Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775680 | sp|Q39032|PLCD1_ARATH | 55.062 | 563 | 238 | 7 | 16 | 570 | 1 | 556 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775680 | G7JZH5 | 94.444 | 576 | 30 | 2 | 1 | 575 | 1 | 575 | 0.0 | 1102 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0775680 | Msa0813140 | 0.823123 | 1.640482e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775680 | MtrunA17_Chr5g0430191 | 94.444 | 576 | 30 | 2 | 1 | 575 | 1 | 575 | 0.0 | 1102 |
| Msa0775680 | MtrunA17_Chr5g0430181 | 52.941 | 595 | 233 | 11 | 20 | 572 | 4 | 593 | 0.0 | 602 |
| Msa0775680 | MtrunA17_Chr5g0437081 | 51.852 | 594 | 240 | 12 | 17 | 572 | 3 | 588 | 0.0 | 600 |
| Msa0775680 | MtrunA17_Chr3g0113531 | 52.277 | 593 | 247 | 9 | 13 | 572 | 3 | 592 | 0.0 | 587 |
| Msa0775680 | MtrunA17_Chr3g0112551 | 50.172 | 582 | 243 | 9 | 26 | 572 | 2 | 571 | 0.0 | 545 |
| Msa0775680 | MtrunA17_Chr3g0113521 | 48.700 | 577 | 253 | 14 | 31 | 572 | 18 | 586 | 4.01e-178 | 516 |
| Msa0775680 | MtrunA17_Chr5g0437041 | 46.362 | 591 | 272 | 10 | 26 | 572 | 17 | 606 | 2.84e-176 | 511 |
| Msa0775680 | MtrunA17_Chr5g0437061 | 52.738 | 493 | 191 | 7 | 122 | 573 | 1 | 492 | 1.06e-173 | 501 |
| Msa0775680 | MtrunA17_Chr3g0113471 | 47.743 | 576 | 262 | 13 | 31 | 572 | 17 | 587 | 5.73e-171 | 498 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775680 | AT5G58670.1 | 55.062 | 563 | 238 | 7 | 16 | 570 | 1 | 556 | 0.0 | 614 |
| Msa0775680 | AT3G08510.2 | 53.807 | 591 | 225 | 10 | 17 | 572 | 3 | 580 | 0.0 | 613 |
| Msa0775680 | AT3G08510.1 | 53.807 | 591 | 225 | 10 | 17 | 572 | 3 | 580 | 0.0 | 613 |
| Msa0775680 | AT3G55940.1 | 52.137 | 585 | 247 | 7 | 17 | 572 | 3 | 583 | 0.0 | 600 |
| Msa0775680 | AT4G38530.1 | 54.189 | 561 | 245 | 10 | 16 | 570 | 1 | 555 | 0.0 | 595 |
| Msa0775680 | AT2G40116.1 | 49.754 | 609 | 259 | 9 | 8 | 572 | 7 | 612 | 0.0 | 567 |
| Msa0775680 | AT3G08510.4 | 50.937 | 587 | 219 | 10 | 17 | 572 | 3 | 551 | 0.0 | 561 |
| Msa0775680 | AT3G08510.3 | 50.937 | 587 | 219 | 10 | 17 | 572 | 3 | 551 | 0.0 | 561 |
| Msa0775680 | AT5G58700.3 | 49.745 | 589 | 258 | 10 | 20 | 572 | 10 | 596 | 0.0 | 553 |
| Msa0775680 | AT5G58700.1 | 49.745 | 589 | 258 | 10 | 20 | 572 | 10 | 596 | 0.0 | 553 |
| Msa0775680 | AT5G58690.3 | 46.771 | 573 | 282 | 10 | 20 | 572 | 8 | 577 | 6.83e-177 | 513 |
| Msa0775680 | AT5G58690.1 | 46.771 | 573 | 282 | 10 | 20 | 572 | 8 | 577 | 6.83e-177 | 513 |
| Msa0775680 | AT5G58690.2 | 48.022 | 556 | 266 | 10 | 37 | 572 | 6 | 558 | 2.36e-175 | 508 |
| Msa0775680 | AT5G58700.2 | 53.799 | 487 | 191 | 7 | 118 | 572 | 4 | 488 | 4.45e-174 | 502 |
| Msa0775680 | AT3G47290.1 | 39.074 | 540 | 288 | 14 | 43 | 573 | 24 | 531 | 2.11e-116 | 356 |
| Msa0775680 | AT3G47290.2 | 38.848 | 538 | 288 | 14 | 43 | 571 | 24 | 529 | 3.44e-112 | 346 |
| Msa0775680 | AT3G47220.1 | 38.246 | 570 | 288 | 19 | 26 | 573 | 4 | 531 | 5.95e-106 | 329 |
Find 140 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACAATGGCAACAAAATT+TGG | 0.148822 | 5_2:-52779749 | Msa0775680:exon |
| TTCATTTGATGTGAATAATT+TGG | 0.150823 | 5_2:+52778032 | None:intergenic |
| ACATCATCTTCTCTAGAATT+TGG | 0.156414 | 5_2:+52778640 | None:intergenic |
| CTTCTTCCTCTTGTATCTTT+TGG | 0.161223 | 5_2:+52777931 | None:intergenic |
| CAATAACTTTAATGTGTAAT+AGG | 0.165025 | 5_2:+52774369 | None:intergenic |
| TGGGCATTATCTTCAATTTA+TGG | 0.203485 | 5_2:-52776390 | Msa0775680:CDS |
| TGCAATTAATTAGGATGAAT+TGG | 0.230610 | 5_2:-52777591 | Msa0775680:intron |
| GCCTTCTTTCGTTATCTCTT+TGG | 0.233212 | 5_2:-52779443 | Msa0775680:CDS |
| AGTGATTAGAAAATCGAAAT+TGG | 0.251999 | 5_2:+52774213 | None:intergenic |
| AAAATATTGTTGATTTCTTC+TGG | 0.260165 | 5_2:+52779632 | None:intergenic |
| TCCATTCATAGGATCATAAT+TGG | 0.264986 | 5_2:+52776972 | None:intergenic |
| TGTCACAAAACAAACACTAT+TGG | 0.276373 | 5_2:+52779887 | None:intergenic |
| GAAGGGTGGCAATCTGAATT+TGG | 0.278897 | 5_2:-52776104 | Msa0775680:CDS |
| ATGTGTAATAGGGCCAATTC+TGG | 0.280305 | 5_2:+52774380 | None:intergenic |
| GCCAATTCTGGATAAGTTAA+TGG | 0.289150 | 5_2:+52774392 | None:intergenic |
| AATATCATTCCCATGAGTTT+TGG | 0.294974 | 5_2:+52777415 | None:intergenic |
| CAATGTTCTACACTGCCTTT+TGG | 0.297346 | 5_2:+52777500 | None:intergenic |
| GTGAACTTTATAAGCATGTT+AGG | 0.306118 | 5_2:-52774244 | Msa0775680:CDS |
| ATAAACTCTGATATAAATAT+TGG | 0.310838 | 5_2:+52779947 | None:intergenic |
| TCCATTAACTTATCCAGAAT+TGG | 0.320745 | 5_2:-52774393 | Msa0775680:CDS |
| GAGATTGTTTGAATGCCATT+AGG | 0.322747 | 5_2:-52778259 | Msa0775680:CDS |
| GATCACCTATGGGGCCATTT+AGG | 0.326314 | 5_2:+52779417 | None:intergenic |
| TATCTCTTTGGTGACCTAAA+TGG | 0.326337 | 5_2:-52779431 | Msa0775680:CDS |
| GGGTTAGTGAGTTGATATTT+TGG | 0.335878 | 5_2:+52779908 | None:intergenic |
| GGGCACAACTCCTACTTAAC+TGG | 0.341408 | 5_2:-52778748 | Msa0775680:CDS |
| CTTGTATTATGTCTTTATAT+TGG | 0.344764 | 5_2:+52779854 | None:intergenic |
| TCTTCAAAAGTTATTATAAC+AGG | 0.350189 | 5_2:+52778209 | None:intergenic |
| ATATTCTAAGCAAATTCCTT+TGG | 0.356443 | 5_2:+52777022 | None:intergenic |
| GTCACAAAACAAACACTATT+GGG | 0.359879 | 5_2:+52779888 | None:intergenic |
| TTTAGCTCCTCATTCCAAAC+TGG | 0.361381 | 5_2:+52774419 | None:intergenic |
| AGATTGTTTGAATGCCATTA+GGG | 0.371595 | 5_2:-52778258 | Msa0775680:CDS |
| GTTGAAGAGGTGGAGTTATA+TGG | 0.372195 | 5_2:+52778186 | None:intergenic |
| AATAACTTTAATGTGTAATA+GGG | 0.374082 | 5_2:+52774370 | None:intergenic |
| GCAATTAATTAGGATGAATT+GGG | 0.377967 | 5_2:-52777590 | Msa0775680:intron |
| TATTCTAAGCAAATTCCTTT+GGG | 0.392694 | 5_2:+52777023 | None:intergenic |
| TTCCTTGGTCCTAGTTACTT+TGG | 0.403790 | 5_2:+52774454 | None:intergenic |
| AAGATGAGTGGGTCCCAGTT+TGG | 0.404309 | 5_2:-52774433 | Msa0775680:CDS |
| ACTTTGGTGTCCGTATCAAC+TGG | 0.413362 | 5_2:+52774470 | None:intergenic |
| TTCTTTGGTCGGTATACTCT+AGG | 0.420475 | 5_2:+52776287 | None:intergenic |
| CCCTTCAACGATTCTGGTGA+AGG | 0.423001 | 5_2:+52778002 | None:intergenic |
| ATCAAATGCATTGTCCCTAA+TGG | 0.423947 | 5_2:+52778244 | None:intergenic |
| TCCAATTATGATCCTATGAA+TGG | 0.426154 | 5_2:-52776973 | Msa0775680:CDS |
| CCATGCATCCATCCATTCAT+AGG | 0.428096 | 5_2:+52776961 | None:intergenic |
| GCTTATAAAGTTCACCTTTG+CGG | 0.428659 | 5_2:+52774252 | None:intergenic |
| CAATTGATTTCCAGTTAAGT+AGG | 0.432841 | 5_2:+52778738 | None:intergenic |
| AAAATTTACCTGATCACCTA+TGG | 0.438210 | 5_2:+52779406 | None:intergenic |
| TATATCAGAGTTTATCCATT+CGG | 0.439764 | 5_2:-52779939 | Msa0775680:five_prime_UTR |
| CCGACCAAAGAAAACTCTTC+AGG | 0.446765 | 5_2:-52776276 | Msa0775680:intron |
| ATTACCTGTACACGAAAATC+AGG | 0.452444 | 5_2:+52776053 | None:intergenic |
| AATTTGATTTCTATACATGC+TGG | 0.454192 | 5_2:-52777527 | Msa0775680:CDS |
| AAATGGCCCCATAGGTGATC+AGG | 0.455038 | 5_2:-52779414 | Msa0775680:intron |
| TGATGGAACATGATCAAGTT+AGG | 0.457893 | 5_2:-52777475 | Msa0775680:CDS |
| CCTTCTCTTAGCTCTGATAC+AGG | 0.458858 | 5_2:+52774299 | None:intergenic |
| TTATTGTTCAATAAGATGTC+AGG | 0.460630 | 5_2:+52776323 | None:intergenic |
| GAATCCACACGTGAACCCTT+TGG | 0.470657 | 5_2:+52776997 | None:intergenic |
| AATGGTAGCATTTAATATGC+AGG | 0.472930 | 5_2:-52776932 | Msa0775680:intron |
| CAATAGAATGTTTAAGCTCA+AGG | 0.474052 | 5_2:-52779666 | Msa0775680:CDS |
| AAAACAGGTTCACGTATACA+TGG | 0.475250 | 5_2:-52776129 | Msa0775680:intron |
| CCCTTCACCAGAATCGTTGA+AGG | 0.478338 | 5_2:-52778003 | Msa0775680:CDS |
| CTCATGGGAATGATATTGTC+AGG | 0.481646 | 5_2:-52777409 | Msa0775680:intron |
| GAGTAATTGAGTTGGATTTG+TGG | 0.483851 | 5_2:-52778663 | Msa0775680:CDS |
| AGGAGTTAGAGTAATTGAGT+TGG | 0.488235 | 5_2:-52778671 | Msa0775680:CDS |
| GAGGAGGAGGATGAGACTCT+TGG | 0.488999 | 5_2:-52777557 | Msa0775680:CDS |
| TGTTTGTGTTTGTATTATGA+AGG | 0.489396 | 5_2:-52774179 | Msa0775680:three_prime_UTR |
| GAAGAAATCGCCAAAACTCA+TGG | 0.491346 | 5_2:-52777425 | Msa0775680:CDS |
| TTGATTAATGATGTCTCTTG+AGG | 0.493799 | 5_2:+52779774 | None:intergenic |
| TTCAAAGCCAATGGTGGATG+TGG | 0.497499 | 5_2:-52776359 | Msa0775680:CDS |
| CAGTGTAGAACATTGGTTGA+TGG | 0.501692 | 5_2:-52777492 | Msa0775680:CDS |
| ATGGTGGATGATATATTTAG+AGG | 0.505987 | 5_2:-52778068 | Msa0775680:CDS |
| AACATACCCACATCCACCAT+TGG | 0.508710 | 5_2:+52776352 | None:intergenic |
| TCAAGATATGAATGCTCCAT+TGG | 0.508763 | 5_2:-52778791 | Msa0775680:CDS |
| TGGGACCCACTCATCTTCCT+TGG | 0.515917 | 5_2:+52774439 | None:intergenic |
| CTCAATATATTTCAAAGAAG+AGG | 0.516565 | 5_2:-52779479 | Msa0775680:CDS |
| TATTATAACAGGATACTTTG+AGG | 0.519500 | 5_2:+52778220 | None:intergenic |
| GCGACTTTGCGTTGAAGAGG+TGG | 0.519693 | 5_2:+52778176 | None:intergenic |
| CTTTGACTTTCAGGAGACTC+CGG | 0.522060 | 5_2:+52777954 | None:intergenic |
| TGATTAATGATGTCTCTTGA+GGG | 0.522545 | 5_2:+52779775 | None:intergenic |
| CCATGGTGTTCCAGTTGATA+CGG | 0.526801 | 5_2:-52774480 | Msa0775680:CDS |
| CATTATCTTCAATTTATGGA+AGG | 0.529543 | 5_2:-52776386 | Msa0775680:CDS |
| TTGCTTAGAATATATCCAAA+GGG | 0.535506 | 5_2:-52777012 | Msa0775680:CDS |
| ATACATGCTGGGAAGCCAAA+AGG | 0.537988 | 5_2:-52777515 | Msa0775680:CDS |
| ATGGATGCATGGAGCTCAAA+TGG | 0.541893 | 5_2:-52776950 | Msa0775680:CDS |
| AAATTTACCTGATCACCTAT+GGG | 0.546547 | 5_2:+52779407 | None:intergenic |
| GGTGACCTAAATGGCCCCAT+AGG | 0.558499 | 5_2:-52779422 | Msa0775680:CDS |
| ATTTGATTTCTATACATGCT+GGG | 0.559181 | 5_2:-52777526 | Msa0775680:CDS |
| ACCAAAGAGATAACGAAAGA+AGG | 0.560155 | 5_2:+52779442 | None:intergenic |
| TTGCTTGAGGACAAAGATGA+TGG | 0.561570 | 5_2:-52777903 | Msa0775680:CDS |
| ATTGTGCAGGTTGGTATCCA+TGG | 0.563061 | 5_2:-52774497 | Msa0775680:intron |
| ATTAATGATGTCTCTTGAGG+GGG | 0.568117 | 5_2:+52779777 | None:intergenic |
| TCTGATTTCAACAAAACCAC+CGG | 0.570063 | 5_2:-52777973 | Msa0775680:CDS |
| CCTTCAACGATTCTGGTGAA+GGG | 0.570918 | 5_2:+52778003 | None:intergenic |
| CATGCTTTAGATTCACCCAA+AGG | 0.572447 | 5_2:-52777038 | Msa0775680:intron |
| TTTAATCGATTTGTTCCTAG+AGG | 0.572525 | 5_2:+52779715 | None:intergenic |
| GGAAGAAGTTGAGTTGCTTG+AGG | 0.573929 | 5_2:-52777916 | Msa0775680:CDS |
| GATTAATGATGTCTCTTGAG+GGG | 0.575049 | 5_2:+52779776 | None:intergenic |
| GGGTGATGAAAGTGAGGAGG+AGG | 0.575323 | 5_2:-52777570 | Msa0775680:CDS |
| TTTGCTTAGAATATATCCAA+AGG | 0.575916 | 5_2:-52777013 | Msa0775680:CDS |
| AAGAAATCGCCAAAACTCAT+GGG | 0.576013 | 5_2:-52777424 | Msa0775680:CDS |
| TTGGCGACTTTGCGTTGAAG+AGG | 0.577736 | 5_2:+52778173 | None:intergenic |
| ATTATGATCCTATGAATGGA+TGG | 0.583921 | 5_2:-52776969 | Msa0775680:CDS |
| CCTTCACCAGAATCGTTGAA+GGG | 0.585970 | 5_2:-52778002 | Msa0775680:CDS |
| TTAGCTCCTCATTCCAAACT+GGG | 0.586949 | 5_2:+52774420 | None:intergenic |
| ATGTGGAAGTTCGTCATGGA+GGG | 0.587464 | 5_2:-52778621 | Msa0775680:intron |
| ATTCATAGGATCATAATTGG+AGG | 0.587604 | 5_2:+52776975 | None:intergenic |
| GTGGGTCCCAGTTTGGAATG+AGG | 0.590724 | 5_2:-52774426 | Msa0775680:CDS |
| CACCAAAGTAACTAGGACCA+AGG | 0.591110 | 5_2:-52774456 | Msa0775680:CDS |
| TCAAAGCCAAAAGATACAAG+AGG | 0.594050 | 5_2:-52777937 | Msa0775680:CDS |
| GAAGGAATGTTCAAAGCCAA+TGG | 0.594868 | 5_2:-52776368 | Msa0775680:CDS |
| AAAGTAGTACAATTCATCCA+TGG | 0.596287 | 5_2:+52779580 | None:intergenic |
| TGACTGAGGTACATAGAAAG+AGG | 0.597694 | 5_2:-52774075 | Msa0775680:three_prime_UTR |
| CCTATGAATGGATGGATGCA+TGG | 0.600723 | 5_2:-52776961 | Msa0775680:CDS |
| CAAAAGGCAGTGTAGAACAT+TGG | 0.603640 | 5_2:-52777499 | Msa0775680:CDS |
| ATATTGTTGATTTCTTCTGG+TGG | 0.604922 | 5_2:+52779635 | None:intergenic |
| GTACAATTCATCCATGGTCA+TGG | 0.605855 | 5_2:+52779586 | None:intergenic |
| ATACGGACACCAAAGTAACT+AGG | 0.608090 | 5_2:-52774463 | Msa0775680:CDS |
| TTCACGTATACATGGGTGAA+GGG | 0.619188 | 5_2:-52776121 | Msa0775680:CDS |
| GTTCACGTATACATGGGTGA+AGG | 0.619514 | 5_2:-52776122 | Msa0775680:CDS |
| CCTGTATCAGAGCTAAGAGA+AGG | 0.619949 | 5_2:-52774299 | Msa0775680:CDS |
| TAGGACCAAGGAAGATGAGT+GGG | 0.620046 | 5_2:-52774444 | Msa0775680:CDS |
| CTTCACCAGAATCGTTGAAG+GGG | 0.622267 | 5_2:-52778001 | Msa0775680:CDS |
| ATATCCAAAGGGTTCACGTG+TGG | 0.629079 | 5_2:-52777001 | Msa0775680:CDS |
| GTTCGTTTATGTAACCGCAA+AGG | 0.630405 | 5_2:-52774266 | Msa0775680:CDS |
| TGACTTTCAGGAGACTCCGG+TGG | 0.638079 | 5_2:+52777957 | None:intergenic |
| GATGATGTGGAAGTTCGTCA+TGG | 0.639310 | 5_2:-52778625 | Msa0775680:CDS |
| GGAATGTTCAAAGCCAATGG+TGG | 0.642892 | 5_2:-52776365 | Msa0775680:CDS |
| TGAATTGGGTGATGAAAGTG+AGG | 0.645890 | 5_2:-52777576 | Msa0775680:CDS |
| TCATTAATCAAACACAACAA+TGG | 0.649032 | 5_2:-52779762 | Msa0775680:exon |
| AAATTCTAGAGAAGATGATG+TGG | 0.650989 | 5_2:-52778638 | Msa0775680:CDS |
| TGAACTATCTTTAATGACTG+AGG | 0.653079 | 5_2:-52774089 | Msa0775680:three_prime_UTR |
| CCGTATCAACTGGAACACCA+TGG | 0.663716 | 5_2:+52774480 | None:intergenic |
| ACGTATACATGGGTGAAGGG+TGG | 0.667080 | 5_2:-52776118 | Msa0775680:CDS |
| AAACAGGTTCACGTATACAT+GGG | 0.673316 | 5_2:-52776128 | Msa0775680:intron |
| ACCTGTACACGAAAATCAGG+CGG | 0.673633 | 5_2:+52776056 | None:intergenic |
| GATGTGGAAGTTCGTCATGG+AGG | 0.680496 | 5_2:-52778622 | Msa0775680:CDS |
| CTAGGACCAAGGAAGATGAG+TGG | 0.682226 | 5_2:-52774445 | Msa0775680:CDS |
| TCAAAGCCAATGGTGGATGT+GGG | 0.703468 | 5_2:-52776358 | Msa0775680:CDS |
| TGGATCTAGAGTCAATGATG+AGG | 0.706973 | 5_2:-52777883 | Msa0775680:intron |
| ATTGGGTGATGAAAGTGAGG+AGG | 0.710688 | 5_2:-52777573 | Msa0775680:CDS |
| AATTTACCTGATCACCTATG+GGG | 0.721386 | 5_2:+52779408 | None:intergenic |
| TAGAATGTTTAAGCTCAAGG+TGG | 0.727418 | 5_2:-52779663 | Msa0775680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATCAACAATATTTTTAAT+AGG | - | chr5_2:52774372-52774391 | Msa0775680:CDS | 10.0% |
| !! | ATATATAATTGTAATTGTTA+AGG | + | chr5_2:52775163-52775182 | None:intergenic | 10.0% |
| !!! | ATATTTGATTTTTTTATTTC+AGG | - | chr5_2:52775179-52775198 | Msa0775680:intron | 10.0% |
| !! | TGAATTTGATAAATAATTTA+GGG | - | chr5_2:52776196-52776215 | Msa0775680:intron | 10.0% |
| !!! | CTTTTTAATTTAAAAAACAA+AGG | - | chr5_2:52776289-52776308 | Msa0775680:CDS | 10.0% |
| !!! | AATATTTTTTGCAATTAATT+AGG | - | chr5_2:52776397-52776416 | Msa0775680:CDS | 10.0% |
| !! | TTAAATATAAGAAGTAAATT+AGG | - | chr5_2:52777226-52777245 | Msa0775680:intron | 10.0% |
| !! | TTCCTATTTATTTATAAATT+TGG | - | chr5_2:52777444-52777463 | Msa0775680:CDS | 10.0% |
| !! | TCCTATTTATTTATAAATTT+GGG | - | chr5_2:52777445-52777464 | Msa0775680:CDS | 10.0% |
| !!! | TATAATTTTGTTTTACTTAA+AGG | - | chr5_2:52777580-52777599 | Msa0775680:CDS | 10.0% |
| !!! | ATAATTTTGTTTTACTTAAA+GGG | - | chr5_2:52777581-52777600 | Msa0775680:CDS | 10.0% |
| !!! | TTTTTTATATTAGATATACT+TGG | + | chr5_2:52777829-52777848 | None:intergenic | 10.0% |
| !!! | TAAATATTTGAAATAATTTG+TGG | + | chr5_2:52778322-52778341 | None:intergenic | 10.0% |
| !! | TTTAATAAATAGGTATTAAT+AGG | + | chr5_2:52778776-52778795 | None:intergenic | 10.0% |
| !! | ATAAACTCTGATATAAATAT+TGG | + | chr5_2:52774053-52774072 | None:intergenic | 15.0% |
| !! | TCAAATACTACAAATTTATT+CGG | - | chr5_2:52774879-52774898 | Msa0775680:intron | 15.0% |
| !!! | AAAAGATATATGTATGTTTT+TGG | + | chr5_2:52775127-52775146 | None:intergenic | 15.0% |
| !!! | AAAAACATACATATATCTTT+TGG | - | chr5_2:52775126-52775145 | Msa0775680:intron | 15.0% |
| !!! | TTTTTAAAAACTGCATAATT+TGG | + | chr5_2:52775517-52775536 | None:intergenic | 15.0% |
| !! | ATTAATATTTATAATGCAGA+TGG | - | chr5_2:52775910-52775929 | Msa0775680:intron | 15.0% |
| !! | GTGAATTTGATAAATAATTT+AGG | - | chr5_2:52776195-52776214 | Msa0775680:intron | 15.0% |
| !!! | ATTTTGAAGTACATATTTAT+AGG | + | chr5_2:52776266-52776285 | None:intergenic | 15.0% |
| !!! | TAAAAAAAAAGTGTAACAAA+TGG | - | chr5_2:52776327-52776346 | Msa0775680:CDS | 15.0% |
| !! | AACTACATTAAAAATAATTG+AGG | + | chr5_2:52776674-52776693 | None:intergenic | 15.0% |
| !! | GTAACAATTAATTAACAATA+GGG | + | chr5_2:52776918-52776937 | None:intergenic | 15.0% |
| !! | TGTAACAATTAATTAACAAT+AGG | + | chr5_2:52776919-52776938 | None:intergenic | 15.0% |
| !!! | ATTATGAAAATAGTTTTCTT+TGG | + | chr5_2:52777335-52777354 | None:intergenic | 15.0% |
| !! | TCCCAAATTTATAAATAAAT+AGG | + | chr5_2:52777449-52777468 | None:intergenic | 15.0% |
| !! | ATAGAAATAAATAAAGTTTG+AGG | - | chr5_2:52777469-52777488 | Msa0775680:CDS | 15.0% |
| !!! | TCCATTTCTTATTTATTAAT+TGG | - | chr5_2:52777544-52777563 | Msa0775680:CDS | 15.0% |
| !!! | ATCTTTTCTTTTTTTTTTGA+AGG | - | chr5_2:52778078-52778097 | Msa0775680:intron | 15.0% |
| !!! | TAAGCAAAAATTCATTTTTT+AGG | + | chr5_2:52778671-52778690 | None:intergenic | 15.0% |
| !! | TATAAAAAATTTCATATGTG+AGG | - | chr5_2:52779113-52779132 | Msa0775680:intron | 15.0% |
| !! | AATAACTTTAATGTGTAATA+GGG | + | chr5_2:52779630-52779649 | None:intergenic | 15.0% |
| !! | CTTGTATTATGTCTTTATAT+TGG | + | chr5_2:52774146-52774165 | None:intergenic | 20.0% |
| !!! | AAAATATTGTTGATTTCTTC+TGG | + | chr5_2:52774368-52774387 | None:intergenic | 20.0% |
| !! | TTTAATAGGTATGCAAAAAA+TGG | - | chr5_2:52774386-52774405 | Msa0775680:CDS | 20.0% |
| !!! | TACTTTTTAGTTGATTTTCA+AGG | - | chr5_2:52774434-52774453 | Msa0775680:CDS | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr5_2:52774691-52774710 | None:intergenic | 20.0% |
| !! | ACATAATTCAGTGTAATTAT+AGG | - | chr5_2:52774710-52774729 | Msa0775680:intron | 20.0% |
| !!! | TTTTCAGAGCTTTTATTATT+GGG | + | chr5_2:52775305-52775324 | None:intergenic | 20.0% |
| !!! | TTTTTCAGAGCTTTTATTAT+TGG | + | chr5_2:52775306-52775325 | None:intergenic | 20.0% |
| !!! | ATAATAAAAGCTCTGAAAAA+AGG | - | chr5_2:52775306-52775325 | Msa0775680:intron | 20.0% |
| !! | TTATATATAAAGCTGAAAGT+TGG | + | chr5_2:52775660-52775679 | None:intergenic | 20.0% |
| !! | TCTTCAAAAGTTATTATAAC+AGG | + | chr5_2:52775791-52775810 | None:intergenic | 20.0% |
| !! | TGCAAAAAATTTACAAACTT+TGG | + | chr5_2:52775846-52775865 | None:intergenic | 20.0% |
| !!! | TTTTAGACTATGATATATAG+TGG | + | chr5_2:52775878-52775897 | None:intergenic | 20.0% |
| !! | TTCATTTGATGTGAATAATT+TGG | + | chr5_2:52775968-52775987 | None:intergenic | 20.0% |
| !!! | ATTTAATTTCACTTTGCTTA+TGG | - | chr5_2:52776145-52776164 | Msa0775680:intron | 20.0% |
| !!! | TTTAATTTCACTTTGCTTAT+GGG | - | chr5_2:52776146-52776165 | Msa0775680:intron | 20.0% |
| !!! | GTTTTATAATAACTTCCAAA+AGG | - | chr5_2:52777192-52777211 | Msa0775680:intron | 20.0% |
| !!! | TTAATTATAAGTTGACCTTT+TGG | + | chr5_2:52777210-52777229 | None:intergenic | 20.0% |
| !!! | ACTATTTTCATAATCACATA+TGG | - | chr5_2:52777341-52777360 | Msa0775680:intron | 20.0% |
| !! | GCCAATTAATAAATAAGAAA+TGG | + | chr5_2:52777548-52777567 | None:intergenic | 20.0% |
| !! | AATAAAAATCAAAGTGTGTT+TGG | + | chr5_2:52777919-52777938 | None:intergenic | 20.0% |
| !!! | ATTATACTTTTGATTGTGAT+TGG | - | chr5_2:52777965-52777984 | Msa0775680:CDS | 20.0% |
| !!! | ATGAAAATATCTTGTTATGA+TGG | - | chr5_2:52778105-52778124 | Msa0775680:intron | 20.0% |
| !! | AATGACACATTGATATAATT+AGG | - | chr5_2:52778424-52778443 | Msa0775680:intron | 20.0% |
| !! | ATGACACATTGATATAATTA+GGG | - | chr5_2:52778425-52778444 | Msa0775680:intron | 20.0% |
| !!! | TAAGCAAAAATTCACTTTTT+AGG | - | chr5_2:52778582-52778601 | Msa0775680:intron | 20.0% |
| !! | ATAACAACAAAACATGTTAA+AGG | + | chr5_2:52778867-52778886 | None:intergenic | 20.0% |
| !!! | TTAACATGTTTTGTTGTTAT+AGG | - | chr5_2:52778867-52778886 | Msa0775680:intron | 20.0% |
| !! | AAATTTACTTGTAGTGAAAT+AGG | - | chr5_2:52778916-52778935 | Msa0775680:intron | 20.0% |
| !! | ATATCTACCATAAGTAAATA+CGG | + | chr5_2:52779342-52779361 | None:intergenic | 20.0% |
| !!! | ACAAATAGTACATTTTAGTT+CGG | - | chr5_2:52779415-52779434 | Msa0775680:CDS | 20.0% |
| !! | CAATAACTTTAATGTGTAAT+AGG | + | chr5_2:52779631-52779650 | None:intergenic | 20.0% |
| ! | TATATCAGAGTTTATCCATT+CGG | - | chr5_2:52774058-52774077 | Msa0775680:three_prime_UTR | 25.0% |
| !!! | TGTTGTGTTTTAAGATTATC+AGG | + | chr5_2:52774174-52774193 | None:intergenic | 25.0% |
| ! | TCATTAATCAAACACAACAA+TGG | - | chr5_2:52774235-52774254 | Msa0775680:CDS | 25.0% |
| ! | TATTGAAACAAAAACAGACT+TGG | + | chr5_2:52774316-52774335 | None:intergenic | 25.0% |
| !!! | TATTGAGATGTTTTAAACTG+TGG | + | chr5_2:52774505-52774524 | None:intergenic | 25.0% |
| ! | CTCAATATATTTCAAAGAAG+AGG | - | chr5_2:52774518-52774537 | Msa0775680:intron | 25.0% |
| ! | CATAGATAATAAGGATAAAC+TGG | + | chr5_2:52774620-52774639 | None:intergenic | 25.0% |
| ! | TGATAATAAGTTATGAAGCA+CGG | + | chr5_2:52774810-52774829 | None:intergenic | 25.0% |
| !! | CCTAACTTTTGCTTATAAAT+AGG | + | chr5_2:52774987-52775006 | None:intergenic | 25.0% |
| ! | CCTATTTATAAGCAAAAGTT+AGG | - | chr5_2:52774984-52775003 | Msa0775680:intron | 25.0% |
| ! | TCAACAAAAATTGATGTATC+TGG | + | chr5_2:52775046-52775065 | None:intergenic | 25.0% |
| ! | CTCAAGTTTCTCTTATAAAT+AGG | - | chr5_2:52775066-52775085 | Msa0775680:intron | 25.0% |
| ! | TGTAATTGTTAAGGATTTAG+TGG | + | chr5_2:52775154-52775173 | None:intergenic | 25.0% |
| ! | TACAAAAAATAATGAGCCAA+TGG | + | chr5_2:52775225-52775244 | None:intergenic | 25.0% |
| !!! | CTCATTATTTTTTGTACACA+GGG | - | chr5_2:52775229-52775248 | Msa0775680:intron | 25.0% |
| !! | TATGAAGCACAAATACTTTT+CGG | - | chr5_2:52775418-52775437 | Msa0775680:intron | 25.0% |
| !! | TTTGGTGTAATTATATGTGT+TGG | + | chr5_2:52775499-52775518 | None:intergenic | 25.0% |
| ! | TATTATAACAGGATACTTTG+AGG | + | chr5_2:52775780-52775799 | None:intergenic | 25.0% |
| ! | AATATTTATAATGCAGATGG+TGG | - | chr5_2:52775913-52775932 | Msa0775680:intron | 25.0% |
| ! | TGCAATTAATTAGGATGAAT+TGG | - | chr5_2:52776406-52776425 | Msa0775680:intron | 25.0% |
| ! | GCAATTAATTAGGATGAATT+GGG | - | chr5_2:52776407-52776426 | Msa0775680:intron | 25.0% |
| !! | AATTTGATTTCTATACATGC+TGG | - | chr5_2:52776470-52776489 | Msa0775680:intron | 25.0% |
| !! | ATTTGATTTCTATACATGCT+GGG | - | chr5_2:52776471-52776490 | Msa0775680:intron | 25.0% |
| !! | GAAACCTTAATTGGTATTTT+GGG | + | chr5_2:52776759-52776778 | None:intergenic | 25.0% |
| !! | TGAAACCTTAATTGGTATTT+TGG | + | chr5_2:52776760-52776779 | None:intergenic | 25.0% |
| ! | AAGTATGATGAAACCTTAAT+TGG | + | chr5_2:52776768-52776787 | None:intergenic | 25.0% |
| ! | TATTCTAAGCAAATTCCTTT+GGG | + | chr5_2:52776977-52776996 | None:intergenic | 25.0% |
| ! | ATATTCTAAGCAAATTCCTT+TGG | + | chr5_2:52776978-52776997 | None:intergenic | 25.0% |
| ! | TTTGCTTAGAATATATCCAA+AGG | - | chr5_2:52776984-52777003 | Msa0775680:CDS | 25.0% |
| ! | TTGCTTAGAATATATCCAAA+GGG | - | chr5_2:52776985-52777004 | Msa0775680:CDS | 25.0% |
| ! | TCTCTCAATTGTCAAATAAA+TGG | + | chr5_2:52777105-52777124 | None:intergenic | 25.0% |
| !!! | CATGATACATTCTTAGTTTT+AGG | + | chr5_2:52777270-52777289 | None:intergenic | 25.0% |
| !! | ATTTTCATAATCACATATGG+CGG | - | chr5_2:52777344-52777363 | Msa0775680:intron | 25.0% |
| ! | CATTATCTTCAATTTATGGA+AGG | - | chr5_2:52777611-52777630 | Msa0775680:intron | 25.0% |
| ! | TTATTGTTCAATAAGATGTC+AGG | + | chr5_2:52777677-52777696 | None:intergenic | 25.0% |
| ! | CTTCAGTATATAAAGTAAGA+TGG | + | chr5_2:52777806-52777825 | None:intergenic | 25.0% |
| ! | ATTGTGATTGGAATGATTTA+AGG | - | chr5_2:52777977-52777996 | Msa0775680:CDS | 25.0% |
| !!! | AAGCTCTAAGATATTTTCAT+AGG | + | chr5_2:52778202-52778221 | None:intergenic | 25.0% |
| !! | TTGAAATAATTTGTGGTGTT+TGG | + | chr5_2:52778315-52778334 | None:intergenic | 25.0% |
| ! | ACATTGATATAATTAGGGTT+GGG | - | chr5_2:52778430-52778449 | Msa0775680:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | + | chr5_2:52778681-52778700 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr5_2:52778607-52778626 | Msa0775680:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | - | chr5_2:52778681-52778700 | Msa0775680:CDS | 25.0% |
| ! | ATAAATAGGTATTAATAGGC+CGG | + | chr5_2:52778772-52778791 | None:intergenic | 25.0% |
| ! | TTCAGGCATACTTTATATTA+AGG | + | chr5_2:52779004-52779023 | None:intergenic | 25.0% |
| ! | AATGACTTCACAATTATACA+GGG | + | chr5_2:52779174-52779193 | None:intergenic | 25.0% |
| ! | TAATGACTTCACAATTATAC+AGG | + | chr5_2:52779175-52779194 | None:intergenic | 25.0% |
| !! | TCTAAAACCGTATTTACTTA+TGG | - | chr5_2:52779332-52779351 | Msa0775680:intron | 25.0% |
| ! | ATATTGACACGTTATAATTG+AGG | + | chr5_2:52779482-52779501 | None:intergenic | 25.0% |
| ! | AGTGATTAGAAAATCGAAAT+TGG | + | chr5_2:52779787-52779806 | None:intergenic | 25.0% |
| ! | TGTTTGTGTTTGTATTATGA+AGG | - | chr5_2:52779818-52779837 | Msa0775680:five_prime_UTR | 25.0% |
| !!! | TTAGTGAGTTGATATTTTGG+CGG | + | chr5_2:52774089-52774108 | None:intergenic | 30.0% |
| GTCACAAAACAAACACTATT+GGG | + | chr5_2:52774112-52774131 | None:intergenic | 30.0% | |
| TGTCACAAAACAAACACTAT+TGG | + | chr5_2:52774113-52774132 | None:intergenic | 30.0% | |
| !!! | TGTTTTAAGATTATCAGGAG+TGG | + | chr5_2:52774169-52774188 | None:intergenic | 30.0% |
| TGATTAATGATGTCTCTTGA+GGG | + | chr5_2:52774225-52774244 | None:intergenic | 30.0% | |
| TTGATTAATGATGTCTCTTG+AGG | + | chr5_2:52774226-52774245 | None:intergenic | 30.0% | |
| ACAACAATGGCAACAAAATT+TGG | - | chr5_2:52774248-52774267 | Msa0775680:CDS | 30.0% | |
| !!! | TTGGTTTTAGTAAAACCTCT+AGG | - | chr5_2:52774267-52774286 | Msa0775680:CDS | 30.0% |
| !! | TTTAATCGATTTGTTCCTAG+AGG | + | chr5_2:52774285-52774304 | None:intergenic | 30.0% |
| CAATAGAATGTTTAAGCTCA+AGG | - | chr5_2:52774331-52774350 | Msa0775680:CDS | 30.0% | |
| !! | ATATTGTTGATTTCTTCTGG+TGG | + | chr5_2:52774365-52774384 | None:intergenic | 30.0% |
| AAAGTAGTACAATTCATCCA+TGG | + | chr5_2:52774420-52774439 | None:intergenic | 30.0% | |
| !! | AGTTGATTTTCAAGGAGAAA+AGG | - | chr5_2:52774442-52774461 | Msa0775680:CDS | 30.0% |
| !! | GTTGATTTTCAAGGAGAAAA+GGG | - | chr5_2:52774443-52774462 | Msa0775680:CDS | 30.0% |
| ! | AACATCTTGAGCATGTTTTT+GGG | + | chr5_2:52774480-52774499 | None:intergenic | 30.0% |
| ! | AAACATCTTGAGCATGTTTT+TGG | + | chr5_2:52774481-52774500 | None:intergenic | 30.0% |
| AAATTTACCTGATCACCTAT+GGG | + | chr5_2:52774593-52774612 | None:intergenic | 30.0% | |
| AAAATTTACCTGATCACCTA+TGG | + | chr5_2:52774594-52774613 | None:intergenic | 30.0% | |
| TCCTTATTATCTATGAAGCA+CGG | - | chr5_2:52774625-52774644 | Msa0775680:intron | 30.0% | |
| TTCAGTGTAATTATAGGTGA+CGG | - | chr5_2:52774716-52774735 | Msa0775680:intron | 30.0% | |
| TATCAAAATTATACTCCCTC+TGG | - | chr5_2:52774960-52774979 | Msa0775680:intron | 30.0% | |
| GTTTCTCTTATAAATAGGAC+CGG | - | chr5_2:52775071-52775090 | Msa0775680:intron | 30.0% | |
| !!! | TGTATGTTTTTGGCTCTATT+TGG | + | chr5_2:52775117-52775136 | None:intergenic | 30.0% |
| !!! | GCTCATTATTTTTTGTACAC+AGG | - | chr5_2:52775228-52775247 | Msa0775680:intron | 30.0% |
| ! | CAATTGATTTCCAGTTAAGT+AGG | + | chr5_2:52775262-52775281 | None:intergenic | 30.0% |
| !! | ACATCATCTTCTCTAGAATT+TGG | + | chr5_2:52775360-52775379 | None:intergenic | 30.0% |
| ! | AAATTCTAGAGAAGATGATG+TGG | - | chr5_2:52775359-52775378 | Msa0775680:intron | 30.0% |
| TATTGAAAACCTATGAAGCA+CGG | + | chr5_2:52775585-52775604 | None:intergenic | 30.0% | |
| TCAACAATGTGCTACAATAT+TGG | + | chr5_2:52775624-52775643 | None:intergenic | 30.0% | |
| !!! | TTGACTTATTTTTGAGCTGT+AGG | - | chr5_2:52775690-52775709 | Msa0775680:intron | 30.0% |
| AGATTGTTTGAATGCCATTA+GGG | - | chr5_2:52775739-52775758 | Msa0775680:intron | 30.0% | |
| !! | ATGGTGGATGATATATTTAG+AGG | - | chr5_2:52775929-52775948 | Msa0775680:intron | 30.0% |
| ! | GCTGATTCAAGATATACTAT+AGG | + | chr5_2:52776354-52776373 | None:intergenic | 30.0% |
| ATAGTATATCTTGAATCAGC+TGG | - | chr5_2:52776354-52776373 | Msa0775680:CDS | 30.0% | |
| TAGTATATCTTGAATCAGCT+GGG | - | chr5_2:52776355-52776374 | Msa0775680:CDS | 30.0% | |
| ! | AATATCATTCCCATGAGTTT+TGG | + | chr5_2:52776585-52776604 | None:intergenic | 30.0% |
| CTAACCCAAAATACCAATTA+AGG | - | chr5_2:52776752-52776771 | Msa0775680:intron | 30.0% | |
| ATCATACTTCAAGCTTGTAT+TGG | - | chr5_2:52776779-52776798 | Msa0775680:intron | 30.0% | |
| TCATACTTCAAGCTTGTATT+GGG | - | chr5_2:52776780-52776799 | Msa0775680:intron | 30.0% | |
| TGATGTAGTGTACTTATACA+AGG | + | chr5_2:52776820-52776839 | None:intergenic | 30.0% | |
| CCAAACAATTCTTGCATATA+TGG | + | chr5_2:52776854-52776873 | None:intergenic | 30.0% | |
| CCATATATGCAAGAATTGTT+TGG | - | chr5_2:52776851-52776870 | Msa0775680:intron | 30.0% | |
| ATTCATAGGATCATAATTGG+AGG | + | chr5_2:52777025-52777044 | None:intergenic | 30.0% | |
| TCCAATTATGATCCTATGAA+TGG | - | chr5_2:52777024-52777043 | Msa0775680:CDS | 30.0% | |
| TCCATTCATAGGATCATAAT+TGG | + | chr5_2:52777028-52777047 | None:intergenic | 30.0% | |
| ATTATGATCCTATGAATGGA+TGG | - | chr5_2:52777028-52777047 | Msa0775680:CDS | 30.0% | |
| AATGGTAGCATTTAATATGC+AGG | - | chr5_2:52777065-52777084 | Msa0775680:intron | 30.0% | |
| TGGATGCAAGTTGTTATAAT+AGG | + | chr5_2:52777315-52777334 | None:intergenic | 30.0% | |
| ATAACATACGAACAATTGCA+TGG | + | chr5_2:52777407-52777426 | None:intergenic | 30.0% | |
| !!! | AAGTTTGAGGATTTTTTTGC+AGG | - | chr5_2:52777482-52777501 | Msa0775680:CDS | 30.0% |
| !!! | AGTTTGAGGATTTTTTTGCA+GGG | - | chr5_2:52777483-52777502 | Msa0775680:CDS | 30.0% |
| !! | TTGTTTTACTTAAAGGGACA+TGG | - | chr5_2:52777587-52777606 | Msa0775680:intron | 30.0% |
| ! | TGTTTTACTTAAAGGGACAT+GGG | - | chr5_2:52777588-52777607 | Msa0775680:intron | 30.0% |
| TGGGCATTATCTTCAATTTA+TGG | - | chr5_2:52777607-52777626 | Msa0775680:intron | 30.0% | |
| ! | TTTACCTGAAGAGTTTTCTT+TGG | + | chr5_2:52777728-52777747 | None:intergenic | 30.0% |
| AAAGAAAACTCTTCAGGTAA+AGG | - | chr5_2:52777727-52777746 | Msa0775680:intron | 30.0% | |
| AAGAAAACTCTTCAGGTAAA+GGG | - | chr5_2:52777728-52777747 | Msa0775680:intron | 30.0% | |
| GTACTTATGAGACTATATGA+TGG | - | chr5_2:52778042-52778061 | Msa0775680:CDS | 30.0% | |
| ! | TATTTTCATAGGCAATCTTG+AGG | + | chr5_2:52778191-52778210 | None:intergenic | 30.0% |
| CACATTGATATAATTAGGGT+TGG | - | chr5_2:52778429-52778448 | Msa0775680:intron | 30.0% | |
| ATATAATTAGGGTTGGGAAT+AGG | - | chr5_2:52778436-52778455 | Msa0775680:intron | 30.0% | |
| ! | TTTCTAAAAAGTCTAAGCCT+AGG | + | chr5_2:52778540-52778559 | None:intergenic | 30.0% |
| !! | TTTTTAGAAAGTACACCTTC+CGG | - | chr5_2:52778550-52778569 | Msa0775680:intron | 30.0% |
| CATTCAATAAATGATGCATG+TGG | + | chr5_2:52778646-52778665 | None:intergenic | 30.0% | |
| GGGTGTATGTTTAGTTAAAT+AGG | - | chr5_2:52778705-52778724 | Msa0775680:CDS | 30.0% | |
| TAGTTAAATAGGTCAGACTT+AGG | - | chr5_2:52778716-52778735 | Msa0775680:CDS | 30.0% | |
| AAAAGTCTGTTAAGCCTAAT+AGG | - | chr5_2:52778746-52778765 | Msa0775680:CDS | 30.0% | |
| !! | GTTGTTATAGGCTTTTAAGT+AGG | - | chr5_2:52778879-52778898 | Msa0775680:intron | 30.0% |
| !! | AGTGAAATAGGCTTTTAAGT+AGG | - | chr5_2:52778928-52778947 | Msa0775680:intron | 30.0% |
| GTTCATTTGACCTACTAAAT+AGG | + | chr5_2:52778971-52778990 | None:intergenic | 30.0% | |
| TATAAAGTATGCCTGAAAGT+AGG | - | chr5_2:52779007-52779026 | Msa0775680:intron | 30.0% | |
| !!! | ATTTTTTATAAGCCTGAGTC+TGG | + | chr5_2:52779103-52779122 | None:intergenic | 30.0% |
| ATGACTTCACAATTATACAG+GGG | + | chr5_2:52779173-52779192 | None:intergenic | 30.0% | |
| ACTTGAAAGAAACAAGTGTA+GGG | + | chr5_2:52779208-52779227 | None:intergenic | 30.0% | |
| TACTTGAAAGAAACAAGTGT+AGG | + | chr5_2:52779209-52779228 | None:intergenic | 30.0% | |
| ! | CTTCAATTTTCATGTTTGTG+GGG | + | chr5_2:52779287-52779306 | None:intergenic | 30.0% |
| ! | CCTTCAATTTTCATGTTTGT+GGG | + | chr5_2:52779288-52779307 | None:intergenic | 30.0% |
| CCACAAACATGAAAATTGAA+GGG | - | chr5_2:52779286-52779305 | Msa0775680:intron | 30.0% | |
| TCCATTAACTTATCCAGAAT+TGG | - | chr5_2:52779604-52779623 | Msa0775680:CDS | 30.0% | |
| GTGAACTTTATAAGCATGTT+AGG | - | chr5_2:52779753-52779772 | Msa0775680:exon | 30.0% | |
| TGAACTATCTTTAATGACTG+AGG | - | chr5_2:52779908-52779927 | Msa0775680:five_prime_UTR | 30.0% | |
| !!! | GGGTTAGTGAGTTGATATTT+TGG | + | chr5_2:52774092-52774111 | None:intergenic | 35.0% |
| ATTAATGATGTCTCTTGAGG+GGG | + | chr5_2:52774223-52774242 | None:intergenic | 35.0% | |
| GATTAATGATGTCTCTTGAG+GGG | + | chr5_2:52774224-52774243 | None:intergenic | 35.0% | |
| TAGAATGTTTAAGCTCAAGG+TGG | - | chr5_2:52774334-52774353 | Msa0775680:CDS | 35.0% | |
| AAAAAATGGTACCATGACCA+TGG | - | chr5_2:52774400-52774419 | Msa0775680:CDS | 35.0% | |
| ACCAAAGAGATAACGAAAGA+AGG | + | chr5_2:52774558-52774577 | None:intergenic | 35.0% | |
| ! | TATCTCTTTGGTGACCTAAA+TGG | - | chr5_2:52774566-52774585 | Msa0775680:intron | 35.0% |
| AATTTACCTGATCACCTATG+GGG | + | chr5_2:52774592-52774611 | None:intergenic | 35.0% | |
| TCCGTGCTTCATAGATAATA+AGG | + | chr5_2:52774629-52774648 | None:intergenic | 35.0% | |
| TGCTTATAAATAGGACCAGA+GGG | + | chr5_2:52774978-52774997 | None:intergenic | 35.0% | |
| TTGCTTATAAATAGGACCAG+AGG | + | chr5_2:52774979-52774998 | None:intergenic | 35.0% | |
| AAAAAGTCATATACTCCCTC+CGG | + | chr5_2:52775093-52775112 | None:intergenic | 35.0% | |
| TCAAGATATGAATGCTCCAT+TGG | - | chr5_2:52775206-52775225 | Msa0775680:intron | 35.0% | |
| AGGAGTTAGAGTAATTGAGT+TGG | - | chr5_2:52775326-52775345 | Msa0775680:intron | 35.0% | |
| !! | GAGTAATTGAGTTGGATTTG+TGG | - | chr5_2:52775334-52775353 | Msa0775680:intron | 35.0% |
| ! | GCACAAATACTTTTCGGATA+AGG | - | chr5_2:52775424-52775443 | Msa0775680:intron | 35.0% |
| GAGATTGTTTGAATGCCATT+AGG | - | chr5_2:52775738-52775757 | Msa0775680:intron | 35.0% | |
| ATCAAATGCATTGTCCCTAA+TGG | + | chr5_2:52775756-52775775 | None:intergenic | 35.0% | |
| TCTGATTTCAACAAAACCAC+CGG | - | chr5_2:52776024-52776043 | Msa0775680:intron | 35.0% | |
| !!! | ATCTTTTGGCTTTGACTTTC+AGG | + | chr5_2:52776055-52776074 | None:intergenic | 35.0% |
| TCAAAGCCAAAAGATACAAG+AGG | - | chr5_2:52776060-52776079 | Msa0775680:CDS | 35.0% | |
| ! | CTTCTTCCTCTTGTATCTTT+TGG | + | chr5_2:52776069-52776088 | None:intergenic | 35.0% |
| AGTATATCTTGAATCAGCTG+GGG | - | chr5_2:52776356-52776375 | Msa0775680:CDS | 35.0% | |
| TGATGGAACATGATCAAGTT+AGG | - | chr5_2:52776522-52776541 | Msa0775680:intron | 35.0% | |
| AAGAAATCGCCAAAACTCAT+GGG | - | chr5_2:52776573-52776592 | Msa0775680:intron | 35.0% | |
| GTAGTGTACTTATACAAGGA+TGG | + | chr5_2:52776816-52776835 | None:intergenic | 35.0% | |
| TTGACAATTGAGAGAAGAGA+AGG | - | chr5_2:52777110-52777129 | Msa0775680:intron | 35.0% | |
| TGACAATTGAGAGAAGAGAA+GGG | - | chr5_2:52777111-52777130 | Msa0775680:intron | 35.0% | |
| GAACAATTGCATGGATGAAA+AGG | + | chr5_2:52777398-52777417 | None:intergenic | 35.0% | |
| AAAACAGGTTCACGTATACA+TGG | - | chr5_2:52777868-52777887 | Msa0775680:intron | 35.0% | |
| AAACAGGTTCACGTATACAT+GGG | - | chr5_2:52777869-52777888 | Msa0775680:intron | 35.0% | |
| ATTACCTGTACACGAAAATC+AGG | + | chr5_2:52777947-52777966 | None:intergenic | 35.0% | |
| CTTGAGGAGTTTACGAAAAT+AGG | + | chr5_2:52778175-52778194 | None:intergenic | 35.0% | |
| TTAACTAAACATACACCCTC+CGG | + | chr5_2:52778703-52778722 | None:intergenic | 35.0% | |
| !! | AGGCTTTTAAGTAGGCTTTA+AGG | - | chr5_2:52778887-52778906 | Msa0775680:intron | 35.0% |
| ACCTACTAAATAGGCTAAAC+AGG | + | chr5_2:52778962-52778981 | None:intergenic | 35.0% | |
| ACCTATTTAAAAGTCTGGAC+TGG | + | chr5_2:52779041-52779060 | None:intergenic | 35.0% | |
| ! | TCCAGACTTTTAAATAGGTC+AGG | - | chr5_2:52779042-52779061 | Msa0775680:intron | 35.0% |
| ACCTGACCTATTTAAAAGTC+TGG | + | chr5_2:52779046-52779065 | None:intergenic | 35.0% | |
| CCCACAAACATGAAAATTGA+AGG | - | chr5_2:52779285-52779304 | Msa0775680:intron | 35.0% | |
| ! | CCCTTCAATTTTCATGTTTG+TGG | + | chr5_2:52779289-52779308 | None:intergenic | 35.0% |
| ATAACGTGTCAATATTGTGC+AGG | - | chr5_2:52779487-52779506 | Msa0775680:CDS | 35.0% | |
| GCCAATTCTGGATAAGTTAA+TGG | + | chr5_2:52779608-52779627 | None:intergenic | 35.0% | |
| ! | GTTATTGAACGTGACTTTTC+TGG | - | chr5_2:52779644-52779663 | Msa0775680:CDS | 35.0% |
| GCTTATAAAGTTCACCTTTG+CGG | + | chr5_2:52779748-52779767 | None:intergenic | 35.0% | |
| GTACAATTCATCCATGGTCA+TGG | + | chr5_2:52774414-52774433 | None:intergenic | 40.0% | |
| !! | GATTTTCAAGGAGAAAAGGG+TGG | - | chr5_2:52774446-52774465 | Msa0775680:CDS | 40.0% |
| GCCTTCTTTCGTTATCTCTT+TGG | - | chr5_2:52774554-52774573 | Msa0775680:intron | 40.0% | |
| ATACGAACACATACACGACA+TGG | - | chr5_2:52774648-52774667 | Msa0775680:intron | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr5_2:52775074-52775093 | Msa0775680:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr5_2:52775075-52775094 | Msa0775680:intron | 40.0% | |
| !! | TATATGTGTTGGTGTCGTGT+CGG | + | chr5_2:52775488-52775507 | None:intergenic | 40.0% |
| GTTGAAGAGGTGGAGTTATA+TGG | + | chr5_2:52775814-52775833 | None:intergenic | 40.0% | |
| ! | ATTTTCCCCTTCAACGATTC+TGG | + | chr5_2:52776004-52776023 | None:intergenic | 40.0% |
| TTGCTTGAGGACAAAGATGA+TGG | - | chr5_2:52776094-52776113 | Msa0775680:CDS | 40.0% | |
| ! | TGGATCTAGAGTCAATGATG+AGG | - | chr5_2:52776114-52776133 | Msa0775680:CDS | 40.0% |
| ! | GCTTATGGGCTTGTTTGTTA+AGG | - | chr5_2:52776160-52776179 | Msa0775680:intron | 40.0% |
| TGAATTGGGTGATGAAAGTG+AGG | - | chr5_2:52776421-52776440 | Msa0775680:intron | 40.0% | |
| ! | CAATGTTCTACACTGCCTTT+TGG | + | chr5_2:52776500-52776519 | None:intergenic | 40.0% |
| CAAAAGGCAGTGTAGAACAT+TGG | - | chr5_2:52776498-52776517 | Msa0775680:intron | 40.0% | |
| ! | CAGTGTAGAACATTGGTTGA+TGG | - | chr5_2:52776505-52776524 | Msa0775680:intron | 40.0% |
| GAAGAAATCGCCAAAACTCA+TGG | - | chr5_2:52776572-52776591 | Msa0775680:intron | 40.0% | |
| CTCATGGGAATGATATTGTC+AGG | - | chr5_2:52776588-52776607 | Msa0775680:intron | 40.0% | |
| ! | GGTGAATCTAAAGCATGGAA+TGG | + | chr5_2:52776956-52776975 | None:intergenic | 40.0% |
| ! | CTTTGGGTGAATCTAAAGCA+TGG | + | chr5_2:52776961-52776980 | None:intergenic | 40.0% |
| ! | CATGCTTTAGATTCACCCAA+AGG | - | chr5_2:52776959-52776978 | Msa0775680:CDS | 40.0% |
| TGCATGGATGAAAAGGTCTT+AGG | + | chr5_2:52777391-52777410 | None:intergenic | 40.0% | |
| ! | GCATGTTAACTAGTGTCACT+AGG | - | chr5_2:52777505-52777524 | Msa0775680:CDS | 40.0% |
| GAAGGAATGTTCAAAGCCAA+TGG | - | chr5_2:52777629-52777648 | Msa0775680:intron | 40.0% | |
| TTCTTTGGTCGGTATACTCT+AGG | + | chr5_2:52777713-52777732 | None:intergenic | 40.0% | |
| ! | CCTGAAGAGTTTTCTTTGGT+CGG | + | chr5_2:52777724-52777743 | None:intergenic | 40.0% |
| TTCACGTATACATGGGTGAA+GGG | - | chr5_2:52777876-52777895 | Msa0775680:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+AGG | + | chr5_2:52778685-52778704 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | - | chr5_2:52778684-52778703 | Msa0775680:CDS | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | - | chr5_2:52778685-52778704 | Msa0775680:CDS | 40.0% | |
| TATTAATAGGCCGGCCTATT+AGG | + | chr5_2:52778763-52778782 | None:intergenic | 40.0% | |
| GCCTGTTTAGCCTATTTAGT+AGG | - | chr5_2:52778958-52778977 | Msa0775680:intron | 40.0% | |
| ! | GCCAGTCCAGACTTTTAAAT+AGG | - | chr5_2:52779037-52779056 | Msa0775680:intron | 40.0% |
| TCAGGTCAGACCAAGAAAAA+CGG | - | chr5_2:52779060-52779079 | Msa0775680:intron | 40.0% | |
| !!! | CTATCATAGGCCGTTTTTCT+TGG | + | chr5_2:52779073-52779092 | None:intergenic | 40.0% |
| CAAGAAAAACGGCCTATGAT+AGG | - | chr5_2:52779071-52779090 | Msa0775680:intron | 40.0% | |
| GGCTCATGTTTATCAAAGTC+TGG | - | chr5_2:52779134-52779153 | Msa0775680:intron | 40.0% | |
| CTTCACAATTATACAGGGGT+GGG | + | chr5_2:52779169-52779188 | None:intergenic | 40.0% | |
| ACTTCACAATTATACAGGGG+TGG | + | chr5_2:52779170-52779189 | None:intergenic | 40.0% | |
| ATACGGACACCAAAGTAACT+AGG | - | chr5_2:52779534-52779553 | Msa0775680:CDS | 40.0% | |
| TTCCTTGGTCCTAGTTACTT+TGG | + | chr5_2:52779546-52779565 | None:intergenic | 40.0% | |
| TTAGCTCCTCATTCCAAACT+GGG | + | chr5_2:52779580-52779599 | None:intergenic | 40.0% | |
| ! | TTTAGCTCCTCATTCCAAAC+TGG | + | chr5_2:52779581-52779600 | None:intergenic | 40.0% |
| ATGTGTAATAGGGCCAATTC+TGG | + | chr5_2:52779620-52779639 | None:intergenic | 40.0% | |
| ! | TCTGGACAACATGATTTTGC+TGG | - | chr5_2:52779662-52779681 | Msa0775680:CDS | 40.0% |
| GTTCGTTTATGTAACCGCAA+AGG | - | chr5_2:52779731-52779750 | Msa0775680:CDS | 40.0% | |
| TGACTGAGGTACATAGAAAG+AGG | - | chr5_2:52779922-52779941 | Msa0775680:five_prime_UTR | 40.0% | |
| !! | ATTTTGGCGGATGAACCGAA+TGG | + | chr5_2:52774076-52774095 | None:intergenic | 45.0% |
| GATGATGTGGAAGTTCGTCA+TGG | - | chr5_2:52775372-52775391 | Msa0775680:intron | 45.0% | |
| ATGTGGAAGTTCGTCATGGA+GGG | - | chr5_2:52775376-52775395 | Msa0775680:intron | 45.0% | |
| ATACGACACGTGTCTAACAC+GGG | + | chr5_2:52775456-52775475 | None:intergenic | 45.0% | |
| GATACGACACGTGTCTAACA+CGG | + | chr5_2:52775457-52775476 | None:intergenic | 45.0% | |
| AACCTATGAAGCACGGATAC+CGG | + | chr5_2:52775578-52775597 | None:intergenic | 45.0% | |
| CCTTCAACGATTCTGGTGAA+GGG | + | chr5_2:52775997-52776016 | None:intergenic | 45.0% | |
| CCTTCACCAGAATCGTTGAA+GGG | - | chr5_2:52775995-52776014 | Msa0775680:intron | 45.0% | |
| CTTCACCAGAATCGTTGAAG+GGG | - | chr5_2:52775996-52776015 | Msa0775680:intron | 45.0% | |
| ! | CTTTGACTTTCAGGAGACTC+CGG | + | chr5_2:52776046-52776065 | None:intergenic | 45.0% |
| ! | GGAAGAAGTTGAGTTGCTTG+AGG | - | chr5_2:52776081-52776100 | Msa0775680:CDS | 45.0% |
| ATTGGGTGATGAAAGTGAGG+AGG | - | chr5_2:52776424-52776443 | Msa0775680:intron | 45.0% | |
| ATACATGCTGGGAAGCCAAA+AGG | - | chr5_2:52776482-52776501 | Msa0775680:intron | 45.0% | |
| ATATCCAAAGGGTTCACGTG+TGG | - | chr5_2:52776996-52777015 | Msa0775680:CDS | 45.0% | |
| CCATGCATCCATCCATTCAT+AGG | + | chr5_2:52777039-52777058 | None:intergenic | 45.0% | |
| CCTATGAATGGATGGATGCA+TGG | - | chr5_2:52777036-52777055 | Msa0775680:intron | 45.0% | |
| ATGGATGCATGGAGCTCAAA+TGG | - | chr5_2:52777047-52777066 | Msa0775680:intron | 45.0% | |
| GGAATGTTCAAAGCCAATGG+TGG | - | chr5_2:52777632-52777651 | Msa0775680:intron | 45.0% | |
| !! | TTCAAAGCCAATGGTGGATG+TGG | - | chr5_2:52777638-52777657 | Msa0775680:intron | 45.0% |
| !! | TCAAAGCCAATGGTGGATGT+GGG | - | chr5_2:52777639-52777658 | Msa0775680:intron | 45.0% |
| AACATACCCACATCCACCAT+TGG | + | chr5_2:52777648-52777667 | None:intergenic | 45.0% | |
| CCGACCAAAGAAAACTCTTC+AGG | - | chr5_2:52777721-52777740 | Msa0775680:intron | 45.0% | |
| CTCTTCAGGTAAAGGGAATG+TGG | - | chr5_2:52777735-52777754 | Msa0775680:intron | 45.0% | |
| GTTCACGTATACATGGGTGA+AGG | - | chr5_2:52777875-52777894 | Msa0775680:intron | 45.0% | |
| GAAGGGTGGCAATCTGAATT+TGG | - | chr5_2:52777893-52777912 | Msa0775680:CDS | 45.0% | |
| ACCTGTACACGAAAATCAGG+CGG | + | chr5_2:52777944-52777963 | None:intergenic | 45.0% | |
| ! | GCCTAGCATGTTTAGTGGAT+AGG | - | chr5_2:52778514-52778533 | Msa0775680:intron | 45.0% |
| GCCTATCCACTAAACATGCT+AGG | + | chr5_2:52778518-52778537 | None:intergenic | 45.0% | |
| ! | CATGTTTAGTGGATAGGCCT+AGG | - | chr5_2:52778520-52778539 | Msa0775680:intron | 45.0% |
| GTCTGTTAAGCCTAATAGGC+CGG | - | chr5_2:52778750-52778769 | Msa0775680:CDS | 45.0% | |
| AAACGGCCTATGATAGGTCT+AGG | - | chr5_2:52779077-52779096 | Msa0775680:intron | 45.0% | |
| ACAATTATACAGGGGTGGGA+AGG | + | chr5_2:52779165-52779184 | None:intergenic | 45.0% | |
| CGTGTCAATATTGTGCAGGT+TGG | - | chr5_2:52779491-52779510 | Msa0775680:CDS | 45.0% | |
| !! | ATTGTGCAGGTTGGTATCCA+TGG | - | chr5_2:52779500-52779519 | Msa0775680:CDS | 45.0% |
| ! | CCATGGTGTTCCAGTTGATA+CGG | - | chr5_2:52779517-52779536 | Msa0775680:CDS | 45.0% |
| !! | ACTTTGGTGTCCGTATCAAC+TGG | + | chr5_2:52779530-52779549 | None:intergenic | 45.0% |
| CACCAAAGTAACTAGGACCA+AGG | - | chr5_2:52779541-52779560 | Msa0775680:CDS | 45.0% | |
| TAGGACCAAGGAAGATGAGT+GGG | - | chr5_2:52779553-52779572 | Msa0775680:CDS | 45.0% | |
| !! | CCTTCTCTTAGCTCTGATAC+AGG | + | chr5_2:52779701-52779720 | None:intergenic | 45.0% |
| CCTGTATCAGAGCTAAGAGA+AGG | - | chr5_2:52779698-52779717 | Msa0775680:CDS | 45.0% | |
| !! | AAAAAAAAAAAAAATAAAAC+AGG | - | chr5_2:52777853-52777872 | Msa0775680:intron | 5.0% |
| !! | ATTTATTTCAAATATATTTA+CGG | + | chr5_2:52778407-52778426 | None:intergenic | 5.0% |
| !!! | AAAAACATTTTTTAATAAAT+AGG | + | chr5_2:52778786-52778805 | None:intergenic | 5.0% |
| GATCACCTATGGGGCCATTT+AGG | + | chr5_2:52774583-52774602 | None:intergenic | 50.0% | |
| AAATGGCCCCATAGGTGATC+AGG | - | chr5_2:52774583-52774602 | Msa0775680:intron | 50.0% | |
| ! | TATAGGTGACGGTGTCGAGT+CGG | - | chr5_2:52774727-52774746 | Msa0775680:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | + | chr5_2:52774799-52774818 | None:intergenic | 50.0% | |
| GGGCACAACTCCTACTTAAC+TGG | - | chr5_2:52775249-52775268 | Msa0775680:intron | 50.0% | |
| GATGTGGAAGTTCGTCATGG+AGG | - | chr5_2:52775375-52775394 | Msa0775680:intron | 50.0% | |
| TACGACACGTGTCTAACACG+GGG | + | chr5_2:52775455-52775474 | None:intergenic | 50.0% | |
| TTGGCGACTTTGCGTTGAAG+AGG | + | chr5_2:52775827-52775846 | None:intergenic | 50.0% | |
| CCCTTCACCAGAATCGTTGA+AGG | - | chr5_2:52775994-52776013 | Msa0775680:intron | 50.0% | |
| CCCTTCAACGATTCTGGTGA+AGG | + | chr5_2:52775998-52776017 | None:intergenic | 50.0% | |
| GAATCCACACGTGAACCCTT+TGG | + | chr5_2:52777003-52777022 | None:intergenic | 50.0% | |
| ACGTATACATGGGTGAAGGG+TGG | - | chr5_2:52777879-52777898 | Msa0775680:intron | 50.0% | |
| ! | TCCGCCTGATTTTCGTGTAC+AGG | - | chr5_2:52777940-52777959 | Msa0775680:CDS | 50.0% |
| ATTAGGGTTGGGAATAGGCC+AGG | - | chr5_2:52778441-52778460 | Msa0775680:intron | 50.0% | |
| ACCTGGCCTAGCATGTTTAG+TGG | - | chr5_2:52778509-52778528 | Msa0775680:intron | 50.0% | |
| TCCACTAAACATGCTAGGCC+AGG | + | chr5_2:52778513-52778532 | None:intergenic | 50.0% | |
| GTCTGGCCTAGACCTATCAT+AGG | + | chr5_2:52779086-52779105 | None:intergenic | 50.0% | |
| CCGTATCAACTGGAACACCA+TGG | + | chr5_2:52779520-52779539 | None:intergenic | 50.0% | |
| CTAGGACCAAGGAAGATGAG+TGG | - | chr5_2:52779552-52779571 | Msa0775680:CDS | 50.0% | |
| AAGATGAGTGGGTCCCAGTT+TGG | - | chr5_2:52779564-52779583 | Msa0775680:CDS | 50.0% | |
| CTTGAGGGGGAGACAACACT+AGG | + | chr5_2:52774210-52774229 | None:intergenic | 55.0% | |
| GGTGACCTAAATGGCCCCAT+AGG | - | chr5_2:52774575-52774594 | Msa0775680:intron | 55.0% | |
| GGATTAGGTGTGGTGTGTCC+TGG | + | chr5_2:52774778-52774797 | None:intergenic | 55.0% | |
| GACACACCACACCTAATCCG+AGG | - | chr5_2:52774779-52774798 | Msa0775680:intron | 55.0% | |
| ! | GACACTCCTCGGATTAGGTG+TGG | + | chr5_2:52774788-52774807 | None:intergenic | 55.0% |
| !! | ATGTGTTGGTGTCGTGTCGG+CGG | + | chr5_2:52775485-52775504 | None:intergenic | 55.0% |
| GTCAGTGTCCGTTTCGTGTC+CGG | - | chr5_2:52775556-52775575 | Msa0775680:intron | 55.0% | |
| CACGGATACCGGACACGAAA+CGG | + | chr5_2:52775567-52775586 | None:intergenic | 55.0% | |
| GTCCGGTATCCGTGCTTCAT+AGG | - | chr5_2:52775573-52775592 | Msa0775680:intron | 55.0% | |
| GCGACTTTGCGTTGAAGAGG+TGG | + | chr5_2:52775824-52775843 | None:intergenic | 55.0% | |
| TGACTTTCAGGAGACTCCGG+TGG | + | chr5_2:52776043-52776062 | None:intergenic | 55.0% | |
| GGGTGATGAAAGTGAGGAGG+AGG | - | chr5_2:52776427-52776446 | Msa0775680:intron | 55.0% | |
| GAGGAGGAGGATGAGACTCT+TGG | - | chr5_2:52776440-52776459 | Msa0775680:intron | 55.0% | |
| AGGTCAAGCCAGGCCAAAAC+AGG | + | chr5_2:52778493-52778512 | None:intergenic | 55.0% | |
| !!! | TGTTTTGGCCTGGCTTGACC+TGG | - | chr5_2:52778492-52778511 | Msa0775680:intron | 55.0% |
| GATAGGTCTAGGCCAGACTC+AGG | - | chr5_2:52779088-52779107 | Msa0775680:intron | 55.0% | |
| TATACAGGGGTGGGAAGGTC+AGG | + | chr5_2:52779160-52779179 | None:intergenic | 55.0% | |
| TGGGACCCACTCATCTTCCT+TGG | + | chr5_2:52779561-52779580 | None:intergenic | 55.0% | |
| ! | GTGGGTCCCAGTTTGGAATG+AGG | - | chr5_2:52779571-52779590 | Msa0775680:CDS | 55.0% |
| ! | TGACGGTGTCGAGTCGGTGT+CGG | - | chr5_2:52774733-52774752 | Msa0775680:intron | 60.0% |
| CACGACACATGTCCGACACC+AGG | - | chr5_2:52774757-52774776 | Msa0775680:intron | 60.0% | |
| GGTGTGGTGTGTCCTGGTGT+CGG | + | chr5_2:52774772-52774791 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr5_2:52774793-52774812 | None:intergenic | 60.0% | |
| CGGACACTGACACGTCGACA+TGG | + | chr5_2:52775547-52775566 | None:intergenic | 60.0% | |
| GGGTTGGGAATAGGCCAGGT+CGG | - | chr5_2:52778445-52778464 | Msa0775680:intron | 60.0% | |
| AATAGGCCAGGTCGGCCTAC+AGG | - | chr5_2:52778453-52778472 | Msa0775680:intron | 60.0% | |
| ATAGGCCAGGTCGGCCTACA+GGG | - | chr5_2:52778454-52778473 | Msa0775680:intron | 60.0% | |
| AAGCCAGGCCAAAACAGGCC+AGG | + | chr5_2:52778488-52778507 | None:intergenic | 60.0% | |
| ATGCTAGGCCAGGTCAAGCC+AGG | + | chr5_2:52778503-52778522 | None:intergenic | 60.0% | |
| !! | TGGTGTCGTGTCGGCGGTGT+CGG | + | chr5_2:52775479-52775498 | None:intergenic | 65.0% |
| TAGGCCAGGTCGGCCTACAG+GGG | - | chr5_2:52778455-52778474 | Msa0775680:intron | 65.0% | |
| ! | GCCTACGGCCTGGCCTGTTT+TGG | - | chr5_2:52778477-52778496 | Msa0775680:intron | 65.0% |
| GCCAAAACAGGCCAGGCCGT+AGG | + | chr5_2:52778481-52778500 | None:intergenic | 65.0% | |
| TAGGCCCCTGTAGGCCGACC+TGG | + | chr5_2:52778462-52778481 | None:intergenic | 70.0% | |
| GGTCGGCCTACAGGGGCCTA+CGG | - | chr5_2:52778462-52778481 | Msa0775680:intron | 70.0% | |
| !!! | CGGCCTGGCCTGTTTTGGCC+TGG | - | chr5_2:52778482-52778501 | Msa0775680:intron | 70.0% |
| GCCTACAGGGGCCTACGGCC+TGG | - | chr5_2:52778467-52778486 | Msa0775680:intron | 75.0% | |
| GCCAGGCCGTAGGCCCCTGT+AGG | + | chr5_2:52778471-52778490 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 52774032 | 52779987 | 52774032 | ID=Msa0775680;Name=Msa0775680 |
| chr5_2 | mRNA | 52774032 | 52779987 | 52774032 | ID=Msa0775680-mRNA-1;Parent=Msa0775680;Name=Msa0775680-mRNA-1;_AED=0.09;_eAED=0.09;_QI=222|1|1|1|1|1|9|179|575 |
| chr5_2 | exon | 52774032 | 52774510 | 52774032 | ID=Msa0775680-mRNA-1:exon:15759;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52776058 | 52776144 | 52776058 | ID=Msa0775680-mRNA-1:exon:15758;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52776277 | 52776417 | 52776277 | ID=Msa0775680-mRNA-1:exon:15757;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52776933 | 52777050 | 52776933 | ID=Msa0775680-mRNA-1:exon:15756;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52777410 | 52777600 | 52777410 | ID=Msa0775680-mRNA-1:exon:15755;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52777884 | 52778090 | 52777884 | ID=Msa0775680-mRNA-1:exon:15754;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52778172 | 52778307 | 52778172 | ID=Msa0775680-mRNA-1:exon:15753;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52778622 | 52778818 | 52778622 | ID=Msa0775680-mRNA-1:exon:15752;Parent=Msa0775680-mRNA-1 |
| chr5_2 | exon | 52779415 | 52779987 | 52779415 | ID=Msa0775680-mRNA-1:exon:15751;Parent=Msa0775680-mRNA-1 |
| chr5_2 | five_prime_UTR | 52779766 | 52779987 | 52779766 | ID=Msa0775680-mRNA-1:five_prime_utr;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52779415 | 52779765 | 52779415 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52778622 | 52778818 | 52778622 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52778172 | 52778307 | 52778172 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52777884 | 52778090 | 52777884 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52777410 | 52777600 | 52777410 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52776933 | 52777050 | 52776933 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52776277 | 52776417 | 52776277 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52776058 | 52776144 | 52776058 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | CDS | 52774211 | 52774510 | 52774211 | ID=Msa0775680-mRNA-1:cds;Parent=Msa0775680-mRNA-1 |
| chr5_2 | three_prime_UTR | 52774032 | 52774210 | 52774032 | ID=Msa0775680-mRNA-1:three_prime_utr;Parent=Msa0775680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
