TGG + chr5_1:60016438-60016457 Msa0740810:CDS 35.0%
TGTCAATGGTAATCACTCAA+TGG + chr5_1:60016461-60016480 Msa0740810:intron 35.0%
! TGGTAATCACTCAATGGTTT+TGG + chr5_1:60016467-60016486 Msa0740810:intron 35.0%
!!! TCAATGGTTTTGGATATGTG+TGG + chr5_1:60016477-60016496 Msa0740810:intron 35.0%
CAAAACTTGAGTTAGGATTC+AGG - chr5_1:60016993-60017012 None:intergenic 35.0%
GTAAACATTTGTGTCCAATC+TGG - chr5_1:60017040-60017059 None:intergenic 35.0%
ATTGGACACAAATGTTTACG+AGG + chr5_1:60017041-60017060 Msa0740810:intron 35.0%
TTGGACACAAATGTTTACGA+GGG + chr5_1:60017042-60017061 Msa0740810:intron 35.0%
TTGCGTATAATCACATGTGT+CGG + chr5_1:60017205-60017224 Msa0740810:intron 35.0%
ACATAGCTATCTCTCTTACT+TGG + chr5_1:60017257-60017276 Msa0740810:intron 35.0%
AATGAACTGAAAGTTGTTCC+TGG + chr5_1:60017476-60017495 Msa0740810:CDS 35.0%
!! GTTTGATGGATTGGACAAAA+AGG + chr5_1:60017538-60017557 Msa0740810:CDS 35.0%
!! TCTTTTTACTGGGGCTTTAA+GGG - chr5_1:60017582-60017601 None:intergenic 35.0%
!!! AGATTTGGCTCTTTTTACTG+GGG - chr5_1:60017591-60017610 None:intergenic 35.0%
!!! GTAGATTTGGCTCTTTTTAC+TGG - chr5_1:60017593-60017612 None:intergenic 35.0%
TAGATTTGTGTCCAAAGCAA+TGG + chr5_1:60017740-60017759 Msa0740810:intron 35.0%
AGATTTGTGTCCAAAGCAAT+GGG + chr5_1:60017741-60017760 Msa0740810:intron 35.0%
GAGTTATCTCCATACTTTGT+AGG + chr5_1:60017894-60017913 Msa0740810:intron 35.0%
AACGGTCAATCTAACCAATT+TGG + chr5_1:60018588-60018607 Msa0740810:intron 35.0%
! AGAGGGACAAAAGTTGATTA+AGG - chr5_1:60018898-60018917 None:intergenic 35.0%
CGAGTGGAAAAAAAAAACTC+AGG - chr5_1:60018982-60019001 None:intergenic 35.0%
!!! GTTTTTTTTTTCCACTCGAG+AGG + chr5_1:60018984-60019003 Msa0740810:intron 35.0%
!! GGGCCATTTTACAAGTTTAA+GGG - chr5_1:60019451-60019470 None:intergenic 35.0%
!! AGGGCCATTTTACAAGTTTA+AGG - chr5_1:60019452-60019471 None:intergenic 35.0%
! AACTTGTAAAATGGCCCTTT+TGG + chr5_1:60019454-60019473 Msa0740810:intron 35.0%
TGTCACGTGTATTCTTTATC+AGG - chr5_1:60019634-60019653 None:intergenic 35.0%
GCAACTTTGTAAAAGTAGAG+AGG + chr5_1:60019781-60019800 Msa0740810:intron 35.0%
!! TTTTCAAGCCTTAATGCATG+TGG + chr5_1:60020219-60020238 Msa0740810:intron 35.0%
TTTACCTTGCCAAGTTATGT+AGG + chr5_1:60020485-60020504 Msa0740810:intron 35.0%
AAAGCTACACCTACATAACT+TGG - chr5_1:60020497-60020516 None:intergenic 35.0%
! TATAGTTGCAGTAGCATTGA+TGG + chr5_1:60020526-60020545 Msa0740810:intron 35.0%
!! CTAGTGTTAGCTTTGTATCA+TGG + chr5_1:60020624-60020643 Msa0740810:intron 35.0%
! AATTCTTGTTTGCACAAGAG+AGG + chr5_1:60021068-60021087 Msa0740810:three_prime_UTR 35.0%
! ATTCTTGTTTGCACAAGAGA+GGG + chr5_1:60021069-60021088 Msa0740810:three_prime_UTR 35.0%
!!! CAATTTTTTGTCTTAGGTGG+GGG - chr5_1:60021132-60021151 None:intergenic 35.0%
!!! GGACAATTTTTTGTCTTAGG+TGG - chr5_1:60021135-60021154 None:intergenic 35.0%
!!! GCAGGACAATTTTTTGTCTT+AGG - chr5_1:60021138-60021157 None:intergenic 35.0%
! GCAAGTCCATTTTCTTTGTA+GGG - chr5_1:60021239-60021258 None:intergenic 35.0%
! TGCAAGTCCATTTTCTTTGT+AGG - chr5_1:60021240-60021259 None:intergenic 35.0%
! ATCGAAATCAATGATGATGC+AGG + chr5_1:60021273-60021292 Msa0740810:three_prime_UTR 35.0%
! TGGATGACGATTTTCATGTA+AGG + chr5_1:60021496-60021515 Msa0740810:three_prime_UTR 35.0%
! ATGCCTTTTGCTACATTTGT+AGG + chr5_1:60021615-60021634 Msa0740810:three_prime_UTR 35.0%
ACACCTACAAATGTAGCAAA+AGG - chr5_1:60021621-60021640 None:intergenic 35.0%
! GTAATGTTGATTGACCATGA+TGG - chr5_1:60021647-60021666 None:intergenic 35.0%
CATGGTCAATCAACATTACT+TGG + chr5_1:60021648-60021667 Msa0740810:three_prime_UTR 35.0%
CAATCAACATTACTTGGATG+TGG + chr5_1:60021654-60021673 Msa0740810:three_prime_UTR 35.0%
! TTGTGTGGCTTTTCAAATCA+TGG + chr5_1:60021706-60021725 Msa0740810:three_prime_UTR 35.0%
TATTGTGACAGACCAATGTA+AGG + chr5_1:60021761-60021780 Msa0740810:three_prime_UTR 35.0%
! CATTTTGTACAGCCTTACAT+TGG - chr5_1:60021776-60021795 None:intergenic 35.0%
TATGATACACACACAACAAC+TGG + chr5_1:60021924-60021943 Msa0740810:three_prime_UTR 35.0%
AAGCATAAACTTGTCGATGA+AGG - chr5_1:60021970-60021989 None:intergenic 35.0%
! CAACATAATGATTGGTTGAG+TGG + chr5_1:60021990-60022009 Msa0740810:three_prime_UTR 35.0%
!!! TGAAGCGGATTTTAATTCAC+TGG + chr5_1:60022202-60022221 Msa0740810:three_prime_UTR 35.0%
TCCATTGAAAAGCAATTCCA+AGG + chr5_1:60022254-60022273 Msa0740810:three_prime_UTR 35.0%
!! ACCTTGGAATTGCTTTTCAA+TGG - chr5_1:60022258-60022277 None:intergenic 35.0%
! CTTTGCTACTTATCATGTGT+TGG + chr5_1:60022367-60022386 Msa0740810:three_prime_UTR 35.0%
AACATTCACAGCTGAAATCA+TGG - chr5_1:60022457-60022476 None:intergenic 35.0%
! TGTTCGTTGTTTGAGTTTAG+AGG + chr5_1:60022473-60022492 Msa0740810:three_prime_UTR 35.0%
AGAATCTGAAGATGCAACTA+AGG + chr5_1:60022703-60022722 Msa0740810:three_prime_UTR 35.0%
GATGACTCAAATCCAAACAA+TGG + chr5_1:60022800-60022819 Msa0740810:three_prime_UTR 35.0%
ATATTGCACTCCTACACATT+TGG - chr5_1:60022984-60023003 None:intergenic 35.0%
! AATGTGTAGGAGTGCAATAT+TGG + chr5_1:60022984-60023003 Msa0740810:intron 35.0%
GGAAACATATGTACTAGTTC+AGG + chr5_1:60023194-60023213 Msa0740810:three_prime_UTR 35.0%
TGTGAAGCTGGAATTGAATC+CGG + chr5_1:60013460-60013479 Msa0740810:CDS 40.0%
! ATTAGAGTGTTCTCCTCTCT+AGG + chr5_1:60014026-60014045 Msa0740810:intron 40.0%
TGGACCAACACATGAATTGT+TGG - chr5_1:60014076-60014095 None:intergenic 40.0%
!! TTCTGAGATTAGTCAGTCCT+TGG + chr5_1:60014097-60014116 Msa0740810:intron 40.0%
! AGATTAGTCAGTCCTTGGAT+CGG + chr5_1:60014102-60014121 Msa0740810:intron 40.0%
GAAACTCAAAATCCGATCCA+AGG - chr5_1:60014117-60014136 None:intergenic 40.0%
GGGACTAATGTGTTCCAAAT+TGG + chr5_1:60014148-60014167 Msa0740810:intron 40.0%
GGATCAATGCCTCCTATTAT+CGG - chr5_1:60014637-60014656 None:intergenic 40.0%
GACTTCGTTATGCCAGTTAA+TGG + chr5_1:60014757-60014776 Msa0740810:CDS 40.0%
CGAAACAGATTCATCCCATT+TGG - chr5_1:60014863-60014882 None:intergenic 40.0%
TTCGACAGATATGGAGATCA+TGG + chr5_1:60014879-60014898 Msa0740810:CDS 40.0%
GAGATCATGGTTAAGGAGAA+AGG + chr5_1:60014892-60014911 Msa0740810:CDS 40.0%
TGCACTTCTTAAATCCTTGC+AGG - chr5_1:60015387-60015406 None:intergenic 40.0%
TTGGAATAACAGGTCCTGAA+GGG + chr5_1:60015485-60015504 Msa0740810:CDS 40.0%
GACTTGGATACCTATGTAGT+TGG + chr5_1:60015632-60015651 Msa0740810:intron 40.0%
TGGATACCTATGTAGTTGGA+AGG + chr5_1:60015636-60015655 Msa0740810:intron 40.0%
TGCAATGGAAGAAATTGCGA+AGG + chr5_1:60015737-60015756 Msa0740810:CDS 40.0%
ACTTCAGGACAAAGGGTAAT+CGG + chr5_1:60015881-60015900 Msa0740810:intron 40.0%
TTTGCTGCAGTCTCAAAATC+AGG - chr5_1:60015956-60015975 None:intergenic 40.0%
GTCCTTTACTCCTAATAGGA+GGG - chr5_1:60016083-60016102 None:intergenic 40.0%
TGTCCTTTACTCCTAATAGG+AGG - chr5_1:60016084-60016103 None:intergenic 40.0%
GTTGTGAGCTCAACTTTACT+AGG + chr5_1:60016317-60016336 Msa0740810:intron 40.0%
TTTACAACTTCACAGCTGGT+AGG + chr5_1:60016366-60016385 Msa0740810:intron 40.0%
TATTGAAGAAAGGATGCACG+TGG + chr5_1:60016569-60016588 Msa0740810:CDS 40.0%
TAACAAGAAAGTGAGGGCTT+AGG - chr5_1:60016631-60016650 None:intergenic 40.0%
TCAGGAATCTGGTCAAATGT+CGG + chr5_1:60016723-60016742 Msa0740810:intron 40.0%
CAGGATGATAATATCTGCGT+CGG - chr5_1:60016974-60016993 None:intergenic 40.0%
AAAATCTCACCACTCCAGAT+TGG + chr5_1:60017023-60017042 Msa0740810:CDS 40.0%
ACACAAATGTTTACGAGGGA+TGG + chr5_1:60017046-60017065 Msa0740810:intron 40.0%
AATGTTTACGAGGGATGGAA+AGG + chr5_1:60017051-60017070 Msa0740810:intron 40.0%
GGTTCGACACATTGAAATGT+CGG + chr5_1:60017226-60017245 Msa0740810:intron 40.0%
! CATTTGTTGAACCTCGACAT+AGG - chr5_1:60017318-60017337 None:intergenic 40.0%
ATTGAAGTGACTATAGCAGG+AGG + chr5_1:60017434-60017453 Msa0740810:CDS 40.0%
TGAAAGTTGTTCCTGGTACT+GGG + chr5_1:60017483-60017502 Msa0740810:CDS 40.0%
! CTCTTTTTACTGGGGCTTTA+AGG - chr5_1:60017583-60017602 None:intergenic 40.0%
TCCAAAGCAATGGGAGAAAA+AGG + chr5_1:60017750-60017769 Msa0740810:intron 40.0%
! TCCTTTTTCTCCCATTGCTT+TGG - chr5_1:60017754-60017773 None:intergenic 40.0%
ATGGTTACTGATGCTGAACT+TGG + chr5_1:60017870-60017889 Msa0740810:intron 40.0%
TATCTCCATACTTTGTAGGC+TGG + chr5_1:60017898-60017917 Msa0740810:intron 40.0%
TCAAACCAGCCTACAAAGTA+TGG - chr5_1:60017906-60017925 None:intergenic 40.0%
AGCCCACAATTCTTACTTGA+TGG + chr5_1:60019267-60019286 Msa0740810:intron 40.0%
CGCCATCAAGTAAGAATTGT+GGG - chr5_1:60019272-60019291 None:intergenic 40.0%
TCGCCATCAAGTAAGAATTG+TGG - chr5_1:60019273-60019292 None:intergenic 40.0%
TTTGCACACACCATCAACTT+TGG - chr5_1:60019556-60019575 None:intergenic 40.0%
! TGATGGTGTGTGCAAACTAA+AGG + chr5_1:60019560-60019579 Msa0740810:intron 40.0%
!!! TGATACCTTTTTCAGCAGCA+GGG - chr5_1:60020009-60020028 None:intergenic 40.0%
!! GCACCGATACTTTTGATCAA+AGG - chr5_1:60020442-60020461 None:intergenic 40.0%
TAACTTGGCAAGGTAAACCA+AGG - chr5_1:60020482-60020501 None:intergenic 40.0%
TACACCTACATAACTTGGCA+AGG - chr5_1:60020492-60020511 None:intergenic 40.0%
! GTGTGGTATTGAAATGTTGC+AGG + chr5_1:60020548-60020567 Msa0740810:intron 40.0%
! CTGATGATGATGAAGCATGT+TGG + chr5_1:60020911-60020930 Msa0740810:three_prime_UTR 40.0%
!! CTTTGAAAAAGGGTTTTCGG+TGG + chr5_1:60020998-60021017 Msa0740810:three_prime_UTR 40.0%
GCAAACAAGAATTGCATAGC+AGG - chr5_1:60021061-60021080 None:intergenic 40.0%
! TTCTTGTTTGCACAAGAGAG+GGG + chr5_1:60021070-60021089 Msa0740810:three_prime_UTR 40.0%
AGTTGGAAAAGGATGGTTTG+TGG + chr5_1:60021172-60021191 Msa0740810:three_prime_UTR 40.0%
CCGCATTGTTGACAATAGAT+CGG - chr5_1:60021320-60021339 None:intergenic 40.0%
CCGATCTATTGTCAACAATG+CGG + chr5_1:60021317-60021336 Msa0740810:three_prime_UTR 40.0%
TCTATTGTCAACAATGCGGA+AGG + chr5_1:60021321-60021340 Msa0740810:three_prime_UTR 40.0%
CTATTGTCAACAATGCGGAA+GGG + chr5_1:60021322-60021341 Msa0740810:three_prime_UTR 40.0%
TTTGTAGGTGTGAACCATCA+TGG + chr5_1:60021630-60021649 Msa0740810:three_prime_UTR 40.0%
AAGACACAGAGTCATTTGTG+TGG + chr5_1:60021691-60021710 Msa0740810:three_prime_UTR 40.0%
TCATGGCTTCATTGTATGCT+TGG + chr5_1:60021723-60021742 Msa0740810:three_prime_UTR 40.0%
GCTTCATTGTATGCTTGGAA+AGG + chr5_1:60021728-60021747 Msa0740810:three_prime_UTR 40.0%
TGTAGGGAAGACTAACTCAA+TGG - chr5_1:60021799-60021818 None:intergenic 40.0%
TATGCCATAAACACCACCTA+TGG - chr5_1:60021827-60021846 None:intergenic 40.0%
! CTGTATTCGTTGAGCTTTTC+AGG - chr5_1:60021864-60021883 None:intergenic 40.0%
TAAAAGGATCAAGTCTGCGA+TGG + chr5_1:60021890-60021909 Msa0740810:three_prime_UTR 40.0%
!! TGTATGAAGAGCGTCATAGA+TGG + chr5_1:60022015-60022034 Msa0740810:three_prime_UTR 40.0%
!! GTATGAAGAGCGTCATAGAT+GGG + chr5_1:60022016-60022035 Msa0740810:three_prime_UTR 40.0%
AGCATGCATGCTTTCTTTGA+TGG + chr5_1:60022098-60022117 Msa0740810:three_prime_UTR 40.0%
GCATGCATGCTTTCTTTGAT+GGG + chr5_1:60022099-60022118 Msa0740810:three_prime_UTR 40.0%
! TGCTACTTATCATGTGTTGG+AGG + chr5_1:60022370-60022389 Msa0740810:three_prime_UTR 40.0%
TACTTATCATGTGTTGGAGG+AGG + chr5_1:60022373-60022392 Msa0740810:three_prime_UTR 40.0%
CAGATAACACATGACAACAC+AGG - chr5_1:60022502-60022521 None:intergenic 40.0%
AGTTGCATCTTCAGATTCTG+CGG - chr5_1:60022702-60022721 None:intergenic 40.0%
TCAAATCCAAACAATGGTGC+TGG + chr5_1:60022806-60022825 Msa0740810:three_prime_UTR 40.0%
TGAATTCCAGCACCATTGTT+TGG - chr5_1:60022815-60022834 None:intergenic 40.0%
TCTTCACATTTAACCCGCAA+TGG - chr5_1:60022842-60022861 None:intergenic 40.0%
CGGGTTAAATGTGAAGATCA+AGG + chr5_1:60022845-60022864 Msa0740810:three_prime_UTR 40.0%
! GTAGGAGTGCAATATTGGAA+TGG + chr5_1:60022989-60023008 Msa0740810:intron 40.0%
TCATCTATTGAGGTTGTCAG+TGG + chr5_1:60023047-60023066 Msa0740810:three_prime_UTR 40.0%
TGTGTTGTGTTACAGATCTG+AGG + chr5_1:60023173-60023192 Msa0740810:three_prime_UTR 40.0%
TTGATTCCACGCTATCAGTG+TGG - chr5_1:60013177-60013196 None:intergenic 45.0%
TTCACAACATGCTGACAACC+AGG + chr5_1:60013312-60013331 Msa0740810:CDS 45.0%
TGCATGTGATGTTACTGACC+TGG - chr5_1:60013333-60013352 None:intergenic 45.0%
TGTTGCACATCTAGACTCTC+CGG - chr5_1:60013482-60013501 None:intergenic 45.0%
TGCCGTCCAACCAAATATCT+TGG + chr5_1:60013597-60013616 Msa0740810:CDS 45.0%
! TTCGAATCTGAGACCTAGAG+AGG - chr5_1:60014042-60014061 None:intergenic 45.0%
ACATGAATTGTTGGCACCTG+GGG - chr5_1:60014067-60014086 None:intergenic 45.0%
CACATGAATTGTTGGCACCT+GGG - chr5_1:60014068-60014087 None:intergenic 45.0%
ACACATGAATTGTTGGCACC+TGG - chr5_1:60014069-60014088 None:intergenic 45.0%
GGTGCCAACAATTCATGTGT+TGG + chr5_1:60014069-60014088 Msa0740810:intron 45.0%
GGACTGACTAATCTCAGAAC+TGG - chr5_1:60014096-60014115 None:intergenic 45.0%
CAAGTTTGTCATGCCAGGTT+AGG + chr5_1:60014508-60014527 Msa0740810:intron 45.0%
TCAGTAGACGACTTCTTCAG+TGG + chr5_1:60014694-60014713 Msa0740810:CDS 45.0%
GAAGGCAAAGAACTCTTGCA+TGG + chr5_1:60014813-60014832 Msa0740810:CDS 45.0%
! CATGGATTATGGCTTCCATG+TGG + chr5_1:60014831-60014850 Msa0740810:CDS 45.0%
TCCATGTGGCAGTTACCAAA+TGG + chr5_1:60014845-60014864 Msa0740810:CDS 45.0%
CCATGTGGCAGTTACCAAAT+GGG + chr5_1:60014846-60014865 Msa0740810:CDS 45.0%
TCAGGACAACAACCCTAGTT+TGG - chr5_1:60015226-60015245 None:intergenic 45.0%
! CTGCATCTCCATTTTCTGCA+TGG - chr5_1:60015435-60015454 None:intergenic 45.0%
AATGGAGATGCAGTGTATGC+AGG + chr5_1:60015442-60015461 Msa0740810:CDS 45.0%
ATGGAGATGCAGTGTATGCA+GGG + chr5_1:60015443-60015462 Msa0740810:CDS 45.0%
CTTGGAATAACAGGTCCTGA+AGG + chr5_1:60015484-60015503 Msa0740810:CDS 45.0%
GTTGGCATGGGATCTTAGAT+TGG + chr5_1:60015569-60015588 Msa0740810:intron 45.0%
ACCTATGTAGTTGGAAGGAG+AGG + chr5_1:60015641-60015660 Msa0740810:intron 45.0%
TGGAAGAAATTGCGAAGGCT+CGG + chr5_1:60015742-60015761 Msa0740810:CDS 45.0%
!! TGTGTCGGTTCTCATGTTTC+AGG + chr5_1:60016046-60016065 Msa0740810:intron 45.0%
ATCTCATGAGCCCTCCTATT+AGG + chr5_1:60016070-60016089 Msa0740810:CDS 45.0%
AGCCCTCCTATTAGGAGTAA+AGG + chr5_1:60016078-60016097 Msa0740810:CDS 45.0%
TGTTGCAAGGGCAGATTGAA+GGG - chr5_1:60016115-60016134 None:intergenic 45.0%
CTGCAAAACTCCTGTTGCAA+GGG - chr5_1:60016127-60016146 None:intergenic 45.0%
ATGGCAACAACAGACTTGGA+AGG - chr5_1:60016283-60016302 None:intergenic 45.0%
TTCCAAGTCTGTTGTTGCCA+TGG + chr5_1:60016282-60016301 Msa0740810:intron 45.0%
ATCCATGGCAACAACAGACT+TGG - chr5_1:60016287-60016306 None:intergenic 45.0%
ATCAACTCCACGAGCTTTCT+GGG - chr5_1:60016418-60016437 None:intergenic 45.0%
ATCTGGTCAAATGTCGGTCA+CGG + chr5_1:60016729-60016748 Msa0740810:intron 45.0%
!! TCAGAGTGACAAGCACTGAA+TGG + chr5_1:60016758-60016777 Msa0740810:intron 45.0%
AAGGAAGGGAGCTATACTTC+CGG + chr5_1:60016945-60016964 Msa0740810:intron 45.0%
CATTTGTGTCCAATCTGGAG+TGG - chr5_1:60017035-60017054 None:intergenic 45.0%
TTACGAGGGATGGAAAGGAA+AGG + chr5_1:60017056-60017075 Msa0740810:intron 45.0%
CACATTGAAATGTCGGTCAG+TGG + chr5_1:60017233-60017252 Msa0740810:intron 45.0%
TAGCAGGAGGAAGAGTTGTT+TGG + chr5_1:60017447-60017466 Msa0740810:CDS 45.0%
AGCAGGAGGAAGAGTTGTTT+GGG + chr5_1:60017448-60017467 Msa0740810:CDS 45.0%
CTGAAAGTTGTTCCTGGTAC+TGG + chr5_1:60017482-60017501 Msa0740810:CDS 45.0%
TGTATGTATCTCCCAGTACC+AGG - chr5_1:60017497-60017516 None:intergenic 45.0%
TCTCATGACTATGCAAGCCT+TGG - chr5_1:60018262-60018281 None:intergenic 45.0%
GGGATTAAAATCCTCTCGAG+TGG - chr5_1:60018998-60019017 None:intergenic 45.0%
ACTCACATAAGTGGAGGAGT+CGG - chr5_1:60019341-60019360 None:intergenic 45.0%
TCAACTTTGGCCACCAACAT+CGG - chr5_1:60019543-60019562 None:intergenic 45.0%
!! ATGTTGGTGGCCAAAGTTGA+TGG + chr5_1:60019543-60019562 Msa0740810:intron 45.0%
!!! GTGATACCTTTTTCAGCAGC+AGG - chr5_1:60020010-60020029 None:intergenic 45.0%
GTGCTCTACCACATGCATTA+AGG - chr5_1:60020230-60020249 None:intergenic 45.0%
GAGCACTAAGTTAGACTCTG+AGG + chr5_1:60020244-60020263 Msa0740810:intron 45.0%
! TCTGAGGTAGAGCACTTTGT+TGG + chr5_1:60020260-60020279 Msa0740810:intron 45.0%
! CTGAGGTAGAGCACTTTGTT+GGG + chr5_1:60020261-60020280 Msa0740810:intron 45.0%
GCACTTTGTTGGGAGAGTTA+AGG + chr5_1:60020271-60020290 Msa0740810:intron 45.0%
TATCCGAATCAGTGCCTCAT+AGG - chr5_1:60020297-60020316 None:intergenic 45.0%
!! ATGAGGCACTGATTCGGATA+CGG + chr5_1:60020297-60020316 Msa0740810:intron 45.0%
TCATGTGTCATGTGTCGTGT+TGG + chr5_1:60020381-60020400 Msa0740810:intron 45.0%
!! CAAAAGTATCGGTGCTACGA+AGG + chr5_1:60020447-60020466 Msa0740810:intron 45.0%
TACGAAGGTTAAGACTGCCT+TGG + chr5_1:60020462-60020481 Msa0740810:intron 45.0%
!! TTGCAGTAGCATTGATGGTG+TGG + chr5_1:60020531-60020550 Msa0740810:intron 45.0%
GACCAGCCCTACAAAGAAAA+TGG + chr5_1:60021230-60021249 Msa0740810:three_prime_UTR 45.0%
! GTCCATTTTCTTTGTAGGGC+TGG - chr5_1:60021235-60021254 None:intergenic 45.0%
! TCAATGATGATGCAGGAGTG+AGG + chr5_1:60021280-60021299 Msa0740810:three_prime_UTR 45.0%
! TGGAAAAGAAGGTGATGGCA+AGG + chr5_1:60021410-60021429 Msa0740810:three_prime_UTR 45.0%
!! CGAGGGAGCACAATTCATTT+TGG - chr5_1:60022327-60022346 None:intergenic 45.0%
TATCTGTGTGTTCACGAGAG+AGG + chr5_1:60022516-60022535 Msa0740810:three_prime_UTR 45.0%
ATCTGTGTGTTCACGAGAGA+GGG + chr5_1:60022517-60022536 Msa0740810:three_prime_UTR 45.0%
GAGAGAATTGAAGCCACAGA+TGG + chr5_1:60022628-60022647 Msa0740810:three_prime_UTR 45.0%
AATTGAAGCCACAGATGGAC+AGG + chr5_1:60022633-60022652 Msa0740810:three_prime_UTR 45.0%
TTGTCAAACCTGTCCATCTG+TGG - chr5_1:60022644-60022663 None:intergenic 45.0%
CTGGAATTCACAGTCCATTG+CGG + chr5_1:60022825-60022844 Msa0740810:three_prime_UTR 45.0%
TGGAATTCACAGTCCATTGC+GGG + chr5_1:60022826-60022845 Msa0740810:three_prime_UTR 45.0%
CTGTCTGTCATTACTTCGCT+TGG - chr5_1:60022878-60022897 None:intergenic 45.0%
CAAGCGAAGTAATGACAGAC+AGG + chr5_1:60022876-60022895 Msa0740810:three_prime_UTR 45.0%
TCTATTGAGGTTGTCAGTGG+TGG + chr5_1:60023050-60023069 Msa0740810:three_prime_UTR 45.0%
!! TTAAAAAAAAAAAGAATAAA+CGG + chr5_1:60018570-60018589 Msa0740810:intron 5.0%
!! AATTATTATTAAATTTACAA+CGG + chr5_1:60019241-60019260 Msa0740810:intron 5.0%
!!! ATTTTAATAATTACATTTTT+GGG - chr5_1:60019747-60019766 None:intergenic 5.0%
!!! AATTTTAATAATTACATTTT+TGG - chr5_1:60019748-60019767 None:intergenic 5.0%
!! AAAAATGTAATTATTAAAAT+TGG + chr5_1:60019747-60019766 Msa0740810:intron 5.0%
!! AAAATGTAATTATTAAAATT+GGG + chr5_1:60019748-60019767 Msa0740810:intron 5.0%
! TCTCAACCACACTGATAGCG+TGG + chr5_1:60013168-60013187 Msa0740810:CDS 50.0%
GTCTCAGATTCGAAATCCCC+AGG + chr5_1:60014048-60014067 Msa0740810:intron 50.0%
!! TGGCATGACAAACTTGCTGG+TGG - chr5_1:60014504-60014523 None:intergenic 50.0%
ACCAGCAAGTTTGTCATGCC+AGG + chr5_1:60014503-60014522 Msa0740810:CDS 50.0%
ACCTGGCATGACAAACTTGC+TGG - chr5_1:60014507-60014526 None:intergenic 50.0%
ATTGATCCTCACGCACACCT+AGG + chr5_1:60014649-60014668 Msa0740810:CDS 50.0%
TTGATCCTCACGCACACCTA+GGG + chr5_1:60014650-60014669 Msa0740810:CDS 50.0%
! CCCATTTGGTAACTGCCACA+TGG - chr5_1:60014849-60014868 None:intergenic 50.0%
ATAAGTGGCAGGTTGCACGA+GGG + chr5_1:60015038-60015057 Msa0740810:intron 50.0%
AACGATGAGCTTCTCCTGCA+AGG + chr5_1:60015370-60015389 Msa0740810:CDS 50.0%
GCGATGGTCCATGCAGAAAA+TGG + chr5_1:60015424-60015443 Msa0740810:CDS 50.0%
CTTGAAAGAGGATGCCCTTC+AGG - chr5_1:60015502-60015521 None:intergenic 50.0%
!! CTGAAGGGCATCCTCTTTCA+AGG + chr5_1:60015500-60015519 Msa0740810:CDS 50.0%
TCCTCTTTCAAGGCCTCCAA+TGG + chr5_1:60015510-60015529 Msa0740810:CDS 50.0%
ACCATTGGAGGCCTTGAAAG+AGG - chr5_1:60015514-60015533 None:intergenic 50.0%
GCCTCTCCTTCCAACTACAT+AGG - chr5_1:60015645-60015664 None:intergenic 50.0%
ATTGCGAAGGCTCGGAAATC+AGG + chr5_1:60015750-60015769 Msa0740810:CDS 50.0%
ATCGGAGAACCTGTTGTCTC+TGG + chr5_1:60015899-60015918 Msa0740810:CDS 50.0%
TCGGAGAACCTGTTGTCTCT+GGG + chr5_1:60015900-60015919 Msa0740810:CDS 50.0%
CCAAAGCCAAGAGTCGTCAA+GGG - chr5_1:60015930-60015949 None:intergenic 50.0%
CTGTTGCAAGGGCAGATTGA+AGG - chr5_1:60016116-60016135 None:intergenic 50.0%
CTTCAATCTGCCCTTGCAAC+AGG + chr5_1:60016114-60016133 Msa0740810:CDS 50.0%
CCTGCAAAACTCCTGTTGCA+AGG - chr5_1:60016128-60016147 None:intergenic 50.0%
! CCTTGCAACAGGAGTTTTGC+AGG + chr5_1:60016125-60016144 Msa0740810:CDS 50.0%
TAGGAACTGATCACTGTGCC+TGG + chr5_1:60016385-60016404 Msa0740810:CDS 50.0%
AGCTTTCTGGGTGGAATTCC+AGG - chr5_1:60016406-60016425 None:intergenic 50.0%
AATTCCACCCAGAAAGCTCG+TGG + chr5_1:60016408-60016427 Msa0740810:CDS 50.0%
CATCAACTCCACGAGCTTTC+TGG - chr5_1:60016419-60016438 None:intergenic 50.0%
AAGAAAGGATGCACGTGGTC+TGG + chr5_1:60016574-60016593 Msa0740810:CDS 50.0%
AGAAAGGATGCACGTGGTCT+GGG + chr5_1:60016575-60016594 Msa0740810:CDS 50.0%
TCTCTCTCTCTCTCTCTCTC+AGG + chr5_1:60013353-60013372 Msa0740810:intron 50.0%
CTCTCTCTCTCTCAGGAATC+TGG + chr5_1:60016712-60016731 Msa0740810:intron 50.0%
! GGAAGTATAGCTCCCTTCCT+TGG - chr5_1:60016946-60016965 None:intergenic 50.0%
AGGAAGGGAGCTATACTTCC+GGG + chr5_1:60016946-60016965 Msa0740810:intron 50.0%
ATAATATCTGCGTCGGACCC+CGG - chr5_1:60016967-60016986 None:intergenic 50.0%
! GTTGTTGGTGTCCTATGTCG+AGG + chr5_1:60017304-60017323 Msa0740810:intron 50.0%
TGTCATCGGTAGAGAGGTTG+CGG - chr5_1:60017932-60017951 None:intergenic 50.0%
TGATGCTGTCATCGGTAGAG+AGG - chr5_1:60017938-60017957 None:intergenic 50.0%
GACCAAGTCAACACCGATGT+TGG + chr5_1:60019527-60019546 Msa0740810:intron 50.0%
!! CACCAACATCGGTGTTGACT+TGG - chr5_1:60019532-60019551 None:intergenic 50.0%
CAAGTCAACACCGATGTTGG+TGG + chr5_1:60019530-60019549 Msa0740810:intron 50.0%
TGGGAGAGTTAAGGCCTATG+AGG + chr5_1:60020280-60020299 Msa0740810:intron 50.0%
!! AGGCCTATGAGGCACTGATT+CGG + chr5_1:60020291-60020310 Msa0740810:intron 50.0%
TACGGACACAACACTGACAC+TGG + chr5_1:60020315-60020334 Msa0740810:intron 50.0%
TGTCAGACACTGACACGTGT+CGG + chr5_1:60020404-60020423 Msa0740810:intron 50.0%
AGCATGTTGGAAGCCTGCAA+CGG + chr5_1:60020924-60020943 Msa0740810:three_prime_UTR 50.0%
!! GGGGGTGTCTTTAACGTACA+CGG - chr5_1:60021114-60021133 None:intergenic 50.0%
GTCTGTCACAATACCCACAG+GGG - chr5_1:60021754-60021773 None:intergenic 50.0%
GGTCTGTCACAATACCCACA+GGG - chr5_1:60021755-60021774 None:intergenic 50.0%
TGGTCTGTCACAATACCCAC+AGG - chr5_1:60021756-60021775 None:intergenic 50.0%
TCTTCCCTACAACACGCCAT+AGG + chr5_1:60021808-60021827 Msa0740810:three_prime_UTR 50.0%
ACCACCTATGGCGTGTTGTA+GGG - chr5_1:60021815-60021834 None:intergenic 50.0%
CACGCCATAGGTGGTGTTTA+TGG + chr5_1:60021820-60021839 Msa0740810:three_prime_UTR 50.0%
AGGATCAAGTCTGCGATGGA+AGG + chr5_1:60021894-60021913 Msa0740810:three_prime_UTR 50.0%
TGGCATGAGTGTACTCACCT+TGG - chr5_1:60022274-60022293 None:intergenic 50.0%
TCCCTCGTTGAATGTTGTCG+AGG + chr5_1:60022340-60022359 Msa0740810:three_prime_UTR 50.0%
CCCTCGACAACATTCAACGA+GGG - chr5_1:60022344-60022363 None:intergenic 50.0%
CCCTCGTTGAATGTTGTCGA+GGG + chr5_1:60022341-60022360 Msa0740810:three_prime_UTR 50.0%
ACCCTCGACAACATTCAACG+AGG - chr5_1:60022345-60022364 None:intergenic 50.0%
GTGTTGGAGGAGGTTGTAGT+TGG + chr5_1:60022383-60022402 Msa0740810:three_prime_UTR 50.0%
TTGGAGGAGGTTGTAGTTGG+AGG + chr5_1:60022386-60022405 Msa0740810:three_prime_UTR 50.0%
ATTGAGGTTGTCAGTGGTGG+TGG + chr5_1:60023053-60023072 Msa0740810:three_prime_UTR 50.0%
!! TGTCAGTGGTGGTGGTTTGT+TGG + chr5_1:60023061-60023080 Msa0740810:three_prime_UTR 50.0%
ACACCTAGGGATGGATGCGT+TGG + chr5_1:60014663-60014682 Msa0740810:CDS 55.0%
CACCTAGGGATGGATGCGTT+GGG + chr5_1:60014664-60014683 Msa0740810:CDS 55.0%
TACCCAACGCATCCATCCCT+AGG - chr5_1:60014669-60014688 None:intergenic 55.0%
GGTCAGTCTGCAGCATTAGC+TGG + chr5_1:60014715-60014734 Msa0740810:CDS 55.0%
CAGTCTGCAGCATTAGCTGG+TGG + chr5_1:60014718-60014737 Msa0740810:CDS 55.0%
GATAAGTGGCAGGTTGCACG+AGG + chr5_1:60015037-60015056 Msa0740810:intron 55.0%
TAAGTGGCAGGTTGCACGAG+GGG + chr5_1:60015039-60015058 Msa0740810:intron 55.0%
!! GTGCAAGTCTCTTGGTGCCT+TGG + chr5_1:60015402-60015421 Msa0740810:CDS 55.0%
TTCTGCATGGACCATCGCCA+AGG - chr5_1:60015422-60015441 None:intergenic 55.0%
AGGGCTAACCCAGAGACAAC+AGG - chr5_1:60015911-60015930 None:intergenic 55.0%
! GGTTAGCCCTTGACGACTCT+TGG + chr5_1:60015921-60015940 Msa0740810:intron 55.0%
CCCTTGACGACTCTTGGCTT+TGG + chr5_1:60015927-60015946 Msa0740810:intron 55.0%
GCCAAAGCCAAGAGTCGTCA+AGG - chr5_1:60015931-60015950 None:intergenic 55.0%
AACTCCACGAGCTTTCTGGG+TGG - chr5_1:60016415-60016434 None:intergenic 55.0%
! GCACGTGGTCTGGGACATAA+TGG + chr5_1:60016584-60016603 Msa0740810:CDS 55.0%
! CGTGGTCTGGGACATAATGG+TGG + chr5_1:60016587-60016606 Msa0740810:CDS 55.0%
GGAAGGGAGCTATACTTCCG+GGG + chr5_1:60016947-60016966 Msa0740810:intron 55.0%
! TTTTCAGCAGCAGGGCGAAG+TGG - chr5_1:60020001-60020020 None:intergenic 55.0%
CTTCGCCCTGCTGCTGAAAA+AGG + chr5_1:60020001-60020020 Msa0740810:intron 55.0%
GTCAGACACTGACACGTGTC+GGG + chr5_1:60020405-60020424 Msa0740810:intron 55.0%
GCATGTTGGAAGCCTGCAAC+GGG + chr5_1:60020925-60020944 Msa0740810:three_prime_UTR 55.0%
CATGTTGGAAGCCTGCAACG+GGG + chr5_1:60020926-60020945 Msa0740810:three_prime_UTR 55.0%
GAAAAACGCATCCCCGTTGC+AGG - chr5_1:60020940-60020959 None:intergenic 55.0%
TGCACAAGAGAGGGGTCTCA+AGG + chr5_1:60021078-60021097 Msa0740810:three_prime_UTR 55.0%
GCACAAGAGAGGGGTCTCAA+GGG + chr5_1:60021079-60021098 Msa0740810:three_prime_UTR 55.0%
TATGCTTGGAAAGGCCCCTG+TGG + chr5_1:60021737-60021756 Msa0740810:three_prime_UTR 55.0%
ATGCTTGGAAAGGCCCCTGT+GGG + chr5_1:60021738-60021757 Msa0740810:three_prime_UTR 55.0%
TCCCTACAACACGCCATAGG+TGG + chr5_1:60021811-60021830 Msa0740810:three_prime_UTR 55.0%
CACCACCTATGGCGTGTTGT+AGG - chr5_1:60021816-60021835 None:intergenic 55.0%
TCCTCACGCACACCTAGGGA+TGG + chr5_1:60014654-60014673 Msa0740810:CDS 60.0%
TCCATCCCTAGGTGTGCGTG+AGG - chr5_1:60014658-60014677 None:intergenic 60.0%
!! GTCTCTTGGTGCCTTGGCGA+TGG + chr5_1:60015408-60015427 Msa0740810:CDS 60.0%
! CTTGGATGTGGGCTGCTCTC+AGG + chr5_1:60021666-60021685 Msa0740810:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 60013097 60023359 60013097 ID=Msa0740810;Name=Msa0740810
chr5_1 mRNA 60013097 60023359 60013097 ID=Msa0740810-mRNA-1;Parent=Msa0740810;Name=Msa0740810-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.6|0.56|0.93|0.6|0.56|16|2436|510
chr5_1 exon 60013097 60013105 60013097 ID=Msa0740810-mRNA-1:exon:17320;Parent=Msa0740810-mRNA-1
chr5_1 exon 60013157 60013333 60013157 ID=Msa0740810-mRNA-1:exon:17321;Parent=Msa0740810-mRNA-1
chr5_1 exon 60013457 60013618 60013457 ID=Msa0740810-mRNA-1:exon:17322;Parent=Msa0740810-mRNA-1
chr5_1 exon 60014473 60014524 60014473 ID=Msa0740810-mRNA-1:exon:17323;Parent=Msa0740810-mRNA-1
chr5_1 exon 60014644 60014793 60014644 ID=Msa0740810-mRNA-1:exon:17324;Parent=Msa0740810-mRNA-1
chr5_1 exon 60014803 60014913 60014803 ID=Msa0740810-mRNA-1:exon:17325;Parent=Msa0740810-mRNA-1
chr5_1 exon 60015320 60015531 60015320 ID=Msa0740810-mRNA-1:exon:17326;Parent=Msa0740810-mRNA-1
chr5_1 exon 60015651 60015771 60015651 ID=Msa0740810-mRNA-1:exon:17327;Parent=Msa0740810-mRNA-1
chr5_1 exon 60015888 60015921 60015888 ID=Msa0740810-mRNA-1:exon:17328;Parent=Msa0740810-mRNA-1
chr5_1 exon 60016068 60016146 60016068 ID=Msa0740810-mRNA-1:exon:17329;Parent=Msa0740810-mRNA-1
chr5_1 exon 60016381 60016468 60016381 ID=Msa0740810-mRNA-1:exon:17330;Parent=Msa0740810-mRNA-1
chr5_1 exon 60016568 60016608 60016568 ID=Msa0740810-mRNA-1:exon:17331;Parent=Msa0740810-mRNA-1
chr5_1 exon 60016952 60017053 60016952 ID=Msa0740810-mRNA-1:exon:17332;Parent=Msa0740810-mRNA-1
chr5_1 exon 60017428 60017592 60017428 ID=Msa0740810-mRNA-1:exon:17333;Parent=Msa0740810-mRNA-1
chr5_1 exon 60020808 60022906 60020808 ID=Msa0740810-mRNA-1:exon:17334;Parent=Msa0740810-mRNA-1
chr5_1 exon 60022993 60023359 60022993 ID=Msa0740810-mRNA-1:exon:17335;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60013097 60013105 60013097 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60013157 60013333 60013157 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60013457 60013618 60013457 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60014473 60014524 60014473 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60014644 60014793 60014644 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60014803 60014913 60014803 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60015320 60015531 60015320 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60015651 60015771 60015651 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60015888 60015921 60015888 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60016068 60016146 60016068 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60016381 60016468 60016381 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60016568 60016608 60016568 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60016952 60017053 60016952 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60017428 60017592 60017428 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 CDS 60020808 60020837 60020808 ID=Msa0740810-mRNA-1:cds;Parent=Msa0740810-mRNA-1
chr5_1 three_prime_UTR 60020838 60022906 60020838 ID=Msa0740810-mRNA-1:three_prime_utr;Parent=Msa0740810-mRNA-1
chr5_1 three_prime_UTR 60022993 60023359 60022993 ID=Msa0740810-mRNA-1:three_prime_utr;Parent=Msa0740810-mRNA-1
Gene Sequence

>Msa0740810

ATGGAGGAAAATATAACAGTTCTCAACCACACTGATAGCGTGGAATCAAAATATCTAAATATAGAAACAAACTCCCGAAGTTGTGTATGTACTGTAGTGATGATGATGAGCTTCAGTTTTCAACTCCTTCTTCCTCTTTTCTTCTTTCTTATCACAACTTCACTTTCACAACATGCTGACAACCAGTTTTGTGAAGCTGGAATTGAATCCGGAGAGTCTAGATGTGCAACATCATCATCCAACAAGTTGTTGATCAAAGGTGGTACTGTTGTCAATGCTCATCACCAACATGTTGCTGATGTATATGTTGAAGATGGCATCATTGTTGCCGTCCAACCAAATATCTTGGTTGGAGATGATGTGTATGTGATAGATGCCACCAGCAAGTTTGTCATGCCAGGAGGCATTGATCCTCACGCACACCTAGGGATGGATGCGTTGGGTACTACATCAGTAGACGACTTCTTCAGTGGTCAGTCTGCAGCATTAGCTGGTGGAACAACGATGCACATTGACTTCGTTATGCCAGTTAATGGGAATTTAACAGCTGCCTATGAAAAGAAGGCAAAGAACTCTTGCATGGATTATGGCTTCCATGTGGCAGTTACCAAATGGGATGAATCTGTTTCGACAGATATGGAGATCATGGTTAAGGAGAAAGGTATCAACTCTTTCAAGTTTTTCATGGCATACAAAGAATTTATTATGGTCAACGATGAGCTTCTCCTGCAAGGATTTAAGAAGTGCAAGTCTCTTGGTGCCTTGGCGATGGTCCATGCAGAAAATGGAGATGCAGTGTATGCAGGGCAACAGAAAATGATAGAACTTGGAATAACAGGTCCTGAAGGGCATCCTCTTTCAAGGCCTCCAATGTTGGAAGGAGAGGCAACTTCTCGTGCTATTCGCTTAGCAGATTTTGTGAACACTCCATTATATGTGGTTCATGTAATGAGCATTGATGCAATGGAAGAAATTGCGAAGGCTCGGAAATCAGGACAAAGGGTAATCGGAGAACCTGTTGTCTCTGGGTATCTCATGAGCCCTCCTATTAGGAGTAAAGGACATGATAAGGCCCTTCAATCTGCCCTTGCAACAGGAGTTTTGCAGCTGGTAGGAACTGATCACTGTGCCTGGAATTCCACCCAGAAAGCTCGTGGAGTTGATGACTTCCGCCAAATTATAAATGGTGTCAATGGTATTGAAGAAAGGATGCACGTGGTCTGGGACATAATGGTGGGAGCTATACTTCCGGGGTCCGACGCAGATATTATCATCCTGAATCCTAACTCAAGTTTTGAGATAACTGCAAAATCTCACCACTCCAGATTGGACACAAATGGGAAAATTGAAGTGACTATAGCAGGAGGAAGAGTTGTTTGGGAAAATAATGAACTGAAAGTTGTTCCTGGTACTGGGAGATACATACAGATGCCTCCTTTTAGTTATCTGTTTGATGGATTGGACAAAAAGGATGCTGTTTATCTAAGTTCCCTTAAAGCCCCATTTTGGTTTGGCACTTTCACCTTTAATTGA
Protein sequence

>Msa0740810

MEENITVLNHTDSVESKYLNIETNSRSCVCTVVMMMSFSFQLLLPLFFFLITTSLSQHADNQFCEAGIESGESRCATSSSNKLLIKGGTVVNAHHQHVADVYVEDGIIVAVQPNILVGDDVYVIDATSKFVMPGGIDPHAHLGMDALGTTSVDDFFSGQSAALAGGTTMHIDFVMPVNGNLTAAYEKKAKNSCMDYGFHVAVTKWDESVSTDMEIMVKEKGINSFKFFMAYKEFIMVNDELLLQGFKKCKSLGALAMVHAENGDAVYAGQQKMIELGITGPEGHPLSRPPMLEGEATSRAIRLADFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPVVSGYLMSPPIRSKGHDKALQSALATGVLQLVGTDHCAWNSTQKARGVDDFRQIINGVNGIEERMHVVWDIMVGAILPGSDADIIILNPNSSFEITAKSHHSRLDTNGKIEVTIAGGRVVWENNELKVVPGTGRYIQMPPFSYLFDGLDKKDAVYLSSLKAPFWFGTFTFN*