Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852280 | AES98422.1 | 98.545 | 481 | 7 | 0 | 1 | 481 | 1 | 481 | 0.0 | 977 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852280 | sp|Q96EX2|RNFT2_HUMAN | 29.231 | 325 | 209 | 7 | 169 | 481 | 129 | 444 | 6.09e-41 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852280 | G7KDC0 | 98.545 | 481 | 7 | 0 | 1 | 481 | 1 | 481 | 0.0 | 977 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0774480 | Msa0852280 | 0.945089 | 5.854968e-104 | -8.615850e-47 |
| Msa0808090 | Msa0852280 | 0.833240 | 5.973618e-56 | -8.615850e-47 |
| Msa0475040 | Msa0852280 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852280 | MtrunA17_Chr5g0428621 | 98.545 | 481 | 7 | 0 | 1 | 481 | 1 | 481 | 0.0 | 977 |
| Msa0852280 | MtrunA17_Chr7g0245321 | 62.222 | 450 | 127 | 8 | 38 | 481 | 14 | 426 | 0.0 | 516 |
| Msa0852280 | MtrunA17_Chr3g0128531 | 72.297 | 296 | 81 | 1 | 186 | 480 | 57 | 352 | 4.81e-154 | 442 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852280 | AT5G01960.1 | 62.443 | 442 | 121 | 9 | 45 | 481 | 25 | 426 | 0.0 | 537 |
Find 157 sgRNAs with CRISPR-Local
Find 575 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAACTAATTGCTAATTT+TGG | 0.071152 | 5_4:-43245714 | None:intergenic |
| AATGAAGGAATTATGGAAAT+TGG | 0.123089 | 5_4:-43245493 | None:intergenic |
| CTCCTAACCCAACACCTTTC+TGG | 0.136413 | 5_4:+43247694 | Msa0852280:CDS |
| TATACAAACTTCAAAGAAAT+TGG | 0.149391 | 5_4:-43253829 | None:intergenic |
| AACTCATGATGTACAAATTA+AGG | 0.154216 | 5_4:+43253692 | Msa0852280:three_prime_UTR |
| ATTGTCAACAACGGAGTTTC+TGG | 0.171090 | 5_4:+43246023 | Msa0852280:CDS |
| GATGCTGGTGGTGCTGTTGC+TGG | 0.216559 | 5_4:+43246068 | Msa0852280:CDS |
| ATTATGGAAATTGGGGAAAA+TGG | 0.219306 | 5_4:-43245484 | None:intergenic |
| CCTTCTTATATATTACAAAA+AGG | 0.220636 | 5_4:+43249446 | Msa0852280:CDS |
| CAGGTTTCTTTGTCACAATT+TGG | 0.224870 | 5_4:+43247381 | Msa0852280:intron |
| AGCGATTAATGAAGGAATTA+TGG | 0.235365 | 5_4:-43245500 | None:intergenic |
| AATTGGGGAAAATGGAAAAT+AGG | 0.253447 | 5_4:-43245476 | None:intergenic |
| TAGTGGAAGATCAAAGAAAT+AGG | 0.254643 | 5_4:+43245736 | Msa0852280:five_prime_UTR |
| AAGGGAGTGAATAGCTTTAT+AGG | 0.258642 | 5_4:-43245545 | None:intergenic |
| AAACGAAATCGGTGACAAAA+AGG | 0.259302 | 5_4:-43245949 | None:intergenic |
| ATAGGTTACCTGAGAGCTTA+TGG | 0.282402 | 5_4:-43245527 | None:intergenic |
| ATGAAGGAATTATGGAAATT+GGG | 0.285242 | 5_4:-43245492 | None:intergenic |
| GAAGTTGCAATAAGGATTAT+TGG | 0.287712 | 5_4:+43246104 | Msa0852280:CDS |
| TTCATGTGATATGCATTTAC+TGG | 0.295179 | 5_4:+43247628 | Msa0852280:CDS |
| AGAGTGAAGAATTGAGGATT+AGG | 0.296016 | 5_4:+43245762 | Msa0852280:five_prime_UTR |
| GCATCGTCATCATCATCTTT+TGG | 0.299559 | 5_4:+43245861 | Msa0852280:CDS |
| GAGTGAAGAATTGAGGATTA+GGG | 0.329208 | 5_4:+43245763 | Msa0852280:five_prime_UTR |
| GATGATGAAAAGTCAGAATC+AGG | 0.334693 | 5_4:-43245423 | None:intergenic |
| TGTTTGCAGCGCAACAAGAT+AGG | 0.343260 | 5_4:-43250967 | None:intergenic |
| GGAATGGAACAGAAAATAAC+AGG | 0.357993 | 5_4:+43246339 | Msa0852280:CDS |
| CTTTCTTGATAATGCTTTCA+AGG | 0.360532 | 5_4:-43249856 | None:intergenic |
| TTCATCTTCTTCGTCGTCGC+TGG | 0.362832 | 5_4:+43246283 | Msa0852280:CDS |
| GATTGTGGTGAGGAGCTTAT+TGG | 0.382139 | 5_4:+43246173 | Msa0852280:CDS |
| GCTGTTGCTGGGAGTAGTGC+AGG | 0.386572 | 5_4:+43246080 | Msa0852280:CDS |
| TGTGTTAAAGATGGAAACTT+TGG | 0.389515 | 5_4:+43245803 | Msa0852280:exon |
| CGGAGAGAATATTCATAATC+AGG | 0.390914 | 5_4:+43246130 | Msa0852280:CDS |
| ACTCATGATGTACAAATTAA+GGG | 0.395875 | 5_4:+43253693 | Msa0852280:three_prime_UTR |
| ATTAGCAATTAGTTGAATAG+TGG | 0.396695 | 5_4:+43245719 | Msa0852280:five_prime_UTR |
| TCAAGAAAGGAAGTTCATTA+CGG | 0.399518 | 5_4:+43249870 | Msa0852280:CDS |
| CAGGTTGATGGTGAGGCTGC+TGG | 0.403813 | 5_4:+43246317 | Msa0852280:CDS |
| AGAATATTCATAATCAGGTT+GGG | 0.404440 | 5_4:+43246135 | Msa0852280:CDS |
| CAAGAAAGGAAGTTCATTAC+GGG | 0.406319 | 5_4:+43249871 | Msa0852280:CDS |
| TAAGAAGCAGACAGCTTTGA+AGG | 0.417319 | 5_4:+43247439 | Msa0852280:CDS |
| ATTGGGGAAAATGGAAAATA+GGG | 0.417429 | 5_4:-43245475 | None:intergenic |
| CATGAGTTGATTAAAACAAC+TGG | 0.418322 | 5_4:-43253677 | None:intergenic |
| ATGCTGGTGGTGCTGTTGCT+GGG | 0.418694 | 5_4:+43246069 | Msa0852280:CDS |
| GTGCAGGGGAAGTTGCAATA+AGG | 0.423075 | 5_4:+43246096 | Msa0852280:CDS |
| TTGCTGAGATACTCAAAATC+GGG | 0.423104 | 5_4:+43253718 | Msa0852280:three_prime_UTR |
| CATAATCAGGTTGGGGAAGT+AGG | 0.423930 | 5_4:+43246143 | Msa0852280:CDS |
| AGGAAAGTCTCTTTACTTGC+TGG | 0.427377 | 5_4:+43247585 | Msa0852280:CDS |
| TGGTTCGGAGTTACGATCTC+AGG | 0.429413 | 5_4:+43246043 | Msa0852280:CDS |
| GCATGCAATATTCACGATCT+TGG | 0.434284 | 5_4:+43247716 | Msa0852280:CDS |
| TATTCAGGTTTGAGAGAGAA+AGG | 0.435355 | 5_4:+43253577 | Msa0852280:intron |
| GGTCTATGCCACAGCAGAAC+AGG | 0.437050 | 5_4:+43249893 | Msa0852280:CDS |
| CGCTTAATCCATAAGCTCTC+AGG | 0.441894 | 5_4:+43245519 | Msa0852280:five_prime_UTR |
| TCTTCTTCGTCGTCGCTGGC+TGG | 0.443041 | 5_4:+43246287 | Msa0852280:CDS |
| ATACAAACTTCAAAGAAATT+GGG | 0.447841 | 5_4:-43253828 | None:intergenic |
| GCTGGTAGTGGACAGGTTGA+TGG | 0.451925 | 5_4:+43246305 | Msa0852280:CDS |
| TTTGCTGAGATACTCAAAAT+CGG | 0.452012 | 5_4:+43253717 | Msa0852280:three_prime_UTR |
| GAGAATGATGCCGAGGGTCG+TGG | 0.454511 | 5_4:+43246224 | Msa0852280:CDS |
| GATGGTGAGGCTGCTGGGAA+TGG | 0.455118 | 5_4:+43246323 | Msa0852280:CDS |
| TCGTCGTCGCTGGCTGGTAG+TGG | 0.456677 | 5_4:+43246293 | Msa0852280:CDS |
| ACCAACAACAAAAGCGAGAA+AGG | 0.457541 | 5_4:-43246425 | None:intergenic |
| GCAGCTGATCTTCGCACCTT+CGG | 0.460469 | 5_4:+43253630 | Msa0852280:CDS |
| TGAAGGAATTATGGAAATTG+GGG | 0.463249 | 5_4:-43245491 | None:intergenic |
| TGCCAGAAAGGTGTTGGGTT+AGG | 0.468923 | 5_4:-43247696 | None:intergenic |
| TTCATTCGACAGCATTTACA+AGG | 0.471120 | 5_4:+43246452 | Msa0852280:CDS |
| GAGAATATTCATAATCAGGT+TGG | 0.471723 | 5_4:+43246134 | Msa0852280:CDS |
| TTTAACCAATGCTCTGCATA+GGG | 0.474317 | 5_4:-43253607 | None:intergenic |
| AGTGGAAGATCAAAGAAATA+GGG | 0.481606 | 5_4:+43245737 | Msa0852280:five_prime_UTR |
| ATGGATTAAGCGATTAATGA+AGG | 0.483411 | 5_4:-43245508 | None:intergenic |
| GTGTTAAAGATGGAAACTTT+GGG | 0.484629 | 5_4:+43245804 | Msa0852280:exon |
| CAACAACGGAGTTTCTGGTT+CGG | 0.487455 | 5_4:+43246028 | Msa0852280:CDS |
| ACACGCTCAACACTCTCAAA+AGG | 0.487468 | 5_4:+43245381 | Msa0852280:five_prime_UTR |
| GTCGCTGGCTGGTAGTGGAC+AGG | 0.489319 | 5_4:+43246298 | Msa0852280:CDS |
| GAATCAGGGAGCTGAAAACT+TGG | 0.490952 | 5_4:-43245408 | None:intergenic |
| CTTGAAAGCATTATCAAGAA+AGG | 0.491166 | 5_4:+43249857 | Msa0852280:CDS |
| GATCTTCGCACCTTCGGAGA+TGG | 0.496054 | 5_4:+43253636 | Msa0852280:CDS |
| TAGGGGAATGCATCTTCTCT+TGG | 0.502312 | 5_4:-43250948 | None:intergenic |
| CTCAATTCCACCACGACCCT+CGG | 0.503303 | 5_4:-43246234 | None:intergenic |
| AATGGTGGTGTAACTTGGTA+TGG | 0.506979 | 5_4:+43245906 | Msa0852280:CDS |
| TCTATTATACGAGGAATATG+AGG | 0.507944 | 5_4:-43253753 | None:intergenic |
| AGGTTGATGGTGAGGCTGCT+GGG | 0.510435 | 5_4:+43246318 | Msa0852280:CDS |
| CCTTGTTGCCAACACCAGTC+TGG | 0.511066 | 5_4:+43249625 | Msa0852280:CDS |
| CTTTAACCAATGCTCTGCAT+AGG | 0.512609 | 5_4:-43253608 | None:intergenic |
| TGCCAACACCAGTCTGGTAC+CGG | 0.512850 | 5_4:+43249631 | Msa0852280:CDS |
| ATTGCATGCCAGAAAGGTGT+TGG | 0.514467 | 5_4:-43247702 | None:intergenic |
| GTGAATATTGCATGCCAGAA+AGG | 0.515806 | 5_4:-43247708 | None:intergenic |
| ATATATTAAGTTGTTCCACT+TGG | 0.515832 | 5_4:+43253876 | Msa0852280:three_prime_UTR |
| ACGAGGAATATGAGGTTAGC+GGG | 0.516794 | 5_4:-43253745 | None:intergenic |
| GAGAAGTGGAATGCCTGGAT+TGG | 0.516962 | 5_4:+43246199 | Msa0852280:CDS |
| AGGTCATAATTTCCGTCGAC+AGG | 0.520503 | 5_4:+43249473 | Msa0852280:CDS |
| TTGCATGCCAGAAAGGTGTT+GGG | 0.523282 | 5_4:-43247701 | None:intergenic |
| GTTTGCAGCGCAACAAGATA+GGG | 0.523423 | 5_4:-43250966 | None:intergenic |
| GCATCATTCTCACCCAATCC+AGG | 0.524005 | 5_4:-43246212 | None:intergenic |
| AGGGTTAGAGTGAAGAATTG+AGG | 0.526874 | 5_4:+43245756 | Msa0852280:five_prime_UTR |
| GAGCTTATTGGTGAGAGAAG+TGG | 0.528069 | 5_4:+43246185 | Msa0852280:CDS |
| CAGAAAGGTGTTGGGTTAGG+AGG | 0.529451 | 5_4:-43247693 | None:intergenic |
| CGAGGGTCGTGGTGGAATTG+AGG | 0.530269 | 5_4:+43246235 | Msa0852280:CDS |
| TTACGATCTCAGGTTGATGC+TGG | 0.530975 | 5_4:+43246053 | Msa0852280:CDS |
| CTGATTATGAATATTCTCTC+CGG | 0.531233 | 5_4:-43246129 | None:intergenic |
| CTGTTGCTGGGAGTAGTGCA+GGG | 0.533694 | 5_4:+43246081 | Msa0852280:CDS |
| AGAAGTGGAATGCCTGGATT+GGG | 0.538975 | 5_4:+43246200 | Msa0852280:CDS |
| ATATTCACGATCTTGGTCAA+TGG | 0.547880 | 5_4:+43247723 | Msa0852280:CDS |
| CCAGACTGGTGTTGGCAACA+AGG | 0.550659 | 5_4:-43249625 | None:intergenic |
| GCTAACATCTGTGGTTGAGA+AGG | 0.553972 | 5_4:+43249722 | Msa0852280:CDS |
| AACCGGTACCAGACTGGTGT+TGG | 0.555615 | 5_4:-43249633 | None:intergenic |
| ATTGATGCGGCAAGTTGCAA+TGG | 0.559389 | 5_4:+43249410 | Msa0852280:CDS |
| GCAATAAGGATTATTGGAGC+CGG | 0.561386 | 5_4:+43246110 | Msa0852280:CDS |
| GGTGAGAGAAGTGGAATGCC+TGG | 0.561452 | 5_4:+43246194 | Msa0852280:CDS |
| ATAACAATGGTGGTGTAACT+TGG | 0.562068 | 5_4:+43245901 | Msa0852280:CDS |
| AACTTTCAAGCTAACATCTG+TGG | 0.566297 | 5_4:+43249713 | Msa0852280:CDS |
| GAATATTCATAATCAGGTTG+GGG | 0.568125 | 5_4:+43246136 | Msa0852280:CDS |
| TCAAGGCAGAAATAAAGCAT+TGG | 0.568202 | 5_4:-43249839 | None:intergenic |
| TAACCAATGCTCTGCATAGG+GGG | 0.573244 | 5_4:-43253605 | None:intergenic |
| GTGTAACTTGGTATGGAATG+AGG | 0.578063 | 5_4:+43245913 | Msa0852280:CDS |
| AAGAATCTGCTCGATCCACT+TGG | 0.579271 | 5_4:-43246402 | None:intergenic |
| TACGAGGAATATGAGGTTAG+CGG | 0.579546 | 5_4:-43253746 | None:intergenic |
| GAAACACAGGTTACTGCTGC+CGG | 0.586657 | 5_4:+43250907 | Msa0852280:intron |
| TCAGAGATATGATATTCAGC+TGG | 0.589785 | 5_4:+43246376 | Msa0852280:CDS |
| GTGGAATTGAGGCTAGTGAA+GGG | 0.589870 | 5_4:+43246246 | Msa0852280:CDS |
| TGCTGAGATACTCAAAATCG+GGG | 0.592550 | 5_4:+43253719 | Msa0852280:three_prime_UTR |
| GTTGTTGACAATCATACCCT+CGG | 0.609232 | 5_4:-43246012 | None:intergenic |
| GCATATAGCACATAGGTCAC+CGG | 0.609774 | 5_4:-43250926 | None:intergenic |
| GAAGAAGATGAAGACACAAG+AGG | 0.611695 | 5_4:-43246272 | None:intergenic |
| AATTATTACCTGTTCTGCTG+TGG | 0.619122 | 5_4:-43249901 | None:intergenic |
| GCGTTCGAGTAATGATTCCG+AGG | 0.620565 | 5_4:+43245995 | Msa0852280:CDS |
| CGATCTCAGGTTGATGCTGG+TGG | 0.621120 | 5_4:+43246056 | Msa0852280:CDS |
| ATGATGAAAAGTCAGAATCA+GGG | 0.622226 | 5_4:-43245422 | None:intergenic |
| GGTGGAATTGAGGCTAGTGA+AGG | 0.624331 | 5_4:+43246245 | Msa0852280:CDS |
| TCTCTTGGCATATAGCACAT+AGG | 0.625613 | 5_4:-43250933 | None:intergenic |
| CGTTCGAGTAATGATTCCGA+GGG | 0.626204 | 5_4:+43245996 | Msa0852280:CDS |
| GACTATCAGATATATTGATG+CGG | 0.630026 | 5_4:+43249397 | Msa0852280:intron |
| ACTTGTTGATCCATCTCCGA+AGG | 0.630497 | 5_4:-43253646 | None:intergenic |
| TAGTGGACAGGTTGATGGTG+AGG | 0.631621 | 5_4:+43246310 | Msa0852280:CDS |
| TGTTGGGTTAGGAGGTAACA+TGG | 0.635457 | 5_4:-43247685 | None:intergenic |
| ATGTGATATGCATTTACTGG+TGG | 0.637599 | 5_4:+43247631 | Msa0852280:CDS |
| TTTGCAGCGCAACAAGATAG+GGG | 0.638343 | 5_4:-43250965 | None:intergenic |
| GACGATGCTGATGATAATGA+TGG | 0.640183 | 5_4:-43245846 | None:intergenic |
| AATTTGAAGTGAATTAACAA+TGG | 0.644707 | 5_4:-43245447 | None:intergenic |
| GCAATTTCAGCACGTCCAAG+TGG | 0.648477 | 5_4:-43253891 | None:intergenic |
| AAGTGTTAATCACCTGTCGA+CGG | 0.651807 | 5_4:-43249485 | None:intergenic |
| TTAGGAGGTAACATGGCCAG+TGG | 0.655245 | 5_4:-43247678 | None:intergenic |
| ATTAATACTGATGATAACAA+TGG | 0.655907 | 5_4:+43245888 | Msa0852280:CDS |
| GCGAAGATTGTGTTTCTGAG+TGG | 0.661411 | 5_4:+43250998 | Msa0852280:CDS |
| TGGAATTGAGGCTAGTGAAG+GGG | 0.668643 | 5_4:+43246247 | Msa0852280:CDS |
| TTAACCAATGCTCTGCATAG+GGG | 0.669529 | 5_4:-43253606 | None:intergenic |
| AGGTTATGATGATTGTGGTG+AGG | 0.674430 | 5_4:+43246163 | Msa0852280:CDS |
| AATGATGCCGAGGGTCGTGG+TGG | 0.676790 | 5_4:+43246227 | Msa0852280:CDS |
| TGTTGCTGGGAGTAGTGCAG+GGG | 0.681680 | 5_4:+43246082 | Msa0852280:CDS |
| ATATTCAGCTGGTTGCCAAG+TGG | 0.681905 | 5_4:+43246387 | Msa0852280:CDS |
| TTGGGTGAGAATGATGCCGA+GGG | 0.685926 | 5_4:+43246218 | Msa0852280:CDS |
| GCTGAGATACTCAAAATCGG+GGG | 0.694163 | 5_4:+43253720 | Msa0852280:three_prime_UTR |
| ATTGGGTGAGAATGATGCCG+AGG | 0.696716 | 5_4:+43246217 | Msa0852280:CDS |
| GAAGTAGGTTATGATGATTG+TGG | 0.698058 | 5_4:+43246158 | Msa0852280:CDS |
| TTAAAGATGGAAACTTTGGG+TGG | 0.712597 | 5_4:+43245807 | Msa0852280:exon |
| GAAAGTTAAATACAACCCTG+TGG | 0.717765 | 5_4:-43249697 | None:intergenic |
| GAATGGAACAGAAAATAACA+GGG | 0.719617 | 5_4:+43246340 | Msa0852280:CDS |
| AAGAAAGGAAGTTCATTACG+GGG | 0.731505 | 5_4:+43249872 | Msa0852280:CDS |
| ATCATACTATCTATTATACG+AGG | 0.737073 | 5_4:-43253762 | None:intergenic |
| AATACTGATGATAACAATGG+TGG | 0.742919 | 5_4:+43245891 | Msa0852280:CDS |
| GAGGGTATGATTGTCAACAA+CGG | 0.758318 | 5_4:+43246014 | Msa0852280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAGAATAGAAATTTTAA+AGG | - | chr5_4:43247489-43247508 | None:intergenic | 10.0% |
| !! | ATGAAATAGTAAATAATTAA+AGG | + | chr5_4:43251375-43251394 | Msa0852280:intron | 10.0% |
| !!! | AAACTATTTTTCTAAAATAA+TGG | + | chr5_4:43252983-43253002 | Msa0852280:intron | 10.0% |
| !! | TAGAATTGAAAAAAATTGAA+GGG | - | chr5_4:43245566-43245585 | None:intergenic | 15.0% |
| !! | ATAGAATTGAAAAAAATTGA+AGG | - | chr5_4:43245567-43245586 | None:intergenic | 15.0% |
| !!! | TTTTTAATTTGTGTTAAAGA+TGG | + | chr5_4:43245794-43245813 | Msa0852280:exon | 15.0% |
| !! | AAATAAAGGAAAATTCAAAA+TGG | - | chr5_4:43246582-43246601 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTCTTGATATTT+GGG | - | chr5_4:43246635-43246654 | None:intergenic | 15.0% |
| !!! | AATATACTGTATTTTTATCT+TGG | + | chr5_4:43249280-43249299 | Msa0852280:intron | 15.0% |
| !! | CTTCTTATATATTACAAAAA+GGG | + | chr5_4:43249447-43249466 | Msa0852280:CDS | 15.0% |
| !! | TTCTTATATATTACAAAAAG+GGG | + | chr5_4:43249448-43249467 | Msa0852280:CDS | 15.0% |
| !! | TTAATATTATAGAAATCGAA+TGG | - | chr5_4:43249979-43249998 | None:intergenic | 15.0% |
| !!! | TTTTATAGTTACACAAATTA+TGG | + | chr5_4:43250381-43250400 | Msa0852280:intron | 15.0% |
| !! | TTAGAAGTAATAAAATTGAT+CGG | + | chr5_4:43251426-43251445 | Msa0852280:intron | 15.0% |
| !!! | AATAGTTATTATTTTGTTTG+TGG | + | chr5_4:43251503-43251522 | Msa0852280:intron | 15.0% |
| !!! | ATAGTTATTATTTTGTTTGT+GGG | + | chr5_4:43251504-43251523 | Msa0852280:intron | 15.0% |
| !! | TTTAATATCAAATGTAAGAA+TGG | + | chr5_4:43251848-43251867 | Msa0852280:intron | 15.0% |
| !! | AATTCTTAAATTAAGATTCT+TGG | + | chr5_4:43252130-43252149 | Msa0852280:intron | 15.0% |
| !!! | GTTTTTAAGCAAAATAAATT+GGG | - | chr5_4:43252337-43252356 | None:intergenic | 15.0% |
| !!! | AGTTTTTAAGCAAAATAAAT+TGG | - | chr5_4:43252338-43252357 | None:intergenic | 15.0% |
| !!! | TATTTCCAGTTTTAATTAAA+TGG | - | chr5_4:43252370-43252389 | None:intergenic | 15.0% |
| !!! | ATTTTTCTAAAATAATGGTT+TGG | + | chr5_4:43252988-43253007 | Msa0852280:intron | 15.0% |
| !! | TCCAAATTTCTTATAAAAAT+AGG | - | chr5_4:43253916-43253935 | None:intergenic | 15.0% |
| !!! | TTTTATAAGAAATTTGGATT+TGG | + | chr5_4:43253918-43253937 | Msa0852280:three_prime_UTR | 15.0% |
| !!! | AATTTGAAGTGAATTAACAA+TGG | - | chr5_4:43245450-43245469 | None:intergenic | 20.0% |
| !!! | TTCAACTAATTGCTAATTTT+GGG | - | chr5_4:43245716-43245735 | None:intergenic | 20.0% |
| !!! | ATTCAACTAATTGCTAATTT+TGG | - | chr5_4:43245717-43245736 | None:intergenic | 20.0% |
| !! | ATTAATACTGATGATAACAA+TGG | + | chr5_4:43245888-43245907 | Msa0852280:CDS | 20.0% |
| !! | TATGATCATTATGATCATAT+TGG | - | chr5_4:43246558-43246577 | None:intergenic | 20.0% |
| !! | AACAATGGAAAAGTAAATAA+AGG | - | chr5_4:43246596-43246615 | None:intergenic | 20.0% |
| !!! | CTTTGTATTTTCTTGATATT+TGG | - | chr5_4:43246636-43246655 | None:intergenic | 20.0% |
| !! | TCAATGAAAAACATTTAACA+AGG | - | chr5_4:43246847-43246866 | None:intergenic | 20.0% |
| !! | AGAATCAGTAAATAAAACAA+AGG | - | chr5_4:43247001-43247020 | None:intergenic | 20.0% |
| !!! | GAATAGAAATTTTAAAGGTT+TGG | - | chr5_4:43247484-43247503 | None:intergenic | 20.0% |
| !!! | TGAAATATGTTTTATTTTGC+AGG | + | chr5_4:43247557-43247576 | Msa0852280:intron | 20.0% |
| !!! | GAAATATGTTTTATTTTGCA+GGG | + | chr5_4:43247558-43247577 | Msa0852280:intron | 20.0% |
| !! | TCCAAGTTTAATTATCAATT+GGG | + | chr5_4:43248369-43248388 | Msa0852280:intron | 20.0% |
| !! | TTTATACGTCTAAGAAAAAT+TGG | + | chr5_4:43248480-43248499 | Msa0852280:intron | 20.0% |
| !! | TTATACGTCTAAGAAAAATT+GGG | + | chr5_4:43248481-43248500 | Msa0852280:intron | 20.0% |
| !!! | TCAAAAACCTATGTTTTTTA+AGG | - | chr5_4:43249016-43249035 | None:intergenic | 20.0% |
| !! | ATTAGTATTCCTTCTTAAAT+TGG | - | chr5_4:43249056-43249075 | None:intergenic | 20.0% |
| !! | AATACCAACAAAAATTAGAA+TGG | - | chr5_4:43249359-43249378 | None:intergenic | 20.0% |
| !! | ATATCTGATAGTCAATATAA+TGG | - | chr5_4:43249390-43249409 | None:intergenic | 20.0% |
| !!! | CCTTTTTGTAATATATAAGA+AGG | - | chr5_4:43249449-43249468 | None:intergenic | 20.0% |
| !! | CCTTCTTATATATTACAAAA+AGG | + | chr5_4:43249446-43249465 | Msa0852280:CDS | 20.0% |
| !! | GATATATTTATATACACTGT+TGG | - | chr5_4:43249957-43249976 | None:intergenic | 20.0% |
| !! | TATTATCCTCAAAATTAGAT+AGG | + | chr5_4:43250591-43250610 | Msa0852280:intron | 20.0% |
| !!! | TATTTTCCTATCTAATTTTG+AGG | - | chr5_4:43250600-43250619 | None:intergenic | 20.0% |
| !!! | CCTTTTTAGTAATTGTTTTA+AGG | - | chr5_4:43251474-43251493 | None:intergenic | 20.0% |
| !! | CCTTAAAACAATTACTAAAA+AGG | + | chr5_4:43251471-43251490 | Msa0852280:intron | 20.0% |
| !! | ATGCATAATAAGCAAATATA+TGG | - | chr5_4:43251571-43251590 | None:intergenic | 20.0% |
| !! | ATATTTGCTTATTATGCATT+TGG | + | chr5_4:43251572-43251591 | Msa0852280:intron | 20.0% |
| !! | TTTGGATATTTATTTATGCT+TGG | + | chr5_4:43251590-43251609 | Msa0852280:intron | 20.0% |
| !! | ATTACATATTATGCAAAGAA+AGG | - | chr5_4:43251788-43251807 | None:intergenic | 20.0% |
| !! | CATATTTAAGTATTAACAGT+AGG | + | chr5_4:43251808-43251827 | Msa0852280:intron | 20.0% |
| !!! | TTTGTTAGAAGGATTATTTT+CGG | - | chr5_4:43252159-43252178 | None:intergenic | 20.0% |
| !!! | AATCAAATTTTAATAGCTTG+AGG | - | chr5_4:43253105-43253124 | None:intergenic | 20.0% |
| !! | ATACAAACTTCAAAGAAATT+GGG | - | chr5_4:43253831-43253850 | None:intergenic | 20.0% |
| !! | TATACAAACTTCAAAGAAAT+TGG | - | chr5_4:43253832-43253851 | None:intergenic | 20.0% |
| !!! | GCCTATTTTTATAAGAAATT+TGG | + | chr5_4:43253912-43253931 | Msa0852280:three_prime_UTR | 20.0% |
| ! | ATGAAGGAATTATGGAAATT+GGG | - | chr5_4:43245495-43245514 | None:intergenic | 25.0% |
| ! | AATGAAGGAATTATGGAAAT+TGG | - | chr5_4:43245496-43245515 | None:intergenic | 25.0% |
| !! | TCAACTAATTGCTAATTTTG+GGG | - | chr5_4:43245715-43245734 | None:intergenic | 25.0% |
| ! | ATTAGCAATTAGTTGAATAG+TGG | + | chr5_4:43245719-43245738 | Msa0852280:five_prime_UTR | 25.0% |
| ! | TAATCCAACAAAAACGAAAT+CGG | - | chr5_4:43245963-43245982 | None:intergenic | 25.0% |
| ! | AGAATATTCATAATCAGGTT+GGG | + | chr5_4:43246135-43246154 | Msa0852280:CDS | 25.0% |
| !! | TTTTCTTGATATTTGGGAAA+TGG | - | chr5_4:43246629-43246648 | None:intergenic | 25.0% |
| !!! | CAAAGTTGTTTTTGATAACT+TGG | + | chr5_4:43246651-43246670 | Msa0852280:intron | 25.0% |
| !! | TCATCATGTATAAGTTTGTT+CGG | + | chr5_4:43246805-43246824 | Msa0852280:intron | 25.0% |
| !! | AAGTTGCAATTTTCTTACTA+AGG | - | chr5_4:43247069-43247088 | None:intergenic | 25.0% |
| ! | TAAGGTAAAAATGAATCTTG+TGG | + | chr5_4:43247098-43247117 | Msa0852280:intron | 25.0% |
| !! | ATTATTTTCTCCACATTATC+TGG | + | chr5_4:43247338-43247357 | Msa0852280:intron | 25.0% |
| !! | TGATGATATTTTATATCCAC+TGG | + | chr5_4:43247662-43247681 | Msa0852280:CDS | 25.0% |
| ! | TTTGTTTGTTCTACTTTACA+TGG | + | chr5_4:43247806-43247825 | Msa0852280:intron | 25.0% |
| !!! | TGTACAATTTTTGCTTTGTT+TGG | + | chr5_4:43247851-43247870 | Msa0852280:intron | 25.0% |
| !! | AACTTGGAGAATACATTTTA+CGG | - | chr5_4:43248357-43248376 | None:intergenic | 25.0% |
| ! | CTCCAAGTTTAATTATCAAT+TGG | + | chr5_4:43248368-43248387 | Msa0852280:intron | 25.0% |
| !! | TCCCAATTGATAATTAAACT+TGG | - | chr5_4:43248373-43248392 | None:intergenic | 25.0% |
| ! | TTAACTTTATCCTCAAACAA+TGG | - | chr5_4:43248408-43248427 | None:intergenic | 25.0% |
| ! | ATATTATTTCACATTGGCAA+TGG | + | chr5_4:43248517-43248536 | Msa0852280:intron | 25.0% |
| !!! | TTTTTTTAAAGACGTTGTGA+AGG | - | chr5_4:43248580-43248599 | None:intergenic | 25.0% |
| ! | GAAAAAGATTTAGAAGTCAA+TGG | - | chr5_4:43248720-43248739 | None:intergenic | 25.0% |
| ! | ACAAACATTGAAGCAAATAA+GGG | - | chr5_4:43248789-43248808 | None:intergenic | 25.0% |
| ! | CGATTAGAATCAACTAAAAA+AGG | + | chr5_4:43249150-43249169 | Msa0852280:intron | 25.0% |
| ! | AATCAACTAAAAAAGGAAAC+TGG | + | chr5_4:43249157-43249176 | Msa0852280:intron | 25.0% |
| ! | ATCAACTAAAAAAGGAAACT+GGG | + | chr5_4:43249158-43249177 | Msa0852280:intron | 25.0% |
| ! | AAACAAAATGAGATCAAGAA+AGG | - | chr5_4:43249256-43249275 | None:intergenic | 25.0% |
| ! | ACAAAAATTAGAATGGCAAA+AGG | - | chr5_4:43249352-43249371 | None:intergenic | 25.0% |
| !! | TTTGCCATTCTAATTTTTGT+TGG | + | chr5_4:43249352-43249371 | Msa0852280:intron | 25.0% |
| ! | ATATATTACAAAAAGGGGAA+AGG | + | chr5_4:43249453-43249472 | Msa0852280:CDS | 25.0% |
| !! | GAAAATTGCATACTTTTGTA+TGG | - | chr5_4:43249512-43249531 | None:intergenic | 25.0% |
| !! | TTTTTCTTGAATAGGGAATA+TGG | + | chr5_4:43249654-43249673 | Msa0852280:CDS | 25.0% |
| ! | TAGGCACACATATTATAATT+CGG | - | chr5_4:43249813-43249832 | None:intergenic | 25.0% |
| ! | GATTGATGAAACATATAACT+TGG | - | chr5_4:43250245-43250264 | None:intergenic | 25.0% |
| ! | TTGTGTAACTATAAAAGTCA+TGG | - | chr5_4:43250377-43250396 | None:intergenic | 25.0% |
| ! | TATCTTCCTAAAAACCTATA+TGG | + | chr5_4:43250514-43250533 | Msa0852280:intron | 25.0% |
| ! | AATATAACAAGCAACCATAT+AGG | - | chr5_4:43250531-43250550 | None:intergenic | 25.0% |
| ! | ATTAGATAGGAAAATACCTA+CGG | + | chr5_4:43250604-43250623 | Msa0852280:intron | 25.0% |
| !!! | ATTTATTGGTTGATAGTGTT+TGG | + | chr5_4:43250656-43250675 | Msa0852280:intron | 25.0% |
| !!! | AATTTTATGGATTGAAACAC+AGG | + | chr5_4:43250894-43250913 | Msa0852280:intron | 25.0% |
| ! | GAAATAAAAAGTTCAAAACG+AGG | - | chr5_4:43251042-43251061 | None:intergenic | 25.0% |
| ! | ATTCTTGAGAATTGATAAGT+GGG | - | chr5_4:43251179-43251198 | None:intergenic | 25.0% |
| ! | TATGAAAGTGGAAGTTAAAA+TGG | - | chr5_4:43251251-43251270 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTGCTATGAAAG+TGG | - | chr5_4:43251263-43251282 | None:intergenic | 25.0% |
| !! | ATAAAATTGATCGGTTGTTT+TGG | + | chr5_4:43251435-43251454 | Msa0852280:intron | 25.0% |
| !!! | GAAATATTTTTTTTTTCCCC+AGG | - | chr5_4:43251758-43251777 | None:intergenic | 25.0% |
| ! | TGTAATATTCATAGCAAACA+TGG | + | chr5_4:43252099-43252118 | Msa0852280:intron | 25.0% |
| ! | AATGAATAATATTCACCAAC+GGG | - | chr5_4:43252230-43252249 | None:intergenic | 25.0% |
| ! | GAATGAATAATATTCACCAA+CGG | - | chr5_4:43252231-43252250 | None:intergenic | 25.0% |
| !!! | AGTTTTAATTAAATGGCTAC+GGG | - | chr5_4:43252363-43252382 | None:intergenic | 25.0% |
| !!! | CAGTTTTAATTAAATGGCTA+CGG | - | chr5_4:43252364-43252383 | None:intergenic | 25.0% |
| ! | CACATTAAGTTTGATCATTT+GGG | - | chr5_4:43252418-43252437 | None:intergenic | 25.0% |
| !!! | AACTAGGTTTTAATCAAAAC+TGG | + | chr5_4:43252916-43252935 | Msa0852280:intron | 25.0% |
| !!! | ACTAGGTTTTAATCAAAACT+GGG | + | chr5_4:43252917-43252936 | Msa0852280:intron | 25.0% |
| !! | CAAGTGGAATTTCTAAATTT+TGG | - | chr5_4:43253133-43253152 | None:intergenic | 25.0% |
| ! | AATATTTGACAACTTTCAAG+TGG | - | chr5_4:43253149-43253168 | None:intergenic | 25.0% |
| ! | AACTCATGATGTACAAATTA+AGG | + | chr5_4:43253692-43253711 | Msa0852280:three_prime_UTR | 25.0% |
| ! | ACTCATGATGTACAAATTAA+GGG | + | chr5_4:43253693-43253712 | Msa0852280:three_prime_UTR | 25.0% |
| ! | ATCATACTATCTATTATACG+AGG | - | chr5_4:43253765-43253784 | None:intergenic | 25.0% |
| !! | ATATATTAAGTTGTTCCACT+TGG | + | chr5_4:43253876-43253895 | Msa0852280:three_prime_UTR | 25.0% |
| ATGATGAAAAGTCAGAATCA+GGG | - | chr5_4:43245425-43245444 | None:intergenic | 30.0% | |
| ATTGGGGAAAATGGAAAATA+GGG | - | chr5_4:43245478-43245497 | None:intergenic | 30.0% | |
| AATTGGGGAAAATGGAAAAT+AGG | - | chr5_4:43245479-43245498 | None:intergenic | 30.0% | |
| ATTATGGAAATTGGGGAAAA+TGG | - | chr5_4:43245487-43245506 | None:intergenic | 30.0% | |
| TGAAGGAATTATGGAAATTG+GGG | - | chr5_4:43245494-43245513 | None:intergenic | 30.0% | |
| AGCGATTAATGAAGGAATTA+TGG | - | chr5_4:43245503-43245522 | None:intergenic | 30.0% | |
| ! | ATGGATTAAGCGATTAATGA+AGG | - | chr5_4:43245511-43245530 | None:intergenic | 30.0% |
| TTTATTCCCTAACCTGAAAA+GGG | - | chr5_4:43245653-43245672 | None:intergenic | 30.0% | |
| ! | TTTTATTCCCTAACCTGAAA+AGG | - | chr5_4:43245654-43245673 | None:intergenic | 30.0% |
| TAGTGGAAGATCAAAGAAAT+AGG | + | chr5_4:43245736-43245755 | Msa0852280:five_prime_UTR | 30.0% | |
| AGTGGAAGATCAAAGAAATA+GGG | + | chr5_4:43245737-43245756 | Msa0852280:five_prime_UTR | 30.0% | |
| TGTGTTAAAGATGGAAACTT+TGG | + | chr5_4:43245803-43245822 | Msa0852280:exon | 30.0% | |
| GTGTTAAAGATGGAAACTTT+GGG | + | chr5_4:43245804-43245823 | Msa0852280:exon | 30.0% | |
| AATACTGATGATAACAATGG+TGG | + | chr5_4:43245891-43245910 | Msa0852280:CDS | 30.0% | |
| !! | TCGTTTTTGTTGGATTATTC+TGG | + | chr5_4:43245966-43245985 | Msa0852280:CDS | 30.0% |
| GAAGTTGCAATAAGGATTAT+TGG | + | chr5_4:43246104-43246123 | Msa0852280:CDS | 30.0% | |
| CTGATTATGAATATTCTCTC+CGG | - | chr5_4:43246132-43246151 | None:intergenic | 30.0% | |
| GAGAATATTCATAATCAGGT+TGG | + | chr5_4:43246134-43246153 | Msa0852280:CDS | 30.0% | |
| ! | GAATATTCATAATCAGGTTG+GGG | + | chr5_4:43246136-43246155 | Msa0852280:CDS | 30.0% |
| GAATGGAACAGAAAATAACA+GGG | + | chr5_4:43246340-43246359 | Msa0852280:CDS | 30.0% | |
| AATGGAAGAACTACTAACAA+TGG | - | chr5_4:43246611-43246630 | None:intergenic | 30.0% | |
| !! | TAATTTGCTTGGTAGAATAG+TGG | + | chr5_4:43246715-43246734 | Msa0852280:intron | 30.0% |
| !!! | TTTCTCTAAGTCCCTTTTTT+CGG | - | chr5_4:43246923-43246942 | None:intergenic | 30.0% |
| !!! | AAGTTTTTTGAGGATCACAA+GGG | + | chr5_4:43246965-43246984 | Msa0852280:intron | 30.0% |
| CAGTAAATAAAACAAAGGTG+TGG | - | chr5_4:43246996-43247015 | None:intergenic | 30.0% | |
| ! | TGCAGAACAAATCTTTTTAC+TGG | + | chr5_4:43247020-43247039 | Msa0852280:intron | 30.0% |
| TTGCAACTTTGCTAATTGTA+AGG | + | chr5_4:43247080-43247099 | Msa0852280:intron | 30.0% | |
| AGCTTTCATATTGTTAACAG+AGG | - | chr5_4:43247169-43247188 | None:intergenic | 30.0% | |
| ACAATTGTAACTTACGAGAA+AGG | - | chr5_4:43247230-43247249 | None:intergenic | 30.0% | |
| TTCATGTGATATGCATTTAC+TGG | + | chr5_4:43247628-43247647 | Msa0852280:CDS | 30.0% | |
| !!! | GTTGTTTTTATAAGCTATCC+TGG | + | chr5_4:43247989-43248008 | Msa0852280:intron | 30.0% |
| TGATCTTAACTACATATGCA+AGG | - | chr5_4:43248098-43248117 | None:intergenic | 30.0% | |
| TCAAATAAGTCAATCCAAAC+AGG | + | chr5_4:43248115-43248134 | Msa0852280:intron | 30.0% | |
| !!! | ACAATATTGCAGCTGTTTTT+TGG | + | chr5_4:43248233-43248252 | Msa0852280:intron | 30.0% |
| TCATGAAACAACTACAAAGA+AGG | - | chr5_4:43248280-43248299 | None:intergenic | 30.0% | |
| GCTGACATATTATTTCACAT+TGG | + | chr5_4:43248511-43248530 | Msa0852280:intron | 30.0% | |
| ATACATGAGAACATATAGAC+AGG | + | chr5_4:43248743-43248762 | Msa0852280:intron | 30.0% | |
| GACAAACATTGAAGCAAATA+AGG | - | chr5_4:43248790-43248809 | None:intergenic | 30.0% | |
| ATTTGATGTATTGTGCATGA+CGG | + | chr5_4:43248869-43248888 | Msa0852280:intron | 30.0% | |
| ! | ACATAGGTTTTTGAACTAGA+TGG | + | chr5_4:43249022-43249041 | Msa0852280:intron | 30.0% |
| ! | AGTTGATTCTAATCGCTAAA+AGG | - | chr5_4:43249145-43249164 | None:intergenic | 30.0% |
| GACTATCAGATATATTGATG+CGG | + | chr5_4:43249397-43249416 | Msa0852280:intron | 30.0% | |
| !!! | TGACATTGTCTGACTTTTTT+AGG | + | chr5_4:43249557-43249576 | Msa0852280:intron | 30.0% |
| ATTCCCTATTCAAGAAAAAC+CGG | - | chr5_4:43249653-43249672 | None:intergenic | 30.0% | |
| TTATAATATGTGTGCCTATC+AGG | + | chr5_4:43249815-43249834 | Msa0852280:intron | 30.0% | |
| !! | CTTTCTTGATAATGCTTTCA+AGG | - | chr5_4:43249859-43249878 | None:intergenic | 30.0% |
| !! | CTTGAAAGCATTATCAAGAA+AGG | + | chr5_4:43249857-43249876 | Msa0852280:CDS | 30.0% |
| TCAAGAAAGGAAGTTCATTA+CGG | + | chr5_4:43249870-43249889 | Msa0852280:CDS | 30.0% | |
| !!! | TGTTCTGATTCAGTGTTTTT+TGG | + | chr5_4:43250137-43250156 | Msa0852280:intron | 30.0% |
| TACATGAGATGAATTGTAGT+TGG | + | chr5_4:43250209-43250228 | Msa0852280:intron | 30.0% | |
| TGATGAAACATATAACTTGG+AGG | - | chr5_4:43250242-43250261 | None:intergenic | 30.0% | |
| CATGCATATAACGTATAACT+TGG | - | chr5_4:43250315-43250334 | None:intergenic | 30.0% | |
| ACTATAAAAGTCATGGATGA+TGG | - | chr5_4:43250370-43250389 | None:intergenic | 30.0% | |
| TTATGGTGATACTATTCATC+AGG | + | chr5_4:43250398-43250417 | Msa0852280:intron | 30.0% | |
| TTTATTTGTGTACTTGCACA+CGG | + | chr5_4:43250458-43250477 | Msa0852280:intron | 30.0% | |
| ! | AAGCAACCATATAGGTTTTT+AGG | - | chr5_4:43250523-43250542 | None:intergenic | 30.0% |
| AAACAGTCAGAGGAATATAA+GGG | - | chr5_4:43250564-43250583 | None:intergenic | 30.0% | |
| !!! | ATATTTTCTGAAACAGTCAG+AGG | - | chr5_4:43250574-43250593 | None:intergenic | 30.0% |
| !!! | TAGCTTGTTTTGTTTTTCCT+GGG | + | chr5_4:43250627-43250646 | Msa0852280:intron | 30.0% |
| TTCCTGGGTATGAAATTTAT+TGG | + | chr5_4:43250642-43250661 | Msa0852280:intron | 30.0% | |
| AACCAATAAATTTCATACCC+AGG | - | chr5_4:43250647-43250666 | None:intergenic | 30.0% | |
| ATTCATCATGTGTTATGCAA+GGG | + | chr5_4:43250686-43250705 | Msa0852280:intron | 30.0% | |
| ! | ATGCACAGATACTTTGTTAT+TGG | + | chr5_4:43250830-43250849 | Msa0852280:intron | 30.0% |
| !! | TGCACAGATACTTTGTTATT+GGG | + | chr5_4:43250831-43250850 | Msa0852280:intron | 30.0% |
| AAGTTCAAAACGAGGAATAA+AGG | - | chr5_4:43251034-43251053 | None:intergenic | 30.0% | |
| ! | AGAGCGCTAAAAAATTGTTT+AGG | + | chr5_4:43251113-43251132 | Msa0852280:intron | 30.0% |
| GCTAAAAAATTGTTTAGGCT+TGG | + | chr5_4:43251118-43251137 | Msa0852280:intron | 30.0% | |
| CATTCTTGAGAATTGATAAG+TGG | - | chr5_4:43251180-43251199 | None:intergenic | 30.0% | |
| AAGTGGAAGTTAAAATGGAA+CGG | - | chr5_4:43251246-43251265 | None:intergenic | 30.0% | |
| TCAGTGCGATAAATAGTTTA+CGG | - | chr5_4:43251341-43251360 | None:intergenic | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | + | chr5_4:43251630-43251649 | Msa0852280:intron | 30.0% | |
| ! | TAATGAGTTGGATCGAAATA+TGG | + | chr5_4:43251642-43251661 | Msa0852280:intron | 30.0% |
| ! | AGTTGTGTATCATGTTTTCT+AGG | + | chr5_4:43251946-43251965 | Msa0852280:intron | 30.0% |
| ! | CAACCTAAACATTTTTACAC+TGG | - | chr5_4:43252032-43252051 | None:intergenic | 30.0% |
| CAGTGTAAAAATGTTTAGGT+TGG | + | chr5_4:43252030-43252049 | Msa0852280:intron | 30.0% | |
| CGCAAGAAACAAATATTTCT+AGG | - | chr5_4:43252073-43252092 | None:intergenic | 30.0% | |
| TTCAAATATAGTCATGCCTA+AGG | + | chr5_4:43252248-43252267 | Msa0852280:intron | 30.0% | |
| TCAAATATAGTCATGCCTAA+GGG | + | chr5_4:43252249-43252268 | Msa0852280:intron | 30.0% | |
| !!! | AATTTTTTTGGACATCCCTT+AGG | - | chr5_4:43252267-43252286 | None:intergenic | 30.0% |
| TAAGGGATGTCCAAAAAAAT+TGG | + | chr5_4:43252266-43252285 | Msa0852280:intron | 30.0% | |
| !!! | GTTTTTTAAAATGGTTCTGC+TGG | - | chr5_4:43252293-43252312 | None:intergenic | 30.0% |
| !! | CAGAACCATTTTAAAAAACC+TGG | + | chr5_4:43252294-43252313 | Msa0852280:intron | 30.0% |
| !!! | ATACGCCAGGTTTTTTAAAA+TGG | - | chr5_4:43252302-43252321 | None:intergenic | 30.0% |
| !!! | GTTTTTTAATTACATACGCC+AGG | - | chr5_4:43252315-43252334 | None:intergenic | 30.0% |
| CGTAGCCATTTAATTAAAAC+TGG | + | chr5_4:43252362-43252381 | Msa0852280:intron | 30.0% | |
| !!! | TGGGTATTGGTTTTAAAAGT+GGG | - | chr5_4:43252399-43252418 | None:intergenic | 30.0% |
| !!! | TTGGGTATTGGTTTTAAAAG+TGG | - | chr5_4:43252400-43252419 | None:intergenic | 30.0% |
| AAGTTTGATCATTTGGGTAT+TGG | - | chr5_4:43252412-43252431 | None:intergenic | 30.0% | |
| GCACATTAAGTTTGATCATT+TGG | - | chr5_4:43252419-43252438 | None:intergenic | 30.0% | |
| AAATCAGATGAACGAATCAA+AGG | - | chr5_4:43252527-43252546 | None:intergenic | 30.0% | |
| AGAGTTTCGTTAATAGAACT+GGG | + | chr5_4:43252810-43252829 | Msa0852280:intron | 30.0% | |
| GAAAGTAAAAAAGAAGTCGT+TGG | + | chr5_4:43252887-43252906 | Msa0852280:intron | 30.0% | |
| AAGTCGTTGGATTAATAACT+AGG | + | chr5_4:43252900-43252919 | Msa0852280:intron | 30.0% | |
| TCAAAACCTAAACCAAATAG+TGG | + | chr5_4:43253015-43253034 | Msa0852280:intron | 30.0% | |
| ATAGAAACCAATCCACTATT+TGG | - | chr5_4:43253030-43253049 | None:intergenic | 30.0% | |
| !! | AAATAGTGGATTGGTTTCTA+TGG | + | chr5_4:43253029-43253048 | Msa0852280:intron | 30.0% |
| !! | TTACATTGACTCATGCTTAA+TGG | + | chr5_4:43253057-43253076 | Msa0852280:intron | 30.0% |
| !! | GGAATTTCTAAATTTTGGTG+TGG | - | chr5_4:43253128-43253147 | None:intergenic | 30.0% |
| TGAAATAACTACTGATGAAG+AGG | + | chr5_4:43253168-43253187 | Msa0852280:intron | 30.0% | |
| ATACAAGTCATTACACAAAC+TGG | + | chr5_4:43253471-43253490 | Msa0852280:intron | 30.0% | |
| TTACACAAACTGGTATTAAG+AGG | + | chr5_4:43253481-43253500 | Msa0852280:intron | 30.0% | |
| !! | CTGAATAAAGAAGTGTTTGT+TGG | - | chr5_4:43253564-43253583 | None:intergenic | 30.0% |
| CAACAAACACTTCTTTATTC+AGG | + | chr5_4:43253562-43253581 | Msa0852280:intron | 30.0% | |
| !! | CATGAGTTGATTAAAACAAC+TGG | - | chr5_4:43253680-43253699 | None:intergenic | 30.0% |
| TTTGCTGAGATACTCAAAAT+CGG | + | chr5_4:43253717-43253736 | Msa0852280:three_prime_UTR | 30.0% | |
| TCTATTATACGAGGAATATG+AGG | - | chr5_4:43253756-43253775 | None:intergenic | 30.0% | |
| !! | GTTTGTATATGTTTTTGCAC+AGG | + | chr5_4:43253843-43253862 | Msa0852280:three_prime_UTR | 30.0% |
| GATGATGAAAAGTCAGAATC+AGG | - | chr5_4:43245426-43245445 | None:intergenic | 35.0% | |
| !! | AAGGGAGTGAATAGCTTTAT+AGG | - | chr5_4:43245548-43245567 | None:intergenic | 35.0% |
| ! | ATTTTCTTCATCCCCTTTTC+AGG | + | chr5_4:43245638-43245657 | Msa0852280:intron | 35.0% |
| TTATTCCCTAACCTGAAAAG+GGG | - | chr5_4:43245652-43245671 | None:intergenic | 35.0% | |
| AGAGTGAAGAATTGAGGATT+AGG | + | chr5_4:43245762-43245781 | Msa0852280:five_prime_UTR | 35.0% | |
| GAGTGAAGAATTGAGGATTA+GGG | + | chr5_4:43245763-43245782 | Msa0852280:five_prime_UTR | 35.0% | |
| TTAAAGATGGAAACTTTGGG+TGG | + | chr5_4:43245807-43245826 | Msa0852280:exon | 35.0% | |
| ! | ATAACAATGGTGGTGTAACT+TGG | + | chr5_4:43245901-43245920 | Msa0852280:CDS | 35.0% |
| AACGAAATCGGTGACAAAAA+GGG | - | chr5_4:43245951-43245970 | None:intergenic | 35.0% | |
| AAACGAAATCGGTGACAAAA+AGG | - | chr5_4:43245952-43245971 | None:intergenic | 35.0% | |
| CGGAGAGAATATTCATAATC+AGG | + | chr5_4:43246130-43246149 | Msa0852280:CDS | 35.0% | |
| GAAGTAGGTTATGATGATTG+TGG | + | chr5_4:43246158-43246177 | Msa0852280:CDS | 35.0% | |
| GGAATGGAACAGAAAATAAC+AGG | + | chr5_4:43246339-43246358 | Msa0852280:CDS | 35.0% | |
| TCAGAGATATGATATTCAGC+TGG | + | chr5_4:43246376-43246395 | Msa0852280:CDS | 35.0% | |
| TTCATTCGACAGCATTTACA+AGG | + | chr5_4:43246452-43246471 | Msa0852280:CDS | 35.0% | |
| TTTGTTTGTGATGTTGAGCT+TGG | + | chr5_4:43246514-43246533 | Msa0852280:intron | 35.0% | |
| !! | TTGTTCTGAGGTAATTTGCT+TGG | + | chr5_4:43246704-43246723 | Msa0852280:intron | 35.0% |
| !! | AGCATTTTTCGGTTGGATTT+GGG | - | chr5_4:43246871-43246890 | None:intergenic | 35.0% |
| !! | AAGCATTTTTCGGTTGGATT+TGG | - | chr5_4:43246872-43246891 | None:intergenic | 35.0% |
| ! | TAAGCCACACAAGCATTTTT+CGG | - | chr5_4:43246882-43246901 | None:intergenic | 35.0% |
| !!! | ATCACGTGAGAAGTTTTTTG+AGG | + | chr5_4:43246955-43246974 | Msa0852280:intron | 35.0% |
| !!! | GAAGTTTTTTGAGGATCACA+AGG | + | chr5_4:43246964-43246983 | Msa0852280:intron | 35.0% |
| CATGCTATAAGTGTGAACAA+TGG | - | chr5_4:43247295-43247314 | None:intergenic | 35.0% | |
| ! | GCATGAGTCTTGTCTTAAAT+TGG | + | chr5_4:43247310-43247329 | Msa0852280:intron | 35.0% |
| GAAATGACTACCAGATAATG+TGG | - | chr5_4:43247351-43247370 | None:intergenic | 35.0% | |
| CAGGTTTCTTTGTCACAATT+TGG | + | chr5_4:43247381-43247400 | Msa0852280:intron | 35.0% | |
| ACATATTTCACTCAGCGTTA+TGG | - | chr5_4:43247547-43247566 | None:intergenic | 35.0% | |
| !!! | GTTTTATTTTGCAGGGAGAT+AGG | + | chr5_4:43247565-43247584 | Msa0852280:intron | 35.0% |
| ATGTGATATGCATTTACTGG+TGG | + | chr5_4:43247631-43247650 | Msa0852280:CDS | 35.0% | |
| ATATTCACGATCTTGGTCAA+TGG | + | chr5_4:43247723-43247742 | Msa0852280:CDS | 35.0% | |
| AGACTGTTTGGAAAAGCTTA+TGG | - | chr5_4:43248068-43248087 | None:intergenic | 35.0% | |
| ! | CTTTTTACTAAGGACCTGTT+TGG | - | chr5_4:43248132-43248151 | None:intergenic | 35.0% |
| !!! | CAGGAGCTTACTTTTTACTA+AGG | - | chr5_4:43248142-43248161 | None:intergenic | 35.0% |
| ATGCATGACATACATATGCA+AGG | + | chr5_4:43248193-43248212 | Msa0852280:intron | 35.0% | |
| TGCATGACATACATATGCAA+GGG | + | chr5_4:43248194-43248213 | Msa0852280:intron | 35.0% | |
| ! | TTAATCGACTCCATTGTTTG+AGG | + | chr5_4:43248395-43248414 | Msa0852280:intron | 35.0% |
| !! | TCATTTGGTTGTCACTTTGT+CGG | - | chr5_4:43248962-43248981 | None:intergenic | 35.0% |
| AAGTGACAACCAAATGAGAA+AGG | + | chr5_4:43248965-43248984 | Msa0852280:intron | 35.0% | |
| GGCTGAACCTTAAAAAACAT+AGG | + | chr5_4:43249006-43249025 | Msa0852280:intron | 35.0% | |
| GCTCTAGTACCAATTTAAGA+AGG | + | chr5_4:43249044-43249063 | Msa0852280:intron | 35.0% | |
| ATCCCTTCAGATTGTAATTG+TGG | + | chr5_4:43249326-43249345 | Msa0852280:intron | 35.0% | |
| !!! | GTACCGGTTTTTCTTGAATA+GGG | + | chr5_4:43249647-43249666 | Msa0852280:CDS | 35.0% |
| GAAAGTTAAATACAACCCTG+TGG | - | chr5_4:43249700-43249719 | None:intergenic | 35.0% | |
| AACTTTCAAGCTAACATCTG+TGG | + | chr5_4:43249713-43249732 | Msa0852280:CDS | 35.0% | |
| !! | AATAAAGCATTGGACCTGAT+AGG | - | chr5_4:43249832-43249851 | None:intergenic | 35.0% |
| TCAAGGCAGAAATAAAGCAT+TGG | - | chr5_4:43249842-43249861 | None:intergenic | 35.0% | |
| CAAGAAAGGAAGTTCATTAC+GGG | + | chr5_4:43249871-43249890 | Msa0852280:CDS | 35.0% | |
| AAGAAAGGAAGTTCATTACG+GGG | + | chr5_4:43249872-43249891 | Msa0852280:CDS | 35.0% | |
| AATTATTACCTGTTCTGCTG+TGG | - | chr5_4:43249904-43249923 | None:intergenic | 35.0% | |
| AAATTCCACATGGCATTAGA+GGG | - | chr5_4:43250009-43250028 | None:intergenic | 35.0% | |
| AAAATTCCACATGGCATTAG+AGG | - | chr5_4:43250010-43250029 | None:intergenic | 35.0% | |
| ! | TCTAATGCCATGTGGAATTT+TGG | + | chr5_4:43250009-43250028 | Msa0852280:intron | 35.0% |
| AAAAAAAATTGGCCAGGGAA+TGG | - | chr5_4:43250051-43250070 | None:intergenic | 35.0% | |
| TGGGAAAAAAAAATTGGCCA+GGG | - | chr5_4:43250056-43250075 | None:intergenic | 35.0% | |
| CGGAACTGGGAAAAAAAAAT+TGG | - | chr5_4:43250062-43250081 | None:intergenic | 35.0% | |
| AACAGTCAGAGGAATATAAG+GGG | - | chr5_4:43250563-43250582 | None:intergenic | 35.0% | |
| GAAACAGTCAGAGGAATATA+AGG | - | chr5_4:43250565-43250584 | None:intergenic | 35.0% | |
| AAAACAAAACAAGCTACCGT+AGG | - | chr5_4:43250623-43250642 | None:intergenic | 35.0% | |
| !!! | GTAGCTTGTTTTGTTTTTCC+TGG | + | chr5_4:43250626-43250645 | Msa0852280:intron | 35.0% |
| !! | ATTGGTTGATAGTGTTTGGT+TGG | + | chr5_4:43250660-43250679 | Msa0852280:intron | 35.0% |
| !! | TTGGTTGATAGTGTTTGGTT+GGG | + | chr5_4:43250661-43250680 | Msa0852280:intron | 35.0% |
| GATTCATCATGTGTTATGCA+AGG | + | chr5_4:43250685-43250704 | Msa0852280:intron | 35.0% | |
| !! | GCACAGATACTTTGTTATTG+GGG | + | chr5_4:43250832-43250851 | Msa0852280:intron | 35.0% |
| CAAAACGAGGAATAAAGGTA+TGG | - | chr5_4:43251029-43251048 | None:intergenic | 35.0% | |
| TTTATCGCACTGAGAGATAT+AGG | + | chr5_4:43251348-43251367 | Msa0852280:intron | 35.0% | |
| ATTTATGCTTGGATATGTCC+TGG | + | chr5_4:43251601-43251620 | Msa0852280:intron | 35.0% | |
| TTTATGCTTGGATATGTCCT+GGG | + | chr5_4:43251602-43251621 | Msa0852280:intron | 35.0% | |
| !!! | ATCTCTAGATCTTTTTTCCC+AGG | - | chr5_4:43251622-43251641 | None:intergenic | 35.0% |
| ! | TTGGTTGTTATTGAATGTCC+TGG | + | chr5_4:43251737-43251756 | Msa0852280:intron | 35.0% |
| ! | TGGTTGTTATTGAATGTCCT+GGG | + | chr5_4:43251738-43251757 | Msa0852280:intron | 35.0% |
| TAACAGTAGGTGAGTTTAGT+AGG | + | chr5_4:43251821-43251840 | Msa0852280:intron | 35.0% | |
| AATGGACAAGAGAGAAAGAT+AGG | + | chr5_4:43251866-43251885 | Msa0852280:intron | 35.0% | |
| ATGGACAAGAGAGAAAGATA+GGG | + | chr5_4:43251867-43251886 | Msa0852280:intron | 35.0% | |
| AACTGTAAATAGACTCCACA+TGG | - | chr5_4:43251930-43251949 | None:intergenic | 35.0% | |
| AGGCCAGTGTAAAAATGTTT+AGG | + | chr5_4:43252026-43252045 | Msa0852280:intron | 35.0% | |
| !!! | TTCTGCTGGACCAATTTTTT+TGG | - | chr5_4:43252279-43252298 | None:intergenic | 35.0% |
| AATTCTCAATCCTTTCTCGT+TGG | + | chr5_4:43252490-43252509 | Msa0852280:intron | 35.0% | |
| GCACTTGCAGAAAAATCAAA+CGG | + | chr5_4:43252582-43252601 | Msa0852280:intron | 35.0% | |
| ATCACTGAATCAGGATATCT+CGG | - | chr5_4:43252725-43252744 | None:intergenic | 35.0% | |
| GGAAAAGATATCACTGAATC+AGG | - | chr5_4:43252734-43252753 | None:intergenic | 35.0% | |
| ! | TTCAGTGATATCTTTTCCAG+TGG | + | chr5_4:43252736-43252755 | Msa0852280:intron | 35.0% |
| CAGAGTTTCGTTAATAGAAC+TGG | + | chr5_4:43252809-43252828 | Msa0852280:intron | 35.0% | |
| GAGTTTCGTTAATAGAACTG+GGG | + | chr5_4:43252811-43252830 | Msa0852280:intron | 35.0% | |
| TAATAGAACTGGGGAAACAA+AGG | + | chr5_4:43252820-43252839 | Msa0852280:intron | 35.0% | |
| AATAGAACTGGGGAAACAAA+GGG | + | chr5_4:43252821-43252840 | Msa0852280:intron | 35.0% | |
| ACAGAATAACTCTGAACTGT+TGG | + | chr5_4:43252855-43252874 | Msa0852280:intron | 35.0% | |
| !! | ACCTAAACCAAATAGTGGAT+TGG | + | chr5_4:43253020-43253039 | Msa0852280:intron | 35.0% |
| ! | ACCAATCCACTATTTGGTTT+AGG | - | chr5_4:43253024-43253043 | None:intergenic | 35.0% |
| ! | TATTCAGGTTTGAGAGAGAA+AGG | + | chr5_4:43253577-43253596 | Msa0852280:intron | 35.0% |
| TTTAACCAATGCTCTGCATA+GGG | - | chr5_4:43253610-43253629 | None:intergenic | 35.0% | |
| TTGCTGAGATACTCAAAATC+GGG | + | chr5_4:43253718-43253737 | Msa0852280:three_prime_UTR | 35.0% | |
| ATAGGTTACCTGAGAGCTTA+TGG | - | chr5_4:43245530-43245549 | None:intergenic | 40.0% | |
| !!! | TTCATCCCCTTTTCAGGTTA+GGG | + | chr5_4:43245644-43245663 | Msa0852280:intron | 40.0% |
| AGGGTTAGAGTGAAGAATTG+AGG | + | chr5_4:43245756-43245775 | Msa0852280:five_prime_UTR | 40.0% | |
| ! | GACGATGCTGATGATAATGA+TGG | - | chr5_4:43245849-43245868 | None:intergenic | 40.0% |
| ! | GCATCGTCATCATCATCTTT+TGG | + | chr5_4:43245861-43245880 | Msa0852280:CDS | 40.0% |
| ! | TCGTCATCATCATCTTTTGG+AGG | + | chr5_4:43245864-43245883 | Msa0852280:CDS | 40.0% |
| ! | CGTCATCATCATCTTTTGGA+GGG | + | chr5_4:43245865-43245884 | Msa0852280:CDS | 40.0% |
| ! | AATGGTGGTGTAACTTGGTA+TGG | + | chr5_4:43245906-43245925 | Msa0852280:CDS | 40.0% |
| GTGTAACTTGGTATGGAATG+AGG | + | chr5_4:43245913-43245932 | Msa0852280:CDS | 40.0% | |
| ACGAAATCGGTGACAAAAAG+GGG | - | chr5_4:43245950-43245969 | None:intergenic | 40.0% | |
| !!! | GTCACCGATTTCGTTTTTGT+TGG | + | chr5_4:43245956-43245975 | Msa0852280:CDS | 40.0% |
| GTTGTTGACAATCATACCCT+CGG | - | chr5_4:43246015-43246034 | None:intergenic | 40.0% | |
| ! | GAGGGTATGATTGTCAACAA+CGG | + | chr5_4:43246014-43246033 | Msa0852280:CDS | 40.0% |
| ATTGTCAACAACGGAGTTTC+TGG | + | chr5_4:43246023-43246042 | Msa0852280:CDS | 40.0% | |
| GCAATAAGGATTATTGGAGC+CGG | + | chr5_4:43246110-43246129 | Msa0852280:CDS | 40.0% | |
| AGGTTATGATGATTGTGGTG+AGG | + | chr5_4:43246163-43246182 | Msa0852280:CDS | 40.0% | |
| GAAGAAGATGAAGACACAAG+AGG | - | chr5_4:43246275-43246294 | None:intergenic | 40.0% | |
| !! | TCCTTTCTCGCTTTTGTTGT+TGG | + | chr5_4:43246424-43246443 | Msa0852280:CDS | 40.0% |
| ACCAACAACAAAAGCGAGAA+AGG | - | chr5_4:43246428-43246447 | None:intergenic | 40.0% | |
| TTGCTTGGTAGAATAGTGGT+TGG | + | chr5_4:43246719-43246738 | Msa0852280:intron | 40.0% | |
| TTTCCATCATTCCCAAATGC+AGG | - | chr5_4:43246750-43246769 | None:intergenic | 40.0% | |
| !! | TGGCTGTTGTTTCCGAAAAA+AGG | + | chr5_4:43246908-43246927 | Msa0852280:intron | 40.0% |
| !! | GGCTGTTGTTTCCGAAAAAA+GGG | + | chr5_4:43246909-43246928 | Msa0852280:intron | 40.0% |
| !!! | TTTTTACTGGTTCTCCCCTT+TGG | + | chr5_4:43247033-43247052 | Msa0852280:intron | 40.0% |
| TTTACAGTCTCTTCCTCTGA+AGG | + | chr5_4:43247261-43247280 | Msa0852280:intron | 40.0% | |
| ! | TAAGAAGCAGACAGCTTTGA+AGG | + | chr5_4:43247439-43247458 | Msa0852280:CDS | 40.0% |
| AGGAAAGTCTCTTTACTTGC+TGG | + | chr5_4:43247585-43247604 | Msa0852280:CDS | 40.0% | |
| GTGAATATTGCATGCCAGAA+AGG | - | chr5_4:43247711-43247730 | None:intergenic | 40.0% | |
| GCATGCAATATTCACGATCT+TGG | + | chr5_4:43247716-43247735 | Msa0852280:CDS | 40.0% | |
| TTGATCTTACATTGCTGCAG+TGG | + | chr5_4:43247768-43247787 | Msa0852280:intron | 40.0% | |
| CCTGTAATAATTACAGACCC+CGG | + | chr5_4:43248158-43248177 | Msa0852280:intron | 40.0% | |
| CTGTAATAATTACAGACCCC+GGG | + | chr5_4:43248159-43248178 | Msa0852280:intron | 40.0% | |
| !!! | AGCTGTTTTTTGGTCACTGA+TGG | + | chr5_4:43248243-43248262 | Msa0852280:intron | 40.0% |
| ! | TTGGTCACTGATGGTGAAAT+TGG | + | chr5_4:43248252-43248271 | Msa0852280:intron | 40.0% |
| AAACTTGCCTATGTGTAGAC+AGG | + | chr5_4:43248328-43248347 | Msa0852280:intron | 40.0% | |
| CTGCAGTCGATATCACATAA+GGG | - | chr5_4:43248450-43248469 | None:intergenic | 40.0% | |
| ACTGCAGTCGATATCACATA+AGG | - | chr5_4:43248451-43248470 | None:intergenic | 40.0% | |
| TAACCAAGTTGCATCTCAGT+AGG | + | chr5_4:43248646-43248665 | Msa0852280:intron | 40.0% | |
| AAGGCTGATCCTTTCTCATT+TGG | - | chr5_4:43248977-43248996 | None:intergenic | 40.0% | |
| GGCCACAATTACAATCTGAA+GGG | - | chr5_4:43249331-43249350 | None:intergenic | 40.0% | |
| AGGCCACAATTACAATCTGA+AGG | - | chr5_4:43249332-43249351 | None:intergenic | 40.0% | |
| AAGTGTTAATCACCTGTCGA+CGG | - | chr5_4:43249488-43249507 | None:intergenic | 40.0% | |
| !!! | GGTACCGGTTTTTCTTGAAT+AGG | + | chr5_4:43249646-43249665 | Msa0852280:CDS | 40.0% |
| ! | AATGCCATGTGGAATTTTGG+AGG | + | chr5_4:43250012-43250031 | Msa0852280:intron | 40.0% |
| ACATCCTCCAAAATTCCACA+TGG | - | chr5_4:43250019-43250038 | None:intergenic | 40.0% | |
| CTGGGAAAAAAAAATTGGCC+AGG | - | chr5_4:43250057-43250076 | None:intergenic | 40.0% | |
| AAAATCCCATGCAACAGCAA+CGG | - | chr5_4:43250082-43250101 | None:intergenic | 40.0% | |
| ! | CGGTGGTGTATATTGTTTTC+TGG | + | chr5_4:43250478-43250497 | Msa0852280:intron | 40.0% |
| ACAGTCAGAGGAATATAAGG+GGG | - | chr5_4:43250562-43250581 | None:intergenic | 40.0% | |
| TCTCTTGGCATATAGCACAT+AGG | - | chr5_4:43250936-43250955 | None:intergenic | 40.0% | |
| TGTGGGAGAAGTTGAATTCA+TGG | + | chr5_4:43251521-43251540 | Msa0852280:intron | 40.0% | |
| GCAAATATATGGCTTTCCCA+TGG | - | chr5_4:43251560-43251579 | None:intergenic | 40.0% | |
| ! | GGTTGTTATTGAATGTCCTG+GGG | + | chr5_4:43251739-43251758 | Msa0852280:intron | 40.0% |
| ! | TCGTGAACCTGAAGTATTCT+TGG | + | chr5_4:43251986-43252005 | Msa0852280:intron | 40.0% |
| ! | CGTGAACCTGAAGTATTCTT+GGG | + | chr5_4:43251987-43252006 | Msa0852280:intron | 40.0% |
| !! | TGGGTGTTGGACAATGTTTA+AGG | + | chr5_4:43252006-43252025 | Msa0852280:intron | 40.0% |
| ! | AACACCACTGCACTTTTACT+AGG | + | chr5_4:43252177-43252196 | Msa0852280:intron | 40.0% |
| CTAAGGAAAAATGATCCCGT+TGG | + | chr5_4:43252212-43252231 | Msa0852280:intron | 40.0% | |
| CAGATGAACGAATCAAAGGA+TGG | - | chr5_4:43252523-43252542 | None:intergenic | 40.0% | |
| TGGAGAGAAACGACAAGAAA+GGG | - | chr5_4:43252554-43252573 | None:intergenic | 40.0% | |
| TTGGAGAGAAACGACAAGAA+AGG | - | chr5_4:43252555-43252574 | None:intergenic | 40.0% | |
| ! | TTTCTTGTCGTTTCTCTCCA+AGG | + | chr5_4:43252554-43252573 | Msa0852280:intron | 40.0% |
| ! | TTCTTGTCGTTTCTCTCCAA+GGG | + | chr5_4:43252555-43252574 | Msa0852280:intron | 40.0% |
| AATAATGTCACAGTCGAGTG+AGG | + | chr5_4:43252621-43252640 | Msa0852280:intron | 40.0% | |
| ! | AGTGATATCTTTTCCAGTGG+AGG | + | chr5_4:43252739-43252758 | Msa0852280:intron | 40.0% |
| ! | GTGATATCTTTTCCAGTGGA+GGG | + | chr5_4:43252740-43252759 | Msa0852280:intron | 40.0% |
| AGTCAGTGAGTGTAGTAGAA+AGG | + | chr5_4:43252786-43252805 | Msa0852280:intron | 40.0% | |
| AATCAAAACTGGGTCTGAAC+TGG | + | chr5_4:43252927-43252946 | Msa0852280:intron | 40.0% | |
| ATCAAAACTGGGTCTGAACT+GGG | + | chr5_4:43252928-43252947 | Msa0852280:intron | 40.0% | |
| ! | GAGGTATATTTGAGACGTGT+TGG | + | chr5_4:43253187-43253206 | Msa0852280:intron | 40.0% |
| TTAACCAATGCTCTGCATAG+GGG | - | chr5_4:43253609-43253628 | None:intergenic | 40.0% | |
| CTTTAACCAATGCTCTGCAT+AGG | - | chr5_4:43253611-43253630 | None:intergenic | 40.0% | |
| TGCTGAGATACTCAAAATCG+GGG | + | chr5_4:43253719-43253738 | Msa0852280:three_prime_UTR | 40.0% | |
| TACGAGGAATATGAGGTTAG+CGG | - | chr5_4:43253749-43253768 | None:intergenic | 40.0% | |
| ACACGCTCAACACTCTCAAA+AGG | + | chr5_4:43245381-43245400 | Msa0852280:five_prime_UTR | 45.0% | |
| GAATCAGGGAGCTGAAAACT+TGG | - | chr5_4:43245411-43245430 | None:intergenic | 45.0% | |
| CGCTTAATCCATAAGCTCTC+AGG | + | chr5_4:43245519-43245538 | Msa0852280:five_prime_UTR | 45.0% | |
| !!! | CTTCATCCCCTTTTCAGGTT+AGG | + | chr5_4:43245643-43245662 | Msa0852280:intron | 45.0% |
| GGTGACAAAAAGGGGTTAAC+AGG | - | chr5_4:43245942-43245961 | None:intergenic | 45.0% | |
| CGTTCGAGTAATGATTCCGA+GGG | + | chr5_4:43245996-43246015 | Msa0852280:CDS | 45.0% | |
| !! | CAACAACGGAGTTTCTGGTT+CGG | + | chr5_4:43246028-43246047 | Msa0852280:CDS | 45.0% |
| !! | TTACGATCTCAGGTTGATGC+TGG | + | chr5_4:43246053-43246072 | Msa0852280:CDS | 45.0% |
| !! | CATAATCAGGTTGGGGAAGT+AGG | + | chr5_4:43246143-43246162 | Msa0852280:CDS | 45.0% |
| GATTGTGGTGAGGAGCTTAT+TGG | + | chr5_4:43246173-43246192 | Msa0852280:CDS | 45.0% | |
| GAGCTTATTGGTGAGAGAAG+TGG | + | chr5_4:43246185-43246204 | Msa0852280:CDS | 45.0% | |
| AGAAGTGGAATGCCTGGATT+GGG | + | chr5_4:43246200-43246219 | Msa0852280:CDS | 45.0% | |
| GTGGAATTGAGGCTAGTGAA+GGG | + | chr5_4:43246246-43246265 | Msa0852280:CDS | 45.0% | |
| TGGAATTGAGGCTAGTGAAG+GGG | + | chr5_4:43246247-43246266 | Msa0852280:CDS | 45.0% | |
| ATATTCAGCTGGTTGCCAAG+TGG | + | chr5_4:43246387-43246406 | Msa0852280:CDS | 45.0% | |
| AAGAATCTGCTCGATCCACT+TGG | - | chr5_4:43246405-43246424 | None:intergenic | 45.0% | |
| !! | CCACACAAGCATTTTTCGGT+TGG | - | chr5_4:43246878-43246897 | None:intergenic | 45.0% |
| CCAACCGAAAAATGCTTGTG+TGG | + | chr5_4:43246875-43246894 | Msa0852280:intron | 45.0% | |
| GCTTGTGTGGCTTACAATAC+TGG | + | chr5_4:43246888-43246907 | Msa0852280:intron | 45.0% | |
| TAAGGTAGAACACCGCCAAA+GGG | - | chr5_4:43247051-43247070 | None:intergenic | 45.0% | |
| !! | AATGGATTGTGCACCTTCAG+AGG | - | chr5_4:43247277-43247296 | None:intergenic | 45.0% |
| AGTCATTTCTGCGAACTTGC+AGG | + | chr5_4:43247362-43247381 | Msa0852280:intron | 45.0% | |
| AGCGTTATGGTATGAGGATG+AGG | - | chr5_4:43247534-43247553 | None:intergenic | 45.0% | |
| TCACTCAGCGTTATGGTATG+AGG | - | chr5_4:43247540-43247559 | None:intergenic | 45.0% | |
| ! | TGTTGGGTTAGGAGGTAACA+TGG | - | chr5_4:43247688-43247707 | None:intergenic | 45.0% |
| !! | TTGCATGCCAGAAAGGTGTT+GGG | - | chr5_4:43247704-43247723 | None:intergenic | 45.0% |
| ! | ATTGCATGCCAGAAAGGTGT+TGG | - | chr5_4:43247705-43247724 | None:intergenic | 45.0% |
| CACGATCTTGGTCAATGGTA+TGG | + | chr5_4:43247728-43247747 | Msa0852280:intron | 45.0% | |
| AAGCTATCCTGGAGAGCTTA+TGG | + | chr5_4:43248000-43248019 | Msa0852280:intron | 45.0% | |
| CCTAATTCCATAAGCTCTCC+AGG | - | chr5_4:43248010-43248029 | None:intergenic | 45.0% | |
| CCTGGAGAGCTTATGGAATT+AGG | + | chr5_4:43248007-43248026 | Msa0852280:intron | 45.0% | |
| CAAGGACTTGTGAGACTGTT+TGG | - | chr5_4:43248080-43248099 | None:intergenic | 45.0% | |
| CCGGGGTCTGTAATTATTAC+AGG | - | chr5_4:43248161-43248180 | None:intergenic | 45.0% | |
| CAAGTTGCATCTCAGTAGGT+GGG | + | chr5_4:43248650-43248669 | Msa0852280:intron | 45.0% | |
| AAGTTGCATCTCAGTAGGTG+GGG | + | chr5_4:43248651-43248670 | Msa0852280:intron | 45.0% | |
| GGTTGGATACATGGAACAGA+CGG | + | chr5_4:43248672-43248691 | Msa0852280:intron | 45.0% | |
| GTTGGATACATGGAACAGAC+GGG | + | chr5_4:43248673-43248692 | Msa0852280:intron | 45.0% | |
| ATGGAACAGACGGGATCATA+TGG | + | chr5_4:43248682-43248701 | Msa0852280:intron | 45.0% | |
| ATGACGGCATCAACACTTAG+AGG | + | chr5_4:43248885-43248904 | Msa0852280:intron | 45.0% | |
| GCATCAACACTTAGAGGAGA+CGG | + | chr5_4:43248891-43248910 | Msa0852280:intron | 45.0% | |
| ! | GTCACTTTGTCGGATATCAC+AGG | - | chr5_4:43248952-43248971 | None:intergenic | 45.0% |
| ATGAGAAAGGATCAGCCTTC+TGG | + | chr5_4:43248978-43248997 | Msa0852280:intron | 45.0% | |
| ATTGATGCGGCAAGTTGCAA+TGG | + | chr5_4:43249410-43249429 | Msa0852280:CDS | 45.0% | |
| AGGTCATAATTTCCGTCGAC+AGG | + | chr5_4:43249473-43249492 | Msa0852280:CDS | 45.0% | |
| AAGAAAAACCGGTACCAGAC+TGG | - | chr5_4:43249642-43249661 | None:intergenic | 45.0% | |
| ! | TCTTTTCGTCACTGACCACA+GGG | + | chr5_4:43249682-43249701 | Msa0852280:CDS | 45.0% |
| GCTAACATCTGTGGTTGAGA+AGG | + | chr5_4:43249722-43249741 | Msa0852280:CDS | 45.0% | |
| AAAGTCCCTCTAATGCCATG+TGG | + | chr5_4:43250001-43250020 | Msa0852280:intron | 45.0% | |
| AAAATTGGCCAGGGAATGGA+GGG | - | chr5_4:43250047-43250066 | None:intergenic | 45.0% | |
| AAAAATTGGCCAGGGAATGG+AGG | - | chr5_4:43250048-43250067 | None:intergenic | 45.0% | |
| ATTTGTGTACTTGCACACGG+TGG | + | chr5_4:43250461-43250480 | Msa0852280:intron | 45.0% | |
| GCATATAGCACATAGGTCAC+CGG | - | chr5_4:43250929-43250948 | None:intergenic | 45.0% | |
| TAGGGGAATGCATCTTCTCT+TGG | - | chr5_4:43250951-43250970 | None:intergenic | 45.0% | |
| TTTGCAGCGCAACAAGATAG+GGG | - | chr5_4:43250968-43250987 | None:intergenic | 45.0% | |
| GTTTGCAGCGCAACAAGATA+GGG | - | chr5_4:43250969-43250988 | None:intergenic | 45.0% | |
| TGTTTGCAGCGCAACAAGAT+AGG | - | chr5_4:43250970-43250989 | None:intergenic | 45.0% | |
| ! | GCGAAGATTGTGTTTCTGAG+TGG | + | chr5_4:43250998-43251017 | Msa0852280:CDS | 45.0% |
| ATCGCACTGAGAGATATAGG+TGG | + | chr5_4:43251351-43251370 | Msa0852280:intron | 45.0% | |
| TTTCCCATGGTGAAGAACTG+AGG | - | chr5_4:43251547-43251566 | None:intergenic | 45.0% | |
| AGAGAAAGATAGGGTTCCCT+AGG | + | chr5_4:43251876-43251895 | Msa0852280:intron | 45.0% | |
| TGGCAATTGTCAACGACCAA+GGG | - | chr5_4:43251910-43251929 | None:intergenic | 45.0% | |
| ATGGCAATTGTCAACGACCA+AGG | - | chr5_4:43251911-43251930 | None:intergenic | 45.0% | |
| CCAACACCCAAGAATACTTC+AGG | - | chr5_4:43251996-43252015 | None:intergenic | 45.0% | |
| ! | CCTGAAGTATTCTTGGGTGT+TGG | + | chr5_4:43251993-43252012 | Msa0852280:intron | 45.0% |
| ! | GTGCAGTGGTGTTTGTTAGA+AGG | - | chr5_4:43252170-43252189 | None:intergenic | 45.0% |
| ! | CATGCCTAGTAAAAGTGCAG+TGG | - | chr5_4:43252184-43252203 | None:intergenic | 45.0% |
| CTAGGCATGAAGATGCTCTA+AGG | + | chr5_4:43252195-43252214 | Msa0852280:intron | 45.0% | |
| ! | CGGCTGAGAGCACATAAATT+TGG | - | chr5_4:43252445-43252464 | None:intergenic | 45.0% |
| AACGTTAGCGTGACATGAAG+CGG | - | chr5_4:43252465-43252484 | None:intergenic | 45.0% | |
| GAACGAATCAAAGGATGGAC+TGG | - | chr5_4:43252518-43252537 | None:intergenic | 45.0% | |
| GGAGAGAAACGACAAGAAAG+GGG | - | chr5_4:43252553-43252572 | None:intergenic | 45.0% | |
| GAGGCAAAATCAGTAGTGAC+AGG | - | chr5_4:43252703-43252722 | None:intergenic | 45.0% | |
| ACTGAATCAGGATATCTCGG+AGG | - | chr5_4:43252722-43252741 | None:intergenic | 45.0% | |
| TGACTGCTGGAATCATGCAT+CGG | - | chr5_4:43252771-43252790 | None:intergenic | 45.0% | |
| GAAACAGTACTTCTGAGCTC+TGG | - | chr5_4:43253083-43253102 | None:intergenic | 45.0% | |
| TAACCAATGCTCTGCATAGG+GGG | - | chr5_4:43253608-43253627 | None:intergenic | 45.0% | |
| ! | ACTTGTTGATCCATCTCCGA+AGG | - | chr5_4:43253649-43253668 | None:intergenic | 45.0% |
| GCTGAGATACTCAAAATCGG+GGG | + | chr5_4:43253720-43253739 | Msa0852280:three_prime_UTR | 45.0% | |
| ACGAGGAATATGAGGTTAGC+GGG | - | chr5_4:43253748-43253767 | None:intergenic | 45.0% | |
| !!! | AAAAAAAAACAATTTTTTTA+GGG | - | chr5_4:43245677-43245696 | None:intergenic | 5.0% |
| !!! | TAAAAAAAAACAATTTTTTT+AGG | - | chr5_4:43245678-43245697 | None:intergenic | 5.0% |
| !!! | ATATATAATTCTAAATTTTA+TGG | + | chr5_4:43250881-43250900 | Msa0852280:intron | 5.0% |
| !!! | TTTTTTTTTTTTAAATTGTT+AGG | - | chr5_4:43253256-43253275 | None:intergenic | 5.0% |
| GCGTTCGAGTAATGATTCCG+AGG | + | chr5_4:43245995-43246014 | Msa0852280:CDS | 50.0% | |
| ! | TGGTTCGGAGTTACGATCTC+AGG | + | chr5_4:43246043-43246062 | Msa0852280:CDS | 50.0% |
| GTGCAGGGGAAGTTGCAATA+AGG | + | chr5_4:43246096-43246115 | Msa0852280:CDS | 50.0% | |
| GAGAAGTGGAATGCCTGGAT+TGG | + | chr5_4:43246199-43246218 | Msa0852280:CDS | 50.0% | |
| GCATCATTCTCACCCAATCC+AGG | - | chr5_4:43246215-43246234 | None:intergenic | 50.0% | |
| ATTGGGTGAGAATGATGCCG+AGG | + | chr5_4:43246217-43246236 | Msa0852280:CDS | 50.0% | |
| TTGGGTGAGAATGATGCCGA+GGG | + | chr5_4:43246218-43246237 | Msa0852280:CDS | 50.0% | |
| GGTGGAATTGAGGCTAGTGA+AGG | + | chr5_4:43246245-43246264 | Msa0852280:CDS | 50.0% | |
| TTCATCTTCTTCGTCGTCGC+TGG | + | chr5_4:43246283-43246302 | Msa0852280:CDS | 50.0% | |
| !! | TAGTGGACAGGTTGATGGTG+AGG | + | chr5_4:43246310-43246329 | Msa0852280:CDS | 50.0% |
| !! | GCACTGACTTGCTTGTTCTG+AGG | + | chr5_4:43246692-43246711 | Msa0852280:intron | 50.0% |
| TGGTTGGATGTGCCTGCATT+TGG | + | chr5_4:43246735-43246754 | Msa0852280:intron | 50.0% | |
| GGTTGGATGTGCCTGCATTT+GGG | + | chr5_4:43246736-43246755 | Msa0852280:intron | 50.0% | |
| GTGCCTGCATTTGGGAATGA+TGG | + | chr5_4:43246744-43246763 | Msa0852280:intron | 50.0% | |
| !! | TTACTGGTTCTCCCCTTTGG+CGG | + | chr5_4:43247036-43247055 | Msa0852280:intron | 50.0% |
| AAGGTAGAACACCGCCAAAG+GGG | - | chr5_4:43247050-43247069 | None:intergenic | 50.0% | |
| CTAAGGTAGAACACCGCCAA+AGG | - | chr5_4:43247052-43247071 | None:intergenic | 50.0% | |
| TTAGGAGGTAACATGGCCAG+TGG | - | chr5_4:43247681-43247700 | None:intergenic | 50.0% | |
| !! | CAGAAAGGTGTTGGGTTAGG+AGG | - | chr5_4:43247696-43247715 | None:intergenic | 50.0% |
| CTCCTAACCCAACACCTTTC+TGG | + | chr5_4:43247694-43247713 | Msa0852280:CDS | 50.0% | |
| !! | TGCCAGAAAGGTGTTGGGTT+AGG | - | chr5_4:43247699-43247718 | None:intergenic | 50.0% |
| ATGCATTCAGCATCTCACCC+GGG | - | chr5_4:43248179-43248198 | None:intergenic | 50.0% | |
| CATGCATTCAGCATCTCACC+CGG | - | chr5_4:43248180-43248199 | None:intergenic | 50.0% | |
| ACGGCATCCTGTCTACACAT+AGG | - | chr5_4:43248338-43248357 | None:intergenic | 50.0% | |
| CCACCTACTGAGATGCAACT+TGG | - | chr5_4:43248652-43248671 | None:intergenic | 50.0% | |
| CCAAGTTGCATCTCAGTAGG+TGG | + | chr5_4:43248649-43248668 | Msa0852280:intron | 50.0% | |
| AGTAGGTGGGGTTGGATACA+TGG | + | chr5_4:43248663-43248682 | Msa0852280:intron | 50.0% | |
| CCATCTAGTACAGTGTCCTC+TGG | - | chr5_4:43248921-43248940 | None:intergenic | 50.0% | |
| CCAGAGGACACTGTACTAGA+TGG | + | chr5_4:43248918-43248937 | Msa0852280:intron | 50.0% | |
| GAGGACACTGTACTAGATGG+TGG | + | chr5_4:43248921-43248940 | Msa0852280:intron | 50.0% | |
| AGGATCAGCCTTCTGGATGT+TGG | + | chr5_4:43248985-43249004 | Msa0852280:intron | 50.0% | |
| AGGTTCAGCCAACATCCAGA+AGG | - | chr5_4:43248996-43249015 | None:intergenic | 50.0% | |
| ! | CTCTTTTCGTCACTGACCAC+AGG | + | chr5_4:43249681-43249700 | Msa0852280:CDS | 50.0% |
| CATGCAACAGCAACGGAACT+GGG | - | chr5_4:43250075-43250094 | None:intergenic | 50.0% | |
| ! | CAGTTCCGTTGCTGTTGCAT+GGG | + | chr5_4:43250074-43250093 | Msa0852280:intron | 50.0% |
| ! | CATGTGTTATGCAAGGGTGC+TGG | + | chr5_4:43250692-43250711 | Msa0852280:intron | 50.0% |
| GAAACACAGGTTACTGCTGC+CGG | + | chr5_4:43250907-43250926 | Msa0852280:intron | 50.0% | |
| ATGGCCTCAGTTCTTCACCA+TGG | + | chr5_4:43251540-43251559 | Msa0852280:intron | 50.0% | |
| TGGCCTCAGTTCTTCACCAT+GGG | + | chr5_4:43251541-43251560 | Msa0852280:intron | 50.0% | |
| ! | AAGCCTTGTCCCACTAAGTG+GGG | - | chr5_4:43251719-43251738 | None:intergenic | 50.0% |
| ! | CAAGCCTTGTCCCACTAAGT+GGG | - | chr5_4:43251720-43251739 | None:intergenic | 50.0% |
| GATAGGGTTCCCTAGGTCTT+TGG | + | chr5_4:43251883-43251902 | Msa0852280:intron | 50.0% | |
| ACCAAGGGTCCAAAGACCTA+GGG | - | chr5_4:43251895-43251914 | None:intergenic | 50.0% | |
| GGTCGTTGACAATTGCCATG+TGG | + | chr5_4:43251912-43251931 | Msa0852280:intron | 50.0% | |
| AGGTTCTCGACATCTCGTTG+AGG | + | chr5_4:43252641-43252660 | Msa0852280:intron | 50.0% | |
| TCGACATCTCGTTGAGGCTT+AGG | + | chr5_4:43252647-43252666 | Msa0852280:intron | 50.0% | |
| GACTGCTGGAATCATGCATC+GGG | - | chr5_4:43252770-43252789 | None:intergenic | 50.0% | |
| ! | CTACTACACTCACTGACTGC+TGG | - | chr5_4:43252784-43252803 | None:intergenic | 50.0% |
| GAAACAGTTCCGAACTGGCT+TGG | - | chr5_4:43252955-43252974 | None:intergenic | 50.0% | |
| CTTGCGAAACAGTTCCGAAC+TGG | - | chr5_4:43252960-43252979 | None:intergenic | 50.0% | |
| GCAATTTCAGCACGTCCAAG+TGG | - | chr5_4:43253894-43253913 | None:intergenic | 50.0% | |
| !! | CGATCTCAGGTTGATGCTGG+TGG | + | chr5_4:43246056-43246075 | Msa0852280:CDS | 55.0% |
| !! | ATGCTGGTGGTGCTGTTGCT+GGG | + | chr5_4:43246069-43246088 | Msa0852280:CDS | 55.0% |
| CTGTTGCTGGGAGTAGTGCA+GGG | + | chr5_4:43246081-43246100 | Msa0852280:CDS | 55.0% | |
| TGTTGCTGGGAGTAGTGCAG+GGG | + | chr5_4:43246082-43246101 | Msa0852280:CDS | 55.0% | |
| GGTGAGAGAAGTGGAATGCC+TGG | + | chr5_4:43246194-43246213 | Msa0852280:CDS | 55.0% | |
| CTCAATTCCACCACGACCCT+CGG | - | chr5_4:43246237-43246256 | None:intergenic | 55.0% | |
| !! | GCTGGTAGTGGACAGGTTGA+TGG | + | chr5_4:43246305-43246324 | Msa0852280:CDS | 55.0% |
| !! | AGGTTGATGGTGAGGCTGCT+GGG | + | chr5_4:43246318-43246337 | Msa0852280:CDS | 55.0% |
| TGCATTCAGCATCTCACCCG+GGG | - | chr5_4:43248178-43248197 | None:intergenic | 55.0% | |
| TGCATCTCAGTAGGTGGGGT+TGG | + | chr5_4:43248655-43248674 | Msa0852280:intron | 55.0% | |
| !! | CCAGACTGGTGTTGGCAACA+AGG | - | chr5_4:43249628-43249647 | None:intergenic | 55.0% |
| CCTTGTTGCCAACACCAGTC+TGG | + | chr5_4:43249625-43249644 | Msa0852280:CDS | 55.0% | |
| TGCCAACACCAGTCTGGTAC+CGG | + | chr5_4:43249631-43249650 | Msa0852280:CDS | 55.0% | |
| AACCGGTACCAGACTGGTGT+TGG | - | chr5_4:43249636-43249655 | None:intergenic | 55.0% | |
| GGTCTATGCCACAGCAGAAC+AGG | + | chr5_4:43249893-43249912 | Msa0852280:CDS | 55.0% | |
| TGTCTAGACCCTCCATTCCC+TGG | + | chr5_4:43250036-43250055 | Msa0852280:intron | 55.0% | |
| CCATGCAACAGCAACGGAAC+TGG | - | chr5_4:43250076-43250095 | None:intergenic | 55.0% | |
| ! | CCAGTTCCGTTGCTGTTGCA+TGG | + | chr5_4:43250073-43250092 | Msa0852280:intron | 55.0% |
| ACTAAGTGGGGACTTGGGGT+CGG | - | chr5_4:43251707-43251726 | None:intergenic | 55.0% | |
| ACCCCAAGTCCCCACTTAGT+GGG | + | chr5_4:43251707-43251726 | Msa0852280:intron | 55.0% | |
| TCCCACTAAGTGGGGACTTG+GGG | - | chr5_4:43251711-43251730 | None:intergenic | 55.0% | |
| GTCCCACTAAGTGGGGACTT+GGG | - | chr5_4:43251712-43251731 | None:intergenic | 55.0% | |
| TGTCCCACTAAGTGGGGACT+TGG | - | chr5_4:43251713-43251732 | None:intergenic | 55.0% | |
| AGTCCCCACTTAGTGGGACA+AGG | + | chr5_4:43251713-43251732 | Msa0852280:intron | 55.0% | |
| ! | CCAAGCCTTGTCCCACTAAG+TGG | - | chr5_4:43251721-43251740 | None:intergenic | 55.0% |
| CCACTTAGTGGGACAAGGCT+TGG | + | chr5_4:43251718-43251737 | Msa0852280:intron | 55.0% | |
| TCCCTAGGTCTTTGGACCCT+TGG | + | chr5_4:43251891-43251910 | Msa0852280:intron | 55.0% | |
| GACCAAGGGTCCAAAGACCT+AGG | - | chr5_4:43251896-43251915 | None:intergenic | 55.0% | |
| !! | TGGACTGGCACCAACGAGAA+AGG | - | chr5_4:43252503-43252522 | None:intergenic | 55.0% |
| TTCTGCAAGTGCAGAGCCCT+TGG | - | chr5_4:43252574-43252593 | None:intergenic | 55.0% | |
| TGCTCAGAGCTGCTTCTCGT+TGG | - | chr5_4:43252675-43252694 | None:intergenic | 55.0% | |
| GAACTGGGACCAAGCCAGTT+CGG | + | chr5_4:43252943-43252962 | Msa0852280:intron | 55.0% | |
| TTGCCCCCTATGCAGAGCAT+TGG | + | chr5_4:43253602-43253621 | Msa0852280:CDS | 55.0% | |
| GCAGCTGATCTTCGCACCTT+CGG | + | chr5_4:43253630-43253649 | Msa0852280:CDS | 55.0% | |
| GATCTTCGCACCTTCGGAGA+TGG | + | chr5_4:43253636-43253655 | Msa0852280:CDS | 55.0% | |
| !! | GATGCTGGTGGTGCTGTTGC+TGG | + | chr5_4:43246068-43246087 | Msa0852280:CDS | 60.0% |
| GCTGTTGCTGGGAGTAGTGC+AGG | + | chr5_4:43246080-43246099 | Msa0852280:CDS | 60.0% | |
| GAGAATGATGCCGAGGGTCG+TGG | + | chr5_4:43246224-43246243 | Msa0852280:CDS | 60.0% | |
| AATGATGCCGAGGGTCGTGG+TGG | + | chr5_4:43246227-43246246 | Msa0852280:CDS | 60.0% | |
| ! | CGAGGGTCGTGGTGGAATTG+AGG | + | chr5_4:43246235-43246254 | Msa0852280:CDS | 60.0% |
| TCTTCTTCGTCGTCGCTGGC+TGG | + | chr5_4:43246287-43246306 | Msa0852280:CDS | 60.0% | |
| !! | CAGGTTGATGGTGAGGCTGC+TGG | + | chr5_4:43246317-43246336 | Msa0852280:CDS | 60.0% |
| GATGGTGAGGCTGCTGGGAA+TGG | + | chr5_4:43246323-43246342 | Msa0852280:CDS | 60.0% | |
| TAGAGGAGACGGCTGACCAG+AGG | + | chr5_4:43248902-43248921 | Msa0852280:intron | 60.0% | |
| GACCCCAAGTCCCCACTTAG+TGG | + | chr5_4:43251706-43251725 | Msa0852280:intron | 60.0% | |
| GCATCGGGATATCCCTCCAC+TGG | - | chr5_4:43252755-43252774 | None:intergenic | 60.0% | |
| ! | TCGTCGTCGCTGGCTGGTAG+TGG | + | chr5_4:43246293-43246312 | Msa0852280:CDS | 65.0% |
| !! | GTCGCTGGCTGGTAGTGGAC+AGG | + | chr5_4:43246298-43246317 | Msa0852280:CDS | 65.0% |
| GGGACTTGGGGTCGGCTACA+TGG | - | chr5_4:43251699-43251718 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 43245350 | 43253969 | 43245350 | ID=Msa0852280;Name=Msa0852280 |
| chr5_4 | mRNA | 43245350 | 43253969 | 43245350 | ID=Msa0852280-mRNA-1;Parent=Msa0852280;Name=Msa0852280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=390|1|1|1|0.75|0.66|9|280|481 |
| chr5_4 | exon | 43245350 | 43245593 | 43245350 | ID=Msa0852280-mRNA-1:exon:13657;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43245667 | 43246473 | 43245667 | ID=Msa0852280-mRNA-1:exon:13658;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43247384 | 43247460 | 43247384 | ID=Msa0852280-mRNA-1:exon:13659;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43247579 | 43247744 | 43247579 | ID=Msa0852280-mRNA-1:exon:13660;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43249406 | 43249494 | 43249406 | ID=Msa0852280-mRNA-1:exon:13661;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43249579 | 43249743 | 43249579 | ID=Msa0852280-mRNA-1:exon:13662;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43249837 | 43249914 | 43249837 | ID=Msa0852280-mRNA-1:exon:13663;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43250916 | 43251019 | 43250916 | ID=Msa0852280-mRNA-1:exon:13664;Parent=Msa0852280-mRNA-1 |
| chr5_4 | exon | 43253584 | 43253969 | 43253584 | ID=Msa0852280-mRNA-1:exon:13665;Parent=Msa0852280-mRNA-1 |
| chr5_4 | five_prime_UTR | 43245350 | 43245593 | 43245350 | ID=Msa0852280-mRNA-1:five_prime_utr;Parent=Msa0852280-mRNA-1 |
| chr5_4 | five_prime_UTR | 43245667 | 43245812 | 43245667 | ID=Msa0852280-mRNA-1:five_prime_utr;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43245813 | 43246473 | 43245813 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43247384 | 43247460 | 43247384 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43247579 | 43247744 | 43247579 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43249406 | 43249494 | 43249406 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43249579 | 43249743 | 43249579 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43249837 | 43249914 | 43249837 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43250916 | 43251019 | 43250916 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | CDS | 43253584 | 43253689 | 43253584 | ID=Msa0852280-mRNA-1:cds;Parent=Msa0852280-mRNA-1 |
| chr5_4 | three_prime_UTR | 43253690 | 43253969 | 43253690 | ID=Msa0852280-mRNA-1:three_prime_utr;Parent=Msa0852280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
