AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0774740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0774740 MtrunA17_Chr5g0428941 95.695 511 19 1 1 508 1 511 0.0 971
Msa0774740 MtrunA17_Chr1g0212691 53.250 400 185 1 100 499 71 468 1.39e-154 451
Msa0774740 MtrunA17_Chr8g0391881 47.339 357 157 1 100 456 49 374 6.09e-112 337
Msa0774740 MtrunA17_Chr4g0034981 27.762 353 247 4 133 479 235 585 6.43e-35 138
Msa0774740 MtrunA17_Chr4g0043941 23.548 310 199 4 173 480 46 319 2.77e-31 124
Msa0774740 MtrunA17_Chr4g0043941 23.182 220 160 3 138 348 43 262 5.97e-17 82.0
Msa0774740 MtrunA17_Chr2g0294671 28.425 292 199 7 203 491 210 494 1.18e-29 122
Msa0774740 MtrunA17_Chr2g0294671 21.986 282 171 7 136 372 211 488 3.14e-13 72.0
Msa0774740 MtrunA17_Chr5g0445491 25.982 331 196 9 168 489 191 481 3.03e-25 108
Msa0774740 MtrunA17_Chr5g0445491 24.153 236 166 5 131 358 221 451 1.76e-12 69.7
Msa0774740 MtrunA17_Chr6g0448821 24.620 329 242 6 153 479 32 356 1.14e-23 102
Msa0774740 MtrunA17_Chr8g0391861 51.852 81 35 2 419 499 1 77 3.15e-19 84.0
Msa0774740 MtrunA17_Chr2g0304101 25.379 264 156 7 220 481 82 306 2.86e-17 82.8
Msa0774740 MtrunA17_Chr5g0417641 25.455 275 161 7 208 480 61 293 9.16e-15 75.1
Msa0774740 MtrunA17_Chr2g0311181 23.022 278 167 6 208 484 73 304 3.13e-14 73.9
Msa0774740 MtrunA17_Chr7g0250261 23.774 265 182 7 224 479 26 279 7.70e-12 66.2
Msa0774740 MtrunA17_Chr0c29g0494001 23.774 265 182 7 224 479 26 279 7.70e-12 66.2
Msa0774740 MtrunA17_Chr3g0127891 22.604 407 266 14 116 479 91 491 1.55e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0774740 AT4G02990.2 67.176 524 148 5 1 507 3 519 0.0 676
Msa0774740 AT4G02990.1 67.176 524 148 5 1 507 3 519 0.0 676
Msa0774740 AT2G44020.1 49.876 403 200 1 100 502 76 476 4.64e-145 427
Msa0774740 AT2G21710.1 26.854 391 276 7 132 517 241 626 2.16e-39 152
Msa0774740 AT2G21710.1 24.460 278 194 6 99 361 274 550 2.06e-17 85.9
Msa0774740 AT4G38160.4 24.638 276 205 3 216 488 54 329 2.94e-32 127
Msa0774740 AT4G38160.4 20.705 227 167 5 134 348 39 264 2.76e-14 74.7
Msa0774740 AT4G38160.1 24.638 276 205 3 216 488 54 329 2.94e-32 127
Msa0774740 AT4G38160.1 20.705 227 167 5 134 348 39 264 2.76e-14 74.7
Msa0774740 AT4G38160.2 24.638 276 205 3 216 488 54 329 4.32e-32 127
Msa0774740 AT4G38160.2 20.705 227 167 5 134 348 39 264 2.39e-14 75.1
Msa0774740 AT4G38160.3 24.638 276 205 3 216 488 54 329 8.76e-32 126
Msa0774740 AT4G38160.3 20.705 227 167 5 134 348 39 264 4.45e-14 74.3
Msa0774740 AT4G14605.2 29.434 265 177 7 219 480 211 468 3.81e-27 115
Msa0774740 AT4G14605.1 29.434 265 177 7 219 480 211 468 3.81e-27 115
Msa0774740 AT2G21710.2 23.975 317 235 3 132 443 241 556 4.62e-26 112
Msa0774740 AT2G21710.2 24.460 278 194 6 99 361 274 550 1.85e-17 85.9
Msa0774740 AT2G21710.3 24.127 315 233 3 132 441 241 554 9.11e-26 111
Msa0774740 AT2G21710.3 24.460 278 194 6 99 361 274 550 2.01e-17 85.9
Msa0774740 AT1G78930.1 23.404 329 247 5 153 479 249 574 8.21e-25 108
Msa0774740 AT5G55580.2 23.529 306 223 7 161 461 38 337 4.76e-20 92.8
Msa0774740 AT5G55580.2 23.932 234 167 5 129 355 106 335 1.73e-12 69.7
Msa0774740 AT5G55580.1 23.529 306 223 7 161 461 144 443 1.20e-19 92.4
Msa0774740 AT5G55580.1 23.932 234 167 5 129 355 212 441 2.78e-12 69.3
Msa0774740 AT1G61970.2 25.843 356 245 9 145 491 61 406 4.39e-17 84.0
Msa0774740 AT1G61970.7 25.843 356 245 9 145 491 61 406 4.39e-17 84.0
Msa0774740 AT1G61970.6 25.843 356 245 9 145 491 61 406 4.39e-17 84.0
Msa0774740 AT1G61970.3 25.843 356 245 9 145 491 61 406 4.39e-17 84.0
Msa0774740 AT1G61970.5 25.843 356 245 9 145 491 61 406 4.39e-17 84.0
Msa0774740 AT1G61970.4 25.843 356 245 9 145 491 61 406 4.39e-17 84.0
Msa0774740 AT1G61970.1 25.843 356 245 9 145 491 61 406 4.39e-17 84.0
Msa0774740 AT2G34620.1 26.006 323 193 7 163 481 12 292 5.63e-17 82.4
Msa0774740 AT5G55580.3 23.364 214 156 5 169 378 185 394 5.29e-14 74.3
Msa0774740 AT1G62120.1 22.378 286 186 6 207 459 91 373 6.89e-13 71.2
Msa0774740 AT1G61980.3 22.930 314 201 9 207 482 87 397 2.38e-12 69.3
Msa0774740 AT1G61980.2 22.930 314 201 9 207 482 87 397 2.38e-12 69.3
Msa0774740 AT1G61980.1 22.930 314 201 9 207 482 87 397 2.38e-12 69.3
Msa0774740 AT3G18870.1 27.517 149 104 2 332 479 123 268 4.34e-12 67.0
Msa0774740 AT2G03050.1 24.510 204 149 5 283 483 71 272 2.57e-11 65.1
Msa0774740 AT2G03050.2 24.510 204 149 5 283 483 72 273 2.70e-11 65.1
Msa0774740 AT5G54180.1 24.051 395 232 11 112 484 145 493 3.25e-11 66.2

Find 132 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTAGATTCCCGGAGATTT+TGG 0.122651 5_2:-51254750 Msa0774740:CDS
GCTTGATTACCTTGGTAAAT+TGG 0.181028 5_2:-51255020 Msa0774740:CDS
GAGACACAACCTTATATTCT+TGG 0.218625 5_2:-51254641 Msa0774740:CDS
AATTGCCATGTAATTGTATT+AGG 0.259846 5_2:-51255423 Msa0774740:CDS
TTCCCAGCATTCTTCACTTA+TGG 0.279890 5_2:-51254215 Msa0774740:CDS
GGAAAGGCCTTTGGTAGATT+TGG 0.285905 5_2:-51254243 Msa0774740:CDS
TTATATTCTTGGATTCGATT+TGG 0.301999 5_2:-51254630 Msa0774740:CDS
ACATCTGTTGCTTATTTGAT+TGG 0.305827 5_2:-51254809 Msa0774740:CDS
GCTCAATTCTGTGCTTGATT+TGG 0.309060 5_2:-51254471 Msa0774740:CDS
AGCATTCTTCACTTATGGTT+TGG 0.313050 5_2:-51254210 Msa0774740:CDS
AGTTTGAATCCCAACACTTC+AGG 0.346326 5_2:+51254848 None:intergenic
GCCGGTGGTCAAGTATCTTC+AGG 0.347359 5_2:-51254918 Msa0774740:CDS
TTCATAACATCAACCGTAAC+AGG 0.355753 5_2:+51255145 None:intergenic
GAAATGCCAATTCTAACATT+TGG 0.356044 5_2:-51255481 Msa0774740:CDS
GAATGACCAAATGTTAGAAT+TGG 0.365180 5_2:+51255475 None:intergenic
GGACTATGACACTATTGATA+TGG 0.372055 5_2:-51254084 Msa0774740:CDS
GATTTGGATGTTGAGGATTT+CGG 0.372881 5_2:-51254455 Msa0774740:CDS
AAGATTCAATGTTCTGTTGC+TGG 0.373247 5_2:-51255382 Msa0774740:CDS
ACCTTGGTAAATTGGGAGTT+AGG 0.378790 5_2:-51255012 Msa0774740:CDS
CTTGATTACCTTGGTAAATT+GGG 0.382917 5_2:-51255019 Msa0774740:CDS
AAATCGAATCCAAGAATATA+AGG 0.400009 5_2:+51254632 None:intergenic
ACCCGCATCCCCAAAATCTC+CGG 0.400611 5_2:+51254740 None:intergenic
TAACAACTATCCTCTTGTAC+TGG 0.404481 5_2:-51255074 Msa0774740:CDS
GTTAGAATTGGCATTTCTGT+TGG 0.407937 5_2:+51255487 None:intergenic
TTAGAATTGGCATTTCTGTT+GGG 0.415285 5_2:+51255488 None:intergenic
TGGCGAAATTCAAAGGAAAC+GGG 0.417191 5_2:-51255302 Msa0774740:CDS
AGGCATCTTAACTAGATTCC+CGG 0.419846 5_2:-51254759 Msa0774740:CDS
TGATATGGAAGAGATGGAAA+TGG 0.426007 5_2:-51254069 Msa0774740:CDS
TATGAGTTCTTGCGAGGAAT+CGG 0.426180 5_2:-51255202 Msa0774740:CDS
ATGTAGTGTCAAGAAGAATA+TGG 0.433633 5_2:-51255050 Msa0774740:CDS
GACCGGTGCTGCTGATTCGC+GGG 0.440005 5_2:-51255341 Msa0774740:CDS
TATCTGCAAGCTTCGGCTCT+AGG 0.443828 5_2:+51254504 None:intergenic
GTAATTGTATTAGGAAGATA+AGG 0.444282 5_2:-51255414 Msa0774740:CDS
GTGGAGTATCTGGAAAGCTT+GGG 0.446638 5_2:-51254695 Msa0774740:CDS
GTTGCTTATTTGATTGGAAT+CGG 0.449333 5_2:-51254803 Msa0774740:CDS
GCTCAGTATCCTGACATCAT+TGG 0.449340 5_2:-51254533 Msa0774740:CDS
TCAAGACCATCAAGTTCATC+AGG 0.450633 5_2:+51255172 None:intergenic
TGTGGAGTATCTGGAAAGCT+TGG 0.452920 5_2:-51254696 Msa0774740:CDS
CTGGTAGGACGTATAGTTAT+AGG 0.454647 5_2:-51255363 Msa0774740:CDS
ATTGTTCCTGATGAACTTGA+TGG 0.456166 5_2:-51255178 Msa0774740:CDS
AATTTCGCCAGAGTCCCGTT+TGG 0.461902 5_2:+51255315 None:intergenic
CTGGCGAAATTCAAAGGAAA+CGG 0.464517 5_2:-51255303 Msa0774740:CDS
CCGGTGGTCAAGTATCTTCA+GGG 0.466032 5_2:-51254917 Msa0774740:CDS
CGGGGATCCAAACGGGACTC+TGG 0.468895 5_2:-51255322 Msa0774740:CDS
TGATTCGCGGGGATCCAAAC+GGG 0.468998 5_2:-51255329 Msa0774740:CDS
GAGAGGTATCCTGAAGTGTT+GGG 0.470423 5_2:-51254857 Msa0774740:CDS
CACTATTGATATGGAAGAGA+TGG 0.470517 5_2:-51254075 Msa0774740:CDS
GCCGAACATTAAACTCTTCG+AGG 0.470544 5_2:+51254579 None:intergenic
CTTTCCAGATACTCCACAAA+AGG 0.473709 5_2:+51254701 None:intergenic
CTTCTCTTATCTGCAAGCTT+CGG 0.475890 5_2:+51254497 None:intergenic
CATAACATGGTTGCTAAGAA+AGG 0.477153 5_2:-51254167 Msa0774740:CDS
GCTTCATTCTAGTGTGGTTG+TGG 0.477857 5_2:-51254948 Msa0774740:CDS
AAACCATAAGTGAAGAATGC+TGG 0.479920 5_2:+51254212 None:intergenic
GAAAGGATTGAAGTGTTCTC+TGG 0.480186 5_2:-51254150 Msa0774740:CDS
GGACCGGTGCTGCTGATTCG+CGG 0.485919 5_2:-51255342 Msa0774740:CDS
CCCTCGAAGAGTTTAATGTT+CGG 0.492782 5_2:-51254580 Msa0774740:CDS
CTGATTCGCGGGGATCCAAA+CGG 0.493660 5_2:-51255330 Msa0774740:CDS
CAAATGAGGAAGATGATTGT+TGG 0.494500 5_2:-51254335 Msa0774740:CDS
GTGTTGGGATTCAAACTTGA+GGG 0.498220 5_2:-51254842 Msa0774740:CDS
AAGTGAGATGGAAAGGCCTT+TGG 0.499414 5_2:-51254252 Msa0774740:CDS
ATCTGAAATTAAGAAAGATA+AGG 0.501088 5_2:-51255245 Msa0774740:CDS
AATGAATTCATGTCAAATGA+TGG 0.505787 5_2:+51254044 None:intergenic
GTTCCTGTGCTTGATTACCT+TGG 0.506625 5_2:-51255028 Msa0774740:CDS
TCAGGGGATGGATATCAAAC+CGG 0.510690 5_2:-51254900 Msa0774740:CDS
AAGGCCTTTCCATCTCACTT+TGG 0.510909 5_2:+51254255 None:intergenic
TGAGAGGTATCCTGAAGTGT+TGG 0.512556 5_2:-51254858 Msa0774740:CDS
CCACGTTAACGCAGTTCTTG+CGG 0.514225 5_2:-51254985 Msa0774740:CDS
TGTTACGGTTGATGTTATGA+AGG 0.514841 5_2:-51255143 Msa0774740:CDS
TGGTCTTGAACTTCCTGTTA+CGG 0.514972 5_2:-51255158 Msa0774740:CDS
GAATCTGATTCATCGCTCCT+TGG 0.517997 5_2:+51254014 None:intergenic
TTAGCAACCATGTTATGCCT+AGG 0.519862 5_2:+51254173 None:intergenic
AGTCTAGCAATAGCTAGCCT+TGG 0.521140 5_2:+51254668 None:intergenic
TGTTTAAAGCAAGTAGTTGA+GGG 0.521469 5_2:+51254309 None:intergenic
TGTGCTTGATTTGGATGTTG+AGG 0.522040 5_2:-51254462 Msa0774740:CDS
AGGTCGGTTCCAATGATGTC+AGG 0.523721 5_2:+51254524 None:intergenic
AACCATAAGTGAAGAATGCT+GGG 0.531139 5_2:+51254213 None:intergenic
AATTTCAGATAAACTCGGAC+GGG 0.532219 5_2:+51255258 None:intergenic
CCCGCATCCCCAAAATCTCC+GGG 0.534445 5_2:+51254741 None:intergenic
ATCTTCCTAATACAATTACA+TGG 0.538869 5_2:+51255418 None:intergenic
TCCCCGCGAATCAGCAGCAC+CGG 0.539690 5_2:+51255339 None:intergenic
TAGAATTGGCATTTCTGTTG+GGG 0.546214 5_2:+51255489 None:intergenic
TGCAAGCTTCGGCTCTAGGT+CGG 0.547317 5_2:+51254508 None:intergenic
AATTCAAAGGAAACGGGGAG+GGG 0.548403 5_2:-51255296 Msa0774740:CDS
CGATTACTTCCAAAGTGAGA+TGG 0.549323 5_2:-51254264 Msa0774740:CDS
GGGACTCTGGCGAAATTCAA+AGG 0.550251 5_2:-51255309 Msa0774740:CDS
TTCTTAATTTCAGATAAACT+CGG 0.551846 5_2:+51255253 None:intergenic
AAATTCAAAGGAAACGGGGA+GGG 0.552308 5_2:-51255297 Msa0774740:CDS
TATTTGATTGGAATCGGTGT+TGG 0.555605 5_2:-51254797 Msa0774740:CDS
ATGTTTAAAGCAAGTAGTTG+AGG 0.555715 5_2:+51254308 None:intergenic
CCCTGAAGATACTTGACCAC+CGG 0.559238 5_2:+51254917 None:intergenic
AACAACTATCCTCTTGTACT+GGG 0.560648 5_2:-51255073 Msa0774740:CDS
CCGCAAGAACTGCGTTAACG+TGG 0.564848 5_2:+51254985 None:intergenic
AGGATACTGAGCAATTATAG+AGG 0.570014 5_2:+51254544 None:intergenic
ACACTAGAATGAAGCACTTG+TGG 0.573884 5_2:+51254956 None:intergenic
AAATCAACGTGCTTCAGCAT+AGG 0.578326 5_2:+51254386 None:intergenic
ACACTACATCCCAGTACAAG+AGG 0.579075 5_2:+51255064 None:intergenic
GGTCAAGTATCTTCAGGGGA+TGG 0.581823 5_2:-51254912 Msa0774740:CDS
TGTGGTTGTGGATCTTGTGC+CGG 0.581899 5_2:-51254936 Msa0774740:CDS
ACTTCCAAAGTGAGATGGAA+AGG 0.582725 5_2:-51254259 Msa0774740:CDS
TGAATTCATTGATGCGGCCA+AGG 0.585206 5_2:-51254031 Msa0774740:CDS
TTGACATGAATTCATTGATG+CGG 0.585388 5_2:-51254037 Msa0774740:CDS
ATATTCCTCGTGTTCTTGAG+AGG 0.588108 5_2:-51254874 Msa0774740:CDS
TGAGAAATTTGAGCAACGAA+TGG 0.590339 5_2:-51254105 Msa0774740:CDS
AGAACACGAGGAATATCATC+CGG 0.593566 5_2:+51254881 None:intergenic
GATTGAAGTGTTCTCTGGCA+TGG 0.595640 5_2:-51254145 Msa0774740:CDS
ATAAGCAACAGATGTACTCA+TGG 0.595928 5_2:+51254817 None:intergenic
TCCTAACTCCCAATTTACCA+AGG 0.597942 5_2:+51255011 None:intergenic
CCGAACATTAAACTCTTCGA+GGG 0.604717 5_2:+51254580 None:intergenic
AGGACGTATAGTTATAGGAC+CGG 0.612646 5_2:-51255358 Msa0774740:CDS
TTACCAAGGTAATCAAGCAC+AGG 0.615617 5_2:+51255025 None:intergenic
TTCAATGTTCTGTTGCTGGT+AGG 0.617163 5_2:-51255378 Msa0774740:CDS
TGGAAAGCTTGGGTATTCCA+AGG 0.618103 5_2:-51254685 Msa0774740:CDS
AACTCAACCAAATCTACCAA+AGG 0.619874 5_2:+51254236 None:intergenic
TAATTTCAGATAAACTCGGA+CGG 0.623058 5_2:+51255257 None:intergenic
ACAAGTGCTTCATTCTAGTG+TGG 0.623981 5_2:-51254954 Msa0774740:CDS
ATTGTTTATGAGTTCTTGCG+AGG 0.628501 5_2:-51255208 Msa0774740:CDS
TGGAGTCAACTATAAAACCT+AGG 0.628708 5_2:-51254190 Msa0774740:CDS
AGAATTGGCATTTCTGTTGG+GGG 0.636458 5_2:+51255490 None:intergenic
ACCGGTGCTGCTGATTCGCG+GGG 0.640590 5_2:-51255340 Msa0774740:CDS
TATAAAACCTAGGCATAACA+TGG 0.645601 5_2:-51254180 Msa0774740:CDS
AATCATTGAGAAGATGCCGC+AGG 0.648015 5_2:-51254429 Msa0774740:CDS
GGTGTTGGAAGAAGAGAACT+CGG 0.656801 5_2:-51254782 Msa0774740:CDS
CGGTGGTCAAGTATCTTCAG+GGG 0.659657 5_2:-51254916 Msa0774740:CDS
AGTGTTGGGATTCAAACTTG+AGG 0.668806 5_2:-51254843 Msa0774740:CDS
GGTTGTGGATCTTGTGCCGG+TGG 0.671700 5_2:-51254933 Msa0774740:CDS
GAAATTCAAAGGAAACGGGG+AGG 0.688989 5_2:-51255298 Msa0774740:CDS
TCAGCATAGGTGTAGTACTG+AGG 0.702066 5_2:+51254399 None:intergenic
ATAAACAATTTCACGCAACG+TGG 0.704806 5_2:+51255222 None:intergenic
GGCGAAATTCAAAGGAAACG+GGG 0.719631 5_2:-51255301 Msa0774740:CDS
GTACTGAGGCTAACTACCTG+CGG 0.724109 5_2:+51254413 None:intergenic
GGATACCTCTCAAGAACACG+AGG 0.733931 5_2:+51254869 None:intergenic
GTTGGAAGAAGAGAACTCGG+AGG 0.795387 5_2:-51254779 Msa0774740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTAATTTCAGATAAACT+CGG + chr5_2:51254247-51254266 None:intergenic 20.0%
!!! ATCTGAAATTAAGAAAGATA+AGG - chr5_2:51254252-51254271 Msa0774740:CDS 20.0%
!! TTCTTAATTTCAGATAAACT+CGG + chr5_2:51254247-51254266 None:intergenic 20.0%
!!! ATCTGAAATTAAGAAAGATA+AGG - chr5_2:51254252-51254271 Msa0774740:CDS 20.0%
! AATTGCCATGTAATTGTATT+AGG - chr5_2:51254074-51254093 Msa0774740:CDS 25.0%
! ATCTTCCTAATACAATTACA+TGG + chr5_2:51254082-51254101 None:intergenic 25.0%
! GTAATTGTATTAGGAAGATA+AGG - chr5_2:51254083-51254102 Msa0774740:CDS 25.0%
! AAATCGAATCCAAGAATATA+AGG + chr5_2:51254868-51254887 None:intergenic 25.0%
! TTATATTCTTGGATTCGATT+TGG - chr5_2:51254867-51254886 Msa0774740:CDS 25.0%
!! TTGATTTTCTTAAGGATTGT+GGG - chr5_2:51255127-51255146 Msa0774740:CDS 25.0%
! AATGAATTCATGTCAAATGA+TGG + chr5_2:51255456-51255475 None:intergenic 25.0%
! AATTGCCATGTAATTGTATT+AGG - chr5_2:51254074-51254093 Msa0774740:CDS 25.0%
! ATCTTCCTAATACAATTACA+TGG + chr5_2:51254082-51254101 None:intergenic 25.0%
! GTAATTGTATTAGGAAGATA+AGG - chr5_2:51254083-51254102 Msa0774740:CDS 25.0%
! AAATCGAATCCAAGAATATA+AGG + chr5_2:51254868-51254887 None:intergenic 25.0%
! TTATATTCTTGGATTCGATT+TGG - chr5_2:51254867-51254886 Msa0774740:CDS 25.0%
!! TTGATTTTCTTAAGGATTGT+GGG - chr5_2:51255127-51255146 Msa0774740:CDS 25.0%
! AATGAATTCATGTCAAATGA+TGG + chr5_2:51255456-51255475 None:intergenic 25.0%
TTAGAATTGGCATTTCTGTT+GGG + chr5_2:51254012-51254031 None:intergenic 30.0%
GAAATGCCAATTCTAACATT+TGG - chr5_2:51254016-51254035 Msa0774740:CDS 30.0%
GAATGACCAAATGTTAGAAT+TGG + chr5_2:51254025-51254044 None:intergenic 30.0%
TAATTTCAGATAAACTCGGA+CGG + chr5_2:51254243-51254262 None:intergenic 30.0%
!!! TGTTGATTTTCTTCACAGTT+TGG - chr5_2:51254381-51254400 Msa0774740:CDS 30.0%
!! GTTGATTTTCTTCACAGTTT+GGG - chr5_2:51254382-51254401 Msa0774740:CDS 30.0%
! TTGATTTTCTTCACAGTTTG+GGG - chr5_2:51254383-51254402 Msa0774740:CDS 30.0%
ATGTAGTGTCAAGAAGAATA+TGG - chr5_2:51254447-51254466 Msa0774740:CDS 30.0%
CTTGATTACCTTGGTAAATT+GGG - chr5_2:51254478-51254497 Msa0774740:CDS 30.0%
! ACATCTGTTGCTTATTTGAT+TGG - chr5_2:51254688-51254707 Msa0774740:CDS 30.0%
GTTGCTTATTTGATTGGAAT+CGG - chr5_2:51254694-51254713 Msa0774740:CDS 30.0%
!! GTTGATTTTCTTAAGGATTG+TGG - chr5_2:51255126-51255145 Msa0774740:CDS 30.0%
! TGTTTAAAGCAAGTAGTTGA+GGG + chr5_2:51255191-51255210 None:intergenic 30.0%
! ATGTTTAAAGCAAGTAGTTG+AGG + chr5_2:51255192-51255211 None:intergenic 30.0%
TATAAAACCTAGGCATAACA+TGG - chr5_2:51255317-51255336 Msa0774740:CDS 30.0%
TTGACATGAATTCATTGATG+CGG - chr5_2:51255460-51255479 Msa0774740:CDS 30.0%
TTAGAATTGGCATTTCTGTT+GGG + chr5_2:51254012-51254031 None:intergenic 30.0%
GAAATGCCAATTCTAACATT+TGG - chr5_2:51254016-51254035 Msa0774740:CDS 30.0%
GAATGACCAAATGTTAGAAT+TGG + chr5_2:51254025-51254044 None:intergenic 30.0%
TAATTTCAGATAAACTCGGA+CGG + chr5_2:51254243-51254262 None:intergenic 30.0%
!!! TGTTGATTTTCTTCACAGTT+TGG - chr5_2:51254381-51254400 Msa0774740:CDS 30.0%
!! GTTGATTTTCTTCACAGTTT+GGG - chr5_2:51254382-51254401 Msa0774740:CDS 30.0%
! TTGATTTTCTTCACAGTTTG+GGG - chr5_2:51254383-51254402 Msa0774740:CDS 30.0%
ATGTAGTGTCAAGAAGAATA+TGG - chr5_2:51254447-51254466 Msa0774740:CDS 30.0%
CTTGATTACCTTGGTAAATT+GGG - chr5_2:51254478-51254497 Msa0774740:CDS 30.0%
! ACATCTGTTGCTTATTTGAT+TGG - chr5_2:51254688-51254707 Msa0774740:CDS 30.0%
GTTGCTTATTTGATTGGAAT+CGG - chr5_2:51254694-51254713 Msa0774740:CDS 30.0%
!! GTTGATTTTCTTAAGGATTG+TGG - chr5_2:51255126-51255145 Msa0774740:CDS 30.0%
! TGTTTAAAGCAAGTAGTTGA+GGG + chr5_2:51255191-51255210 None:intergenic 30.0%
! ATGTTTAAAGCAAGTAGTTG+AGG + chr5_2:51255192-51255211 None:intergenic 30.0%
TATAAAACCTAGGCATAACA+TGG - chr5_2:51255317-51255336 Msa0774740:CDS 30.0%
TTGACATGAATTCATTGATG+CGG - chr5_2:51255460-51255479 Msa0774740:CDS 30.0%
!!! TGGGAAATTGGGTTTTGTTA+TGG + chr5_2:51253984-51254003 None:intergenic 35.0%
TAGAATTGGCATTTCTGTTG+GGG + chr5_2:51254011-51254030 None:intergenic 35.0%
GTTAGAATTGGCATTTCTGT+TGG + chr5_2:51254013-51254032 None:intergenic 35.0%
AAGATTCAATGTTCTGTTGC+TGG - chr5_2:51254115-51254134 Msa0774740:CDS 35.0%
AATTTCAGATAAACTCGGAC+GGG + chr5_2:51254242-51254261 None:intergenic 35.0%
ATAAACAATTTCACGCAACG+TGG + chr5_2:51254278-51254297 None:intergenic 35.0%
ATTGTTTATGAGTTCTTGCG+AGG - chr5_2:51254289-51254308 Msa0774740:CDS 35.0%
ATTGTTCCTGATGAACTTGA+TGG - chr5_2:51254319-51254338 Msa0774740:CDS 35.0%
TTCATAACATCAACCGTAAC+AGG + chr5_2:51254355-51254374 None:intergenic 35.0%
! TGTTACGGTTGATGTTATGA+AGG - chr5_2:51254354-51254373 Msa0774740:CDS 35.0%
TAACAACTATCCTCTTGTAC+TGG - chr5_2:51254423-51254442 Msa0774740:CDS 35.0%
AACAACTATCCTCTTGTACT+GGG - chr5_2:51254424-51254443 Msa0774740:CDS 35.0%
GCTTGATTACCTTGGTAAAT+TGG - chr5_2:51254477-51254496 Msa0774740:CDS 35.0%
ATAAGCAACAGATGTACTCA+TGG + chr5_2:51254683-51254702 None:intergenic 35.0%
TATTTGATTGGAATCGGTGT+TGG - chr5_2:51254700-51254719 Msa0774740:CDS 35.0%
GAGACACAACCTTATATTCT+TGG - chr5_2:51254856-51254875 Msa0774740:CDS 35.0%
AGGATACTGAGCAATTATAG+AGG + chr5_2:51254956-51254975 None:intergenic 35.0%
GATTTGGATGTTGAGGATTT+CGG - chr5_2:51255042-51255061 Msa0774740:CDS 35.0%
!!! GAAGCACGTTGATTTTCTTA+AGG - chr5_2:51255119-51255138 Msa0774740:CDS 35.0%
CAAATGAGGAAGATGATTGT+TGG - chr5_2:51255162-51255181 Msa0774740:CDS 35.0%
AACTCAACCAAATCTACCAA+AGG + chr5_2:51255264-51255283 None:intergenic 35.0%
AACCATAAGTGAAGAATGCT+GGG + chr5_2:51255287-51255306 None:intergenic 35.0%
AAACCATAAGTGAAGAATGC+TGG + chr5_2:51255288-51255307 None:intergenic 35.0%
AGCATTCTTCACTTATGGTT+TGG - chr5_2:51255287-51255306 Msa0774740:CDS 35.0%
TGGAGTCAACTATAAAACCT+AGG - chr5_2:51255307-51255326 Msa0774740:CDS 35.0%
CATAACATGGTTGCTAAGAA+AGG - chr5_2:51255330-51255349 Msa0774740:CDS 35.0%
TGAGAAATTTGAGCAACGAA+TGG - chr5_2:51255392-51255411 Msa0774740:CDS 35.0%
GGACTATGACACTATTGATA+TGG - chr5_2:51255413-51255432 Msa0774740:CDS 35.0%
CACTATTGATATGGAAGAGA+TGG - chr5_2:51255422-51255441 Msa0774740:CDS 35.0%
TGATATGGAAGAGATGGAAA+TGG - chr5_2:51255428-51255447 Msa0774740:CDS 35.0%
!!! TGGGAAATTGGGTTTTGTTA+TGG + chr5_2:51253984-51254003 None:intergenic 35.0%
TAGAATTGGCATTTCTGTTG+GGG + chr5_2:51254011-51254030 None:intergenic 35.0%
GTTAGAATTGGCATTTCTGT+TGG + chr5_2:51254013-51254032 None:intergenic 35.0%
AAGATTCAATGTTCTGTTGC+TGG - chr5_2:51254115-51254134 Msa0774740:CDS 35.0%
AATTTCAGATAAACTCGGAC+GGG + chr5_2:51254242-51254261 None:intergenic 35.0%
ATAAACAATTTCACGCAACG+TGG + chr5_2:51254278-51254297 None:intergenic 35.0%
ATTGTTTATGAGTTCTTGCG+AGG - chr5_2:51254289-51254308 Msa0774740:CDS 35.0%
ATTGTTCCTGATGAACTTGA+TGG - chr5_2:51254319-51254338 Msa0774740:CDS 35.0%
TTCATAACATCAACCGTAAC+AGG + chr5_2:51254355-51254374 None:intergenic 35.0%
! TGTTACGGTTGATGTTATGA+AGG - chr5_2:51254354-51254373 Msa0774740:CDS 35.0%
TAACAACTATCCTCTTGTAC+TGG - chr5_2:51254423-51254442 Msa0774740:CDS 35.0%
AACAACTATCCTCTTGTACT+GGG - chr5_2:51254424-51254443 Msa0774740:CDS 35.0%
GCTTGATTACCTTGGTAAAT+TGG - chr5_2:51254477-51254496 Msa0774740:CDS 35.0%
ATAAGCAACAGATGTACTCA+TGG + chr5_2:51254683-51254702 None:intergenic 35.0%
TATTTGATTGGAATCGGTGT+TGG - chr5_2:51254700-51254719 Msa0774740:CDS 35.0%
GAGACACAACCTTATATTCT+TGG - chr5_2:51254856-51254875 Msa0774740:CDS 35.0%
AGGATACTGAGCAATTATAG+AGG + chr5_2:51254956-51254975 None:intergenic 35.0%
GATTTGGATGTTGAGGATTT+CGG - chr5_2:51255042-51255061 Msa0774740:CDS 35.0%
!!! GAAGCACGTTGATTTTCTTA+AGG - chr5_2:51255119-51255138 Msa0774740:CDS 35.0%
CAAATGAGGAAGATGATTGT+TGG - chr5_2:51255162-51255181 Msa0774740:CDS 35.0%
AACTCAACCAAATCTACCAA+AGG + chr5_2:51255264-51255283 None:intergenic 35.0%
AACCATAAGTGAAGAATGCT+GGG + chr5_2:51255287-51255306 None:intergenic 35.0%
AAACCATAAGTGAAGAATGC+TGG + chr5_2:51255288-51255307 None:intergenic 35.0%
AGCATTCTTCACTTATGGTT+TGG - chr5_2:51255287-51255306 Msa0774740:CDS 35.0%
TGGAGTCAACTATAAAACCT+AGG - chr5_2:51255307-51255326 Msa0774740:CDS 35.0%
CATAACATGGTTGCTAAGAA+AGG - chr5_2:51255330-51255349 Msa0774740:CDS 35.0%
TGAGAAATTTGAGCAACGAA+TGG - chr5_2:51255392-51255411 Msa0774740:CDS 35.0%
GGACTATGACACTATTGATA+TGG - chr5_2:51255413-51255432 Msa0774740:CDS 35.0%
CACTATTGATATGGAAGAGA+TGG - chr5_2:51255422-51255441 Msa0774740:CDS 35.0%
TGATATGGAAGAGATGGAAA+TGG - chr5_2:51255428-51255447 Msa0774740:CDS 35.0%
AGAATTGGCATTTCTGTTGG+GGG + chr5_2:51254010-51254029 None:intergenic 40.0%
TTCAATGTTCTGTTGCTGGT+AGG - chr5_2:51254119-51254138 Msa0774740:CDS 40.0%
CTGGTAGGACGTATAGTTAT+AGG - chr5_2:51254134-51254153 Msa0774740:CDS 40.0%
AGGACGTATAGTTATAGGAC+CGG - chr5_2:51254139-51254158 Msa0774740:CDS 40.0%
CTGGCGAAATTCAAAGGAAA+CGG - chr5_2:51254194-51254213 Msa0774740:CDS 40.0%
TGGCGAAATTCAAAGGAAAC+GGG - chr5_2:51254195-51254214 Msa0774740:CDS 40.0%
AAATTCAAAGGAAACGGGGA+GGG - chr5_2:51254200-51254219 Msa0774740:CDS 40.0%
TATGAGTTCTTGCGAGGAAT+CGG - chr5_2:51254295-51254314 Msa0774740:CDS 40.0%
TCAAGACCATCAAGTTCATC+AGG + chr5_2:51254328-51254347 None:intergenic 40.0%
! TGGTCTTGAACTTCCTGTTA+CGG - chr5_2:51254339-51254358 Msa0774740:CDS 40.0%
TTACCAAGGTAATCAAGCAC+AGG + chr5_2:51254475-51254494 None:intergenic 40.0%
ACCTTGGTAAATTGGGAGTT+AGG - chr5_2:51254485-51254504 Msa0774740:CDS 40.0%
TCCTAACTCCCAATTTACCA+AGG + chr5_2:51254489-51254508 None:intergenic 40.0%
! ACACTAGAATGAAGCACTTG+TGG + chr5_2:51254544-51254563 None:intergenic 40.0%
ACAAGTGCTTCATTCTAGTG+TGG - chr5_2:51254543-51254562 Msa0774740:CDS 40.0%
AGAACACGAGGAATATCATC+CGG + chr5_2:51254619-51254638 None:intergenic 40.0%
ATATTCCTCGTGTTCTTGAG+AGG - chr5_2:51254623-51254642 Msa0774740:CDS 40.0%
AGTTTGAATCCCAACACTTC+AGG + chr5_2:51254652-51254671 None:intergenic 40.0%
! AGTGTTGGGATTCAAACTTG+AGG - chr5_2:51254654-51254673 Msa0774740:CDS 40.0%
GTGTTGGGATTCAAACTTGA+GGG - chr5_2:51254655-51254674 Msa0774740:CDS 40.0%
AGGCATCTTAACTAGATTCC+CGG - chr5_2:51254738-51254757 Msa0774740:CDS 40.0%
! AACTAGATTCCCGGAGATTT+TGG - chr5_2:51254747-51254766 Msa0774740:CDS 40.0%
! ACTAGATTCCCGGAGATTTT+GGG - chr5_2:51254748-51254767 Msa0774740:CDS 40.0%
! TAGAGTCATCAAGCCTTTTG+TGG - chr5_2:51254783-51254802 Msa0774740:CDS 40.0%
CTTTCCAGATACTCCACAAA+AGG + chr5_2:51254799-51254818 None:intergenic 40.0%
CCGAACATTAAACTCTTCGA+GGG + chr5_2:51254920-51254939 None:intergenic 40.0%
CCCTCGAAGAGTTTAATGTT+CGG - chr5_2:51254917-51254936 Msa0774740:CDS 40.0%
CTTCTCTTATCTGCAAGCTT+CGG + chr5_2:51255003-51255022 None:intergenic 40.0%
GCTCAATTCTGTGCTTGATT+TGG - chr5_2:51255026-51255045 Msa0774740:CDS 40.0%
!! TGTGCTTGATTTGGATGTTG+AGG - chr5_2:51255035-51255054 Msa0774740:CDS 40.0%
AAATCAACGTGCTTCAGCAT+AGG + chr5_2:51255114-51255133 None:intergenic 40.0%
! TAAGGATTGTGGGTTTTCTG+TGG - chr5_2:51255137-51255156 Msa0774740:CDS 40.0%
! GGTTTTCTGTGGATCAAATG+AGG - chr5_2:51255148-51255167 Msa0774740:CDS 40.0%
CGATTACTTCCAAAGTGAGA+TGG - chr5_2:51255233-51255252 Msa0774740:CDS 40.0%
ACTTCCAAAGTGAGATGGAA+AGG - chr5_2:51255238-51255257 Msa0774740:CDS 40.0%
TTCCCAGCATTCTTCACTTA+TGG - chr5_2:51255282-51255301 Msa0774740:CDS 40.0%
TTAGCAACCATGTTATGCCT+AGG + chr5_2:51255327-51255346 None:intergenic 40.0%
! GAAAGGATTGAAGTGTTCTC+TGG - chr5_2:51255347-51255366 Msa0774740:CDS 40.0%
AGAATTGGCATTTCTGTTGG+GGG + chr5_2:51254010-51254029 None:intergenic 40.0%
TTCAATGTTCTGTTGCTGGT+AGG - chr5_2:51254119-51254138 Msa0774740:CDS 40.0%
CTGGTAGGACGTATAGTTAT+AGG - chr5_2:51254134-51254153 Msa0774740:CDS 40.0%
AGGACGTATAGTTATAGGAC+CGG - chr5_2:51254139-51254158 Msa0774740:CDS 40.0%
CTGGCGAAATTCAAAGGAAA+CGG - chr5_2:51254194-51254213 Msa0774740:CDS 40.0%
TGGCGAAATTCAAAGGAAAC+GGG - chr5_2:51254195-51254214 Msa0774740:CDS 40.0%
AAATTCAAAGGAAACGGGGA+GGG - chr5_2:51254200-51254219 Msa0774740:CDS 40.0%
TATGAGTTCTTGCGAGGAAT+CGG - chr5_2:51254295-51254314 Msa0774740:CDS 40.0%
TCAAGACCATCAAGTTCATC+AGG + chr5_2:51254328-51254347 None:intergenic 40.0%
! TGGTCTTGAACTTCCTGTTA+CGG - chr5_2:51254339-51254358 Msa0774740:CDS 40.0%
TTACCAAGGTAATCAAGCAC+AGG + chr5_2:51254475-51254494 None:intergenic 40.0%
ACCTTGGTAAATTGGGAGTT+AGG - chr5_2:51254485-51254504 Msa0774740:CDS 40.0%
TCCTAACTCCCAATTTACCA+AGG + chr5_2:51254489-51254508 None:intergenic 40.0%
! ACACTAGAATGAAGCACTTG+TGG + chr5_2:51254544-51254563 None:intergenic 40.0%
ACAAGTGCTTCATTCTAGTG+TGG - chr5_2:51254543-51254562 Msa0774740:CDS 40.0%
AGAACACGAGGAATATCATC+CGG + chr5_2:51254619-51254638 None:intergenic 40.0%
ATATTCCTCGTGTTCTTGAG+AGG - chr5_2:51254623-51254642 Msa0774740:CDS 40.0%
AGTTTGAATCCCAACACTTC+AGG + chr5_2:51254652-51254671 None:intergenic 40.0%
! AGTGTTGGGATTCAAACTTG+AGG - chr5_2:51254654-51254673 Msa0774740:CDS 40.0%
GTGTTGGGATTCAAACTTGA+GGG - chr5_2:51254655-51254674 Msa0774740:CDS 40.0%
AGGCATCTTAACTAGATTCC+CGG - chr5_2:51254738-51254757 Msa0774740:CDS 40.0%
! AACTAGATTCCCGGAGATTT+TGG - chr5_2:51254747-51254766 Msa0774740:CDS 40.0%
! ACTAGATTCCCGGAGATTTT+GGG - chr5_2:51254748-51254767 Msa0774740:CDS 40.0%
! TAGAGTCATCAAGCCTTTTG+TGG - chr5_2:51254783-51254802 Msa0774740:CDS 40.0%
CTTTCCAGATACTCCACAAA+AGG + chr5_2:51254799-51254818 None:intergenic 40.0%
CCGAACATTAAACTCTTCGA+GGG + chr5_2:51254920-51254939 None:intergenic 40.0%
CCCTCGAAGAGTTTAATGTT+CGG - chr5_2:51254917-51254936 Msa0774740:CDS 40.0%
CTTCTCTTATCTGCAAGCTT+CGG + chr5_2:51255003-51255022 None:intergenic 40.0%
GCTCAATTCTGTGCTTGATT+TGG - chr5_2:51255026-51255045 Msa0774740:CDS 40.0%
!! TGTGCTTGATTTGGATGTTG+AGG - chr5_2:51255035-51255054 Msa0774740:CDS 40.0%
AAATCAACGTGCTTCAGCAT+AGG + chr5_2:51255114-51255133 None:intergenic 40.0%
! TAAGGATTGTGGGTTTTCTG+TGG - chr5_2:51255137-51255156 Msa0774740:CDS 40.0%
! GGTTTTCTGTGGATCAAATG+AGG - chr5_2:51255148-51255167 Msa0774740:CDS 40.0%
CGATTACTTCCAAAGTGAGA+TGG - chr5_2:51255233-51255252 Msa0774740:CDS 40.0%
ACTTCCAAAGTGAGATGGAA+AGG - chr5_2:51255238-51255257 Msa0774740:CDS 40.0%
TTCCCAGCATTCTTCACTTA+TGG - chr5_2:51255282-51255301 Msa0774740:CDS 40.0%
TTAGCAACCATGTTATGCCT+AGG + chr5_2:51255327-51255346 None:intergenic 40.0%
! GAAAGGATTGAAGTGTTCTC+TGG - chr5_2:51255347-51255366 Msa0774740:CDS 40.0%
GTTGGGGGAAATGGGAAATT+GGG + chr5_2:51253995-51254014 None:intergenic 45.0%
TGTTGGGGGAAATGGGAAAT+TGG + chr5_2:51253996-51254015 None:intergenic 45.0%
GCATTTCTGTTGGGGGAAAT+GGG + chr5_2:51254003-51254022 None:intergenic 45.0%
GGCGAAATTCAAAGGAAACG+GGG - chr5_2:51254196-51254215 Msa0774740:CDS 45.0%
GAAATTCAAAGGAAACGGGG+AGG - chr5_2:51254199-51254218 Msa0774740:CDS 45.0%
AATTCAAAGGAAACGGGGAG+GGG - chr5_2:51254201-51254220 Msa0774740:CDS 45.0%
ACACTACATCCCAGTACAAG+AGG + chr5_2:51254436-51254455 None:intergenic 45.0%
GTTCCTGTGCTTGATTACCT+TGG - chr5_2:51254469-51254488 Msa0774740:CDS 45.0%
GCTTCATTCTAGTGTGGTTG+TGG - chr5_2:51254549-51254568 Msa0774740:CDS 45.0%
TCAGGGGATGGATATCAAAC+CGG - chr5_2:51254597-51254616 Msa0774740:CDS 45.0%
!! TGAGAGGTATCCTGAAGTGT+TGG - chr5_2:51254639-51254658 Msa0774740:CDS 45.0%
!! GAGAGGTATCCTGAAGTGTT+GGG - chr5_2:51254640-51254659 Msa0774740:CDS 45.0%
! GGTGTTGGAAGAAGAGAACT+CGG - chr5_2:51254715-51254734 Msa0774740:CDS 45.0%
! CTAGATTCCCGGAGATTTTG+GGG - chr5_2:51254749-51254768 Msa0774740:CDS 45.0%
!! CAAGCCTTTTGTGGAGTATC+TGG - chr5_2:51254792-51254811 Msa0774740:CDS 45.0%
! TGTGGAGTATCTGGAAAGCT+TGG - chr5_2:51254801-51254820 Msa0774740:CDS 45.0%
! GTGGAGTATCTGGAAAGCTT+GGG - chr5_2:51254802-51254821 Msa0774740:CDS 45.0%
TGGAAAGCTTGGGTATTCCA+AGG - chr5_2:51254812-51254831 Msa0774740:CDS 45.0%
! AGTCTAGCAATAGCTAGCCT+TGG + chr5_2:51254832-51254851 None:intergenic 45.0%
GCCGAACATTAAACTCTTCG+AGG + chr5_2:51254921-51254940 None:intergenic 45.0%
GCTCAGTATCCTGACATCAT+TGG - chr5_2:51254964-51254983 Msa0774740:CDS 45.0%
AATCATTGAGAAGATGCCGC+AGG - chr5_2:51255068-51255087 Msa0774740:CDS 45.0%
TCAGCATAGGTGTAGTACTG+AGG + chr5_2:51255101-51255120 None:intergenic 45.0%
AAGGCCTTTCCATCTCACTT+TGG + chr5_2:51255245-51255264 None:intergenic 45.0%
AAGTGAGATGGAAAGGCCTT+TGG - chr5_2:51255245-51255264 Msa0774740:CDS 45.0%
GGAAAGGCCTTTGGTAGATT+TGG - chr5_2:51255254-51255273 Msa0774740:CDS 45.0%
! GATTGAAGTGTTCTCTGGCA+TGG - chr5_2:51255352-51255371 Msa0774740:CDS 45.0%
TGAATTCATTGATGCGGCCA+AGG - chr5_2:51255466-51255485 Msa0774740:CDS 45.0%
GAATCTGATTCATCGCTCCT+TGG + chr5_2:51255486-51255505 None:intergenic 45.0%
GTTGGGGGAAATGGGAAATT+GGG + chr5_2:51253995-51254014 None:intergenic 45.0%
TGTTGGGGGAAATGGGAAAT+TGG + chr5_2:51253996-51254015 None:intergenic 45.0%
GCATTTCTGTTGGGGGAAAT+GGG + chr5_2:51254003-51254022 None:intergenic 45.0%
GGCGAAATTCAAAGGAAACG+GGG - chr5_2:51254196-51254215 Msa0774740:CDS 45.0%
GAAATTCAAAGGAAACGGGG+AGG - chr5_2:51254199-51254218 Msa0774740:CDS 45.0%
AATTCAAAGGAAACGGGGAG+GGG - chr5_2:51254201-51254220 Msa0774740:CDS 45.0%
ACACTACATCCCAGTACAAG+AGG + chr5_2:51254436-51254455 None:intergenic 45.0%
GTTCCTGTGCTTGATTACCT+TGG - chr5_2:51254469-51254488 Msa0774740:CDS 45.0%
GCTTCATTCTAGTGTGGTTG+TGG - chr5_2:51254549-51254568 Msa0774740:CDS 45.0%
TCAGGGGATGGATATCAAAC+CGG - chr5_2:51254597-51254616 Msa0774740:CDS 45.0%
!! TGAGAGGTATCCTGAAGTGT+TGG - chr5_2:51254639-51254658 Msa0774740:CDS 45.0%
!! GAGAGGTATCCTGAAGTGTT+GGG - chr5_2:51254640-51254659 Msa0774740:CDS 45.0%
! GGTGTTGGAAGAAGAGAACT+CGG - chr5_2:51254715-51254734 Msa0774740:CDS 45.0%
! CTAGATTCCCGGAGATTTTG+GGG - chr5_2:51254749-51254768 Msa0774740:CDS 45.0%
!! CAAGCCTTTTGTGGAGTATC+TGG - chr5_2:51254792-51254811 Msa0774740:CDS 45.0%
! TGTGGAGTATCTGGAAAGCT+TGG - chr5_2:51254801-51254820 Msa0774740:CDS 45.0%
! GTGGAGTATCTGGAAAGCTT+GGG - chr5_2:51254802-51254821 Msa0774740:CDS 45.0%
TGGAAAGCTTGGGTATTCCA+AGG - chr5_2:51254812-51254831 Msa0774740:CDS 45.0%
! AGTCTAGCAATAGCTAGCCT+TGG + chr5_2:51254832-51254851 None:intergenic 45.0%
GCCGAACATTAAACTCTTCG+AGG + chr5_2:51254921-51254940 None:intergenic 45.0%
GCTCAGTATCCTGACATCAT+TGG - chr5_2:51254964-51254983 Msa0774740:CDS 45.0%
AATCATTGAGAAGATGCCGC+AGG - chr5_2:51255068-51255087 Msa0774740:CDS 45.0%
TCAGCATAGGTGTAGTACTG+AGG + chr5_2:51255101-51255120 None:intergenic 45.0%
AAGGCCTTTCCATCTCACTT+TGG + chr5_2:51255245-51255264 None:intergenic 45.0%
AAGTGAGATGGAAAGGCCTT+TGG - chr5_2:51255245-51255264 Msa0774740:CDS 45.0%
GGAAAGGCCTTTGGTAGATT+TGG - chr5_2:51255254-51255273 Msa0774740:CDS 45.0%
! GATTGAAGTGTTCTCTGGCA+TGG - chr5_2:51255352-51255371 Msa0774740:CDS 45.0%
TGAATTCATTGATGCGGCCA+AGG - chr5_2:51255466-51255485 Msa0774740:CDS 45.0%
GAATCTGATTCATCGCTCCT+TGG + chr5_2:51255486-51255505 None:intergenic 45.0%
GGCATTTCTGTTGGGGGAAA+TGG + chr5_2:51254004-51254023 None:intergenic 50.0%
AATTTCGCCAGAGTCCCGTT+TGG + chr5_2:51254185-51254204 None:intergenic 50.0%
GGGACTCTGGCGAAATTCAA+AGG - chr5_2:51254188-51254207 Msa0774740:CDS 50.0%
CCACGTTAACGCAGTTCTTG+CGG - chr5_2:51254512-51254531 Msa0774740:CDS 50.0%
TGTGGTTGTGGATCTTGTGC+CGG - chr5_2:51254561-51254580 Msa0774740:CDS 50.0%
CCCTGAAGATACTTGACCAC+CGG + chr5_2:51254583-51254602 None:intergenic 50.0%
CCGGTGGTCAAGTATCTTCA+GGG - chr5_2:51254580-51254599 Msa0774740:CDS 50.0%
CGGTGGTCAAGTATCTTCAG+GGG - chr5_2:51254581-51254600 Msa0774740:CDS 50.0%
GGTCAAGTATCTTCAGGGGA+TGG - chr5_2:51254585-51254604 Msa0774740:CDS 50.0%
GGATACCTCTCAAGAACACG+AGG + chr5_2:51254631-51254650 None:intergenic 50.0%
GTTGGAAGAAGAGAACTCGG+AGG - chr5_2:51254718-51254737 Msa0774740:CDS 50.0%
! AGGTCGGTTCCAATGATGTC+AGG + chr5_2:51254976-51254995 None:intergenic 50.0%
TATCTGCAAGCTTCGGCTCT+AGG + chr5_2:51254996-51255015 None:intergenic 50.0%
GTACTGAGGCTAACTACCTG+CGG + chr5_2:51255087-51255106 None:intergenic 50.0%
GGCATTTCTGTTGGGGGAAA+TGG + chr5_2:51254004-51254023 None:intergenic 50.0%
AATTTCGCCAGAGTCCCGTT+TGG + chr5_2:51254185-51254204 None:intergenic 50.0%
GGGACTCTGGCGAAATTCAA+AGG - chr5_2:51254188-51254207 Msa0774740:CDS 50.0%
CCACGTTAACGCAGTTCTTG+CGG - chr5_2:51254512-51254531 Msa0774740:CDS 50.0%
TGTGGTTGTGGATCTTGTGC+CGG - chr5_2:51254561-51254580 Msa0774740:CDS 50.0%
CCCTGAAGATACTTGACCAC+CGG + chr5_2:51254583-51254602 None:intergenic 50.0%
CCGGTGGTCAAGTATCTTCA+GGG - chr5_2:51254580-51254599 Msa0774740:CDS 50.0%
CGGTGGTCAAGTATCTTCAG+GGG - chr5_2:51254581-51254600 Msa0774740:CDS 50.0%
GGTCAAGTATCTTCAGGGGA+TGG - chr5_2:51254585-51254604 Msa0774740:CDS 50.0%
GGATACCTCTCAAGAACACG+AGG + chr5_2:51254631-51254650 None:intergenic 50.0%
GTTGGAAGAAGAGAACTCGG+AGG - chr5_2:51254718-51254737 Msa0774740:CDS 50.0%
! AGGTCGGTTCCAATGATGTC+AGG + chr5_2:51254976-51254995 None:intergenic 50.0%
TATCTGCAAGCTTCGGCTCT+AGG + chr5_2:51254996-51255015 None:intergenic 50.0%
GTACTGAGGCTAACTACCTG+CGG + chr5_2:51255087-51255106 None:intergenic 50.0%
! CTGATTCGCGGGGATCCAAA+CGG - chr5_2:51254167-51254186 Msa0774740:CDS 55.0%
TGATTCGCGGGGATCCAAAC+GGG - chr5_2:51254168-51254187 Msa0774740:CDS 55.0%
CCGCAAGAACTGCGTTAACG+TGG + chr5_2:51254515-51254534 None:intergenic 55.0%
GCCGGTGGTCAAGTATCTTC+AGG - chr5_2:51254579-51254598 Msa0774740:CDS 55.0%
!! TCCCGGAGATTTTGGGGATG+CGG - chr5_2:51254755-51254774 Msa0774740:CDS 55.0%
ACCCGCATCCCCAAAATCTC+CGG + chr5_2:51254760-51254779 None:intergenic 55.0%
!! GAGATTTTGGGGATGCGGGT+TGG - chr5_2:51254760-51254779 Msa0774740:CDS 55.0%
!! TGCAAGCTTCGGCTCTAGGT+CGG + chr5_2:51254992-51255011 None:intergenic 55.0%
! CTGATTCGCGGGGATCCAAA+CGG - chr5_2:51254167-51254186 Msa0774740:CDS 55.0%
TGATTCGCGGGGATCCAAAC+GGG - chr5_2:51254168-51254187 Msa0774740:CDS 55.0%
CCGCAAGAACTGCGTTAACG+TGG + chr5_2:51254515-51254534 None:intergenic 55.0%
GCCGGTGGTCAAGTATCTTC+AGG - chr5_2:51254579-51254598 Msa0774740:CDS 55.0%
!! TCCCGGAGATTTTGGGGATG+CGG - chr5_2:51254755-51254774 Msa0774740:CDS 55.0%
ACCCGCATCCCCAAAATCTC+CGG + chr5_2:51254760-51254779 None:intergenic 55.0%
!! GAGATTTTGGGGATGCGGGT+TGG - chr5_2:51254760-51254779 Msa0774740:CDS 55.0%
!! TGCAAGCTTCGGCTCTAGGT+CGG + chr5_2:51254992-51255011 None:intergenic 55.0%
GGTTGTGGATCTTGTGCCGG+TGG - chr5_2:51254564-51254583 Msa0774740:CDS 60.0%
CCCGCATCCCCAAAATCTCC+GGG + chr5_2:51254759-51254778 None:intergenic 60.0%
!! CCCGGAGATTTTGGGGATGC+GGG - chr5_2:51254756-51254775 Msa0774740:CDS 60.0%
GGTTGTGGATCTTGTGCCGG+TGG - chr5_2:51254564-51254583 Msa0774740:CDS 60.0%
CCCGCATCCCCAAAATCTCC+GGG + chr5_2:51254759-51254778 None:intergenic 60.0%
!! CCCGGAGATTTTGGGGATGC+GGG - chr5_2:51254756-51254775 Msa0774740:CDS 60.0%
!! GGACCGGTGCTGCTGATTCG+CGG - chr5_2:51254155-51254174 Msa0774740:CDS 65.0%
!! GACCGGTGCTGCTGATTCGC+GGG - chr5_2:51254156-51254175 Msa0774740:CDS 65.0%
!! ACCGGTGCTGCTGATTCGCG+GGG - chr5_2:51254157-51254176 Msa0774740:CDS 65.0%
TCCCCGCGAATCAGCAGCAC+CGG + chr5_2:51254161-51254180 None:intergenic 65.0%
CGGGGATCCAAACGGGACTC+TGG - chr5_2:51254175-51254194 Msa0774740:CDS 65.0%
!! GGACCGGTGCTGCTGATTCG+CGG - chr5_2:51254155-51254174 Msa0774740:CDS 65.0%
!! GACCGGTGCTGCTGATTCGC+GGG - chr5_2:51254156-51254175 Msa0774740:CDS 65.0%
!! ACCGGTGCTGCTGATTCGCG+GGG - chr5_2:51254157-51254176 Msa0774740:CDS 65.0%
TCCCCGCGAATCAGCAGCAC+CGG + chr5_2:51254161-51254180 None:intergenic 65.0%
CGGGGATCCAAACGGGACTC+TGG - chr5_2:51254175-51254194 Msa0774740:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 51253965 51255554 51253965 ID=Msa0774740;Name=Msa0774740
chr5_2 mRNA 51253965 51255554 51253965 ID=Msa0774740-mRNA-1;Parent=Msa0774740;Name=Msa0774740-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|529
chr5_2 exon 51253965 51255554 51253965 ID=Msa0774740-mRNA-1:exon:15251;Parent=Msa0774740-mRNA-1
chr5_2 CDS 51253965 51255554 51253965 ID=Msa0774740-mRNA-1:cds;Parent=Msa0774740-mRNA-1
Gene Sequence

>Msa0774740

ATGAACTTTTCTGGTACCATAACAAAACCCAATTTCCCATTTCCCCCAACAGAAATGCCAATTCTAACATTTGGTCATTCTAAGTTAACTGCTGCTACACTAGCTCTTCAATTGCCATGTAATTGTATTAGGAAGATAAGGTTTATTACAAAGATTCAATGTTCTGTTGCTGGTAGGACGTATAGTTATAGGACCGGTGCTGCTGATTCGCGGGGATCCAAACGGGACTCTGGCGAAATTCAAAGGAAACGGGGAGGGGCATCGTCGTTGTATGCCCGTCCGAGTTTATCTGAAATTAAGAAAGATAAGGCCACGTTGCGTGAAATTGTTTATGAGTTCTTGCGAGGAATCGGCATTGTTCCTGATGAACTTGATGGTCTTGAACTTCCTGTTACGGTTGATGTTATGAAGGAGCGTGTTGATTTTCTTCACAGTTTGGGGCTTACGATTGAAGACATTAACAACTATCCTCTTGTACTGGGATGTAGTGTCAAGAAGAATATGGTTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTTAGGAAATCCACGTTAACGCAGTTCTTGCGGAGATATCCACAAGTGCTTCATTCTAGTGTGGTTGTGGATCTTGTGCCGGTGGTCAAGTATCTTCAGGGGATGGATATCAAACCGGATGATATTCCTCGTGTTCTTGAGAGGTATCCTGAAGTGTTGGGATTCAAACTTGAGGGAACCATGAGTACATCTGTTGCTTATTTGATTGGAATCGGTGTTGGAAGAAGAGAACTCGGAGGCATCTTAACTAGATTCCCGGAGATTTTGGGGATGCGGGTTGGTAGAGTCATCAAGCCTTTTGTGGAGTATCTGGAAAGCTTGGGTATTCCAAGGCTAGCTATTGCTAGACTGATAGAGACACAACCTTATATTCTTGGATTCGATTTGGACGAGAAAGTGAAGTCAAATGTCAAATCCCTCGAAGAGTTTAATGTTCGGCAGACATTGCTTGCCTCTATAATTGCTCAGTATCCTGACATCATTGGAACCGACCTAGAGCCGAAGCTTGCAGATAAGAGAAGTGTGCTCAATTCTGTGCTTGATTTGGATGTTGAGGATTTCGGCTTAATCATTGAGAAGATGCCGCAGGTAGTTAGCCTCAGTACTACACCTATGCTGAAGCACGTTGATTTTCTTAAGGATTGTGGGTTTTCTGTGGATCAAATGAGGAAGATGATTGTTGGATGCCCTCAACTACTTGCTTTAAACATTGATATCATGAAACTTAGCTTCGATTACTTCCAAAGTGAGATGGAAAGGCCTTTGGTAGATTTGGTTGAGTTCCCAGCATTCTTCACTTATGGTTTGGAGTCAACTATAAAACCTAGGCATAACATGGTTGCTAAGAAAGGATTGAAGTGTTCTCTGGCATGGATGCTTAATTGTTCTGATGAGAAATTTGAGCAACGAATGGACTATGACACTATTGATATGGAAGAGATGGAAATGGAACCATCATTTGACATGAATTCATTGATGCGGCCAAGGAGCGATGAATCAGATTCTGATTATGAAGACAGTGATTATGATGATGATGATGATGATGATGAGTAA
Protein sequence

>Msa0774740

MNFSGTITKPNFPFPPTEMPILTFGHSKLTAATLALQLPCNCIRKIRFITKIQCSVAGRTYSYRTGAADSRGSKRDSGEIQRKRGGASSLYARPSLSEIKKDKATLREIVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLHSLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTLTQFLRRYPQVLHSSVVVDLVPVVKYLQGMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDEKVKSNVKSLEEFNVRQTLLASIIAQYPDIIGTDLEPKLADKRSVLNSVLDLDVEDFGLIIEKMPQVVSLSTTPMLKHVDFLKDCGFSVDQMRKMIVGCPQLLALNIDIMKLSFDYFQSEMERPLVDLVEFPAFFTYGLESTIKPRHNMVAKKGLKCSLAWMLNCSDEKFEQRMDYDTIDMEEMEMEPSFDMNSLMRPRSDESDSDYEDSDYDDDDDDDE*