Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774480 | sp|Q96EX2|RNFT2_HUMAN | 29.321 | 324 | 208 | 7 | 147 | 458 | 130 | 444 | 6.04e-41 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774480 | G7KDC0 | 93.971 | 481 | 6 | 2 | 1 | 458 | 1 | 481 | 0.0 | 921 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0774480 | Msa0852280 | 0.945089 | 5.854968e-104 | -8.615850e-47 |
| Msa0475040 | Msa0774480 | 0.802989 | 4.316811e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774480 | MtrunA17_Chr5g0428621 | 93.971 | 481 | 6 | 2 | 1 | 458 | 1 | 481 | 0.0 | 921 |
| Msa0774480 | MtrunA17_Chr7g0245321 | 63.426 | 432 | 128 | 6 | 38 | 458 | 14 | 426 | 0.0 | 518 |
| Msa0774480 | MtrunA17_Chr3g0128531 | 69.085 | 317 | 92 | 3 | 142 | 457 | 41 | 352 | 1.04e-153 | 440 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774480 | AT5G01960.1 | 64.775 | 423 | 119 | 9 | 45 | 458 | 25 | 426 | 0.0 | 542 |
Find 125 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTAACCCAACACCTTTC+TGG | 0.136413 | 5_2:+50731233 | Msa0774480:CDS |
| TATACAAACTTCAAAGAAAT+TGG | 0.149391 | 5_2:-50737441 | None:intergenic |
| AACTCATGATGTACAAATTA+AGG | 0.154216 | 5_2:+50737304 | Msa0774480:three_prime_UTR |
| GATGCTGGTGGTGCTGTTGC+TGG | 0.216559 | 5_2:+50729618 | Msa0774480:CDS |
| CCTTCTTATATATTACAAAA+AGG | 0.220636 | 5_2:+50732984 | Msa0774480:CDS |
| CAGGTTTCTTTGTCACAATT+TGG | 0.224870 | 5_2:+50730920 | Msa0774480:intron |
| AAACGAAATCGGTGACAAAA+AGG | 0.259302 | 5_2:-50729499 | None:intergenic |
| GAAGTTGCAATAAGGATTAT+TGG | 0.287712 | 5_2:+50729654 | Msa0774480:CDS |
| TTCATGTGATATGCATTTAC+TGG | 0.295179 | 5_2:+50731167 | Msa0774480:CDS |
| GCATCGTCATCATCATCTTT+TGG | 0.299559 | 5_2:+50729411 | Msa0774480:CDS |
| TGTTTGCAGCGCAACAAGAT+AGG | 0.343260 | 5_2:-50734658 | None:intergenic |
| GGAATGGAACAGAAAATAAC+AGG | 0.357993 | 5_2:+50729889 | Msa0774480:CDS |
| CTTTCTTGATAATGCTTTCA+AGG | 0.360532 | 5_2:-50733394 | None:intergenic |
| GATTGTGGTGAGGAGCTTAT+TGG | 0.382139 | 5_2:+50729723 | Msa0774480:CDS |
| GCTGTTGCTGGGAGTAGTGC+AGG | 0.386572 | 5_2:+50729630 | Msa0774480:CDS |
| TGTGTTAAAGATGGAAACTT+TGG | 0.389515 | 5_2:+50729353 | None:intergenic |
| CGGAGAGAATATTCATAATC+AGG | 0.390914 | 5_2:+50729680 | Msa0774480:CDS |
| ACTCATGATGTACAAATTAA+GGG | 0.395875 | 5_2:+50737305 | Msa0774480:three_prime_UTR |
| TCAAGAAAGGAAGTTCATTA+CGG | 0.399518 | 5_2:+50733408 | Msa0774480:CDS |
| CAGGTTGATGGTGAGGCTGC+TGG | 0.403813 | 5_2:+50729867 | Msa0774480:intron |
| AGAATATTCATAATCAGGTT+GGG | 0.404440 | 5_2:+50729685 | Msa0774480:CDS |
| CAAGAAAGGAAGTTCATTAC+GGG | 0.406319 | 5_2:+50733409 | Msa0774480:CDS |
| TAAGAAGCAGACAGCTTTGA+AGG | 0.417319 | 5_2:+50730978 | Msa0774480:CDS |
| CATGAGTTGATTAAAACAAC+TGG | 0.418322 | 5_2:-50737289 | None:intergenic |
| ATGCTGGTGGTGCTGTTGCT+GGG | 0.418694 | 5_2:+50729619 | Msa0774480:CDS |
| GTGCAGGGGAAGTTGCAATA+AGG | 0.423075 | 5_2:+50729646 | Msa0774480:CDS |
| TTGCTGAGATACTCAAAATC+GGG | 0.423104 | 5_2:+50737330 | Msa0774480:three_prime_UTR |
| CATAATCAGGTTGGGGAAGT+AGG | 0.423930 | 5_2:+50729693 | Msa0774480:CDS |
| AGGAAAGTCTCTTTACTTGC+TGG | 0.427377 | 5_2:+50731124 | Msa0774480:CDS |
| GCATGCAATATTCACGATCT+TGG | 0.434284 | 5_2:+50731255 | Msa0774480:CDS |
| TATTCAGGTTTGAGAGAGAA+AGG | 0.435355 | 5_2:+50737189 | Msa0774480:intron |
| GGTCTATGCCACAGCAGAAC+AGG | 0.437050 | 5_2:+50733431 | Msa0774480:CDS |
| ATACAAACTTCAAAGAAATT+GGG | 0.447841 | 5_2:-50737440 | None:intergenic |
| GCTGGTAGTGGACAGGTTGA+TGG | 0.451925 | 5_2:+50729855 | Msa0774480:intron |
| TTTGCTGAGATACTCAAAAT+CGG | 0.452012 | 5_2:+50737329 | Msa0774480:three_prime_UTR |
| GAGAATGATGCCGAGGGTCG+TGG | 0.454511 | 5_2:+50729774 | Msa0774480:CDS |
| GATGGTGAGGCTGCTGGGAA+TGG | 0.455118 | 5_2:+50729873 | Msa0774480:CDS |
| ACCAACAACAAAAGCGAGAA+AGG | 0.457541 | 5_2:-50729975 | None:intergenic |
| GCAGCTGATCTTCGCACCTT+CGG | 0.460469 | 5_2:+50737242 | Msa0774480:CDS |
| TGCCAGAAAGGTGTTGGGTT+AGG | 0.468923 | 5_2:-50731235 | None:intergenic |
| TTCATTCGACAGCATTTACA+AGG | 0.471120 | 5_2:+50730002 | Msa0774480:CDS |
| GAGAATATTCATAATCAGGT+TGG | 0.471723 | 5_2:+50729684 | Msa0774480:CDS |
| TTTAACCAATGCTCTGCATA+GGG | 0.474317 | 5_2:-50737219 | None:intergenic |
| GTGTTAAAGATGGAAACTTT+GGG | 0.484629 | 5_2:+50729354 | None:intergenic |
| CTTGAAAGCATTATCAAGAA+AGG | 0.491166 | 5_2:+50733395 | Msa0774480:CDS |
| GATCTTCGCACCTTCGGAGA+TGG | 0.496054 | 5_2:+50737248 | Msa0774480:CDS |
| TAGGGGAATGCATCTTCTCT+TGG | 0.502312 | 5_2:-50734639 | None:intergenic |
| CTCAATTCCACCACGACCCT+CGG | 0.503303 | 5_2:-50729784 | None:intergenic |
| AATGGTGGTGTAACTTGGTA+TGG | 0.506979 | 5_2:+50729456 | Msa0774480:CDS |
| TCTATTATACGAGGAATATG+AGG | 0.507944 | 5_2:-50737365 | None:intergenic |
| AGGTTGATGGTGAGGCTGCT+GGG | 0.510435 | 5_2:+50729868 | Msa0774480:intron |
| CCTTGTTGCCAACACCAGTC+TGG | 0.511066 | 5_2:+50733163 | Msa0774480:CDS |
| CTTTAACCAATGCTCTGCAT+AGG | 0.512609 | 5_2:-50737220 | None:intergenic |
| TGCCAACACCAGTCTGGTAC+CGG | 0.512850 | 5_2:+50733169 | Msa0774480:CDS |
| ATTGCATGCCAGAAAGGTGT+TGG | 0.514467 | 5_2:-50731241 | None:intergenic |
| GTGAATATTGCATGCCAGAA+AGG | 0.515806 | 5_2:-50731247 | None:intergenic |
| ACGAGGAATATGAGGTTAGC+GGG | 0.516794 | 5_2:-50737357 | None:intergenic |
| GAGAAGTGGAATGCCTGGAT+TGG | 0.516962 | 5_2:+50729749 | Msa0774480:CDS |
| AGGTCATAATTTCCGTCGAC+AGG | 0.520503 | 5_2:+50733011 | Msa0774480:CDS |
| TTGCATGCCAGAAAGGTGTT+GGG | 0.523282 | 5_2:-50731240 | None:intergenic |
| GTTTGCAGCGCAACAAGATA+GGG | 0.523423 | 5_2:-50734657 | None:intergenic |
| GCATCATTCTCACCCAATCC+AGG | 0.524005 | 5_2:-50729762 | None:intergenic |
| ATTAATTAAGTTGTTCCACT+TGG | 0.525389 | 5_2:+50737492 | Msa0774480:three_prime_UTR |
| GAGCTTATTGGTGAGAGAAG+TGG | 0.528069 | 5_2:+50729735 | Msa0774480:CDS |
| CAGAAAGGTGTTGGGTTAGG+AGG | 0.529451 | 5_2:-50731232 | None:intergenic |
| CGAGGGTCGTGGTGGAATTG+AGG | 0.530269 | 5_2:+50729785 | Msa0774480:CDS |
| TTACGATCTCAGGTTGATGC+TGG | 0.530975 | 5_2:+50729603 | Msa0774480:intron |
| CTGATTATGAATATTCTCTC+CGG | 0.531233 | 5_2:-50729679 | None:intergenic |
| CTGTTGCTGGGAGTAGTGCA+GGG | 0.533694 | 5_2:+50729631 | Msa0774480:CDS |
| AGAAGTGGAATGCCTGGATT+GGG | 0.538975 | 5_2:+50729750 | Msa0774480:CDS |
| ATATTCACGATCTTGGTCAA+TGG | 0.547880 | 5_2:+50731262 | Msa0774480:CDS |
| CCAGACTGGTGTTGGCAACA+AGG | 0.550659 | 5_2:-50733163 | None:intergenic |
| GCTAACATCTGTGGTTGAGA+AGG | 0.553972 | 5_2:+50733260 | Msa0774480:CDS |
| AACCGGTACCAGACTGGTGT+TGG | 0.555615 | 5_2:-50733171 | None:intergenic |
| ATTGATGCGGCAAGTTGCAA+TGG | 0.559389 | 5_2:+50732948 | Msa0774480:CDS |
| GCAATAAGGATTATTGGAGC+CGG | 0.561386 | 5_2:+50729660 | Msa0774480:CDS |
| GGTGAGAGAAGTGGAATGCC+TGG | 0.561452 | 5_2:+50729744 | Msa0774480:CDS |
| ATAACAATGGTGGTGTAACT+TGG | 0.562068 | 5_2:+50729451 | Msa0774480:CDS |
| CGTTCGAGTAATGATTCTGA+GGG | 0.563268 | 5_2:+50729546 | Msa0774480:CDS |
| AACTTTCAAGCTAACATCTG+TGG | 0.566297 | 5_2:+50733251 | Msa0774480:CDS |
| GAATATTCATAATCAGGTTG+GGG | 0.568125 | 5_2:+50729686 | Msa0774480:CDS |
| TCAAGGCAGAAATAAAGCAT+TGG | 0.568202 | 5_2:-50733377 | None:intergenic |
| TAACCAATGCTCTGCATAGG+GGG | 0.573244 | 5_2:-50737217 | None:intergenic |
| GCGTTCGAGTAATGATTCTG+AGG | 0.573260 | 5_2:+50729545 | Msa0774480:CDS |
| GTGTAACTTGGTATGGAATG+AGG | 0.578063 | 5_2:+50729463 | Msa0774480:CDS |
| AAGAATCTGCTCGATCCACT+TGG | 0.579271 | 5_2:-50729952 | None:intergenic |
| TACGAGGAATATGAGGTTAG+CGG | 0.579546 | 5_2:-50737358 | None:intergenic |
| GAAACACAGGTTACTGCTGC+CGG | 0.586657 | 5_2:+50734598 | Msa0774480:intron |
| TCAGAGATATGATATTCAGC+TGG | 0.589785 | 5_2:+50729926 | Msa0774480:CDS |
| GTGGAATTGAGGCTAGTGAA+GGG | 0.589870 | 5_2:+50729796 | Msa0774480:CDS |
| TGCTGAGATACTCAAAATCG+GGG | 0.592550 | 5_2:+50737331 | Msa0774480:three_prime_UTR |
| GCATATAGCACATAGGTCAC+CGG | 0.609774 | 5_2:-50734617 | None:intergenic |
| AATTATTACCTGTTCTGCTG+TGG | 0.619122 | 5_2:-50733439 | None:intergenic |
| CGATCTCAGGTTGATGCTGG+TGG | 0.621120 | 5_2:+50729606 | Msa0774480:intron |
| GGTGGAATTGAGGCTAGTGA+AGG | 0.624331 | 5_2:+50729795 | Msa0774480:CDS |
| TCTCTTGGCATATAGCACAT+AGG | 0.625613 | 5_2:-50734624 | None:intergenic |
| GACTATCAGATATATTGATG+CGG | 0.630026 | 5_2:+50732935 | Msa0774480:intron |
| ACTTGTTGATCCATCTCCGA+AGG | 0.630497 | 5_2:-50737258 | None:intergenic |
| TAGTGGACAGGTTGATGGTG+AGG | 0.631621 | 5_2:+50729860 | Msa0774480:intron |
| TGTTGGGTTAGGAGGTAACA+TGG | 0.635457 | 5_2:-50731224 | None:intergenic |
| ATGTGATATGCATTTACTGG+TGG | 0.637599 | 5_2:+50731170 | Msa0774480:CDS |
| TTTGCAGCGCAACAAGATAG+GGG | 0.638343 | 5_2:-50734656 | None:intergenic |
| GACGATGCTGATGATAATGA+TGG | 0.640183 | 5_2:-50729396 | None:intergenic |
| AAGTGTTAATCACCTGTCGA+CGG | 0.651807 | 5_2:-50733023 | None:intergenic |
| TTAGGAGGTAACATGGCCAG+TGG | 0.655245 | 5_2:-50731217 | None:intergenic |
| GCAATTTCAGCACTTCCAAG+TGG | 0.655394 | 5_2:-50737507 | None:intergenic |
| ATTAATACTGATGATAACAA+TGG | 0.655907 | 5_2:+50729438 | Msa0774480:CDS |
| GCGAAGATTGTGTTTCTGAG+TGG | 0.661411 | 5_2:+50734689 | Msa0774480:CDS |
| TGGAATTGAGGCTAGTGAAG+GGG | 0.668643 | 5_2:+50729797 | Msa0774480:CDS |
| TTAACCAATGCTCTGCATAG+GGG | 0.669529 | 5_2:-50737218 | None:intergenic |
| AGGTTATGATGATTGTGGTG+AGG | 0.674430 | 5_2:+50729713 | Msa0774480:CDS |
| AATGATGCCGAGGGTCGTGG+TGG | 0.676790 | 5_2:+50729777 | Msa0774480:CDS |
| TGTTGCTGGGAGTAGTGCAG+GGG | 0.681680 | 5_2:+50729632 | Msa0774480:CDS |
| ATATTCAGCTGGTTGCCAAG+TGG | 0.681905 | 5_2:+50729937 | Msa0774480:CDS |
| TTGGGTGAGAATGATGCCGA+GGG | 0.685926 | 5_2:+50729768 | Msa0774480:CDS |
| GCTGAGATACTCAAAATCGG+GGG | 0.694163 | 5_2:+50737332 | Msa0774480:three_prime_UTR |
| ATTGGGTGAGAATGATGCCG+AGG | 0.696716 | 5_2:+50729767 | Msa0774480:CDS |
| GAAGTAGGTTATGATGATTG+TGG | 0.698058 | 5_2:+50729708 | Msa0774480:CDS |
| TTAAAGATGGAAACTTTGGG+TGG | 0.712597 | 5_2:+50729357 | None:intergenic |
| GAAAGTTAAATACAACCCTG+TGG | 0.717765 | 5_2:-50733235 | None:intergenic |
| GAATGGAACAGAAAATAACA+GGG | 0.719617 | 5_2:+50729890 | Msa0774480:CDS |
| AAGAAAGGAAGTTCATTACG+GGG | 0.731505 | 5_2:+50733410 | Msa0774480:CDS |
| ATCATACTATCTATTATACG+AGG | 0.737073 | 5_2:-50737374 | None:intergenic |
| AATACTGATGATAACAATGG+TGG | 0.742919 | 5_2:+50729441 | Msa0774480:CDS |
| GAGGGTATGATTGTCAACAA+CGG | 0.747863 | 5_2:+50729564 | Msa0774480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAGAATAGAAATTTTAA+AGG | - | chr5_2:50731028-50731047 | None:intergenic | 10.0% |
| !! | ATGAAATAGTAAATAATTAA+AGG | + | chr5_2:50735066-50735085 | Msa0774480:intron | 10.0% |
| !! | TGAAATAGTAAATAATTAAA+GGG | + | chr5_2:50735067-50735086 | Msa0774480:intron | 10.0% |
| !! | TAATCATATTTAAGTATTAA+CGG | + | chr5_2:50735495-50735514 | Msa0774480:intron | 10.0% |
| !!! | AAACTATTTTTCTAAAATAA+TGG | + | chr5_2:50736674-50736693 | Msa0774480:intron | 10.0% |
| !! | AAATAAAGGAAAATTCAAAA+TGG | - | chr5_2:50730132-50730151 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTCTTGATATTT+GGG | - | chr5_2:50730185-50730204 | None:intergenic | 15.0% |
| !!! | AATATACTGTATTTTTATCT+TGG | + | chr5_2:50732818-50732837 | Msa0774480:intron | 15.0% |
| !! | CTTCTTATATATTACAAAAA+GGG | + | chr5_2:50732985-50733004 | Msa0774480:CDS | 15.0% |
| !! | TTCTTATATATTACAAAAAG+GGG | + | chr5_2:50732986-50733005 | Msa0774480:CDS | 15.0% |
| !! | TTAATATTATAGAAATCGAA+TGG | - | chr5_2:50733511-50733530 | None:intergenic | 15.0% |
| !!! | TTTTATAGTTACACAAATTA+TGG | + | chr5_2:50733912-50733931 | Msa0774480:intron | 15.0% |
| !!! | TTTTATAGTTACACAAATTA+TGG | + | chr5_2:50733912-50733931 | Msa0774480:intron | 15.0% |
| !! | TTAGAAGTAATAAAATTGAT+CGG | + | chr5_2:50735117-50735136 | Msa0774480:intron | 15.0% |
| !!! | AATACTTATTATTTTGTTTG+TGG | + | chr5_2:50735194-50735213 | Msa0774480:intron | 15.0% |
| !!! | ATACTTATTATTTTGTTTGT+GGG | + | chr5_2:50735195-50735214 | Msa0774480:intron | 15.0% |
| !! | ATGTATAATAAGCAAATATA+TGG | - | chr5_2:50735262-50735281 | None:intergenic | 15.0% |
| !! | ATATTTGCTTATTATACATT+TGG | + | chr5_2:50735263-50735282 | Msa0774480:intron | 15.0% |
| !! | TTTAATATCAAATGTAAGAA+TGG | + | chr5_2:50735539-50735558 | Msa0774480:intron | 15.0% |
| !! | AATTCTTAAATTAAGATTCT+TGG | + | chr5_2:50735821-50735840 | Msa0774480:intron | 15.0% |
| !!! | GTTTTTAAGCAAAATAAATT+GGG | - | chr5_2:50736028-50736047 | None:intergenic | 15.0% |
| !!! | AGTTTTTAAGCAAAATAAAT+TGG | - | chr5_2:50736029-50736048 | None:intergenic | 15.0% |
| !!! | TATTTCCAGTTTTAATTAAA+TGG | - | chr5_2:50736061-50736080 | None:intergenic | 15.0% |
| !!! | ATTTTTCTAAAATAATGGTT+TGG | + | chr5_2:50736679-50736698 | Msa0774480:intron | 15.0% |
| !! | TCCAAATTTCTTATAAAAAT+AGG | - | chr5_2:50737532-50737551 | None:intergenic | 15.0% |
| !!! | TTTTATAAGAAATTTGGATT+TGG | + | chr5_2:50737534-50737553 | Msa0774480:three_prime_UTR | 15.0% |
| !! | ATTAATACTGATGATAACAA+TGG | + | chr5_2:50729438-50729457 | Msa0774480:CDS | 20.0% |
| !! | TATGATCATTATGATCATAT+TGG | - | chr5_2:50730108-50730127 | None:intergenic | 20.0% |
| !! | AACAATGGAAAAGTAAATAA+AGG | - | chr5_2:50730146-50730165 | None:intergenic | 20.0% |
| !!! | CTTTGTATTTTCTTGATATT+TGG | - | chr5_2:50730186-50730205 | None:intergenic | 20.0% |
| !! | TCAATGAAAAACATTTAACA+AGG | - | chr5_2:50730397-50730416 | None:intergenic | 20.0% |
| !! | AGAATCAGTAAATAAAACAA+AGG | - | chr5_2:50730549-50730568 | None:intergenic | 20.0% |
| !!! | GAACAAATCTTTTTACTAAT+TGG | + | chr5_2:50730572-50730591 | Msa0774480:intron | 20.0% |
| !!! | GAATAGAAATTTTAAAGGTT+CGG | - | chr5_2:50731023-50731042 | None:intergenic | 20.0% |
| !!! | TGAAATATGTTTTATTTTGC+AGG | + | chr5_2:50731096-50731115 | Msa0774480:intron | 20.0% |
| !!! | GAAATATGTTTTATTTTGCA+GGG | + | chr5_2:50731097-50731116 | Msa0774480:intron | 20.0% |
| !! | TCCAAGTTTAATTATCAATT+GGG | + | chr5_2:50731908-50731927 | Msa0774480:intron | 20.0% |
| !!! | TTTTTTTAAAGATGTTGTGA+AGG | - | chr5_2:50732119-50732138 | None:intergenic | 20.0% |
| !!! | TCAAAAACCTATGTTTTTTA+AGG | - | chr5_2:50732554-50732573 | None:intergenic | 20.0% |
| !! | AATACCAACAAAAATTAGAA+TGG | - | chr5_2:50732897-50732916 | None:intergenic | 20.0% |
| !! | ATATCTGATAGTCAATATAA+TGG | - | chr5_2:50732928-50732947 | None:intergenic | 20.0% |
| !!! | CCTTTTTGTAATATATAAGA+AGG | - | chr5_2:50732987-50733006 | None:intergenic | 20.0% |
| !! | CCTTCTTATATATTACAAAA+AGG | + | chr5_2:50732984-50733003 | Msa0774480:CDS | 20.0% |
| !! | TTCTTAAAATTATTAGTGTG+AGG | + | chr5_2:50733295-50733314 | Msa0774480:intron | 20.0% |
| !! | GATATATTTATATACACTGT+TGG | - | chr5_2:50733489-50733508 | None:intergenic | 20.0% |
| !! | TATTATCCTCAAAATTAGAT+AGG | + | chr5_2:50734283-50734302 | Msa0774480:intron | 20.0% |
| !!! | TATTTTCCTATCTAATTTTG+AGG | - | chr5_2:50734292-50734311 | None:intergenic | 20.0% |
| !!! | AATTTTATGTATTGAAACAC+AGG | + | chr5_2:50734585-50734604 | Msa0774480:intron | 20.0% |
| !! | TAAATAATTAAAGGGATGAT+AGG | + | chr5_2:50735075-50735094 | Msa0774480:intron | 20.0% |
| !!! | CCTTTTTAGTAATTGTTTTA+AGG | - | chr5_2:50735165-50735184 | None:intergenic | 20.0% |
| !! | CCTTAAAACAATTACTAAAA+AGG | + | chr5_2:50735162-50735181 | Msa0774480:intron | 20.0% |
| !! | TTTGGATATTTATTTATGCT+TGG | + | chr5_2:50735281-50735300 | Msa0774480:intron | 20.0% |
| !! | TAATGAGTTAGATTGAAATA+TGG | + | chr5_2:50735333-50735352 | Msa0774480:intron | 20.0% |
| !! | ATTACATATTATGCAAAGAA+AGG | - | chr5_2:50735479-50735498 | None:intergenic | 20.0% |
| !! | TTTAATATTCATAGCAAACA+TGG | + | chr5_2:50735790-50735809 | Msa0774480:intron | 20.0% |
| !!! | TTTGTTAGAAGGATTATTTT+CGG | - | chr5_2:50735850-50735869 | None:intergenic | 20.0% |
| !!! | AATCAAATTTTAATAGCTTG+AGG | - | chr5_2:50736796-50736815 | None:intergenic | 20.0% |
| !!! | AAAAAATACTTTTGAAGTCA+TGG | + | chr5_2:50736960-50736979 | Msa0774480:intron | 20.0% |
| !! | ATACAAACTTCAAAGAAATT+GGG | - | chr5_2:50737443-50737462 | None:intergenic | 20.0% |
| !! | TATACAAACTTCAAAGAAAT+TGG | - | chr5_2:50737444-50737463 | None:intergenic | 20.0% |
| !!! | GCCTATTTTTATAAGAAATT+TGG | + | chr5_2:50737528-50737547 | Msa0774480:three_prime_UTR | 20.0% |
| ! | TAATCCAACAAAAACGAAAT+CGG | - | chr5_2:50729513-50729532 | None:intergenic | 25.0% |
| ! | AGAATATTCATAATCAGGTT+GGG | + | chr5_2:50729685-50729704 | Msa0774480:CDS | 25.0% |
| !! | TTTTCTTGATATTTGGGAAA+TGG | - | chr5_2:50730179-50730198 | None:intergenic | 25.0% |
| !!! | CAAAGTTGTTTTTGATAACT+TGG | + | chr5_2:50730201-50730220 | Msa0774480:intron | 25.0% |
| !! | TCATCATGTATAAGTTTGTT+TGG | + | chr5_2:50730355-50730374 | Msa0774480:intron | 25.0% |
| !! | CAAATCTTTTTACTAATTGG+CGG | + | chr5_2:50730575-50730594 | Msa0774480:intron | 25.0% |
| !! | AAGTTGCAATTTTCTTACTA+AGG | - | chr5_2:50730608-50730627 | None:intergenic | 25.0% |
| ! | TAAGGTAAAAATGAATCTTG+TGG | + | chr5_2:50730637-50730656 | Msa0774480:intron | 25.0% |
| !! | ATTATTTTCTCCACATTATC+TGG | + | chr5_2:50730877-50730896 | Msa0774480:intron | 25.0% |
| !! | TGATGATATTTTATATCCAC+TGG | + | chr5_2:50731201-50731220 | Msa0774480:CDS | 25.0% |
| ! | TTTGTTTGTTCTACTTTACA+TGG | + | chr5_2:50731345-50731364 | Msa0774480:intron | 25.0% |
| !!! | TGTACAATTTTTGCTTTGTT+TGG | + | chr5_2:50731390-50731409 | Msa0774480:intron | 25.0% |
| !! | AACTTGGAGAATACATTTTA+CGG | - | chr5_2:50731896-50731915 | None:intergenic | 25.0% |
| ! | CTCCAAGTTTAATTATCAAT+TGG | + | chr5_2:50731907-50731926 | Msa0774480:intron | 25.0% |
| !! | TCCCAATTGATAATTAAACT+TGG | - | chr5_2:50731912-50731931 | None:intergenic | 25.0% |
| ! | TTAACTTTATCCTCAAACAA+TGG | - | chr5_2:50731947-50731966 | None:intergenic | 25.0% |
| ! | TTTACACGTCTAAGAAAAAT+TGG | + | chr5_2:50732019-50732038 | Msa0774480:intron | 25.0% |
| ! | TTACACGTCTAAGAAAAATT+GGG | + | chr5_2:50732020-50732039 | Msa0774480:intron | 25.0% |
| ! | ATATTATTTCACATTGGCAA+TGG | + | chr5_2:50732056-50732075 | Msa0774480:intron | 25.0% |
| ! | GAAAAAGATTTAGAAGTCAA+TGG | - | chr5_2:50732258-50732277 | None:intergenic | 25.0% |
| ! | ACAAACATTGAAGCAAATAA+GGG | - | chr5_2:50732327-50732346 | None:intergenic | 25.0% |
| ! | ATTAGTATTCCCTCTTAAAT+TGG | - | chr5_2:50732594-50732613 | None:intergenic | 25.0% |
| ! | CGATTAGAATCAACTAAAAA+AGG | + | chr5_2:50732688-50732707 | Msa0774480:intron | 25.0% |
| ! | AATCAACTAAAAAAGGAAAC+TGG | + | chr5_2:50732695-50732714 | Msa0774480:intron | 25.0% |
| ! | ATCAACTAAAAAAGGAAACT+GGG | + | chr5_2:50732696-50732715 | Msa0774480:intron | 25.0% |
| ! | AAACAAAATGAGATCAAGAA+AGG | - | chr5_2:50732794-50732813 | None:intergenic | 25.0% |
| ! | ACAAAAATTAGAATGGCAAA+AGG | - | chr5_2:50732890-50732909 | None:intergenic | 25.0% |
| !! | TTTGCCATTCTAATTTTTGT+TGG | + | chr5_2:50732890-50732909 | Msa0774480:intron | 25.0% |
| ! | ATATATTACAAAAAGGGGAA+AGG | + | chr5_2:50732991-50733010 | Msa0774480:CDS | 25.0% |
| !! | GAAAATTGCATACTTTTGTA+TGG | - | chr5_2:50733050-50733069 | None:intergenic | 25.0% |
| !! | TTTTTCTTGAATAGGGAATA+TGG | + | chr5_2:50733192-50733211 | Msa0774480:CDS | 25.0% |
| ! | TAGGCACACATATTATAATT+CGG | - | chr5_2:50733351-50733370 | None:intergenic | 25.0% |
| ! | GATTGATGAAACATATAACT+TGG | - | chr5_2:50733776-50733795 | None:intergenic | 25.0% |
| ! | TTGTGTAACTATAAAAGTCA+TGG | - | chr5_2:50733908-50733927 | None:intergenic | 25.0% |
| ! | TTGTGTAACTATAAAAGTCA+TGG | - | chr5_2:50733908-50733927 | None:intergenic | 25.0% |
| ! | TTTATTTGTGTACTTGTACA+CGG | + | chr5_2:50734152-50734171 | Msa0774480:intron | 25.0% |
| ! | ATTAGATAGGAAAATACCTA+CGG | + | chr5_2:50734296-50734315 | Msa0774480:intron | 25.0% |
| ! | TTCCTGTGTATGAAATTTAT+TGG | + | chr5_2:50734333-50734352 | Msa0774480:intron | 25.0% |
| ! | AACCAATAAATTTCATACAC+AGG | - | chr5_2:50734338-50734357 | None:intergenic | 25.0% |
| ! | GAAATAAAAAGTTCAAAACG+AGG | - | chr5_2:50734733-50734752 | None:intergenic | 25.0% |
| ! | ATTCTTGAGAATTGATAAGT+GGG | - | chr5_2:50734870-50734889 | None:intergenic | 25.0% |
| ! | TATGAAAGTGGAAGTTAAAA+TGG | - | chr5_2:50734942-50734961 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTGCTATGAAAG+TGG | - | chr5_2:50734954-50734973 | None:intergenic | 25.0% |
| !! | ATAAAATTGATCGGTTGTTT+TGG | + | chr5_2:50735126-50735145 | Msa0774480:intron | 25.0% |
| ! | CATATTTAAGTATTAACGGT+AGG | + | chr5_2:50735499-50735518 | Msa0774480:intron | 25.0% |
| ! | AATGAATAATATTCACCAAC+GGG | - | chr5_2:50735921-50735940 | None:intergenic | 25.0% |
| ! | GAATGAATAATATTCACCAA+CGG | - | chr5_2:50735922-50735941 | None:intergenic | 25.0% |
| !!! | AGTTTTAATTAAATGGCTAC+GGG | - | chr5_2:50736054-50736073 | None:intergenic | 25.0% |
| !!! | CAGTTTTAATTAAATGGCTA+CGG | - | chr5_2:50736055-50736074 | None:intergenic | 25.0% |
| !!! | TTTTAAAACCAATACCCAAA+TGG | + | chr5_2:50736092-50736111 | Msa0774480:intron | 25.0% |
| !!! | AACTAGGTTTTAATCAAAAC+TGG | + | chr5_2:50736607-50736626 | Msa0774480:intron | 25.0% |
| !!! | ACTAGGTTTTAATCAAAACT+GGG | + | chr5_2:50736608-50736627 | Msa0774480:intron | 25.0% |
| !! | CAAGTGGAATTTCTAAATTT+TGG | - | chr5_2:50736824-50736843 | None:intergenic | 25.0% |
| ! | AATATTTGACAACTTTCAAG+TGG | - | chr5_2:50736840-50736859 | None:intergenic | 25.0% |
| ! | AACTCATGATGTACAAATTA+AGG | + | chr5_2:50737304-50737323 | Msa0774480:three_prime_UTR | 25.0% |
| ! | ACTCATGATGTACAAATTAA+GGG | + | chr5_2:50737305-50737324 | Msa0774480:three_prime_UTR | 25.0% |
| ! | ATCATACTATCTATTATACG+AGG | - | chr5_2:50737377-50737396 | None:intergenic | 25.0% |
| !! | ATTAATTAAGTTGTTCCACT+TGG | + | chr5_2:50737492-50737511 | Msa0774480:three_prime_UTR | 25.0% |
| AATACTGATGATAACAATGG+TGG | + | chr5_2:50729441-50729460 | Msa0774480:CDS | 30.0% | |
| !! | TCGTTTTTGTTGGATTATTC+TGG | + | chr5_2:50729516-50729535 | Msa0774480:CDS | 30.0% |
| GAAGTTGCAATAAGGATTAT+TGG | + | chr5_2:50729654-50729673 | Msa0774480:CDS | 30.0% | |
| CTGATTATGAATATTCTCTC+CGG | - | chr5_2:50729682-50729701 | None:intergenic | 30.0% | |
| GAGAATATTCATAATCAGGT+TGG | + | chr5_2:50729684-50729703 | Msa0774480:CDS | 30.0% | |
| ! | GAATATTCATAATCAGGTTG+GGG | + | chr5_2:50729686-50729705 | Msa0774480:CDS | 30.0% |
| GAATGGAACAGAAAATAACA+GGG | + | chr5_2:50729890-50729909 | Msa0774480:CDS | 30.0% | |
| !! | TAATTTGCTTGGTAGAATAG+TGG | + | chr5_2:50730265-50730284 | Msa0774480:intron | 30.0% |
| ! | TAAGCCAAACAAGCATTTTT+CGG | - | chr5_2:50730432-50730451 | None:intergenic | 30.0% |
| !!! | AAGTTTTTTGAGGATCACAA+GGG | + | chr5_2:50730513-50730532 | Msa0774480:intron | 30.0% |
| CAGTAAATAAAACAAAGGTG+TGG | - | chr5_2:50730544-50730563 | None:intergenic | 30.0% | |
| TTGCAACTTTGCTAATTGTA+AGG | + | chr5_2:50730619-50730638 | Msa0774480:intron | 30.0% | |
| AGCTTTCATATTGTTAACAG+AGG | - | chr5_2:50730708-50730727 | None:intergenic | 30.0% | |
| ACAATTGTAACTTACGAGAA+AGG | - | chr5_2:50730769-50730788 | None:intergenic | 30.0% | |
| TTCATGTGATATGCATTTAC+TGG | + | chr5_2:50731167-50731186 | Msa0774480:CDS | 30.0% | |
| !!! | GTTGTTTTTATAAGCTATCC+TGG | + | chr5_2:50731528-50731547 | Msa0774480:intron | 30.0% |
| TGATCTTAACTACATATGCA+AGG | - | chr5_2:50731637-50731656 | None:intergenic | 30.0% | |
| TCAAATAAGTCAATCCAAAC+AGG | + | chr5_2:50731654-50731673 | Msa0774480:intron | 30.0% | |
| !!! | ACAATATTGCAGCTGTTTTT+TGG | + | chr5_2:50731772-50731791 | Msa0774480:intron | 30.0% |
| TCATGAAACAACTACAAAGA+AGG | - | chr5_2:50731819-50731838 | None:intergenic | 30.0% | |
| AGAAAAATTGGGAATGTTAG+CGG | + | chr5_2:50732031-50732050 | Msa0774480:intron | 30.0% | |
| ATACATGAGAACATATAGAC+AGG | + | chr5_2:50732281-50732300 | Msa0774480:intron | 30.0% | |
| GACAAACATTGAAGCAAATA+AGG | - | chr5_2:50732328-50732347 | None:intergenic | 30.0% | |
| ATTTGATGTATTGTGCATGA+CGG | + | chr5_2:50732407-50732426 | Msa0774480:intron | 30.0% | |
| !! | TAATTTGGTTGTCACTTTGT+CGG | - | chr5_2:50732500-50732519 | None:intergenic | 30.0% |
| AAGTGACAACCAAATTAGAA+AGG | + | chr5_2:50732503-50732522 | Msa0774480:intron | 30.0% | |
| ! | ACATAGGTTTTTGAACTAGA+TGG | + | chr5_2:50732560-50732579 | Msa0774480:intron | 30.0% |
| ! | AGTTGATTCTAATCGCTAAA+AGG | - | chr5_2:50732683-50732702 | None:intergenic | 30.0% |
| GACTATCAGATATATTGATG+CGG | + | chr5_2:50732935-50732954 | Msa0774480:intron | 30.0% | |
| !!! | TGACATTGTCTGACTTTTTT+AGG | + | chr5_2:50733095-50733114 | Msa0774480:intron | 30.0% |
| ATTCCCTATTCAAGAAAAAC+CGG | - | chr5_2:50733191-50733210 | None:intergenic | 30.0% | |
| TTATAATATGTGTGCCTATC+AGG | + | chr5_2:50733353-50733372 | Msa0774480:intron | 30.0% | |
| !! | CTTTCTTGATAATGCTTTCA+AGG | - | chr5_2:50733397-50733416 | None:intergenic | 30.0% |
| !! | CTTGAAAGCATTATCAAGAA+AGG | + | chr5_2:50733395-50733414 | Msa0774480:CDS | 30.0% |
| TCAAGAAAGGAAGTTCATTA+CGG | + | chr5_2:50733408-50733427 | Msa0774480:CDS | 30.0% | |
| CGGAACTGGAAAAAAAAATT+GGG | - | chr5_2:50733593-50733612 | None:intergenic | 30.0% | |
| ACGGAACTGGAAAAAAAAAT+TGG | - | chr5_2:50733594-50733613 | None:intergenic | 30.0% | |
| !!! | TGTTCTGATTCAGTGTTTTT+TGG | + | chr5_2:50733668-50733687 | Msa0774480:intron | 30.0% |
| TACATGAGATGAATTGTAGT+TGG | + | chr5_2:50733740-50733759 | Msa0774480:intron | 30.0% | |
| TGATGAAACATATAACTTGG+AGG | - | chr5_2:50733773-50733792 | None:intergenic | 30.0% | |
| CATGCATATAACGTATAACT+TGG | - | chr5_2:50733846-50733865 | None:intergenic | 30.0% | |
| ACTATAAAAGTCATGGATGA+TGG | - | chr5_2:50733901-50733920 | None:intergenic | 30.0% | |
| TTATGGTGATACTATTCATC+AGG | + | chr5_2:50733929-50733948 | Msa0774480:intron | 30.0% | |
| CATGCATATAACGTATAACT+TGG | - | chr5_2:50733846-50733865 | None:intergenic | 30.0% | |
| ACTATAAAAGTCATGGATGA+TGG | - | chr5_2:50733901-50733920 | None:intergenic | 30.0% | |
| TTATGGTGATACTATTCATC+AGG | + | chr5_2:50733929-50733948 | Msa0774480:intron | 30.0% | |
| CAAATATAACAAGCAACCAT+AGG | - | chr5_2:50734225-50734244 | None:intergenic | 30.0% | |
| AAACAGTCAGAGGAATATAA+GGG | - | chr5_2:50734256-50734275 | None:intergenic | 30.0% | |
| !!! | ATATTTTCTGAAACAGTCAG+AGG | - | chr5_2:50734266-50734285 | None:intergenic | 30.0% |
| ATTCATCATGTGTTATGCAA+GGG | + | chr5_2:50734377-50734396 | Msa0774480:intron | 30.0% | |
| ! | ATGCACAGATACTTTGTTAT+TGG | + | chr5_2:50734521-50734540 | Msa0774480:intron | 30.0% |
| !! | TGCACAGATACTTTGTTATT+GGG | + | chr5_2:50734522-50734541 | Msa0774480:intron | 30.0% |
| AAGTTCAAAACGAGGAATAA+AGG | - | chr5_2:50734725-50734744 | None:intergenic | 30.0% | |
| ! | AGAGCGCTAAAAAATTGTTT+AGG | + | chr5_2:50734804-50734823 | Msa0774480:intron | 30.0% |
| GCTAAAAAATTGTTTAGGCT+TGG | + | chr5_2:50734809-50734828 | Msa0774480:intron | 30.0% | |
| CATTCTTGAGAATTGATAAG+TGG | - | chr5_2:50734871-50734890 | None:intergenic | 30.0% | |
| AAGTGGAAGTTAAAATGGAA+CGG | - | chr5_2:50734937-50734956 | None:intergenic | 30.0% | |
| TCAGTGCGATAAATAGTTTA+CGG | - | chr5_2:50735032-50735051 | None:intergenic | 30.0% | |
| !!! | GAAATGATTTTTTTTTCCCC+AGG | - | chr5_2:50735449-50735468 | None:intergenic | 30.0% |
| ATGGATAAGAGAGAAAGATA+AGG | + | chr5_2:50735558-50735577 | Msa0774480:intron | 30.0% | |
| ! | AGTTGTGTATCATGTTTTCT+AGG | + | chr5_2:50735637-50735656 | Msa0774480:intron | 30.0% |
| CGCAAGAAACAAATATTTCT+AGG | - | chr5_2:50735764-50735783 | None:intergenic | 30.0% | |
| !!! | AATTTTTTTGGACATCCCTT+GGG | - | chr5_2:50735958-50735977 | None:intergenic | 30.0% |
| !!! | GTTTTTTAAAATGGTTCTGC+TGG | - | chr5_2:50735984-50736003 | None:intergenic | 30.0% |
| !! | CAGAACCATTTTAAAAAACC+TGG | + | chr5_2:50735985-50736004 | Msa0774480:intron | 30.0% |
| !!! | ATACGCCAGGTTTTTTAAAA+TGG | - | chr5_2:50735993-50736012 | None:intergenic | 30.0% |
| !!! | GTTTTTTAATTACATACGCC+AGG | - | chr5_2:50736006-50736025 | None:intergenic | 30.0% |
| CGTAGCCATTTAATTAAAAC+TGG | + | chr5_2:50736053-50736072 | Msa0774480:intron | 30.0% | |
| !!! | TGGGTATTGGTTTTAAAAGT+GGG | - | chr5_2:50736090-50736109 | None:intergenic | 30.0% |
| !!! | TTGGGTATTGGTTTTAAAAG+TGG | - | chr5_2:50736091-50736110 | None:intergenic | 30.0% |
| CACATTAAGTTTGACCATTT+GGG | - | chr5_2:50736109-50736128 | None:intergenic | 30.0% | |
| AGAGTTTCGTTAATAGAACT+GGG | + | chr5_2:50736501-50736520 | Msa0774480:intron | 30.0% | |
| GAAAGTAAAAAAGAAGTCGT+TGG | + | chr5_2:50736578-50736597 | Msa0774480:intron | 30.0% | |
| AAGTCGTTGGATTAATAACT+AGG | + | chr5_2:50736591-50736610 | Msa0774480:intron | 30.0% | |
| TCAAAACCTAAACCAAATAG+TGG | + | chr5_2:50736706-50736725 | Msa0774480:intron | 30.0% | |
| ATAGAAACCAATCCACTATT+TGG | - | chr5_2:50736721-50736740 | None:intergenic | 30.0% | |
| !! | AAATAGTGGATTGGTTTCTA+TGG | + | chr5_2:50736720-50736739 | Msa0774480:intron | 30.0% |
| !! | GGAATTTCTAAATTTTGGTG+TGG | - | chr5_2:50736819-50736838 | None:intergenic | 30.0% |
| TGAAATAACTACTGATGAAG+AGG | + | chr5_2:50736859-50736878 | Msa0774480:intron | 30.0% | |
| AGAAAGAAAAAACACTTCTG+AGG | - | chr5_2:50736986-50737005 | None:intergenic | 30.0% | |
| ATACAAGTCATTACACAAAC+TGG | + | chr5_2:50737083-50737102 | Msa0774480:intron | 30.0% | |
| TTACACAAACTGGTATTAAG+AGG | + | chr5_2:50737093-50737112 | Msa0774480:intron | 30.0% | |
| !! | CTGAATAAAGAAGTGTTTGT+TGG | - | chr5_2:50737176-50737195 | None:intergenic | 30.0% |
| CAACAAACACTTCTTTATTC+AGG | + | chr5_2:50737174-50737193 | Msa0774480:intron | 30.0% | |
| !! | CATGAGTTGATTAAAACAAC+TGG | - | chr5_2:50737292-50737311 | None:intergenic | 30.0% |
| TTTGCTGAGATACTCAAAAT+CGG | + | chr5_2:50737329-50737348 | Msa0774480:three_prime_UTR | 30.0% | |
| TCTATTATACGAGGAATATG+AGG | - | chr5_2:50737368-50737387 | None:intergenic | 30.0% | |
| !! | GTTTGTATATGTTTTTGCAC+AGG | + | chr5_2:50737455-50737474 | Msa0774480:three_prime_UTR | 30.0% |
| ! | ATAACAATGGTGGTGTAACT+TGG | + | chr5_2:50729451-50729470 | Msa0774480:CDS | 35.0% |
| AACGAAATCGGTGACAAAAA+GGG | - | chr5_2:50729501-50729520 | None:intergenic | 35.0% | |
| AAACGAAATCGGTGACAAAA+AGG | - | chr5_2:50729502-50729521 | None:intergenic | 35.0% | |
| CGGAGAGAATATTCATAATC+AGG | + | chr5_2:50729680-50729699 | Msa0774480:CDS | 35.0% | |
| GAAGTAGGTTATGATGATTG+TGG | + | chr5_2:50729708-50729727 | Msa0774480:CDS | 35.0% | |
| GGAATGGAACAGAAAATAAC+AGG | + | chr5_2:50729889-50729908 | Msa0774480:CDS | 35.0% | |
| TCAGAGATATGATATTCAGC+TGG | + | chr5_2:50729926-50729945 | Msa0774480:CDS | 35.0% | |
| TTCATTCGACAGCATTTACA+AGG | + | chr5_2:50730002-50730021 | Msa0774480:CDS | 35.0% | |
| TTTGTTTGTGATGTTGAGCT+TGG | + | chr5_2:50730064-50730083 | Msa0774480:intron | 35.0% | |
| AATGGAAGAGCTACTAACAA+TGG | - | chr5_2:50730161-50730180 | None:intergenic | 35.0% | |
| !! | TTGTTCTGAGGTAATTTGCT+TGG | + | chr5_2:50730254-50730273 | Msa0774480:intron | 35.0% |
| !! | AGCATTTTTCGGTTGGATTT+GGG | - | chr5_2:50730421-50730440 | None:intergenic | 35.0% |
| !! | AAGCATTTTTCGGTTGGATT+TGG | - | chr5_2:50730422-50730441 | None:intergenic | 35.0% |
| !!! | TTTCTCTAAGCCCCTTTTTT+GGG | - | chr5_2:50730473-50730492 | None:intergenic | 35.0% |
| !!! | ATCACGTGAGAAGTTTTTTG+AGG | + | chr5_2:50730503-50730522 | Msa0774480:intron | 35.0% |
| !!! | GAAGTTTTTTGAGGATCACA+AGG | + | chr5_2:50730512-50730531 | Msa0774480:intron | 35.0% |
| TTTACAATCTCTTCCTCTGA+AGG | + | chr5_2:50730800-50730819 | Msa0774480:intron | 35.0% | |
| CATGCTATAAGTGTGAACAA+TGG | - | chr5_2:50730834-50730853 | None:intergenic | 35.0% | |
| ! | GCATGAGTCTTGTCTTAATT+TGG | + | chr5_2:50730849-50730868 | Msa0774480:intron | 35.0% |
| GAAATGACTACCAGATAATG+TGG | - | chr5_2:50730890-50730909 | None:intergenic | 35.0% | |
| CAGGTTTCTTTGTCACAATT+TGG | + | chr5_2:50730920-50730939 | Msa0774480:intron | 35.0% | |
| ACATATTTCACTCAGCGTTA+TGG | - | chr5_2:50731086-50731105 | None:intergenic | 35.0% | |
| !!! | GTTTTATTTTGCAGGGAGAT+AGG | + | chr5_2:50731104-50731123 | Msa0774480:intron | 35.0% |
| ATGTGATATGCATTTACTGG+TGG | + | chr5_2:50731170-50731189 | Msa0774480:CDS | 35.0% | |
| ATATTCACGATCTTGGTCAA+TGG | + | chr5_2:50731262-50731281 | Msa0774480:CDS | 35.0% | |
| AGACTGTTTGGAAAAGCTTA+TGG | - | chr5_2:50731607-50731626 | None:intergenic | 35.0% | |
| ! | CTTTTTACTAAGGACCTGTT+TGG | - | chr5_2:50731671-50731690 | None:intergenic | 35.0% |
| !!! | CAGGAGCTTACTTTTTACTA+AGG | - | chr5_2:50731681-50731700 | None:intergenic | 35.0% |
| ATGCATGACATACATATGCA+AGG | + | chr5_2:50731732-50731751 | Msa0774480:intron | 35.0% | |
| TGCATGACATACATATGCAA+GGG | + | chr5_2:50731733-50731752 | Msa0774480:intron | 35.0% | |
| ! | TTAATCGACTCCATTGTTTG+AGG | + | chr5_2:50731934-50731953 | Msa0774480:intron | 35.0% |
| GCGGACATATTATTTCACAT+TGG | + | chr5_2:50732050-50732069 | Msa0774480:intron | 35.0% | |
| AAGGCTGATCCTTTCTAATT+TGG | - | chr5_2:50732515-50732534 | None:intergenic | 35.0% | |
| GGCTGAACCTTAAAAAACAT+AGG | + | chr5_2:50732544-50732563 | Msa0774480:intron | 35.0% | |
| GCTCTAGTACCAATTTAAGA+GGG | + | chr5_2:50732582-50732601 | Msa0774480:intron | 35.0% | |
| ATCCCTTCAGATTGTAATTG+TGG | + | chr5_2:50732864-50732883 | Msa0774480:intron | 35.0% | |
| !!! | GTACCGGTTTTTCTTGAATA+GGG | + | chr5_2:50733185-50733204 | Msa0774480:CDS | 35.0% |
| GAAAGTTAAATACAACCCTG+TGG | - | chr5_2:50733238-50733257 | None:intergenic | 35.0% | |
| AACTTTCAAGCTAACATCTG+TGG | + | chr5_2:50733251-50733270 | Msa0774480:CDS | 35.0% | |
| !! | AATAAAGCATTGGACCTGAT+AGG | - | chr5_2:50733370-50733389 | None:intergenic | 35.0% |
| TCAAGGCAGAAATAAAGCAT+TGG | - | chr5_2:50733380-50733399 | None:intergenic | 35.0% | |
| CAAGAAAGGAAGTTCATTAC+GGG | + | chr5_2:50733409-50733428 | Msa0774480:CDS | 35.0% | |
| AAGAAAGGAAGTTCATTACG+GGG | + | chr5_2:50733410-50733429 | Msa0774480:CDS | 35.0% | |
| AATTATTACCTGTTCTGCTG+TGG | - | chr5_2:50733442-50733461 | None:intergenic | 35.0% | |
| AAATTCCACATGGCATTAGA+GGG | - | chr5_2:50733541-50733560 | None:intergenic | 35.0% | |
| AAAATTCCACATGGCATTAG+AGG | - | chr5_2:50733542-50733561 | None:intergenic | 35.0% | |
| ! | TCTAATGCCATGTGGAATTT+TGG | + | chr5_2:50733541-50733560 | Msa0774480:intron | 35.0% |
| AAAAAAAATTGGGCAGGGAA+TGG | - | chr5_2:50733583-50733602 | None:intergenic | 35.0% | |
| CTGGAAAAAAAAATTGGGCA+GGG | - | chr5_2:50733588-50733607 | None:intergenic | 35.0% | |
| ACTGGAAAAAAAAATTGGGC+AGG | - | chr5_2:50733589-50733608 | None:intergenic | 35.0% | |
| AGTATCTTCCGAAAAACCTA+TGG | + | chr5_2:50734206-50734225 | Msa0774480:intron | 35.0% | |
| ! | ACAAGCAACCATAGGTTTTT+CGG | - | chr5_2:50734217-50734236 | None:intergenic | 35.0% |
| AACAGTCAGAGGAATATAAG+GGG | - | chr5_2:50734255-50734274 | None:intergenic | 35.0% | |
| GAAACAGTCAGAGGAATATA+AGG | - | chr5_2:50734257-50734276 | None:intergenic | 35.0% | |
| AAAACAAAACAAGCTACCGT+AGG | - | chr5_2:50734315-50734334 | None:intergenic | 35.0% | |
| GATTCATCATGTGTTATGCA+AGG | + | chr5_2:50734376-50734395 | Msa0774480:intron | 35.0% | |
| !! | GCACAGATACTTTGTTATTG+GGG | + | chr5_2:50734523-50734542 | Msa0774480:intron | 35.0% |
| CAAAACGAGGAATAAAGGTA+TGG | - | chr5_2:50734720-50734739 | None:intergenic | 35.0% | |
| TTTATCGCACTGAGAGATAT+AGG | + | chr5_2:50735039-50735058 | Msa0774480:intron | 35.0% | |
| ATTTATGCTTGGATATGTCC+TGG | + | chr5_2:50735292-50735311 | Msa0774480:intron | 35.0% | |
| TTTATGCTTGGATATGTCCT+GGG | + | chr5_2:50735293-50735312 | Msa0774480:intron | 35.0% | |
| !!! | ATCTCTAGATCTTTTTTCCC+AGG | - | chr5_2:50735313-50735332 | None:intergenic | 35.0% |
| ! | TTGGTTGTTATTGAATGTCC+TGG | + | chr5_2:50735428-50735447 | Msa0774480:intron | 35.0% |
| ! | TGGTTGTTATTGAATGTCCT+GGG | + | chr5_2:50735429-50735448 | Msa0774480:intron | 35.0% |
| ! | CAACCTAAACATTTTCACAC+TGG | - | chr5_2:50735723-50735742 | None:intergenic | 35.0% |
| CAGTGTGAAAATGTTTAGGT+TGG | + | chr5_2:50735721-50735740 | Msa0774480:intron | 35.0% | |
| TTCAAATATAGTCATGCCCA+AGG | + | chr5_2:50735939-50735958 | Msa0774480:intron | 35.0% | |
| TCAAATATAGTCATGCCCAA+GGG | + | chr5_2:50735940-50735959 | Msa0774480:intron | 35.0% | |
| !!! | CAATTTTTTTGGACATCCCT+TGG | - | chr5_2:50735959-50735978 | None:intergenic | 35.0% |
| CAAGGGATGTCCAAAAAAAT+TGG | + | chr5_2:50735957-50735976 | Msa0774480:intron | 35.0% | |
| !!! | TTCTGCTGGACCAATTTTTT+TGG | - | chr5_2:50735970-50735989 | None:intergenic | 35.0% |
| AAGTTTGACCATTTGGGTAT+TGG | - | chr5_2:50736103-50736122 | None:intergenic | 35.0% | |
| GCACATTAAGTTTGACCATT+TGG | - | chr5_2:50736110-50736129 | None:intergenic | 35.0% | |
| AATTCTCAATCCTTTCTCGT+TGG | + | chr5_2:50736181-50736200 | Msa0774480:intron | 35.0% | |
| ACATCAGATGAACGAATCAA+AGG | - | chr5_2:50736218-50736237 | None:intergenic | 35.0% | |
| GCACTTGCAGAAAAATCAAA+CGG | + | chr5_2:50736273-50736292 | Msa0774480:intron | 35.0% | |
| ATCACTGAATCAGGATATCT+CGG | - | chr5_2:50736416-50736435 | None:intergenic | 35.0% | |
| GGAAAAGATATCACTGAATC+AGG | - | chr5_2:50736425-50736444 | None:intergenic | 35.0% | |
| ! | TTCAGTGATATCTTTTCCAG+TGG | + | chr5_2:50736427-50736446 | Msa0774480:intron | 35.0% |
| CAGAGTTTCGTTAATAGAAC+TGG | + | chr5_2:50736500-50736519 | Msa0774480:intron | 35.0% | |
| GAGTTTCGTTAATAGAACTG+GGG | + | chr5_2:50736502-50736521 | Msa0774480:intron | 35.0% | |
| TAATAGAACTGGGGAAACAA+AGG | + | chr5_2:50736511-50736530 | Msa0774480:intron | 35.0% | |
| AATAGAACTGGGGAAACAAA+GGG | + | chr5_2:50736512-50736531 | Msa0774480:intron | 35.0% | |
| ACAGAATAACTCTGAACTGT+TGG | + | chr5_2:50736546-50736565 | Msa0774480:intron | 35.0% | |
| !! | ACCTAAACCAAATAGTGGAT+TGG | + | chr5_2:50736711-50736730 | Msa0774480:intron | 35.0% |
| ! | ACCAATCCACTATTTGGTTT+AGG | - | chr5_2:50736715-50736734 | None:intergenic | 35.0% |
| TTACAGTGACTCATGCTTAA+TGG | + | chr5_2:50736748-50736767 | Msa0774480:intron | 35.0% | |
| ! | TATTCAGGTTTGAGAGAGAA+AGG | + | chr5_2:50737189-50737208 | Msa0774480:intron | 35.0% |
| TTTAACCAATGCTCTGCATA+GGG | - | chr5_2:50737222-50737241 | None:intergenic | 35.0% | |
| TTGCTGAGATACTCAAAATC+GGG | + | chr5_2:50737330-50737349 | Msa0774480:three_prime_UTR | 35.0% | |
| ! | GACGATGCTGATGATAATGA+TGG | - | chr5_2:50729399-50729418 | None:intergenic | 40.0% |
| ! | GCATCGTCATCATCATCTTT+TGG | + | chr5_2:50729411-50729430 | Msa0774480:CDS | 40.0% |
| ! | TCGTCATCATCATCTTTTGG+AGG | + | chr5_2:50729414-50729433 | Msa0774480:CDS | 40.0% |
| ! | CGTCATCATCATCTTTTGGA+GGG | + | chr5_2:50729415-50729434 | Msa0774480:CDS | 40.0% |
| ! | AATGGTGGTGTAACTTGGTA+TGG | + | chr5_2:50729456-50729475 | Msa0774480:CDS | 40.0% |
| GTGTAACTTGGTATGGAATG+AGG | + | chr5_2:50729463-50729482 | Msa0774480:CDS | 40.0% | |
| ACGAAATCGGTGACAAAAAG+GGG | - | chr5_2:50729500-50729519 | None:intergenic | 40.0% | |
| !!! | GTCACCGATTTCGTTTTTGT+TGG | + | chr5_2:50729506-50729525 | Msa0774480:CDS | 40.0% |
| CGTTCGAGTAATGATTCTGA+GGG | + | chr5_2:50729546-50729565 | Msa0774480:CDS | 40.0% | |
| ! | GAGGGTATGATTGTCAACAA+CGG | + | chr5_2:50729564-50729583 | Msa0774480:CDS | 40.0% |
| ATTGTCAACAACGGAGTTTC+TGG | + | chr5_2:50729573-50729592 | Msa0774480:intron | 40.0% | |
| GCAATAAGGATTATTGGAGC+CGG | + | chr5_2:50729660-50729679 | Msa0774480:CDS | 40.0% | |
| AGGTTATGATGATTGTGGTG+AGG | + | chr5_2:50729713-50729732 | Msa0774480:CDS | 40.0% | |
| GAAGAAGATGAAGACACAAG+AGG | - | chr5_2:50729825-50729844 | None:intergenic | 40.0% | |
| !! | TCCTTTCTCGCTTTTGTTGT+TGG | + | chr5_2:50729974-50729993 | Msa0774480:CDS | 40.0% |
| ACCAACAACAAAAGCGAGAA+AGG | - | chr5_2:50729978-50729997 | None:intergenic | 40.0% | |
| TTGCTTGGTAGAATAGTGGT+TGG | + | chr5_2:50730269-50730288 | Msa0774480:intron | 40.0% | |
| TTTCCATCATTCCCAAATGC+AGG | - | chr5_2:50730300-50730319 | None:intergenic | 40.0% | |
| !! | CCAAACAAGCATTTTTCGGT+TGG | - | chr5_2:50730428-50730447 | None:intergenic | 40.0% |
| CCAACCGAAAAATGCTTGTT+TGG | + | chr5_2:50730425-50730444 | Msa0774480:intron | 40.0% | |
| ! | GCTTGTTTGGCTTACAATAC+TGG | + | chr5_2:50730438-50730457 | Msa0774480:intron | 40.0% |
| !! | TGGCTGTTGTTTCCCAAAAA+AGG | + | chr5_2:50730458-50730477 | Msa0774480:intron | 40.0% |
| !! | GGCTGTTGTTTCCCAAAAAA+GGG | + | chr5_2:50730459-50730478 | Msa0774480:intron | 40.0% |
| !! | GCTGTTGTTTCCCAAAAAAG+GGG | + | chr5_2:50730460-50730479 | Msa0774480:intron | 40.0% |
| !!! | CTTTCTCTAAGCCCCTTTTT+TGG | - | chr5_2:50730474-50730493 | None:intergenic | 40.0% |
| ! | TAAGAAGCAGACAGCTTTGA+AGG | + | chr5_2:50730978-50730997 | Msa0774480:CDS | 40.0% |
| AGGAAAGTCTCTTTACTTGC+TGG | + | chr5_2:50731124-50731143 | Msa0774480:CDS | 40.0% | |
| GTGAATATTGCATGCCAGAA+AGG | - | chr5_2:50731250-50731269 | None:intergenic | 40.0% | |
| GCATGCAATATTCACGATCT+TGG | + | chr5_2:50731255-50731274 | Msa0774480:CDS | 40.0% | |
| TTGATCTTACATTGCTGCAG+TGG | + | chr5_2:50731307-50731326 | Msa0774480:intron | 40.0% | |
| CCTGTAATAATTACAGACCC+CGG | + | chr5_2:50731697-50731716 | Msa0774480:intron | 40.0% | |
| CTGTAATAATTACAGACCCC+GGG | + | chr5_2:50731698-50731717 | Msa0774480:intron | 40.0% | |
| !!! | AGCTGTTTTTTGGTCACTGA+TGG | + | chr5_2:50731782-50731801 | Msa0774480:intron | 40.0% |
| ! | TTGGTCACTGATGGTGAAAT+TGG | + | chr5_2:50731791-50731810 | Msa0774480:intron | 40.0% |
| AAACTTGCCTATGTGTAGAC+AGG | + | chr5_2:50731867-50731886 | Msa0774480:intron | 40.0% | |
| CTGCAGTCGATATCACATAA+GGG | - | chr5_2:50731989-50732008 | None:intergenic | 40.0% | |
| ACTGCAGTCGATATCACATA+AGG | - | chr5_2:50731990-50732009 | None:intergenic | 40.0% | |
| TAACCAAGTTGCATCTCAGT+AGG | + | chr5_2:50732185-50732204 | Msa0774480:intron | 40.0% | |
| ATTAGAAAGGATCAGCCTTC+TGG | + | chr5_2:50732516-50732535 | Msa0774480:intron | 40.0% | |
| ! | GGCTCTAGTACCAATTTAAG+AGG | + | chr5_2:50732581-50732600 | Msa0774480:intron | 40.0% |
| GGCCACAATTACAATCTGAA+GGG | - | chr5_2:50732869-50732888 | None:intergenic | 40.0% | |
| AGGCCACAATTACAATCTGA+AGG | - | chr5_2:50732870-50732889 | None:intergenic | 40.0% | |
| AAGTGTTAATCACCTGTCGA+CGG | - | chr5_2:50733026-50733045 | None:intergenic | 40.0% | |
| !!! | GGTACCGGTTTTTCTTGAAT+AGG | + | chr5_2:50733184-50733203 | Msa0774480:CDS | 40.0% |
| ! | AATGCCATGTGGAATTTTGG+AGG | + | chr5_2:50733544-50733563 | Msa0774480:intron | 40.0% |
| ACATCCTCCAAAATTCCACA+TGG | - | chr5_2:50733551-50733570 | None:intergenic | 40.0% | |
| AAAATCCCATGCAACAGCAA+CGG | - | chr5_2:50733613-50733632 | None:intergenic | 40.0% | |
| ATTTGTGTACTTGTACACGG+TGG | + | chr5_2:50734155-50734174 | Msa0774480:intron | 40.0% | |
| ! | CGGTGGTGTATATTGTTTTC+TGG | + | chr5_2:50734172-50734191 | Msa0774480:intron | 40.0% |
| ACAGTCAGAGGAATATAAGG+GGG | - | chr5_2:50734254-50734273 | None:intergenic | 40.0% | |
| TCTCTTGGCATATAGCACAT+AGG | - | chr5_2:50734627-50734646 | None:intergenic | 40.0% | |
| TGTGGGAGAAGTTGAATTCA+TGG | + | chr5_2:50735212-50735231 | Msa0774480:intron | 40.0% | |
| AATATATGGCTTTCCCATGG+TGG | - | chr5_2:50735248-50735267 | None:intergenic | 40.0% | |
| GCAAATATATGGCTTTCCCA+TGG | - | chr5_2:50735251-50735270 | None:intergenic | 40.0% | |
| ! | GGTTGTTATTGAATGTCCTG+GGG | + | chr5_2:50735430-50735449 | Msa0774480:intron | 40.0% |
| TAACGGTAGGTGAGTTTAGT+AGG | + | chr5_2:50735512-50735531 | Msa0774480:intron | 40.0% | |
| AGAGAAAGATAAGGTTCCCT+AGG | + | chr5_2:50735567-50735586 | Msa0774480:intron | 40.0% | |
| AACTGCAAATAGACTCCACA+TGG | - | chr5_2:50735621-50735640 | None:intergenic | 40.0% | |
| ! | TCGTGAACCTGAAGTATTCT+TGG | + | chr5_2:50735677-50735696 | Msa0774480:intron | 40.0% |
| ! | CGTGAACCTGAAGTATTCTT+GGG | + | chr5_2:50735678-50735697 | Msa0774480:intron | 40.0% |
| !! | TGGGTGTTGGACAATGTTTA+AGG | + | chr5_2:50735697-50735716 | Msa0774480:intron | 40.0% |
| AGGCCAGTGTGAAAATGTTT+AGG | + | chr5_2:50735717-50735736 | Msa0774480:intron | 40.0% | |
| ! | AACACCACTGCACTTTTACT+AGG | + | chr5_2:50735868-50735887 | Msa0774480:intron | 40.0% |
| CTAAGGAAAAATGATCCCGT+TGG | + | chr5_2:50735903-50735922 | Msa0774480:intron | 40.0% | |
| ! | TGGCTGAGAGCACATAAATT+TGG | - | chr5_2:50736136-50736155 | None:intergenic | 40.0% |
| CAGATGAACGAATCAAAGGA+TGG | - | chr5_2:50736214-50736233 | None:intergenic | 40.0% | |
| TGGAGAGAAACGACAAGAAA+GGG | - | chr5_2:50736245-50736264 | None:intergenic | 40.0% | |
| TTGGAGAGAAACGACAAGAA+AGG | - | chr5_2:50736246-50736265 | None:intergenic | 40.0% | |
| ! | TTTCTTGTCGTTTCTCTCCA+AGG | + | chr5_2:50736245-50736264 | Msa0774480:intron | 40.0% |
| ! | TTCTTGTCGTTTCTCTCCAA+GGG | + | chr5_2:50736246-50736265 | Msa0774480:intron | 40.0% |
| AATAATGTCACAGTCGAGTG+AGG | + | chr5_2:50736312-50736331 | Msa0774480:intron | 40.0% | |
| ! | AGTGATATCTTTTCCAGTGG+AGG | + | chr5_2:50736430-50736449 | Msa0774480:intron | 40.0% |
| ! | GTGATATCTTTTCCAGTGGA+GGG | + | chr5_2:50736431-50736450 | Msa0774480:intron | 40.0% |
| AGTCAGTGAGTGTAGTAGAA+AGG | + | chr5_2:50736477-50736496 | Msa0774480:intron | 40.0% | |
| AATCAAAACTGGGTCTGAAC+TGG | + | chr5_2:50736618-50736637 | Msa0774480:intron | 40.0% | |
| ATCAAAACTGGGTCTGAACT+GGG | + | chr5_2:50736619-50736638 | Msa0774480:intron | 40.0% | |
| ! | GAGGTATATTTGAGACGTGT+TGG | + | chr5_2:50736878-50736897 | Msa0774480:intron | 40.0% |
| TTAACCAATGCTCTGCATAG+GGG | - | chr5_2:50737221-50737240 | None:intergenic | 40.0% | |
| CTTTAACCAATGCTCTGCAT+AGG | - | chr5_2:50737223-50737242 | None:intergenic | 40.0% | |
| TGCTGAGATACTCAAAATCG+GGG | + | chr5_2:50737331-50737350 | Msa0774480:three_prime_UTR | 40.0% | |
| TACGAGGAATATGAGGTTAG+CGG | - | chr5_2:50737361-50737380 | None:intergenic | 40.0% | |
| GGTGACAAAAAGGGGTTAAC+AGG | - | chr5_2:50729492-50729511 | None:intergenic | 45.0% | |
| GCGTTCGAGTAATGATTCTG+AGG | + | chr5_2:50729545-50729564 | Msa0774480:CDS | 45.0% | |
| !! | CAACAACGGAGTTTCTGGTT+CGG | + | chr5_2:50729578-50729597 | Msa0774480:intron | 45.0% |
| !! | TTACGATCTCAGGTTGATGC+TGG | + | chr5_2:50729603-50729622 | Msa0774480:intron | 45.0% |
| !! | CATAATCAGGTTGGGGAAGT+AGG | + | chr5_2:50729693-50729712 | Msa0774480:CDS | 45.0% |
| GATTGTGGTGAGGAGCTTAT+TGG | + | chr5_2:50729723-50729742 | Msa0774480:CDS | 45.0% | |
| GAGCTTATTGGTGAGAGAAG+TGG | + | chr5_2:50729735-50729754 | Msa0774480:CDS | 45.0% | |
| AGAAGTGGAATGCCTGGATT+GGG | + | chr5_2:50729750-50729769 | Msa0774480:CDS | 45.0% | |
| GTGGAATTGAGGCTAGTGAA+GGG | + | chr5_2:50729796-50729815 | Msa0774480:CDS | 45.0% | |
| TGGAATTGAGGCTAGTGAAG+GGG | + | chr5_2:50729797-50729816 | Msa0774480:CDS | 45.0% | |
| ATATTCAGCTGGTTGCCAAG+TGG | + | chr5_2:50729937-50729956 | Msa0774480:CDS | 45.0% | |
| AAGAATCTGCTCGATCCACT+TGG | - | chr5_2:50729955-50729974 | None:intergenic | 45.0% | |
| !! | AATGGATTGTGCACCTTCAG+AGG | - | chr5_2:50730816-50730835 | None:intergenic | 45.0% |
| AGTCATTTCTGCGAACTTGC+AGG | + | chr5_2:50730901-50730920 | Msa0774480:intron | 45.0% | |
| ! | TGTTGGGTTAGGAGGTAACA+TGG | - | chr5_2:50731227-50731246 | None:intergenic | 45.0% |
| !! | TTGCATGCCAGAAAGGTGTT+GGG | - | chr5_2:50731243-50731262 | None:intergenic | 45.0% |
| ! | ATTGCATGCCAGAAAGGTGT+TGG | - | chr5_2:50731244-50731263 | None:intergenic | 45.0% |
| CACGATCTTGGTCAATGGTA+TGG | + | chr5_2:50731267-50731286 | Msa0774480:intron | 45.0% | |
| AAGCTATCCTGGAGAGCTTA+TGG | + | chr5_2:50731539-50731558 | Msa0774480:intron | 45.0% | |
| CCTAATTCCATAAGCTCTCC+AGG | - | chr5_2:50731549-50731568 | None:intergenic | 45.0% | |
| CCTGGAGAGCTTATGGAATT+AGG | + | chr5_2:50731546-50731565 | Msa0774480:intron | 45.0% | |
| CAAGGACTTGTGAGACTGTT+TGG | - | chr5_2:50731619-50731638 | None:intergenic | 45.0% | |
| CCGGGGTCTGTAATTATTAC+AGG | - | chr5_2:50731700-50731719 | None:intergenic | 45.0% | |
| CAAGTTGCATCTCAGTAGGT+GGG | + | chr5_2:50732189-50732208 | Msa0774480:intron | 45.0% | |
| AAGTTGCATCTCAGTAGGTG+GGG | + | chr5_2:50732190-50732209 | Msa0774480:intron | 45.0% | |
| GGTTGGATACATGGAACAGA+CGG | + | chr5_2:50732211-50732230 | Msa0774480:intron | 45.0% | |
| GTTGGATACATGGAACAGAC+GGG | + | chr5_2:50732212-50732231 | Msa0774480:intron | 45.0% | |
| ATGACGGCATCAACACTTAG+AGG | + | chr5_2:50732423-50732442 | Msa0774480:intron | 45.0% | |
| GCATCAACACTTAGAGGAGA+CGG | + | chr5_2:50732429-50732448 | Msa0774480:intron | 45.0% | |
| ! | GTCACTTTGTCGGATATCAC+AGG | - | chr5_2:50732490-50732509 | None:intergenic | 45.0% |
| ATTGATGCGGCAAGTTGCAA+TGG | + | chr5_2:50732948-50732967 | Msa0774480:CDS | 45.0% | |
| AGGTCATAATTTCCGTCGAC+AGG | + | chr5_2:50733011-50733030 | Msa0774480:CDS | 45.0% | |
| AAGAAAAACCGGTACCAGAC+TGG | - | chr5_2:50733180-50733199 | None:intergenic | 45.0% | |
| ! | TCTTTTCGTCACTGACCACA+GGG | + | chr5_2:50733220-50733239 | Msa0774480:CDS | 45.0% |
| GCTAACATCTGTGGTTGAGA+AGG | + | chr5_2:50733260-50733279 | Msa0774480:CDS | 45.0% | |
| AAAGTCCCTCTAATGCCATG+TGG | + | chr5_2:50733533-50733552 | Msa0774480:intron | 45.0% | |
| AAAATTGGGCAGGGAATGGA+GGG | - | chr5_2:50733579-50733598 | None:intergenic | 45.0% | |
| AAAAATTGGGCAGGGAATGG+AGG | - | chr5_2:50733580-50733599 | None:intergenic | 45.0% | |
| GCATATAGCACATAGGTCAC+CGG | - | chr5_2:50734620-50734639 | None:intergenic | 45.0% | |
| TAGGGGAATGCATCTTCTCT+TGG | - | chr5_2:50734642-50734661 | None:intergenic | 45.0% | |
| TTTGCAGCGCAACAAGATAG+GGG | - | chr5_2:50734659-50734678 | None:intergenic | 45.0% | |
| GTTTGCAGCGCAACAAGATA+GGG | - | chr5_2:50734660-50734679 | None:intergenic | 45.0% | |
| TGTTTGCAGCGCAACAAGAT+AGG | - | chr5_2:50734661-50734680 | None:intergenic | 45.0% | |
| ! | GCGAAGATTGTGTTTCTGAG+TGG | + | chr5_2:50734689-50734708 | Msa0774480:CDS | 45.0% |
| ATCGCACTGAGAGATATAGG+TGG | + | chr5_2:50735042-50735061 | Msa0774480:intron | 45.0% | |
| ! | AAGCCTTGTCACACTAAGTG+GGG | - | chr5_2:50735410-50735429 | None:intergenic | 45.0% |
| ! | CAAGCCTTGTCACACTAAGT+GGG | - | chr5_2:50735411-50735430 | None:intergenic | 45.0% |
| GATAAGGTTCCCTAGGTCTT+TGG | + | chr5_2:50735574-50735593 | Msa0774480:intron | 45.0% | |
| TGGCAATTGTCAACGACCAA+GGG | - | chr5_2:50735601-50735620 | None:intergenic | 45.0% | |
| ATGGCAATTGTCAACGACCA+AGG | - | chr5_2:50735602-50735621 | None:intergenic | 45.0% | |
| CCAACACCCAAGAATACTTC+AGG | - | chr5_2:50735687-50735706 | None:intergenic | 45.0% | |
| ! | CCTGAAGTATTCTTGGGTGT+TGG | + | chr5_2:50735684-50735703 | Msa0774480:intron | 45.0% |
| ! | GTGCAGTGGTGTTTGTTAGA+AGG | - | chr5_2:50735861-50735880 | None:intergenic | 45.0% |
| ! | CATGCCTAGTAAAAGTGCAG+TGG | - | chr5_2:50735875-50735894 | None:intergenic | 45.0% |
| CTAGGCATGAAGATGCTCTA+AGG | + | chr5_2:50735886-50735905 | Msa0774480:intron | 45.0% | |
| AACGTTAGCGTGACATGAAG+TGG | - | chr5_2:50736156-50736175 | None:intergenic | 45.0% | |
| GAACGAATCAAAGGATGGAC+TGG | - | chr5_2:50736209-50736228 | None:intergenic | 45.0% | |
| GGAGAGAAACGACAAGAAAG+GGG | - | chr5_2:50736244-50736263 | None:intergenic | 45.0% | |
| GAGGCAAAATCAGTAGTGAC+AGG | - | chr5_2:50736394-50736413 | None:intergenic | 45.0% | |
| ACTGAATCAGGATATCTCGG+AGG | - | chr5_2:50736413-50736432 | None:intergenic | 45.0% | |
| TGACTGCTGGAATCATGCAT+CGG | - | chr5_2:50736462-50736481 | None:intergenic | 45.0% | |
| AAAACAGTTCCGAACTGGCT+TGG | - | chr5_2:50736646-50736665 | None:intergenic | 45.0% | |
| CTTGCAAAACAGTTCCGAAC+TGG | - | chr5_2:50736651-50736670 | None:intergenic | 45.0% | |
| GAAACAGTACTTCTGAGCTC+TGG | - | chr5_2:50736774-50736793 | None:intergenic | 45.0% | |
| TAACCAATGCTCTGCATAGG+GGG | - | chr5_2:50737220-50737239 | None:intergenic | 45.0% | |
| ! | ACTTGTTGATCCATCTCCGA+AGG | - | chr5_2:50737261-50737280 | None:intergenic | 45.0% |
| GCTGAGATACTCAAAATCGG+GGG | + | chr5_2:50737332-50737351 | Msa0774480:three_prime_UTR | 45.0% | |
| ACGAGGAATATGAGGTTAGC+GGG | - | chr5_2:50737360-50737379 | None:intergenic | 45.0% | |
| GCAATTTCAGCACTTCCAAG+TGG | - | chr5_2:50737510-50737529 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTTTTTAAATTGTT+AGG | - | chr5_2:50736947-50736966 | None:intergenic | 5.0% |
| ! | TGGTTCGGAGTTACGATCTC+AGG | + | chr5_2:50729593-50729612 | Msa0774480:intron | 50.0% |
| GTGCAGGGGAAGTTGCAATA+AGG | + | chr5_2:50729646-50729665 | Msa0774480:CDS | 50.0% | |
| GAGAAGTGGAATGCCTGGAT+TGG | + | chr5_2:50729749-50729768 | Msa0774480:CDS | 50.0% | |
| GCATCATTCTCACCCAATCC+AGG | - | chr5_2:50729765-50729784 | None:intergenic | 50.0% | |
| ATTGGGTGAGAATGATGCCG+AGG | + | chr5_2:50729767-50729786 | Msa0774480:CDS | 50.0% | |
| TTGGGTGAGAATGATGCCGA+GGG | + | chr5_2:50729768-50729787 | Msa0774480:CDS | 50.0% | |
| GGTGGAATTGAGGCTAGTGA+AGG | + | chr5_2:50729795-50729814 | Msa0774480:CDS | 50.0% | |
| TTCATCTTCTTCGTCGTCGC+TGG | + | chr5_2:50729833-50729852 | Msa0774480:intron | 50.0% | |
| !! | TAGTGGACAGGTTGATGGTG+AGG | + | chr5_2:50729860-50729879 | Msa0774480:intron | 50.0% |
| !! | GCACTGACTTGCTTGTTCTG+AGG | + | chr5_2:50730242-50730261 | Msa0774480:intron | 50.0% |
| TGGTTGGATGTGCCTGCATT+TGG | + | chr5_2:50730285-50730304 | Msa0774480:intron | 50.0% | |
| GGTTGGATGTGCCTGCATTT+GGG | + | chr5_2:50730286-50730305 | Msa0774480:intron | 50.0% | |
| GTGCCTGCATTTGGGAATGA+TGG | + | chr5_2:50730294-50730313 | Msa0774480:intron | 50.0% | |
| AGCGTTATGGTACGAGGATG+AGG | - | chr5_2:50731073-50731092 | None:intergenic | 50.0% | |
| TCACTCAGCGTTATGGTACG+AGG | - | chr5_2:50731079-50731098 | None:intergenic | 50.0% | |
| TTAGGAGGTAACATGGCCAG+TGG | - | chr5_2:50731220-50731239 | None:intergenic | 50.0% | |
| !! | CAGAAAGGTGTTGGGTTAGG+AGG | - | chr5_2:50731235-50731254 | None:intergenic | 50.0% |
| CTCCTAACCCAACACCTTTC+TGG | + | chr5_2:50731233-50731252 | Msa0774480:CDS | 50.0% | |
| !! | TGCCAGAAAGGTGTTGGGTT+AGG | - | chr5_2:50731238-50731257 | None:intergenic | 50.0% |
| ATGCATTCAGCATCTCACCC+GGG | - | chr5_2:50731718-50731737 | None:intergenic | 50.0% | |
| CATGCATTCAGCATCTCACC+CGG | - | chr5_2:50731719-50731738 | None:intergenic | 50.0% | |
| ACGGCATCCTGTCTACACAT+AGG | - | chr5_2:50731877-50731896 | None:intergenic | 50.0% | |
| CCACCTACTGAGATGCAACT+TGG | - | chr5_2:50732191-50732210 | None:intergenic | 50.0% | |
| CCAAGTTGCATCTCAGTAGG+TGG | + | chr5_2:50732188-50732207 | Msa0774480:intron | 50.0% | |
| AGTAGGTGGGGTTGGATACA+TGG | + | chr5_2:50732202-50732221 | Msa0774480:intron | 50.0% | |
| AGGATCAGCCTTCTGGATGT+TGG | + | chr5_2:50732523-50732542 | Msa0774480:intron | 50.0% | |
| AGGTTCAGCCAACATCCAGA+AGG | - | chr5_2:50732534-50732553 | None:intergenic | 50.0% | |
| ! | CTCTTTTCGTCACTGACCAC+AGG | + | chr5_2:50733219-50733238 | Msa0774480:CDS | 50.0% |
| ! | CAGTTCCGTTGCTGTTGCAT+GGG | + | chr5_2:50733605-50733624 | Msa0774480:intron | 50.0% |
| ! | CATGTGTTATGCAAGGGTGC+TGG | + | chr5_2:50734383-50734402 | Msa0774480:intron | 50.0% |
| GAAACACAGGTTACTGCTGC+CGG | + | chr5_2:50734598-50734617 | Msa0774480:intron | 50.0% | |
| ! | TTTCCCATGGTGGAGAACTG+AGG | - | chr5_2:50735238-50735257 | None:intergenic | 50.0% |
| TCACACTAAGTGGGGACTTG+GGG | - | chr5_2:50735402-50735421 | None:intergenic | 50.0% | |
| GTCACACTAAGTGGGGACTT+GGG | - | chr5_2:50735403-50735422 | None:intergenic | 50.0% | |
| TGTCACACTAAGTGGGGACT+TGG | - | chr5_2:50735404-50735423 | None:intergenic | 50.0% | |
| AGTCCCCACTTAGTGTGACA+AGG | + | chr5_2:50735404-50735423 | Msa0774480:intron | 50.0% | |
| ! | CCAAGCCTTGTCACACTAAG+TGG | - | chr5_2:50735412-50735431 | None:intergenic | 50.0% |
| CCACTTAGTGTGACAAGGCT+TGG | + | chr5_2:50735409-50735428 | Msa0774480:intron | 50.0% | |
| ACCAAGGGTCCAAAGACCTA+GGG | - | chr5_2:50735586-50735605 | None:intergenic | 50.0% | |
| GGTCGTTGACAATTGCCATG+TGG | + | chr5_2:50735603-50735622 | Msa0774480:intron | 50.0% | |
| AGGTTCTCGACATCTCGTTG+AGG | + | chr5_2:50736332-50736351 | Msa0774480:intron | 50.0% | |
| TCGACATCTCGTTGAGGCTT+AGG | + | chr5_2:50736338-50736357 | Msa0774480:intron | 50.0% | |
| GACTGCTGGAATCATGCATC+GGG | - | chr5_2:50736461-50736480 | None:intergenic | 50.0% | |
| ! | CTACTACACTCACTGACTGC+TGG | - | chr5_2:50736475-50736494 | None:intergenic | 50.0% |
| !! | CGATCTCAGGTTGATGCTGG+TGG | + | chr5_2:50729606-50729625 | Msa0774480:intron | 55.0% |
| !! | ATGCTGGTGGTGCTGTTGCT+GGG | + | chr5_2:50729619-50729638 | Msa0774480:CDS | 55.0% |
| CTGTTGCTGGGAGTAGTGCA+GGG | + | chr5_2:50729631-50729650 | Msa0774480:CDS | 55.0% | |
| TGTTGCTGGGAGTAGTGCAG+GGG | + | chr5_2:50729632-50729651 | Msa0774480:CDS | 55.0% | |
| GGTGAGAGAAGTGGAATGCC+TGG | + | chr5_2:50729744-50729763 | Msa0774480:CDS | 55.0% | |
| CTCAATTCCACCACGACCCT+CGG | - | chr5_2:50729787-50729806 | None:intergenic | 55.0% | |
| !! | GCTGGTAGTGGACAGGTTGA+TGG | + | chr5_2:50729855-50729874 | Msa0774480:intron | 55.0% |
| !! | AGGTTGATGGTGAGGCTGCT+GGG | + | chr5_2:50729868-50729887 | Msa0774480:intron | 55.0% |
| TGCATTCAGCATCTCACCCG+GGG | - | chr5_2:50731717-50731736 | None:intergenic | 55.0% | |
| TGCATCTCAGTAGGTGGGGT+TGG | + | chr5_2:50732194-50732213 | Msa0774480:intron | 55.0% | |
| ACTTAGAGGAGACGGCTGAC+CGG | + | chr5_2:50732437-50732456 | Msa0774480:intron | 55.0% | |
| CCATCTAGCACAGTGTCCTC+CGG | - | chr5_2:50732459-50732478 | None:intergenic | 55.0% | |
| GAGGACACTGTGCTAGATGG+TGG | + | chr5_2:50732459-50732478 | Msa0774480:intron | 55.0% | |
| !! | CCAGACTGGTGTTGGCAACA+AGG | - | chr5_2:50733166-50733185 | None:intergenic | 55.0% |
| CCTTGTTGCCAACACCAGTC+TGG | + | chr5_2:50733163-50733182 | Msa0774480:CDS | 55.0% | |
| TGCCAACACCAGTCTGGTAC+CGG | + | chr5_2:50733169-50733188 | Msa0774480:CDS | 55.0% | |
| AACCGGTACCAGACTGGTGT+TGG | - | chr5_2:50733174-50733193 | None:intergenic | 55.0% | |
| GGTCTATGCCACAGCAGAAC+AGG | + | chr5_2:50733431-50733450 | Msa0774480:CDS | 55.0% | |
| CCATGCAACAGCAACGGAAC+TGG | - | chr5_2:50733607-50733626 | None:intergenic | 55.0% | |
| ! | CCAGTTCCGTTGCTGTTGCA+TGG | + | chr5_2:50733604-50733623 | Msa0774480:intron | 55.0% |
| ATGGCCTCAGTTCTCCACCA+TGG | + | chr5_2:50735231-50735250 | Msa0774480:intron | 55.0% | |
| TGGCCTCAGTTCTCCACCAT+GGG | + | chr5_2:50735232-50735251 | Msa0774480:intron | 55.0% | |
| ACTAAGTGGGGACTTGGGGT+CGG | - | chr5_2:50735398-50735417 | None:intergenic | 55.0% | |
| TCCCTAGGTCTTTGGACCCT+TGG | + | chr5_2:50735582-50735601 | Msa0774480:intron | 55.0% | |
| GACCAAGGGTCCAAAGACCT+AGG | - | chr5_2:50735587-50735606 | None:intergenic | 55.0% | |
| !! | TGGACTGGCACCAACGAGAA+AGG | - | chr5_2:50736194-50736213 | None:intergenic | 55.0% |
| TTCTGCAAGTGCAGAGCCCT+TGG | - | chr5_2:50736265-50736284 | None:intergenic | 55.0% | |
| TGCTCAGAGCTGCTTCTCGT+TGG | - | chr5_2:50736366-50736385 | None:intergenic | 55.0% | |
| GAACTGGGACCAAGCCAGTT+CGG | + | chr5_2:50736634-50736653 | Msa0774480:intron | 55.0% | |
| TTGCCCCCTATGCAGAGCAT+TGG | + | chr5_2:50737214-50737233 | Msa0774480:CDS | 55.0% | |
| GCAGCTGATCTTCGCACCTT+CGG | + | chr5_2:50737242-50737261 | Msa0774480:CDS | 55.0% | |
| GATCTTCGCACCTTCGGAGA+TGG | + | chr5_2:50737248-50737267 | Msa0774480:CDS | 55.0% | |
| !! | GATGCTGGTGGTGCTGTTGC+TGG | + | chr5_2:50729618-50729637 | Msa0774480:CDS | 60.0% |
| GCTGTTGCTGGGAGTAGTGC+AGG | + | chr5_2:50729630-50729649 | Msa0774480:CDS | 60.0% | |
| GAGAATGATGCCGAGGGTCG+TGG | + | chr5_2:50729774-50729793 | Msa0774480:CDS | 60.0% | |
| AATGATGCCGAGGGTCGTGG+TGG | + | chr5_2:50729777-50729796 | Msa0774480:CDS | 60.0% | |
| ! | CGAGGGTCGTGGTGGAATTG+AGG | + | chr5_2:50729785-50729804 | Msa0774480:CDS | 60.0% |
| TCTTCTTCGTCGTCGCTGGC+TGG | + | chr5_2:50729837-50729856 | Msa0774480:intron | 60.0% | |
| !! | CAGGTTGATGGTGAGGCTGC+TGG | + | chr5_2:50729867-50729886 | Msa0774480:intron | 60.0% |
| GATGGTGAGGCTGCTGGGAA+TGG | + | chr5_2:50729873-50729892 | Msa0774480:CDS | 60.0% | |
| CCGGAGGACACTGTGCTAGA+TGG | + | chr5_2:50732456-50732475 | Msa0774480:intron | 60.0% | |
| GCATCGGGATATCCCTCCAC+TGG | - | chr5_2:50736446-50736465 | None:intergenic | 60.0% | |
| ! | TCGTCGTCGCTGGCTGGTAG+TGG | + | chr5_2:50729843-50729862 | Msa0774480:intron | 65.0% |
| !! | GTCGCTGGCTGGTAGTGGAC+AGG | + | chr5_2:50729848-50729867 | Msa0774480:intron | 65.0% |
| TAGAGGAGACGGCTGACCGG+AGG | + | chr5_2:50732440-50732459 | Msa0774480:intron | 65.0% | |
| GGGACTTGGGGTCGGCTACA+TGG | - | chr5_2:50735390-50735409 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 50729363 | 50737585 | 50729363 | ID=Msa0774480;Name=Msa0774480 |
| chr5_2 | mRNA | 50729363 | 50737585 | 50729363 | ID=Msa0774480-mRNA-1;Parent=Msa0774480;Name=Msa0774480-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.77|0.7|1|0.66|0.7|10|284|458 |
| chr5_2 | exon | 50729363 | 50729587 | 50729363 | ID=Msa0774480-mRNA-1:exon:15085;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50729615 | 50729827 | 50729615 | ID=Msa0774480-mRNA-1:exon:15086;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50729870 | 50730023 | 50729870 | ID=Msa0774480-mRNA-1:exon:15087;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50730923 | 50730999 | 50730923 | ID=Msa0774480-mRNA-1:exon:15088;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50731118 | 50731283 | 50731118 | ID=Msa0774480-mRNA-1:exon:15089;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50732944 | 50733032 | 50732944 | ID=Msa0774480-mRNA-1:exon:15090;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50733117 | 50733281 | 50733117 | ID=Msa0774480-mRNA-1:exon:15091;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50733375 | 50733452 | 50733375 | ID=Msa0774480-mRNA-1:exon:15092;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50734607 | 50734710 | 50734607 | ID=Msa0774480-mRNA-1:exon:15093;Parent=Msa0774480-mRNA-1 |
| chr5_2 | exon | 50737196 | 50737585 | 50737196 | ID=Msa0774480-mRNA-1:exon:15094;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50729363 | 50729587 | 50729363 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50729615 | 50729827 | 50729615 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50729870 | 50730023 | 50729870 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50730923 | 50730999 | 50730923 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50731118 | 50731283 | 50731118 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50732944 | 50733032 | 50732944 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50733117 | 50733281 | 50733117 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50733375 | 50733452 | 50733375 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50734607 | 50734710 | 50734607 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | CDS | 50737196 | 50737301 | 50737196 | ID=Msa0774480-mRNA-1:cds;Parent=Msa0774480-mRNA-1 |
| chr5_2 | three_prime_UTR | 50737302 | 50737585 | 50737302 | ID=Msa0774480-mRNA-1:three_prime_utr;Parent=Msa0774480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
