AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0776050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776050 MtrunA17_Chr5g0431151 98.527 1086 14 1 1 1086 1 1084 0.0 2213
Msa0776050 MtrunA17_Chr5g0431171 97.790 1086 21 1 1 1086 1 1083 0.0 2199
Msa0776050 MtrunA17_Chr0c01g0489601 84.926 743 67 5 287 1029 1 698 0.0 1252
Msa0776050 MtrunA17_Chr0c01g0489611 94.048 84 5 0 190 273 7 90 7.22e-51 173
Msa0776050 MtrunA17_Chr8g0352371 40.217 184 102 2 496 679 6 181 5.41e-34 139
Msa0776050 MtrunA17_Chr4g0074481 32.367 207 112 7 489 678 37 232 4.00e-22 100
Msa0776050 MtrunA17_Chr5g0444711 29.762 168 106 5 468 632 57 215 1.58e-14 77.4
Msa0776050 MtrunA17_Chr8g0386251 34.395 157 97 3 83 233 15 171 1.18e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776050 AT5G06460.1 81.818 1034 186 1 54 1085 43 1076 0.0 1795
Msa0776050 AT2G30110.1 83.399 1018 169 0 69 1086 63 1080 0.0 1794
Msa0776050 AT2G21470.1 38.947 190 108 2 490 679 4 185 9.76e-33 136
Msa0776050 AT2G21470.3 38.947 190 108 2 490 679 4 185 1.21e-32 135
Msa0776050 AT2G21470.2 38.947 190 108 2 490 679 4 185 2.01e-32 135
Msa0776050 AT5G19180.2 30.435 207 116 7 489 678 36 231 7.69e-21 97.1
Msa0776050 AT5G19180.1 30.622 209 117 7 487 678 34 231 8.42e-21 97.4
Msa0776050 AT5G50580.2 33.121 157 99 2 83 233 13 169 6.84e-14 74.7
Msa0776050 AT5G50680.1 33.121 157 99 2 83 233 13 169 6.84e-14 74.7
Msa0776050 AT5G50580.1 32.704 159 97 3 83 233 13 169 7.61e-14 74.3
Msa0776050 AT5G50680.2 32.704 159 97 3 83 233 13 169 7.61e-14 74.3
Msa0776050 AT4G24940.1 31.210 157 102 2 83 233 13 169 6.99e-13 71.6
Msa0776050 AT5G55130.1 30.818 159 91 5 480 632 71 216 1.67e-11 68.6

Find 283 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTTCATCCACTGTTTC+AGG 0.145935 5_2:-53512128 Msa0776050:intron
CAGATTCAAGAAGTGGTTTC+TGG 0.150804 5_2:+53510929 None:intergenic
GCATCGTAACGACTATTTAT+TGG 0.188335 5_2:+53511366 None:intergenic
CTTGATTGGCTGAAGGAAAA+AGG 0.223345 5_2:-53509467 Msa0776050:CDS
CCTTCGCTAACTCTCTTTCT+TGG 0.229281 5_2:+53516640 None:intergenic
GCGAGTAGCGTTCTTGTTTC+CGG 0.235689 5_2:-53516346 Msa0776050:CDS
CAGAAACCACTTCTTGAATC+TGG 0.245740 5_2:-53510928 Msa0776050:CDS
TGATGAGAGACTTGAGTTTC+AGG 0.248535 5_2:-53512668 Msa0776050:CDS
TCTATCGCCAGTAATATTAA+TGG 0.258312 5_2:-53512292 Msa0776050:CDS
ACAACTTCTGCCAACTTCAT+AGG 0.264036 5_2:+53510232 None:intergenic
TTTATTAAAACTGAAGTTAG+AGG 0.276986 5_2:-53512820 Msa0776050:CDS
GTTCAAAACCTTTGGTTGTT+TGG 0.277118 5_2:+53512489 None:intergenic
ATGTGTTTCATGATACCTTT+TGG 0.278407 5_2:-53511029 Msa0776050:CDS
GCCTTCAGCTTGTCAACTTC+AGG 0.281009 5_2:+53509749 None:intergenic
GCCTGAAGGCACTACGAATA+TGG 0.281023 5_2:+53509154 None:intergenic
GAAATTAGAAAGTTGTTCTT+TGG 0.281989 5_2:+53514834 None:intergenic
TTTGATTGCGGCGTCGAGTA+TGG 0.282748 5_2:-53516461 Msa0776050:CDS
TGCTCAGGCACGGGATAATT+TGG 0.285244 5_2:-53510656 Msa0776050:CDS
TAAGTTCCCATTAATATTAC+TGG 0.285590 5_2:+53512285 None:intergenic
AAAGTGTTTGTTGTTGGTTC+TGG 0.291089 5_2:-53511294 Msa0776050:CDS
AACAGCTCAACGGAAATAAA+TGG 0.294987 5_2:+53509241 None:intergenic
CTCTTCCGTGATTGGAATAT+TGG 0.300320 5_2:-53511150 Msa0776050:CDS
AGAACAACTTTCTAATTTCC+AGG 0.301087 5_2:-53514830 Msa0776050:intron
AAGATTTGAGTTGGACTGTT+TGG 0.301288 5_2:-53509532 Msa0776050:CDS
TCTATTCCTTTCTTCCTTAT+CGG 0.301668 5_2:-53516959 Msa0776050:intron
AACTATGGTGCATATGAAAA+AGG 0.303743 5_2:-53512529 Msa0776050:CDS
CGAGTAGCGTTCTTGTTTCC+GGG 0.312828 5_2:-53516345 Msa0776050:CDS
TGATGCTTGATGACCTTTGC+CGG 0.329314 5_2:+53509554 None:intergenic
GGCCACTGGCCTTGTCTGTC+TGG 0.330511 5_2:-53509675 Msa0776050:CDS
TTTCTAACTAAGATATGTTT+AGG 0.332083 5_2:+53509199 None:intergenic
TGTTGTTGGTTCTGGTGCAC+TGG 0.338371 5_2:-53511286 Msa0776050:CDS
TCATTGAGTGCTTCCCTTAG+AGG 0.339380 5_2:+53512460 None:intergenic
TTGGTATCCCTACCCCTGAC+TGG 0.344953 5_2:-53510264 Msa0776050:CDS
CACATCGGTGCTTGTTTCTC+AGG 0.346856 5_2:+53510829 None:intergenic
TTCCATGGCTGAGCCAGTTC+CGG 0.347480 5_2:-53509573 Msa0776050:CDS
AGATTTGAGTTGGACTGTTT+GGG 0.350155 5_2:-53509531 Msa0776050:CDS
GGCTTCTGTCAGTAAGCTTC+AGG 0.352053 5_2:-53514902 Msa0776050:CDS
GTTGTGTTCTCCGAAGTTCA+TGG 0.352599 5_2:-53512634 Msa0776050:CDS
GGCAGTTCCTCTTCCGTGAT+TGG 0.352745 5_2:-53511158 Msa0776050:CDS
TGATGATCTAATTGTTAAGT+TGG 0.354367 5_2:-53510101 Msa0776050:CDS
AACCCTATGGCTGCCATGTT+TGG 0.355017 5_2:-53512190 Msa0776050:CDS
GCAAAGAATCTTATTCTTGC+TGG 0.359597 5_2:-53515027 Msa0776050:CDS
CAAATCTGCAACCAGGCTTC+AGG 0.360479 5_2:-53510066 Msa0776050:CDS
CTGAAGGCCAAGTTTATTGC+TGG 0.364675 5_2:-53509734 Msa0776050:CDS
CTCTCAGGGAGCTTCTTGAT+TGG 0.364777 5_2:-53509481 Msa0776050:CDS
TCCATATTCGTAGTGCCTTC+AGG 0.366431 5_2:-53509155 Msa0776050:three_prime_UTR
TTGATGACCTTTGCCGGAAC+TGG 0.366564 5_2:+53509560 None:intergenic
GCGGCGTCGAGTATGGCTTT+TGG 0.370489 5_2:-53516454 Msa0776050:CDS
TTCATATGCACCATAGTTTG+TGG 0.370748 5_2:+53512534 None:intergenic
CTATCGCCAGTAATATTAAT+GGG 0.371055 5_2:-53512291 Msa0776050:CDS
CTTCTACAGCAATTTGCCTT+TGG 0.378864 5_2:-53512229 Msa0776050:CDS
TCCTTCTTTGGCTGAAAGTC+AGG 0.379261 5_2:+53510193 None:intergenic
TCTACTGCATCTAGCATTCC+AGG 0.380310 5_2:-53512389 Msa0776050:CDS
CTTCTTGAATCTGGAACTCT+TGG 0.385963 5_2:-53510919 Msa0776050:CDS
TTGTGTAAAGAGTGAGGGTT+TGG 0.388446 5_2:+53517036 None:intergenic
GTTTCCGGGATGCGAGGACT+TGG 0.393100 5_2:-53516331 Msa0776050:CDS
CGGCAATGAGAGAGAACGTT+TGG 0.395530 5_2:+53516989 None:intergenic
TCCACAAGAAACTCCCATTA+AGG 0.397211 5_2:+53511239 None:intergenic
AGCAGGCAGCTTGCTGTGTA+TGG 0.400305 5_2:-53516394 Msa0776050:CDS
CGTTTCGGTGCAGACCAAAA+TGG 0.402314 5_2:+53510373 None:intergenic
GAAGAAGACACCACAAACTA+TGG 0.406363 5_2:-53512544 Msa0776050:CDS
TAGAGGCTGCCATCAGAAAC+TGG 0.408365 5_2:+53510305 None:intergenic
GATAAGTTCATTTCTGAGAT+AGG 0.408784 5_2:-53512361 Msa0776050:CDS
TACCATATGGACGTGATAGC+TGG 0.413160 5_2:-53509806 Msa0776050:CDS
AAGTATGCATTTACTTCAGC+TGG 0.413743 5_2:+53510724 None:intergenic
CTAAGTTGGCAAAGGTGTTT+CGG 0.417033 5_2:+53509609 None:intergenic
GGCAAATTGCTGTAGAAGCT+TGG 0.417666 5_2:+53512234 None:intergenic
TTGGGCTCGATCTGAGTTTG+AGG 0.418168 5_2:-53510764 Msa0776050:CDS
AGTGAGGGTTTGGTTTGATT+CGG 0.418978 5_2:+53517046 None:intergenic
TCTGGAGTTGTACAAAGCTT+TGG 0.419529 5_2:-53509657 Msa0776050:CDS
GGTTTGAAGTTCAAAACCTT+TGG 0.419591 5_2:+53512481 None:intergenic
ACATTGACCACTGCTTGACT+TGG 0.423197 5_2:-53510783 Msa0776050:CDS
GCAGTTGAGGTTGCAATCGC+TGG 0.425831 5_2:+53509701 None:intergenic
ATGAAGGGACTGTAGAGTTA+TGG 0.426761 5_2:-53514981 Msa0776050:CDS
TGAAGGGACTGTAGAGTTAT+GGG 0.430566 5_2:-53514980 Msa0776050:CDS
GTTGTTGGTTCTGGTGCACT+GGG 0.430831 5_2:-53511285 Msa0776050:CDS
CTAGTACTGGAGCTCCATTT+TGG 0.431384 5_2:-53510387 Msa0776050:CDS
ATACTACGCGCAGAAACATT+TGG 0.432473 5_2:-53510283 Msa0776050:CDS
TTAGGTGGGGAATGACCATC+TGG 0.432952 5_2:+53510881 None:intergenic
GAGGTTGTCAAAGCATGCTC+TGG 0.433486 5_2:-53512151 Msa0776050:CDS
GTATGAAGGGATTTCCATCT+TGG 0.433617 5_2:+53509334 None:intergenic
GCAAATTGCTGTAGAAGCTT+GGG 0.434219 5_2:+53512235 None:intergenic
TCTCAGAAATGAACTTATCC+AGG 0.437517 5_2:+53512365 None:intergenic
AGCAATTTGCCTTTGGTGCT+AGG 0.439721 5_2:-53512222 Msa0776050:CDS
CAGCAACTGTGGACTTCGCC+TGG 0.443178 5_2:+53511127 None:intergenic
AGTGGACGAGGGAACCGTTT+CGG 0.444508 5_2:+53510358 None:intergenic
ATAGGCCGCTTCCCCGTCGC+TGG 0.451628 5_2:-53512343 Msa0776050:CDS
TAAAAGACAATCCTACTCTC+AGG 0.451668 5_2:-53509496 Msa0776050:CDS
GGAGCGCGTTCTTGAATGCT+TGG 0.453147 5_2:-53510635 Msa0776050:CDS
TGGGCTCGATCTGAGTTTGA+GGG 0.454796 5_2:-53510763 Msa0776050:CDS
TTAACCAATGTTTCTTGAGA+TGG 0.458620 5_2:-53509032 Msa0776050:three_prime_UTR
TCTGTAACCTTGCACGATGA+AGG 0.460758 5_2:-53514997 Msa0776050:CDS
CCGTGATTGGAATATTGGCC+AGG 0.460888 5_2:-53511145 Msa0776050:CDS
CAACTTCTGCCAACTTCATA+GGG 0.461246 5_2:+53510233 None:intergenic
GATGCTAAAGTGTTTGTTGT+TGG 0.462634 5_2:-53511300 Msa0776050:CDS
GCCTTAATGGGAGTTTCTTG+TGG 0.465298 5_2:-53511240 Msa0776050:CDS
CGAGGACTTGGTGCTGAGAT+TGG 0.465948 5_2:-53516319 Msa0776050:intron
GCCATGTTTGGTGGAATTGT+AGG 0.467732 5_2:-53512178 Msa0776050:CDS
GAGCTTCAATATTCAGTTGA+GGG 0.468390 5_2:+53511082 None:intergenic
TCCATCCGCTCTTTGTGCCT+AGG 0.470744 5_2:+53509389 None:intergenic
CGACGCCGCAATCAAATTCC+CGG 0.471003 5_2:+53516468 None:intergenic
GCAATTTGCCTTTGGTGCTA+GGG 0.471795 5_2:-53512221 Msa0776050:CDS
AAAGAGAGGCAGTGCTAAGT+TGG 0.472731 5_2:+53509595 None:intergenic
TCTTCCTCTGAACCAGCGAC+GGG 0.473013 5_2:+53512331 None:intergenic
AGTAATATTAATGGGAACTT+AGG 0.473212 5_2:-53512283 Msa0776050:CDS
GACGGAGAGGAACCACATAC+TGG 0.474327 5_2:-53512742 Msa0776050:CDS
GAAACATGCTATTGAAAAGC+AGG 0.474711 5_2:+53509411 None:intergenic
GGAAATAAATGGATACTTGA+GGG 0.475547 5_2:+53509252 None:intergenic
GAGGAGAACTGCAGTGGACG+AGG 0.475825 5_2:+53510346 None:intergenic
TATACCTTCTCAAACTGGAT+TGG 0.476277 5_2:+53510037 None:intergenic
ATTGGCTTCATCCTGAAGCC+TGG 0.476395 5_2:+53510055 None:intergenic
AAATGAACTTATCCAGGGCC+TGG 0.478545 5_2:+53512371 None:intergenic
GAGGATGCTGCAACTAGTAC+TGG 0.479266 5_2:-53510400 Msa0776050:CDS
GAAGTGGTTTCTGGAAATAC+AGG 0.480601 5_2:+53510938 None:intergenic
CGCTGGTGATGCTCAGGCAC+GGG 0.482562 5_2:-53510665 Msa0776050:CDS
TTGATGAGGATCTGCATAGC+AGG 0.483115 5_2:-53516411 Msa0776050:CDS
TTTGAACTTCAAACCTCTAA+GGG 0.484104 5_2:-53512473 Msa0776050:CDS
GCCCAGCTATCACGTCCATA+TGG 0.486722 5_2:+53509804 None:intergenic
TGATGATACAAACTACCATA+TGG 0.487832 5_2:-53509819 Msa0776050:CDS
ATCAGAAACTGGAGATGACT+TGG 0.488848 5_2:+53510316 None:intergenic
CACAGAAGCAGTAGAGAGAC+TGG 0.489594 5_2:+53510141 None:intergenic
TCAAGCATCAAGATTTGAGT+TGG 0.490518 5_2:-53509541 Msa0776050:CDS
CAGTCTCTCTACTGCTTCTG+TGG 0.491243 5_2:-53510140 Msa0776050:CDS
GGAGTTTCTTGTGGAGGTCA+AGG 0.491274 5_2:-53511231 Msa0776050:CDS
GCATCTAGCATTCCAGGCCC+TGG 0.491544 5_2:-53512383 Msa0776050:CDS
CAAGCAAACATACTTAAGTC+TGG 0.492461 5_2:+53510570 None:intergenic
CCCCACCTAACAGAAAACTA+TGG 0.494247 5_2:-53510868 Msa0776050:CDS
AGCAAGGGATATTGCCAAGA+TGG 0.494470 5_2:-53509348 Msa0776050:CDS
GAAGAACGCTGGTGATGCTC+AGG 0.496933 5_2:-53510671 Msa0776050:CDS
TAGAGAAGAGTAACTTAAGC+AGG 0.497531 5_2:-53511179 Msa0776050:CDS
CAACTCAGGTTCGGTTAAGA+AGG 0.499392 5_2:-53516563 Msa0776050:CDS
ATTAGTATATTCACTTGGGT+TGG 0.501780 5_2:+53510699 None:intergenic
TTTACTGTTGTTGATGTTGA+CGG 0.502308 5_2:-53512760 Msa0776050:CDS
CCACCAAACATGGCAGCCAT+AGG 0.502484 5_2:+53512187 None:intergenic
TGTTTCTGCGCGTAGTATAG+AGG 0.504143 5_2:+53510288 None:intergenic
ATGTTTAGGACACAACTGAT+TGG 0.505795 5_2:+53509213 None:intergenic
GTACTAGTTGCAGCATCCTC+AGG 0.507340 5_2:+53510403 None:intergenic
TTACTGTTGCTGTTGTTGAT+CGG 0.509874 5_2:+53516598 None:intergenic
AGAGTTCCAGATTCAAGAAG+TGG 0.510671 5_2:+53510922 None:intergenic
TTCGGTTAAGAAGGCGCGGA+TGG 0.513188 5_2:-53516554 Msa0776050:CDS
ACCTCAACTGCTATGGCCAC+TGG 0.513534 5_2:-53509689 Msa0776050:CDS
AATCTGGAAACGTACCGATA+AGG 0.515168 5_2:+53516945 None:intergenic
TCGGTAATAAAGCGATAAAG+AGG 0.515568 5_2:+53517065 None:intergenic
TTTCTCAGGTGGATCTCTTG+AGG 0.516110 5_2:+53510843 None:intergenic
GGCTGAGCCAGTTCCGGCAA+AGG 0.516192 5_2:-53509567 Msa0776050:CDS
CCTATGGCTGCCATGTTTGG+TGG 0.517240 5_2:-53512187 Msa0776050:CDS
TTTAAATCATTAGGATGCAA+TGG 0.518509 5_2:+53511390 None:intergenic
CTGAACCAGCGACGGGGAAG+CGG 0.519190 5_2:+53512338 None:intergenic
GAACTTAGGTGATGGAAGGT+TGG 0.522752 5_2:-53512269 Msa0776050:CDS
TCGCTAAGAAGAAATTCGCC+TGG 0.524799 5_2:+53512436 None:intergenic
CATTGACCACTGCTTGACTT+GGG 0.525222 5_2:-53510782 Msa0776050:CDS
GTTGGACTGTTTGGGACAGA+TGG 0.525287 5_2:-53509523 Msa0776050:CDS
AGCAGGGTTGTCATTGCTGA+TGG 0.525509 5_2:+53512708 None:intergenic
TCTATGTGACGACGGTATGA+AGG 0.525866 5_2:+53509320 None:intergenic
AGGGAAGCACTCAATGATCC+AGG 0.528850 5_2:-53512454 Msa0776050:CDS
TGGTATCCCTACCCCTGACT+GGG 0.529089 5_2:-53510263 Msa0776050:CDS
CTTCCCCGTCGCTGGTTCAG+AGG 0.532088 5_2:-53512335 Msa0776050:CDS
GACGCAATTATTCCAGTATG+TGG 0.534184 5_2:+53512730 None:intergenic
TTGCATTAGTATATTCACTT+GGG 0.538332 5_2:+53510695 None:intergenic
TTGGAATTGTGTAAAGAGTG+AGG 0.538490 5_2:+53517030 None:intergenic
TGTACAAAGCTTTGGATGGA+GGG 0.538756 5_2:-53509649 Msa0776050:CDS
CGGAAATAAATGGATACTTG+AGG 0.538825 5_2:+53509251 None:intergenic
GGCAGCTTGCTGTGTATGGT+AGG 0.539353 5_2:-53516390 Msa0776050:CDS
ATTGCATTAGTATATTCACT+TGG 0.541152 5_2:+53510694 None:intergenic
GCCAGTGGCCATAGCAGTTG+AGG 0.541357 5_2:+53509688 None:intergenic
ACCTGACTTTCAGCCAAAGA+AGG 0.541490 5_2:-53510194 Msa0776050:CDS
ATGGGAACTTAGGTGATGGA+AGG 0.543924 5_2:-53512273 Msa0776050:CDS
TGAAGGCCAAGTTTATTGCT+GGG 0.544977 5_2:-53509733 Msa0776050:CDS
AGCACCAAGTCCTCGCATCC+CGG 0.545712 5_2:+53516327 None:intergenic
ACCATATGGACGTGATAGCT+GGG 0.545943 5_2:-53509805 Msa0776050:CDS
TTCACCATCTCAAGAAACAT+TGG 0.546066 5_2:+53509028 None:intergenic
CGTTCTTGAATGCTTGGACA+AGG 0.549794 5_2:-53510629 Msa0776050:CDS
CAATATTCCAATCACGGAAG+AGG 0.549876 5_2:+53511151 None:intergenic
AACATACTTAAGTCTGGCCC+AGG 0.550964 5_2:+53510576 None:intergenic
TTAATGGGAGTTTCTTGTGG+AGG 0.551450 5_2:-53511237 Msa0776050:CDS
TGGAATTGTGTAAAGAGTGA+GGG 0.551716 5_2:+53517031 None:intergenic
AACGTACCGATAAGGAAGAA+AGG 0.551846 5_2:+53516953 None:intergenic
TGCCGGAACTGGCTCAGCCA+TGG 0.552669 5_2:+53509571 None:intergenic
AGCTTTCTCAAGACTGACTT+CGG 0.552709 5_2:+53512888 None:intergenic
CTCTTTCATACCATGAACTT+CGG 0.552721 5_2:+53512624 None:intergenic
GATCCGCCCAGCAATAAACT+TGG 0.553499 5_2:+53509727 None:intergenic
ATCTTCCTCTGAACCAGCGA+CGG 0.553654 5_2:+53512330 None:intergenic
AATGCTTATAGTATTTCTTG+TGG 0.555880 5_2:-53509440 Msa0776050:CDS
CTGTAACCTTGCACGATGAA+GGG 0.556726 5_2:-53514996 Msa0776050:CDS
ATTAATGGGAACTTAGGTGA+TGG 0.556937 5_2:-53512277 Msa0776050:CDS
TCCTACAATTCCACCAAACA+TGG 0.558580 5_2:+53512177 None:intergenic
CACCAAACATGGCAGCCATA+GGG 0.558852 5_2:+53512188 None:intergenic
TACAGTCCCTTCATCGTGCA+AGG 0.559502 5_2:+53514990 None:intergenic
GGATGGAGGGCACAAACTTG+AGG 0.559895 5_2:-53509636 Msa0776050:CDS
GATTGCAACCTCAACTGCTA+TGG 0.560816 5_2:-53509696 Msa0776050:CDS
ATCGGTGCTTGTTTCTCAGG+TGG 0.560877 5_2:+53510832 None:intergenic
TAACAGTAACAACTCAGGTT+CGG 0.560943 5_2:-53516572 Msa0776050:CDS
TTGTACAAAGCTTTGGATGG+AGG 0.561407 5_2:-53509650 Msa0776050:CDS
GAGTTGTACAAAGCTTTGGA+TGG 0.564658 5_2:-53509653 Msa0776050:CDS
GGAGCTTCTTGATTGGCTGA+AGG 0.564907 5_2:-53509474 Msa0776050:CDS
GATCCTCATCAATCTCCTGC+GGG 0.565030 5_2:+53516422 None:intergenic
ATGTTTGTCGCCTTGCCTGA+AGG 0.567163 5_2:+53509140 None:intergenic
CAATACTGCCCTAGCACCAA+AGG 0.568311 5_2:+53512213 None:intergenic
TTGTTAAGTTGGAGAGATTG+CGG 0.569445 5_2:-53510090 Msa0776050:CDS
ATATCAAATACCTGAAACAG+TGG 0.571836 5_2:+53512118 None:intergenic
ACGCTGGTGATGCTCAGGCA+CGG 0.571857 5_2:-53510666 Msa0776050:CDS
TCAACGCAAGATACTACAGC+AGG 0.572004 5_2:+53512691 None:intergenic
ATTCGTAGTGCCTTCAGGCA+AGG 0.577745 5_2:-53509150 Msa0776050:three_prime_UTR
CTGGAGATGACTTGGATCAG+AGG 0.578510 5_2:+53510324 None:intergenic
GAGTTTCTTGTGGAGGTCAA+GGG 0.579278 5_2:-53511230 Msa0776050:CDS
CTATGTGACGACGGTATGAA+GGG 0.583308 5_2:+53509321 None:intergenic
GGCGATAACAGTAACAGTAC+CGG 0.583723 5_2:-53516487 Msa0776050:CDS
AGGTTGTCAAAGCATGCTCT+GGG 0.583903 5_2:-53512150 Msa0776050:CDS
AAAAGACAATCCTACTCTCA+GGG 0.588461 5_2:-53509495 Msa0776050:CDS
AGGCAGTGCTAAGTTGGCAA+AGG 0.588629 5_2:+53509601 None:intergenic
AAGTCATCTCCAGTTTCTGA+TGG 0.589571 5_2:-53510314 Msa0776050:CDS
TCCTAGGCACAAAGAGCGGA+TGG 0.590716 5_2:-53509390 Msa0776050:CDS
AAAAGTTGTAGATTTAGCAA+GGG 0.591947 5_2:-53509363 Msa0776050:CDS
GAGAGACTTGAGTTTCAGGA+TGG 0.593512 5_2:-53512664 Msa0776050:CDS
AGAAAGGAATAGAATCTGAT+CGG 0.594954 5_2:+53516969 None:intergenic
TCGGTTAAGAAGGCGCGGAT+GGG 0.595970 5_2:-53516553 Msa0776050:CDS
CCTGGCCAATATTCCAATCA+CGG 0.596475 5_2:+53511145 None:intergenic
TGGTGGAATTGTAGGACAAG+AGG 0.596531 5_2:-53512170 Msa0776050:CDS
CGGTAATAAAGCGATAAAGA+GGG 0.598263 5_2:+53517066 None:intergenic
GCAGCTTGCTGTGTATGGTA+GGG 0.598555 5_2:-53516389 Msa0776050:CDS
CACACAGGCCAAACAACCAA+AGG 0.598610 5_2:-53512497 Msa0776050:CDS
TCGTCACATAGATGTTGTTG+TGG 0.599771 5_2:-53509309 Msa0776050:CDS
TTAGGATGCAATGGTTCTGT+CGG 0.600075 5_2:+53511399 None:intergenic
AACAGTAACAGTAACAACTC+AGG 0.601183 5_2:-53516577 Msa0776050:CDS
TTTGAGTTGAGACGCAACTT+CGG 0.601730 5_2:-53509094 Msa0776050:three_prime_UTR
AGCTAAATGCAATACCCAGA+TGG 0.602057 5_2:-53510896 Msa0776050:CDS
AGAGCTTCAATATTCAGTTG+AGG 0.602807 5_2:+53511081 None:intergenic
ATGCTAGATGCAGTAGAGGT+GGG 0.606083 5_2:+53512395 None:intergenic
TCAAGAAGCTCCCTGAGAGT+AGG 0.607687 5_2:+53509485 None:intergenic
AATGCTAGATGCAGTAGAGG+TGG 0.608189 5_2:+53512394 None:intergenic
TAGGGCAGTATTGAACCCTA+TGG 0.608225 5_2:-53512203 Msa0776050:CDS
TGTATGGTAGGGAGACTATG+AGG 0.608486 5_2:-53516378 Msa0776050:CDS
AGATGTTGTTGTGGCTTGTG+AGG 0.611793 5_2:-53509300 Msa0776050:CDS
GTTCTTGTTTCCGGGATGCG+AGG 0.612931 5_2:-53516337 Msa0776050:CDS
TCCTGAAGTTGACAAGCTGA+AGG 0.613866 5_2:-53509750 Msa0776050:CDS
CTCAGAAATGAACTTATCCA+GGG 0.613872 5_2:+53512366 None:intergenic
GGTATGAAAGAGTTGAATGA+CGG 0.614542 5_2:-53512613 Msa0776050:CDS
CCAAGAAAGAGAGTTAGCGA+AGG 0.614686 5_2:-53516640 Msa0776050:CDS
TGGAATGCTAGATGCAGTAG+AGG 0.618576 5_2:+53512391 None:intergenic
AGCAGCTGTTGCAGCAACTG+TGG 0.622684 5_2:+53511116 None:intergenic
AGATCCTCATCAATCTCCTG+CGG 0.623454 5_2:+53516421 None:intergenic
GTAATTGCGTGCTCTCATGT+TGG 0.625010 5_2:+53509778 None:intergenic
GACAAGAGTTTCAGTAGCGG+CGG 0.626725 5_2:-53516508 Msa0776050:CDS
TCAGAGGAGGAGAACTGCAG+TGG 0.627364 5_2:+53510340 None:intergenic
ACTAATGCAATGAAGAACGC+TGG 0.628383 5_2:-53510682 Msa0776050:CDS
TTGCGGTCAAATCTGCAACC+AGG 0.628501 5_2:-53510073 Msa0776050:CDS
CTCAAATATGAACTGTGAGA+CGG 0.633623 5_2:+53509111 None:intergenic
ATCGAGCCCAAGTCAAGCAG+TGG 0.639227 5_2:+53510776 None:intergenic
GAAGCCAATCCAGTTTGAGA+AGG 0.640400 5_2:-53510041 Msa0776050:intron
AAAAGGTGGTATTGTCACAC+AGG 0.640867 5_2:-53512512 Msa0776050:CDS
TATAAGCTAACTGCTTCACT+CGG 0.644091 5_2:+53510431 None:intergenic
AGGAGAACTGCAGTGGACGA+GGG 0.645043 5_2:+53510347 None:intergenic
CAGTACCGGGAATTTGATTG+CGG 0.646358 5_2:-53516473 Msa0776050:CDS
GCGATAACAGTAACAGTACC+GGG 0.648141 5_2:-53516486 Msa0776050:CDS
TTTCAGTTTCAGAGCTAACA+CGG 0.652120 5_2:+53511052 None:intergenic
TGTCAAGCTTAGTACAAGCA+CGG 0.654017 5_2:+53514867 None:intergenic
GGTAATAAAGCGATAAAGAG+GGG 0.654602 5_2:+53517067 None:intergenic
AGGCCCAAAATCACAAAACA+CGG 0.655204 5_2:+53512786 None:intergenic
GAGATGACTTGGATCAGAGG+AGG 0.659455 5_2:+53510327 None:intergenic
GGCTCAGCCATGGAAAAGAG+AGG 0.660682 5_2:+53509581 None:intergenic
CAACAACATCTATGTGACGA+CGG 0.662935 5_2:+53509312 None:intergenic
TGTGAATGCAAGACTATACG+TGG 0.663201 5_2:-53510971 Msa0776050:CDS
AATGAATGCACGGTACACAT+CGG 0.665103 5_2:+53510814 None:intergenic
CAGGTTCGGTTAAGAAGGCG+CGG 0.667374 5_2:-53516558 Msa0776050:CDS
CAATAGGAGGCTGATGACTG+TGG 0.671941 5_2:+53512845 None:intergenic
ACATCAACAACAGTAAACTC+AGG 0.672812 5_2:+53512766 None:intergenic
ATTGGATGAAAACAGCTCAA+CGG 0.674569 5_2:+53509231 None:intergenic
AAGCAGTGGTCAATGTTGTG+TGG 0.675358 5_2:+53510790 None:intergenic
TGTACAACTCCAGACAGACA+AGG 0.675587 5_2:+53509666 None:intergenic
TGTTTCCTAGGCACAAAGAG+CGG 0.681256 5_2:-53509394 Msa0776050:CDS
CTTCCTCTGAACCAGCGACG+GGG 0.682309 5_2:+53512332 None:intergenic
TAGGTGGGGAATGACCATCT+GGG 0.685278 5_2:+53510882 None:intergenic
CTCCAGACAGACAAGGCCAG+TGG 0.687437 5_2:+53509673 None:intergenic
CTTGGACAAGGAGAAGTGTG+AGG 0.693103 5_2:-53510617 Msa0776050:CDS
TAACCCGCAGGAGATTGATG+AGG 0.693992 5_2:-53516425 Msa0776050:CDS
GAACTTCGGAGAACACAACA+AGG 0.697668 5_2:+53512638 None:intergenic
AGGCCAAGTTTATTGCTGGG+CGG 0.703125 5_2:-53509730 Msa0776050:CDS
TGTTGTTGATGTTGACGGAG+AGG 0.708009 5_2:-53512755 Msa0776050:CDS
CAACGCAAGATACTACAGCA+GGG 0.714305 5_2:+53512692 None:intergenic
AGTGACAAGAGTTTCAGTAG+CGG 0.717098 5_2:-53516511 Msa0776050:CDS
GTTGTGTGGAAATGAATGCA+CGG 0.719285 5_2:+53510804 None:intergenic
TTGTTGGTTCTGGTGCACTG+GGG 0.742108 5_2:-53511284 Msa0776050:CDS
ATGGTAGGGAGACTATGAGG+AGG 0.751101 5_2:-53516375 Msa0776050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+AGG - chr5_2:53512328-53512347 Msa0776050:CDS 0.0%
!!! TCACTTTATTTTTATATAAT+TGG - chr5_2:53512936-53512955 Msa0776050:intron 10.0%
!! AAAACAAAACAAAATTAAGA+AGG + chr5_2:53509222-53509241 None:intergenic 15.0%
!!! TTTTCCTAATTAAAATAACA+AGG - chr5_2:53510127-53510146 Msa0776050:CDS 15.0%
!! TTTCCTAATTAAAATAACAA+GGG - chr5_2:53510128-53510147 Msa0776050:CDS 15.0%
!!! TATAAGTATTTATTAGTCTT+TGG - chr5_2:53510569-53510588 Msa0776050:intron 15.0%
!! AAAAGTAATAAGATATTCTA+AGG + chr5_2:53510688-53510707 None:intergenic 15.0%
!!! TTAGAATATCTTATTACTTT+TGG - chr5_2:53510687-53510706 Msa0776050:CDS 15.0%
!! AAAATGAAATAAGATTATTG+AGG - chr5_2:53511525-53511544 Msa0776050:intron 15.0%
!!! TATTTGAAATTATTGAATGA+AGG - chr5_2:53512079-53512098 Msa0776050:intron 15.0%
!! ATGTTTACATTATAAAATCA+TGG - chr5_2:53512184-53512203 Msa0776050:CDS 15.0%
!! ATATAACTAATCATAATAAG+AGG - chr5_2:53512210-53512229 Msa0776050:CDS 15.0%
!! TATAACTAATCATAATAAGA+GGG - chr5_2:53512211-53512230 Msa0776050:CDS 15.0%
!! CATAAGTAGTATATTAATAA+GGG + chr5_2:53512422-53512441 None:intergenic 15.0%
!!! CAAAACTTTTTTTTTTTTGA+AGG + chr5_2:53512711-53512730 None:intergenic 15.0%
!!! TCTTTTGTATAAATAATTCT+TGG - chr5_2:53514118-53514137 Msa0776050:intron 15.0%
!!! CTTTTGTATAAATAATTCTT+GGG - chr5_2:53514119-53514138 Msa0776050:intron 15.0%
!! AGAAAACTTATATCTTATAT+TGG - chr5_2:53514162-53514181 Msa0776050:intron 15.0%
!!! TTTATTGGTTTTAAATCATT+AGG + chr5_2:53514669-53514688 None:intergenic 15.0%
!! AATACAATTACAAAAAAGAA+AGG + chr5_2:53516085-53516104 None:intergenic 15.0%
!!! TTCTTTTTTGTAATTGTATT+TGG - chr5_2:53516085-53516104 Msa0776050:intron 15.0%
!!! TTTTTTTAAATGTGAAGAAG+TGG - chr5_2:53509959-53509978 Msa0776050:intron 20.0%
!!! TTACCCTTGTTATTTTAATT+AGG + chr5_2:53510134-53510153 None:intergenic 20.0%
!! ACACATTTATTAGTTGAAAA+GGG + chr5_2:53510292-53510311 None:intergenic 20.0%
!! AACACATTTATTAGTTGAAA+AGG + chr5_2:53510293-53510312 None:intergenic 20.0%
!!! GAAGTGTTTGATAAAATTAA+CGG - chr5_2:53510376-53510395 Msa0776050:CDS 20.0%
!!! TAGTGTTTTGTTTTAATAAC+CGG - chr5_2:53510484-53510503 Msa0776050:intron 20.0%
!!! AGTTTGTCATTTCAAAATTA+AGG + chr5_2:53511370-53511389 None:intergenic 20.0%
!!! ACATATGCTACATTATTTTA+TGG - chr5_2:53511440-53511459 Msa0776050:intron 20.0%
!!! TTTTAATCATTATAATAGCC+AGG + chr5_2:53511488-53511507 None:intergenic 20.0%
!! AAGTATGTTAGCAATATAAT+AGG + chr5_2:53511585-53511604 None:intergenic 20.0%
!! TAATAGGTGATTAATGTTTA+TGG - chr5_2:53512115-53512134 Msa0776050:intron 20.0%
!! ATAACTAATCATAATAAGAG+GGG - chr5_2:53512212-53512231 Msa0776050:CDS 20.0%
!!! TTTTTTTTAGGAATATAGTG+AGG - chr5_2:53512341-53512360 Msa0776050:CDS 20.0%
!! CCATAAGTAGTATATTAATA+AGG + chr5_2:53512423-53512442 None:intergenic 20.0%
!! CCTTATTAATATACTACTTA+TGG - chr5_2:53512420-53512439 Msa0776050:CDS 20.0%
!!! TAGAGTAATATTTTAGTTCT+TGG - chr5_2:53512533-53512552 Msa0776050:CDS 20.0%
!! TATGTCACAAACATATTTAA+AGG - chr5_2:53512601-53512620 Msa0776050:CDS 20.0%
!! AAACATATTTAAAGGAAGAA+TGG - chr5_2:53512609-53512628 Msa0776050:CDS 20.0%
!! ACATGTTATCTACATTATAT+TGG + chr5_2:53512674-53512693 None:intergenic 20.0%
!! AGTATATGTATGTAATGTTA+AGG - chr5_2:53512784-53512803 Msa0776050:CDS 20.0%
!! TTGATATGATATTAGATGTT+AGG - chr5_2:53512819-53512838 Msa0776050:CDS 20.0%
!!! TCAGTTTTAATAAAAGCAAT+AGG + chr5_2:53513221-53513240 None:intergenic 20.0%
!! TTTATTAAAACTGAAGTTAG+AGG - chr5_2:53513227-53513246 Msa0776050:intron 20.0%
!! ATGATATACTTGGATTAATA+TGG - chr5_2:53514412-53514431 Msa0776050:intron 20.0%
!! TATTATAATTAAAATCTCCG+GGG + chr5_2:53514528-53514547 None:intergenic 20.0%
!! GTATTATAATTAAAATCTCC+GGG + chr5_2:53514529-53514548 None:intergenic 20.0%
!! GGTATTATAATTAAAATCTC+CGG + chr5_2:53514530-53514549 None:intergenic 20.0%
!!! TTTAAAGAATTTTGCCTTAA+TGG - chr5_2:53514794-53514813 Msa0776050:intron 20.0%
!!! TTAAAGAATTTTGCCTTAAT+GGG - chr5_2:53514795-53514814 Msa0776050:intron 20.0%
!! TTATTTATGTTAATTCATGC+CGG - chr5_2:53515512-53515531 Msa0776050:intron 20.0%
!!! TTTTTTGTAATTGTATTTGG+TGG - chr5_2:53516088-53516107 Msa0776050:intron 20.0%
!! TACATACTTAGGATATAATT+GGG - chr5_2:53516137-53516156 Msa0776050:intron 20.0%
!! TTTCTAACTAAGATATGTTT+AGG + chr5_2:53516851-53516870 None:intergenic 20.0%
! TGAAAAACCTTAAGAAACAT+AGG + chr5_2:53509140-53509159 None:intergenic 25.0%
!!! TTTCATCGATTCGATTTTAT+AGG - chr5_2:53509161-53509180 Msa0776050:three_prime_UTR 25.0%
!!! TTCATCGATTCGATTTTATA+GGG - chr5_2:53509162-53509181 Msa0776050:three_prime_UTR 25.0%
!!! GTTTTTTTTGATAATCTCGA+TGG - chr5_2:53509237-53509256 Msa0776050:exon 25.0%
!!! TTTGTTGATTTGATAGATCT+AGG - chr5_2:53509796-53509815 Msa0776050:CDS 25.0%
! CACATTTATTAGTTGAAAAG+GGG + chr5_2:53510291-53510310 None:intergenic 25.0%
!!! TTGATTGATTTGATAGATCT+AGG - chr5_2:53510312-53510331 Msa0776050:CDS 25.0%
! CTAAAGTAAATACTTGTATC+AGG + chr5_2:53510467-53510486 None:intergenic 25.0%
!!! GTATTTATTAGTCTTTGGTT+TGG - chr5_2:53510574-53510593 Msa0776050:intron 25.0%
!! AAGTTTATAAATGAGAGCAT+GGG + chr5_2:53510629-53510648 None:intergenic 25.0%
! ACATTTACTTATAAGCTATC+CGG + chr5_2:53510654-53510673 None:intergenic 25.0%
!!! AGTTTTTTCAACATATGAAG+AGG - chr5_2:53510768-53510787 Msa0776050:CDS 25.0%
! GAAATTAGAAAGTTGTTCTT+TGG + chr5_2:53511216-53511235 None:intergenic 25.0%
!!! TTTTGCTCTCTACTTATTTT+TGG - chr5_2:53511249-53511268 Msa0776050:CDS 25.0%
! ATATGTAAACTATGTATCAG+AGG + chr5_2:53511426-53511445 None:intergenic 25.0%
!! TCTATTTGGTTTACATTTCT+TGG - chr5_2:53511608-53511627 Msa0776050:intron 25.0%
! CATACTATTATCTGTAAAGA+CGG - chr5_2:53511850-53511869 Msa0776050:intron 25.0%
! ATACTATTATCTGTAAAGAC+GGG - chr5_2:53511851-53511870 Msa0776050:intron 25.0%
! TGTGAAGTAATTATGTAGAA+TGG - chr5_2:53512034-53512053 Msa0776050:intron 25.0%
! GTGAAGTAATTATGTAGAAT+GGG - chr5_2:53512035-53512054 Msa0776050:intron 25.0%
! TAATTATGTAGAATGGGAAT+GGG - chr5_2:53512041-53512060 Msa0776050:intron 25.0%
! AAGTAGTATATTAATAAGGG+TGG + chr5_2:53512419-53512438 None:intergenic 25.0%
! TTCAACTTTATCTCATACTT+TGG - chr5_2:53512448-53512467 Msa0776050:CDS 25.0%
!! GTATGTAATGTTAAGGTTTT+TGG - chr5_2:53512791-53512810 Msa0776050:CDS 25.0%
! ATATGATATTAGATGTTAGG+TGG - chr5_2:53512822-53512841 Msa0776050:CDS 25.0%
! TATAATTGGTAGAAATGTGA+AGG - chr5_2:53512950-53512969 Msa0776050:intron 25.0%
! ATAATTGGTAGAAATGTGAA+GGG - chr5_2:53512951-53512970 Msa0776050:intron 25.0%
! AATTAATGAAATCATGTGAG+CGG - chr5_2:53512999-53513018 Msa0776050:intron 25.0%
! TCAAATAAGTCAGAAACAAA+TGG + chr5_2:53513090-53513109 None:intergenic 25.0%
! GTTTATTATAACTGTCTTGT+AGG - chr5_2:53513124-53513143 Msa0776050:intron 25.0%
!!! GTTTTAATAAAAGCAATAGG+AGG + chr5_2:53513218-53513237 None:intergenic 25.0%
!! CTAGCATTTTTAATCTTTCT+TGG + chr5_2:53513464-53513483 None:intergenic 25.0%
! TAAGTTCCCATTAATATTAC+TGG + chr5_2:53513765-53513784 None:intergenic 25.0%
! AGTAATATTAATGGGAACTT+AGG - chr5_2:53513764-53513783 Msa0776050:intron 25.0%
!!! TTCTTTTTGCTGTTTTGATT+GGG - chr5_2:53514062-53514081 Msa0776050:intron 25.0%
! ACCAAATTTCACTTATTATG+AGG + chr5_2:53514244-53514263 None:intergenic 25.0%
! TTGACTATCATTTGATTGTT+TGG - chr5_2:53514265-53514284 Msa0776050:intron 25.0%
! AACCATGGATATTATAAAAG+AGG + chr5_2:53514299-53514318 None:intergenic 25.0%
! AAACAGTTCAATGATATACT+TGG - chr5_2:53514402-53514421 Msa0776050:intron 25.0%
!! TGGATTAATATGGTTTTTAC+TGG - chr5_2:53514422-53514441 Msa0776050:intron 25.0%
! TATAAAAATACCTAGTCTGT+TGG - chr5_2:53514447-53514466 Msa0776050:intron 25.0%
! ATAATACCTTACATTTCTTC+TGG - chr5_2:53514542-53514561 Msa0776050:intron 25.0%
! TTTAAATCATTAGGATGCAA+TGG + chr5_2:53514660-53514679 None:intergenic 25.0%
! TTGCATTAGTATATTCACTT+GGG + chr5_2:53515355-53515374 None:intergenic 25.0%
! ATTGCATTAGTATATTCACT+TGG + chr5_2:53515356-53515375 None:intergenic 25.0%
!!! TTTTGAAGATTGTATTACCT+GGG - chr5_2:53515454-53515473 Msa0776050:intron 25.0%
! TGATGATCTAATTGTTAAGT+TGG - chr5_2:53515946-53515965 Msa0776050:intron 25.0%
! AAAAATATACCTTCTCAAAC+TGG + chr5_2:53516018-53516037 None:intergenic 25.0%
! GTACATACTTAGGATATAAT+TGG - chr5_2:53516136-53516155 Msa0776050:intron 25.0%
! AATGCTTATAGTATTTCTTG+TGG - chr5_2:53516607-53516626 Msa0776050:CDS 25.0%
! AAAAAGTTGTAGATTTAGCA+AGG - chr5_2:53516683-53516702 Msa0776050:intron 25.0%
! AAAAGTTGTAGATTTAGCAA+GGG - chr5_2:53516684-53516703 Msa0776050:intron 25.0%
!!! GAATTCTTTTTGGTTCAGTT+TGG + chr5_2:53509039-53509058 None:intergenic 30.0%
!! AGAACGTTTGGAATTCTTTT+TGG + chr5_2:53509049-53509068 None:intergenic 30.0%
AGAAAGGAATAGAATCTGAT+CGG + chr5_2:53509081-53509100 None:intergenic 30.0%
TCTATTCCTTTCTTCCTTAT+CGG - chr5_2:53509088-53509107 Msa0776050:three_prime_UTR 30.0%
TCTTCTTCCTATGTTTCTTA+AGG - chr5_2:53509130-53509149 Msa0776050:three_prime_UTR 30.0%
GTTAGCTGATTGAATTTGTA+TGG - chr5_2:53509878-53509897 Msa0776050:intron 30.0%
!! TTTTTGGTCAAGTAGCTTAA+TGG - chr5_2:53509922-53509941 Msa0776050:intron 30.0%
!! TGATAGATCTAGGCTTTATT+TGG - chr5_2:53510322-53510341 Msa0776050:CDS 30.0%
AGAAATAGCAGATAGTTGAT+AGG - chr5_2:53510347-53510366 Msa0776050:CDS 30.0%
!!! TTGTTTTAATAACCGGCATT+TGG - chr5_2:53510491-53510510 Msa0776050:intron 30.0%
GAAGTTTATAAATGAGAGCA+TGG + chr5_2:53510630-53510649 None:intergenic 30.0%
CTCTCATTTATAAACTTCTC+CGG - chr5_2:53510632-53510651 Msa0776050:CDS 30.0%
! TACTTTTGGACAAGTTTTCA+TGG - chr5_2:53510701-53510720 Msa0776050:CDS 30.0%
! ACTTTTGGACAAGTTTTCAT+GGG - chr5_2:53510702-53510721 Msa0776050:CDS 30.0%
AAAAAGCTAAAAGCAATCCA+AGG + chr5_2:53510844-53510863 None:intergenic 30.0%
TCAACAAATGAAGAAGCAAT+AGG - chr5_2:53510881-53510900 Msa0776050:CDS 30.0%
CAACAAATGAAGAAGCAATA+GGG - chr5_2:53510882-53510901 Msa0776050:CDS 30.0%
ATTAGAAAAAGCTGACATGT+TGG + chr5_2:53510973-53510992 None:intergenic 30.0%
AAAACGATCTTGGTAAAAAC+AGG - chr5_2:53511117-53511136 Msa0776050:CDS 30.0%
AAACGATCTTGGTAAAAACA+GGG - chr5_2:53511118-53511137 Msa0776050:CDS 30.0%
AGAACAACTTTCTAATTTCC+AGG - chr5_2:53511217-53511236 Msa0776050:CDS 30.0%
ACAATCACTCACTTGATATA+TGG + chr5_2:53511311-53511330 None:intergenic 30.0%
TCAAAATTAAGGTGTGGATA+AGG + chr5_2:53511359-53511378 None:intergenic 30.0%
GTCATTTCAAAATTAAGGTG+TGG + chr5_2:53511365-53511384 None:intergenic 30.0%
AGCATATCAACTATATAACC+TGG - chr5_2:53511467-53511486 Msa0776050:intron 30.0%
AGGATGTGAAGATGAAATAA+AGG + chr5_2:53511565-53511584 None:intergenic 30.0%
CTAACATACTTCTCTCTATT+TGG - chr5_2:53511594-53511613 Msa0776050:intron 30.0%
TGCTAGTTATATAACAGTAC+AGG - chr5_2:53511773-53511792 Msa0776050:intron 30.0%
TGGAAGTCTAAATACACATT+GGG + chr5_2:53511880-53511899 None:intergenic 30.0%
ATGGAAGTCTAAATACACAT+TGG + chr5_2:53511881-53511900 None:intergenic 30.0%
ATATGAACCTGTATTTCGTT+TGG - chr5_2:53511967-53511986 Msa0776050:intron 30.0%
TCTATTTCCAAACGAAATAC+AGG + chr5_2:53511977-53511996 None:intergenic 30.0%
TGTATTTCGTTTGGAAATAG+AGG - chr5_2:53511976-53511995 Msa0776050:intron 30.0%
GTAATTATGTAGAATGGGAA+TGG - chr5_2:53512040-53512059 Msa0776050:intron 30.0%
GTTTATGGAAGTCATTATTG+TGG - chr5_2:53512130-53512149 Msa0776050:CDS 30.0%
AAGTGAGTCATAATAAGATG+AGG - chr5_2:53512246-53512265 Msa0776050:CDS 30.0%
AGTGAGTCATAATAAGATGA+GGG - chr5_2:53512247-53512266 Msa0776050:CDS 30.0%
CACTCTGTTATTACTAATCA+TGG - chr5_2:53512295-53512314 Msa0776050:CDS 30.0%
AATGCCAACAATAACATGAT+TGG - chr5_2:53512849-53512868 Msa0776050:CDS 30.0%
GTTTCCAATCATGTTATTGT+TGG + chr5_2:53512856-53512875 None:intergenic 30.0%
GAATTATTGTGTGTGATAGA+CGG + chr5_2:53512910-53512929 None:intergenic 30.0%
ATCACACACAATAATTCTGA+TGG - chr5_2:53512913-53512932 Msa0776050:intron 30.0%
! AAGGACAAGTTTTACTGAAA+TGG + chr5_2:53513046-53513065 None:intergenic 30.0%
TTTACTGTTGTTGATGTTGA+CGG - chr5_2:53513287-53513306 Msa0776050:intron 30.0%
AACTATGGTGCATATGAAAA+AGG - chr5_2:53513518-53513537 Msa0776050:intron 30.0%
! TTTTGAACTTCAAACCTCTA+AGG - chr5_2:53513573-53513592 Msa0776050:intron 30.0%
TTTGAACTTCAAACCTCTAA+GGG - chr5_2:53513574-53513593 Msa0776050:intron 30.0%
!! GATAAGTTCATTTCTGAGAT+AGG - chr5_2:53513686-53513705 Msa0776050:intron 30.0%
TCTATCGCCAGTAATATTAA+TGG - chr5_2:53513755-53513774 Msa0776050:intron 30.0%
CTATCGCCAGTAATATTAAT+GGG - chr5_2:53513756-53513775 Msa0776050:intron 30.0%
ATATCAAATACCTGAAACAG+TGG + chr5_2:53513932-53513951 None:intergenic 30.0%
TATGGCAAAATACTTCCATA+TGG + chr5_2:53514017-53514036 None:intergenic 30.0%
!!! GTTCTTTTTGCTGTTTTGAT+TGG - chr5_2:53514061-53514080 Msa0776050:intron 30.0%
!! GCTTTTCAATATTTTGAGCA+AGG - chr5_2:53514199-53514218 Msa0776050:intron 30.0%
GCCTCATAATAAGTGAAATT+TGG - chr5_2:53514240-53514259 Msa0776050:intron 30.0%
TCATTTGATTGTTTGGATTC+TGG - chr5_2:53514272-53514291 Msa0776050:intron 30.0%
! GACCTCTTTTATAATATCCA+TGG - chr5_2:53514294-53514313 Msa0776050:intron 30.0%
! ATGCTCAGATTTCAGTTTTT+GGG - chr5_2:53514700-53514719 Msa0776050:intron 30.0%
! ATGTGTTTCATGATACCTTT+TGG - chr5_2:53515018-53515037 Msa0776050:CDS 30.0%
! TGTGTTTCATGATACCTTTT+GGG - chr5_2:53515019-53515038 Msa0776050:CDS 30.0%
ATTAGTATATTCACTTGGGT+TGG + chr5_2:53515351-53515370 None:intergenic 30.0%
!! CTTTTGAAGATTGTATTACC+TGG - chr5_2:53515453-53515472 Msa0776050:intron 30.0%
CAGGTAAAACTAATATACAC+CGG + chr5_2:53515534-53515553 None:intergenic 30.0%
!!! ACTATTTTTGCATCCTTCTT+TGG + chr5_2:53515869-53515888 None:intergenic 30.0%
AAAAATAGTGACAGATGAGA+AGG - chr5_2:53515880-53515899 Msa0776050:intron 30.0%
! GTGGTTTCAATAAGCAATTT+TGG - chr5_2:53516107-53516126 Msa0776050:intron 30.0%
TTGGAAGTTTGTACATACTT+AGG - chr5_2:53516126-53516145 Msa0776050:intron 30.0%
AGTTTCTACCTAAAAATTGC+AGG - chr5_2:53516204-53516223 Msa0776050:intron 30.0%
! ATCATCATCCTGCAATTTTT+AGG + chr5_2:53516215-53516234 None:intergenic 30.0%
TGATGATACAAACTACCATA+TGG - chr5_2:53516228-53516247 Msa0776050:intron 30.0%
! TTTTCAATAGCATGTTTCCT+AGG - chr5_2:53516641-53516660 Msa0776050:CDS 30.0%
GGAAATAAATGGATACTTGA+GGG + chr5_2:53516798-53516817 None:intergenic 30.0%
TTAACCAATGTTTCTTGAGA+TGG - chr5_2:53517015-53517034 Msa0776050:five_prime_UTR 30.0%
TCGGTAATAAAGCGATAAAG+AGG + chr5_2:53508985-53509004 None:intergenic 35.0%
TGGAATTGTGTAAAGAGTGA+GGG + chr5_2:53509019-53509038 None:intergenic 35.0%
TTGGAATTGTGTAAAGAGTG+AGG + chr5_2:53509020-53509039 None:intergenic 35.0%
TAGGAAGAAGAAGATGAATC+TGG + chr5_2:53509121-53509140 None:intergenic 35.0%
! TTACTGTTGCTGTTGTTGAT+CGG + chr5_2:53509452-53509471 None:intergenic 35.0%
AACAGTAACAGTAACAACTC+AGG - chr5_2:53509470-53509489 Msa0776050:CDS 35.0%
TAACAGTAACAACTCAGGTT+CGG - chr5_2:53509475-53509494 Msa0776050:CDS 35.0%
TATTGCATGATATATGCAGG+TGG + chr5_2:53510008-53510027 None:intergenic 35.0%
GGATATTGCATGATATATGC+AGG + chr5_2:53510011-53510030 None:intergenic 35.0%
TAAGCTATGAGCTACTTGTT+TGG - chr5_2:53510184-53510203 Msa0776050:CDS 35.0%
CAAAAAACGTCATAGTCTCA+CGG + chr5_2:53510210-53510229 None:intergenic 35.0%
! TTGCTTCAGTGTTCTTGTTT+AGG - chr5_2:53510227-53510246 Msa0776050:CDS 35.0%
! TGCTTCAGTGTTCTTGTTTA+GGG - chr5_2:53510228-53510247 Msa0776050:CDS 35.0%
!! TAGCAGATAGTTGATAGGTT+AGG - chr5_2:53510352-53510371 Msa0776050:CDS 35.0%
TAAGTTCATGTTCCAAATGC+CGG + chr5_2:53510506-53510525 None:intergenic 35.0%
! CTTTTGGACAAGTTTTCATG+GGG - chr5_2:53510703-53510722 Msa0776050:CDS 35.0%
TCAACATATGAAGAGGCAAT+AGG - chr5_2:53510775-53510794 Msa0776050:CDS 35.0%
CAACATATGAAGAGGCAATA+GGG - chr5_2:53510776-53510795 Msa0776050:CDS 35.0%
GCAAAGAATCTTATTCTTGC+TGG - chr5_2:53511020-53511039 Msa0776050:CDS 35.0%
! GTGTTTTCAGAAAACGATCT+TGG - chr5_2:53511107-53511126 Msa0776050:CDS 35.0%
ATCAAGTGAGTGATTGTGTA+TGG - chr5_2:53511314-53511333 Msa0776050:CDS 35.0%
GTGATTGTGTATGGAATTGT+AGG - chr5_2:53511323-53511342 Msa0776050:CDS 35.0%
!! TTCCATTGAACTTTGAGATG+AGG - chr5_2:53511895-53511914 Msa0776050:intron 35.0%
AGGCGATTCATTTGCATAAT+AGG - chr5_2:53512099-53512118 Msa0776050:intron 35.0%
TATGGAAGTCATTATTGTGG+TGG - chr5_2:53512133-53512152 Msa0776050:CDS 35.0%
ACTAATCATAATAAGAGGGG+AGG - chr5_2:53512215-53512234 Msa0776050:CDS 35.0%
GTGAGTCATAATAAGATGAG+GGG - chr5_2:53512248-53512267 Msa0776050:CDS 35.0%
AGCAAGTAGTGAAAAGCTAT+TGG + chr5_2:53512385-53512404 None:intergenic 35.0%
TTCCGTATGATATGTGACAA+GGG + chr5_2:53512483-53512502 None:intergenic 35.0%
TTTCCGTATGATATGTGACA+AGG + chr5_2:53512484-53512503 None:intergenic 35.0%
AGACGGTCTACAACAATATA+AGG + chr5_2:53512893-53512912 None:intergenic 35.0%
GCACTATACAACTACAAAGA+AGG + chr5_2:53513065-53513084 None:intergenic 35.0%
! ACTGAAGTTAGAGGTCTTTT+TGG - chr5_2:53513236-53513255 Msa0776050:intron 35.0%
! GTTCCGTGTTTTGTGATTTT+GGG - chr5_2:53513258-53513277 Msa0776050:intron 35.0%
ACATCAACAACAGTAAACTC+AGG + chr5_2:53513284-53513303 None:intergenic 35.0%
CTCTTTCATACCATGAACTT+CGG + chr5_2:53513426-53513445 None:intergenic 35.0%
GGTATGAAAGAGTTGAATGA+CGG - chr5_2:53513434-53513453 Msa0776050:intron 35.0%
TTCATATGCACCATAGTTTG+TGG + chr5_2:53513516-53513535 None:intergenic 35.0%
TATGGTGCATATGAAAAAGG+TGG - chr5_2:53513521-53513540 Msa0776050:intron 35.0%
GTTCAAAACCTTTGGTTGTT+TGG + chr5_2:53513561-53513580 None:intergenic 35.0%
! GGTTTGAAGTTCAAAACCTT+TGG + chr5_2:53513569-53513588 None:intergenic 35.0%
CTCAGAAATGAACTTATCCA+GGG + chr5_2:53513684-53513703 None:intergenic 35.0%
TCTCAGAAATGAACTTATCC+AGG + chr5_2:53513685-53513704 None:intergenic 35.0%
ATTAATGGGAACTTAGGTGA+TGG - chr5_2:53513770-53513789 Msa0776050:intron 35.0%
GAAATTTCATCCACTGTTTC+AGG - chr5_2:53513919-53513938 Msa0776050:intron 35.0%
TTGCCATAAAATTTCTCCCA+AGG - chr5_2:53514029-53514048 Msa0776050:intron 35.0%
TGCCATAAAATTTCTCCCAA+GGG - chr5_2:53514030-53514049 Msa0776050:intron 35.0%
! ATCCCTTGGGAGAAATTTTA+TGG + chr5_2:53514035-53514054 None:intergenic 35.0%
!! AATATTTTGAGCAAGGCACT+TGG - chr5_2:53514206-53514225 Msa0776050:intron 35.0%
AAGAACATGCAATACAACCA+TGG + chr5_2:53514314-53514333 None:intergenic 35.0%
ATGATATTCACCAACAGACT+AGG + chr5_2:53514460-53514479 None:intergenic 35.0%
ATAATTAAAATCTCCGGGGA+GGG + chr5_2:53514524-53514543 None:intergenic 35.0%
TATAATTAAAATCTCCGGGG+AGG + chr5_2:53514525-53514544 None:intergenic 35.0%
CTTTGACCAGAAGAAATGTA+AGG + chr5_2:53514551-53514570 None:intergenic 35.0%
TCTGGTCAAAGTTGTATTTG+TGG - chr5_2:53514560-53514579 Msa0776050:intron 35.0%
GCATCGTAACGACTATTTAT+TGG + chr5_2:53514684-53514703 None:intergenic 35.0%
! GATGCTCAGATTTCAGTTTT+TGG - chr5_2:53514699-53514718 Msa0776050:intron 35.0%
!! GATGCTAAAGTGTTTGTTGT+TGG - chr5_2:53514747-53514766 Msa0776050:intron 35.0%
!! AAAGTGTTTGTTGTTGGTTC+TGG - chr5_2:53514753-53514772 Msa0776050:intron 35.0%
TAGAGAAGAGTAACTTAAGC+AGG - chr5_2:53514868-53514887 Msa0776050:CDS 35.0%
GAGCTTCAATATTCAGTTGA+GGG + chr5_2:53514968-53514987 None:intergenic 35.0%
AGAGCTTCAATATTCAGTTG+AGG + chr5_2:53514969-53514988 None:intergenic 35.0%
TTTCAGTTTCAGAGCTAACA+CGG + chr5_2:53514998-53515017 None:intergenic 35.0%
! AACACTCAAGTTTTCCCAAA+AGG + chr5_2:53515036-53515055 None:intergenic 35.0%
! ACCATAGTTTTCTGTTAGGT+GGG + chr5_2:53515183-53515202 None:intergenic 35.0%
AAGTATGCATTTACTTCAGC+TGG + chr5_2:53515326-53515345 None:intergenic 35.0%
CAAGCAAACATACTTAAGTC+TGG + chr5_2:53515480-53515499 None:intergenic 35.0%
TAAAAACCATGCTTGAGTGT+AGG + chr5_2:53515568-53515587 None:intergenic 35.0%
! CAAGCATGGTTTTTATTCAC+AGG - chr5_2:53515573-53515592 Msa0776050:intron 35.0%
TATAAGCTAACTGCTTCACT+CGG + chr5_2:53515619-53515638 None:intergenic 35.0%
!! GTTAGCTTATACTTTTCCTG+AGG - chr5_2:53515628-53515647 Msa0776050:intron 35.0%
!! TTGTTAAGTTGGAGAGATTG+CGG - chr5_2:53515957-53515976 Msa0776050:intron 35.0%
TATACCTTCTCAAACTGGAT+TGG + chr5_2:53516013-53516032 None:intergenic 35.0%
AGAATATTCACCATGTTGCT+TGG - chr5_2:53516053-53516072 Msa0776050:intron 35.0%
TCAAGCATCAAGATTTGAGT+TGG - chr5_2:53516506-53516525 Msa0776050:CDS 35.0%
!! AAGATTTGAGTTGGACTGTT+TGG - chr5_2:53516515-53516534 Msa0776050:CDS 35.0%
!! AGATTTGAGTTGGACTGTTT+GGG - chr5_2:53516516-53516535 Msa0776050:CDS 35.0%
TAAAAGACAATCCTACTCTC+AGG - chr5_2:53516551-53516570 Msa0776050:CDS 35.0%
AAAAGACAATCCTACTCTCA+GGG - chr5_2:53516552-53516571 Msa0776050:CDS 35.0%
GAAACATGCTATTGAAAAGC+AGG + chr5_2:53516639-53516658 None:intergenic 35.0%
CGGAAATAAATGGATACTTG+AGG + chr5_2:53516799-53516818 None:intergenic 35.0%
AACAGCTCAACGGAAATAAA+TGG + chr5_2:53516809-53516828 None:intergenic 35.0%
ATTGGATGAAAACAGCTCAA+CGG + chr5_2:53516819-53516838 None:intergenic 35.0%
! ATGTTTAGGACACAACTGAT+TGG + chr5_2:53516837-53516856 None:intergenic 35.0%
CTCAAATATGAACTGTGAGA+CGG + chr5_2:53516939-53516958 None:intergenic 35.0%
TTCACCATCTCAAGAAACAT+TGG + chr5_2:53517022-53517041 None:intergenic 35.0%
!! AGTGAGGGTTTGGTTTGATT+CGG + chr5_2:53509004-53509023 None:intergenic 40.0%
TTGTGTAAAGAGTGAGGGTT+TGG + chr5_2:53509014-53509033 None:intergenic 40.0%
! AACGTACCGATAAGGAAGAA+AGG + chr5_2:53509097-53509116 None:intergenic 40.0%
! AATCTGGAAACGTACCGATA+AGG + chr5_2:53509105-53509124 None:intergenic 40.0%
AGTGACAAGAGTTTCAGTAG+CGG - chr5_2:53509536-53509555 Msa0776050:CDS 40.0%
!! TTTTGGAAATTCTAACCCGC+AGG - chr5_2:53509610-53509629 Msa0776050:CDS 40.0%
GCTAACTACTTATCAGCTCT+CGG + chr5_2:53509864-53509883 None:intergenic 40.0%
ATGTGAAGAAGTGGAATGTC+CGG - chr5_2:53509968-53509987 Msa0776050:intron 40.0%
ATGATATATGCAGGTGGAAG+AGG + chr5_2:53510002-53510021 None:intergenic 40.0%
TGAGCTTAGCTCAATTGGTA+GGG + chr5_2:53510032-53510051 None:intergenic 40.0%
TACCAATTGAGCTAAGCTCA+CGG - chr5_2:53510032-53510051 Msa0776050:intron 40.0%
! GCTTCAGTGTTCTTGTTTAG+GGG - chr5_2:53510229-53510248 Msa0776050:CDS 40.0%
! TGTTCTTGTTTAGGGGATGT+GGG - chr5_2:53510236-53510255 Msa0776050:CDS 40.0%
! GTCATCCTTTTCTAATGCCT+TGG - chr5_2:53510824-53510843 Msa0776050:CDS 40.0%
! GCAATCCAAGGCATTAGAAA+AGG + chr5_2:53510832-53510851 None:intergenic 40.0%
!! GTCAGCTTTTTCTAATGCCT+TGG - chr5_2:53510977-53510996 Msa0776050:CDS 40.0%
ATGAAGGGACTGTAGAGTTA+TGG - chr5_2:53511066-53511085 Msa0776050:CDS 40.0%
TGAAGGGACTGTAGAGTTAT+GGG - chr5_2:53511067-53511086 Msa0776050:CDS 40.0%
TGTCAAGCTTAGTACAAGCA+CGG + chr5_2:53511183-53511202 None:intergenic 40.0%
AATGAGAGCTGAATCTGTAC+AGG - chr5_2:53511715-53511734 Msa0776050:intron 40.0%
ATGAGAGCTGAATCTGTACA+GGG - chr5_2:53511716-53511735 Msa0776050:intron 40.0%
GTGGGTACAACACATATACT+TGG - chr5_2:53511738-53511757 Msa0776050:intron 40.0%
CACCTCATCTCAAAGTTCAA+TGG + chr5_2:53511900-53511919 None:intergenic 40.0%
! AACTTGCAGTGTTCTAGTTG+TGG + chr5_2:53512014-53512033 None:intergenic 40.0%
AAGTCATTATTGTGGTGGCT+AGG - chr5_2:53512138-53512157 Msa0776050:CDS 40.0%
AGTCATTATTGTGGTGGCTA+GGG - chr5_2:53512139-53512158 Msa0776050:CDS 40.0%
!! GAGGGGCATATTATTTTACG+AGG - chr5_2:53512265-53512284 Msa0776050:CDS 40.0%
CTCCCTTGTCACATATCATA+CGG - chr5_2:53512478-53512497 Msa0776050:CDS 40.0%
! AGCTTTCTCAAGACTGACTT+CGG + chr5_2:53513162-53513181 None:intergenic 40.0%
! GGTTCCGTGTTTTGTGATTT+TGG - chr5_2:53513257-53513276 Msa0776050:intron 40.0%
AGGCCCAAAATCACAAAACA+CGG + chr5_2:53513264-53513283 None:intergenic 40.0%
GACGCAATTATTCCAGTATG+TGG + chr5_2:53513320-53513339 None:intergenic 40.0%
TGATGAGAGACTTGAGTTTC+AGG - chr5_2:53513379-53513398 Msa0776050:intron 40.0%
GAAGAAGACACCACAAACTA+TGG - chr5_2:53513503-53513522 Msa0776050:intron 40.0%
AAAAGGTGGTATTGTCACAC+AGG - chr5_2:53513535-53513554 Msa0776050:intron 40.0%
GCAAATTGCTGTAGAAGCTT+GGG + chr5_2:53513815-53513834 None:intergenic 40.0%
CTTCTACAGCAATTTGCCTT+TGG - chr5_2:53513818-53513837 Msa0776050:intron 40.0%
TCCTACAATTCCACCAAACA+TGG + chr5_2:53513873-53513892 None:intergenic 40.0%
GCAAATGACGTTAGTCCATA+TGG - chr5_2:53513999-53514018 Msa0776050:intron 40.0%
AAAGAACACGCAAATCCCTT+GGG + chr5_2:53514048-53514067 None:intergenic 40.0%
AAAAGAACACGCAAATCCCT+TGG + chr5_2:53514049-53514068 None:intergenic 40.0%
TTAGACAGGGATTGTTGTAC+AGG + chr5_2:53514344-53514363 None:intergenic 40.0%
GTACAACAATCCCTGTCTAA+CGG - chr5_2:53514344-53514363 Msa0776050:intron 40.0%
TATGACAATGCCTCAAGGTA+TGG + chr5_2:53514374-53514393 None:intergenic 40.0%
ACTCTTATGACAATGCCTCA+AGG + chr5_2:53514379-53514398 None:intergenic 40.0%
TAATTAAAATCTCCGGGGAG+GGG + chr5_2:53514523-53514542 None:intergenic 40.0%
! GTTTTTCTACTTCGACTCTG+TGG - chr5_2:53514617-53514636 Msa0776050:intron 40.0%
! TTAGGATGCAATGGTTCTGT+CGG + chr5_2:53514651-53514670 None:intergenic 40.0%
TCCACAAGAAACTCCCATTA+AGG + chr5_2:53514811-53514830 None:intergenic 40.0%
TTAATGGGAGTTTCTTGTGG+AGG - chr5_2:53514810-53514829 Msa0776050:intron 40.0%
CAATATTCCAATCACGGAAG+AGG + chr5_2:53514899-53514918 None:intergenic 40.0%
CTCTTCCGTGATTGGAATAT+TGG - chr5_2:53514897-53514916 Msa0776050:CDS 40.0%
TGTGAATGCAAGACTATACG+TGG - chr5_2:53515076-53515095 Msa0776050:intron 40.0%
! GAAGTGGTTTCTGGAAATAC+AGG + chr5_2:53515112-53515131 None:intergenic 40.0%
CAGATTCAAGAAGTGGTTTC+TGG + chr5_2:53515121-53515140 None:intergenic 40.0%
CAGAAACCACTTCTTGAATC+TGG - chr5_2:53515119-53515138 Msa0776050:intron 40.0%
AGAGTTCCAGATTCAAGAAG+TGG + chr5_2:53515128-53515147 None:intergenic 40.0%
! CTTCTTGAATCTGGAACTCT+TGG - chr5_2:53515128-53515147 Msa0776050:intron 40.0%
AGCTAAATGCAATACCCAGA+TGG - chr5_2:53515151-53515170 Msa0776050:intron 40.0%
! CCATAGTTTTCTGTTAGGTG+GGG + chr5_2:53515182-53515201 None:intergenic 40.0%
! CACCATAGTTTTCTGTTAGG+TGG + chr5_2:53515184-53515203 None:intergenic 40.0%
! AGGCACCATAGTTTTCTGTT+AGG + chr5_2:53515187-53515206 None:intergenic 40.0%
AATGAATGCACGGTACACAT+CGG + chr5_2:53515236-53515255 None:intergenic 40.0%
GTTGTGTGGAAATGAATGCA+CGG + chr5_2:53515246-53515265 None:intergenic 40.0%
ACTAATGCAATGAAGAACGC+TGG - chr5_2:53515365-53515384 Msa0776050:intron 40.0%
AGTGTAGGACATACAGATAC+AGG + chr5_2:53515553-53515572 None:intergenic 40.0%
ATCAGAAACTGGAGATGACT+TGG + chr5_2:53515734-53515753 None:intergenic 40.0%
AAGTCATCTCCAGTTTCTGA+TGG - chr5_2:53515733-53515752 Msa0776050:intron 40.0%
ATACTACGCGCAGAAACATT+TGG - chr5_2:53515764-53515783 Msa0776050:intron 40.0%
GGTGAAAAACCCTATGAAGT+TGG - chr5_2:53515805-53515824 Msa0776050:intron 40.0%
CAACTTCTGCCAACTTCATA+GGG + chr5_2:53515817-53515836 None:intergenic 40.0%
ACAACTTCTGCCAACTTCAT+AGG + chr5_2:53515818-53515837 None:intergenic 40.0%
TGAAGGCCAAGTTTATTGCT+GGG - chr5_2:53516314-53516333 Msa0776050:intron 40.0%
! TCTGGAGTTGTACAAAGCTT+TGG - chr5_2:53516390-53516409 Msa0776050:CDS 40.0%
!! GAGTTGTACAAAGCTTTGGA+TGG - chr5_2:53516394-53516413 Msa0776050:CDS 40.0%
!! TTGTACAAAGCTTTGGATGG+AGG - chr5_2:53516397-53516416 Msa0776050:CDS 40.0%
!! TGTACAAAGCTTTGGATGGA+GGG - chr5_2:53516398-53516417 Msa0776050:CDS 40.0%
!! CTAAGTTGGCAAAGGTGTTT+CGG + chr5_2:53516441-53516460 None:intergenic 40.0%
! CTTGATTGGCTGAAGGAAAA+AGG - chr5_2:53516580-53516599 Msa0776050:CDS 40.0%
GTATGAAGGGATTTCCATCT+TGG + chr5_2:53516716-53516735 None:intergenic 40.0%
CAACAACATCTATGTGACGA+CGG + chr5_2:53516738-53516757 None:intergenic 40.0%
TCGTCACATAGATGTTGTTG+TGG - chr5_2:53516738-53516757 Msa0776050:intron 40.0%
!! TTTGAGTTGAGACGCAACTT+CGG - chr5_2:53516953-53516972 Msa0776050:intron 40.0%
CCTTCGCTAACTCTCTTTCT+TGG + chr5_2:53509410-53509429 None:intergenic 45.0%
CCAAGAAAGAGAGTTAGCGA+AGG - chr5_2:53509407-53509426 Msa0776050:CDS 45.0%
! CAACTCAGGTTCGGTTAAGA+AGG - chr5_2:53509484-53509503 Msa0776050:CDS 45.0%
GGCGATAACAGTAACAGTAC+CGG - chr5_2:53509560-53509579 Msa0776050:CDS 45.0%
GCGATAACAGTAACAGTACC+GGG - chr5_2:53509561-53509580 Msa0776050:CDS 45.0%
! CAGTACCGGGAATTTGATTG+CGG - chr5_2:53509574-53509593 Msa0776050:CDS 45.0%
AGATCCTCATCAATCTCCTG+CGG + chr5_2:53509629-53509648 None:intergenic 45.0%
TTGATGAGGATCTGCATAGC+AGG - chr5_2:53509636-53509655 Msa0776050:CDS 45.0%
TGTATGGTAGGGAGACTATG+AGG - chr5_2:53509669-53509688 Msa0776050:CDS 45.0%
TGGTCAAGTAGCTTAATGGC+TGG - chr5_2:53509926-53509945 Msa0776050:intron 45.0%
TGTGAAGAAGTGGAATGTCC+GGG - chr5_2:53509969-53509988 Msa0776050:intron 45.0%
GTGAGCTTAGCTCAATTGGT+AGG + chr5_2:53510033-53510052 None:intergenic 45.0%
ACCAATTGAGCTAAGCTCAC+GGG - chr5_2:53510033-53510052 Msa0776050:intron 45.0%
! GTGTTCTTGTTTAGGGGATG+TGG - chr5_2:53510235-53510254 Msa0776050:CDS 45.0%
! GTTCTTGTTTAGGGGATGTG+GGG - chr5_2:53510237-53510256 Msa0776050:CDS 45.0%
ACGCAGTCAATTGCAATCCA+AGG + chr5_2:53510997-53511016 None:intergenic 45.0%
TCTGTAACCTTGCACGATGA+AGG - chr5_2:53511050-53511069 Msa0776050:CDS 45.0%
CTGTAACCTTGCACGATGAA+GGG - chr5_2:53511051-53511070 Msa0776050:CDS 45.0%
TCTTGGTAAAAACAGGGCAG+TGG - chr5_2:53511124-53511143 Msa0776050:CDS 45.0%
!! AGAGCAAAAGTAGAAGCACC+TGG + chr5_2:53511238-53511257 None:intergenic 45.0%
TTCACTACTTGCTCCTTGCT+TGG - chr5_2:53512392-53512411 Msa0776050:CDS 45.0%
TCACTACTTGCTCCTTGCTT+GGG - chr5_2:53512393-53512412 Msa0776050:CDS 45.0%
AAGGAAGAATGGCTGCAAAC+AGG - chr5_2:53512620-53512639 Msa0776050:CDS 45.0%
AGGAAGAATGGCTGCAAACA+GGG - chr5_2:53512621-53512640 Msa0776050:CDS 45.0%
TGTTGTTGATGTTGACGGAG+AGG - chr5_2:53513292-53513311 Msa0776050:intron 45.0%
CAACGCAAGATACTACAGCA+GGG + chr5_2:53513358-53513377 None:intergenic 45.0%
TCAACGCAAGATACTACAGC+AGG + chr5_2:53513359-53513378 None:intergenic 45.0%
GAGAGACTTGAGTTTCAGGA+TGG - chr5_2:53513383-53513402 Msa0776050:intron 45.0%
GAACTTCGGAGAACACAACA+AGG + chr5_2:53513412-53513431 None:intergenic 45.0%
GTTGTGTTCTCCGAAGTTCA+TGG - chr5_2:53513413-53513432 Msa0776050:intron 45.0%
TCATTGAGTGCTTCCCTTAG+AGG + chr5_2:53513590-53513609 None:intergenic 45.0%
TCGCTAAGAAGAAATTCGCC+TGG + chr5_2:53513614-53513633 None:intergenic 45.0%
ATGCTAGATGCAGTAGAGGT+GGG + chr5_2:53513655-53513674 None:intergenic 45.0%
AATGCTAGATGCAGTAGAGG+TGG + chr5_2:53513656-53513675 None:intergenic 45.0%
TGGAATGCTAGATGCAGTAG+AGG + chr5_2:53513659-53513678 None:intergenic 45.0%
TCTACTGCATCTAGCATTCC+AGG - chr5_2:53513658-53513677 Msa0776050:intron 45.0%
AAATGAACTTATCCAGGGCC+TGG + chr5_2:53513679-53513698 None:intergenic 45.0%
!! ATGGGAACTTAGGTGATGGA+AGG - chr5_2:53513774-53513793 Msa0776050:intron 45.0%
!! GAACTTAGGTGATGGAAGGT+TGG - chr5_2:53513778-53513797 Msa0776050:intron 45.0%
GGCAAATTGCTGTAGAAGCT+TGG + chr5_2:53513816-53513835 None:intergenic 45.0%
!! AGCAATTTGCCTTTGGTGCT+AGG - chr5_2:53513825-53513844 Msa0776050:intron 45.0%
!! GCAATTTGCCTTTGGTGCTA+GGG - chr5_2:53513826-53513845 Msa0776050:intron 45.0%
! TAGGGCAGTATTGAACCCTA+TGG - chr5_2:53513844-53513863 Msa0776050:intron 45.0%
! GCCATGTTTGGTGGAATTGT+AGG - chr5_2:53513869-53513888 Msa0776050:intron 45.0%
TGGTGGAATTGTAGGACAAG+AGG - chr5_2:53513877-53513896 Msa0776050:intron 45.0%
AGGTTGTCAAAGCATGCTCT+GGG - chr5_2:53513897-53513916 Msa0776050:intron 45.0%
! GTATGGACTACCGTTAGACA+GGG + chr5_2:53514357-53514376 None:intergenic 45.0%
TAACGGTAGTCCATACCTTG+AGG - chr5_2:53514361-53514380 Msa0776050:intron 45.0%
AATTAAAATCTCCGGGGAGG+GGG + chr5_2:53514522-53514541 None:intergenic 45.0%
GCCTTAATGGGAGTTTCTTG+TGG - chr5_2:53514807-53514826 Msa0776050:intron 45.0%
GAGTTTCTTGTGGAGGTCAA+GGG - chr5_2:53514817-53514836 Msa0776050:intron 45.0%
CCTGGCCAATATTCCAATCA+CGG + chr5_2:53514905-53514924 None:intergenic 45.0%
CCCCACCTAACAGAAAACTA+TGG - chr5_2:53515179-53515198 Msa0776050:intron 45.0%
TTTCTCAGGTGGATCTCTTG+AGG + chr5_2:53515207-53515226 None:intergenic 45.0%
AAGCAGTGGTCAATGTTGTG+TGG + chr5_2:53515260-53515279 None:intergenic 45.0%
ACATTGACCACTGCTTGACT+TGG - chr5_2:53515264-53515283 Msa0776050:intron 45.0%
CATTGACCACTGCTTGACTT+GGG - chr5_2:53515265-53515284 Msa0776050:intron 45.0%
CGTTCTTGAATGCTTGGACA+AGG - chr5_2:53515418-53515437 Msa0776050:intron 45.0%
AACATACTTAAGTCTGGCCC+AGG + chr5_2:53515474-53515493 None:intergenic 45.0%
GTATGTCCTACACTCAAGCA+TGG - chr5_2:53515559-53515578 Msa0776050:intron 45.0%
!! CTAGTACTGGAGCTCCATTT+TGG - chr5_2:53515660-53515679 Msa0776050:intron 45.0%
!! CATTTTGGTCTGCACCGAAA+CGG - chr5_2:53515675-53515694 Msa0776050:intron 45.0%
! TGTTTCTGCGCGTAGTATAG+AGG + chr5_2:53515762-53515781 None:intergenic 45.0%
! TAGGGTTTTTCACCCAGTCA+GGG + chr5_2:53515799-53515818 None:intergenic 45.0%
! ATAGGGTTTTTCACCCAGTC+AGG + chr5_2:53515800-53515819 None:intergenic 45.0%
ACCTGACTTTCAGCCAAAGA+AGG - chr5_2:53515853-53515872 Msa0776050:intron 45.0%
TCCTTCTTTGGCTGAAAGTC+AGG + chr5_2:53515857-53515876 None:intergenic 45.0%
GAAGCCAATCCAGTTTGAGA+AGG - chr5_2:53516006-53516025 Msa0776050:intron 45.0%
AAGGACTTCACCAAGCAACA+TGG + chr5_2:53516066-53516085 None:intergenic 45.0%
TACCATATGGACGTGATAGC+TGG - chr5_2:53516241-53516260 Msa0776050:intron 45.0%
ACCATATGGACGTGATAGCT+GGG - chr5_2:53516242-53516261 Msa0776050:intron 45.0%
GTAATTGCGTGCTCTCATGT+TGG + chr5_2:53516272-53516291 None:intergenic 45.0%
TCCTGAAGTTGACAAGCTGA+AGG - chr5_2:53516297-53516316 Msa0776050:intron 45.0%
CTGAAGGCCAAGTTTATTGC+TGG - chr5_2:53516313-53516332 Msa0776050:intron 45.0%
GATTGCAACCTCAACTGCTA+TGG - chr5_2:53516351-53516370 Msa0776050:CDS 45.0%
TGTACAACTCCAGACAGACA+AGG + chr5_2:53516384-53516403 None:intergenic 45.0%
AAAGAGAGGCAGTGCTAAGT+TGG + chr5_2:53516455-53516474 None:intergenic 45.0%
! TGATGCTTGATGACCTTTGC+CGG + chr5_2:53516496-53516515 None:intergenic 45.0%
TGTTTCCTAGGCACAAAGAG+CGG - chr5_2:53516653-53516672 Msa0776050:exon 45.0%
AGCAAGGGATATTGCCAAGA+TGG - chr5_2:53516699-53516718 Msa0776050:intron 45.0%
CTATGTGACGACGGTATGAA+GGG + chr5_2:53516729-53516748 None:intergenic 45.0%
TCTATGTGACGACGGTATGA+AGG + chr5_2:53516730-53516749 None:intergenic 45.0%
! AGATGTTGTTGTGGCTTGTG+AGG - chr5_2:53516747-53516766 Msa0776050:intron 45.0%
TCCATATTCGTAGTGCCTTC+AGG - chr5_2:53516892-53516911 Msa0776050:intron 45.0%
!!! AAAATGTTATTTTTATTTTT+TGG - chr5_2:53509906-53509925 Msa0776050:intron 5.0%
!!! ATTTATTTTATTATTTTAAC+TGG + chr5_2:53511931-53511950 None:intergenic 5.0%
CGGCAATGAGAGAGAACGTT+TGG + chr5_2:53509061-53509080 None:intergenic 50.0%
GACAAGAGTTTCAGTAGCGG+CGG - chr5_2:53509539-53509558 Msa0776050:CDS 50.0%
! TTTGATTGCGGCGTCGAGTA+TGG - chr5_2:53509586-53509605 Msa0776050:CDS 50.0%
TAACCCGCAGGAGATTGATG+AGG - chr5_2:53509622-53509641 Msa0776050:CDS 50.0%
GATCCTCATCAATCTCCTGC+GGG + chr5_2:53509628-53509647 None:intergenic 50.0%
!! GCAGCTTGCTGTGTATGGTA+GGG - chr5_2:53509658-53509677 Msa0776050:CDS 50.0%
ATGGTAGGGAGACTATGAGG+AGG - chr5_2:53509672-53509691 Msa0776050:CDS 50.0%
! GCGAGTAGCGTTCTTGTTTC+CGG - chr5_2:53509701-53509720 Msa0776050:CDS 50.0%
! CGAGTAGCGTTCTTGTTTCC+GGG - chr5_2:53509702-53509721 Msa0776050:CDS 50.0%
GTGAAGAAGTGGAATGTCCG+GGG - chr5_2:53509970-53509989 Msa0776050:intron 50.0%
CCAATTGAGCTAAGCTCACG+GGG - chr5_2:53510034-53510053 Msa0776050:intron 50.0%
!! TGGGGACTTGGTGTTGAGAT+TGG - chr5_2:53510255-53510274 Msa0776050:CDS 50.0%
TACAGTCCCTTCATCGTGCA+AGG + chr5_2:53511060-53511079 None:intergenic 50.0%
GGCTTCTGTCAGTAAGCTTC+AGG - chr5_2:53511145-53511164 Msa0776050:CDS 50.0%
AGAGCTGAATCTGTACAGGG+TGG - chr5_2:53511719-53511738 Msa0776050:intron 50.0%
GAGCTGAATCTGTACAGGGT+GGG - chr5_2:53511720-53511739 Msa0776050:intron 50.0%
ATTGTGGTGGCTAGGGAGTA+TGG - chr5_2:53512146-53512165 Msa0776050:CDS 50.0%
TAATAAGGGTGGCCCAAGCA+AGG + chr5_2:53512408-53512427 None:intergenic 50.0%
CAATAGGAGGCTGATGACTG+TGG + chr5_2:53513205-53513224 None:intergenic 50.0%
AGCAGGGTTGTCATTGCTGA+TGG + chr5_2:53513342-53513361 None:intergenic 50.0%
CACACAGGCCAAACAACCAA+AGG - chr5_2:53513550-53513569 Msa0776050:intron 50.0%
!! AGGGAAGCACTCAATGATCC+AGG - chr5_2:53513593-53513612 Msa0776050:intron 50.0%
ATCTTCCTCTGAACCAGCGA+CGG + chr5_2:53513720-53513739 None:intergenic 50.0%
CAATACTGCCCTAGCACCAA+AGG + chr5_2:53513837-53513856 None:intergenic 50.0%
AACCCTATGGCTGCCATGTT+TGG - chr5_2:53513857-53513876 Msa0776050:intron 50.0%
CACCAAACATGGCAGCCATA+GGG + chr5_2:53513862-53513881 None:intergenic 50.0%
GAGGTTGTCAAAGCATGCTC+TGG - chr5_2:53513896-53513915 Msa0776050:intron 50.0%
GGGATTGTTGTACAGGCAGA+GGG + chr5_2:53514337-53514356 None:intergenic 50.0%
AGGGATTGTTGTACAGGCAG+AGG + chr5_2:53514338-53514357 None:intergenic 50.0%
! GGTATGGACTACCGTTAGAC+AGG + chr5_2:53514358-53514377 None:intergenic 50.0%
GGGGTAAACTGAATACGGCA+AGG + chr5_2:53514503-53514522 None:intergenic 50.0%
GGGAGGGGGTAAACTGAATA+CGG + chr5_2:53514508-53514527 None:intergenic 50.0%
TATTCAGTTTACCCCCTCCC+CGG - chr5_2:53514508-53514527 Msa0776050:intron 50.0%
!! TGTTGTTGGTTCTGGTGCAC+TGG - chr5_2:53514761-53514780 Msa0776050:intron 50.0%
!! GTTGTTGGTTCTGGTGCACT+GGG - chr5_2:53514762-53514781 Msa0776050:intron 50.0%
!! TTGTTGGTTCTGGTGCACTG+GGG - chr5_2:53514763-53514782 Msa0776050:intron 50.0%
GGAGTTTCTTGTGGAGGTCA+AGG - chr5_2:53514816-53514835 Msa0776050:intron 50.0%
CCGTGATTGGAATATTGGCC+AGG - chr5_2:53514902-53514921 Msa0776050:CDS 50.0%
TAGGTGGGGAATGACCATCT+GGG + chr5_2:53515168-53515187 None:intergenic 50.0%
TTAGGTGGGGAATGACCATC+TGG + chr5_2:53515169-53515188 None:intergenic 50.0%
! ATCGGTGCTTGTTTCTCAGG+TGG + chr5_2:53515218-53515237 None:intergenic 50.0%
! CACATCGGTGCTTGTTTCTC+AGG + chr5_2:53515221-53515240 None:intergenic 50.0%
TTGGGCTCGATCTGAGTTTG+AGG - chr5_2:53515283-53515302 Msa0776050:intron 50.0%
TGGGCTCGATCTGAGTTTGA+GGG - chr5_2:53515284-53515303 Msa0776050:intron 50.0%
TGCTCAGGCACGGGATAATT+TGG - chr5_2:53515391-53515410 Msa0776050:intron 50.0%
! CTTGGACAAGGAGAAGTGTG+AGG - chr5_2:53515430-53515449 Msa0776050:intron 50.0%
GTACTAGTTGCAGCATCCTC+AGG + chr5_2:53515647-53515666 None:intergenic 50.0%
GAGGATGCTGCAACTAGTAC+TGG - chr5_2:53515647-53515666 Msa0776050:intron 50.0%
! CGTTTCGGTGCAGACCAAAA+TGG + chr5_2:53515677-53515696 None:intergenic 50.0%
! GAGATGACTTGGATCAGAGG+AGG + chr5_2:53515723-53515742 None:intergenic 50.0%
! CTGGAGATGACTTGGATCAG+AGG + chr5_2:53515726-53515745 None:intergenic 50.0%
TAGAGGCTGCCATCAGAAAC+TGG + chr5_2:53515745-53515764 None:intergenic 50.0%
! TTTTCACCCAGTCAGGGGTA+GGG + chr5_2:53515793-53515812 None:intergenic 50.0%
! TTTTTCACCCAGTCAGGGGT+AGG + chr5_2:53515794-53515813 None:intergenic 50.0%
! AGGGTTTTTCACCCAGTCAG+GGG + chr5_2:53515798-53515817 None:intergenic 50.0%
CACAGAAGCAGTAGAGAGAC+TGG + chr5_2:53515909-53515928 None:intergenic 50.0%
CAGTCTCTCTACTGCTTCTG+TGG - chr5_2:53515907-53515926 Msa0776050:intron 50.0%
TTGCGGTCAAATCTGCAACC+AGG - chr5_2:53515974-53515993 Msa0776050:intron 50.0%
CAAATCTGCAACCAGGCTTC+AGG - chr5_2:53515981-53516000 Msa0776050:intron 50.0%
! ATTGGCTTCATCCTGAAGCC+TGG + chr5_2:53515995-53516014 None:intergenic 50.0%
GCCTTCAGCTTGTCAACTTC+AGG + chr5_2:53516301-53516320 None:intergenic 50.0%
AGGCCAAGTTTATTGCTGGG+CGG - chr5_2:53516317-53516336 Msa0776050:intron 50.0%
GATCCGCCCAGCAATAAACT+TGG + chr5_2:53516323-53516342 None:intergenic 50.0%
! AGGCAGTGCTAAGTTGGCAA+AGG + chr5_2:53516449-53516468 None:intergenic 50.0%
! AGCACTGCCTCTCTTTTCCA+TGG - chr5_2:53516459-53516478 Msa0776050:CDS 50.0%
! TTGATGACCTTTGCCGGAAC+TGG + chr5_2:53516490-53516509 None:intergenic 50.0%
! GTTGGACTGTTTGGGACAGA+TGG - chr5_2:53516524-53516543 Msa0776050:CDS 50.0%
TCAAGAAGCTCCCTGAGAGT+AGG + chr5_2:53516565-53516584 None:intergenic 50.0%
CTCTCAGGGAGCTTCTTGAT+TGG - chr5_2:53516566-53516585 Msa0776050:CDS 50.0%
! GGAGCTTCTTGATTGGCTGA+AGG - chr5_2:53516573-53516592 Msa0776050:CDS 50.0%
!! GCCTGAAGGCACTACGAATA+TGG + chr5_2:53516896-53516915 None:intergenic 50.0%
ATTCGTAGTGCCTTCAGGCA+AGG - chr5_2:53516897-53516916 Msa0776050:intron 50.0%
ATGTTTGTCGCCTTGCCTGA+AGG + chr5_2:53516910-53516929 None:intergenic 50.0%
! CAGGTTCGGTTAAGAAGGCG+CGG - chr5_2:53509489-53509508 Msa0776050:CDS 55.0%
! TTCGGTTAAGAAGGCGCGGA+TGG - chr5_2:53509493-53509512 Msa0776050:CDS 55.0%
! TCGGTTAAGAAGGCGCGGAT+GGG - chr5_2:53509494-53509513 Msa0776050:CDS 55.0%
CGACGCCGCAATCAAATTCC+CGG + chr5_2:53509582-53509601 None:intergenic 55.0%
!! AGCAGGCAGCTTGCTGTGTA+TGG - chr5_2:53509653-53509672 Msa0776050:CDS 55.0%
!! GGCAGCTTGCTGTGTATGGT+AGG - chr5_2:53509657-53509676 Msa0776050:CDS 55.0%
! GTTCTTGTTTCCGGGATGCG+AGG - chr5_2:53509710-53509729 Msa0776050:CDS 55.0%
!! CGAGGACTTGGTGCTGAGAT+TGG - chr5_2:53509728-53509747 Msa0776050:CDS 55.0%
CCCCGTGAGCTTAGCTCAAT+TGG + chr5_2:53510037-53510056 None:intergenic 55.0%
GTTTAGGGGATGTGGGGACT+TGG - chr5_2:53510243-53510262 Msa0776050:CDS 55.0%
GACGGAGAGGAACCACATAC+TGG - chr5_2:53513305-53513324 Msa0776050:intron 55.0%
TCTTCCTCTGAACCAGCGAC+GGG + chr5_2:53513719-53513738 None:intergenic 55.0%
CCACCAAACATGGCAGCCAT+AGG + chr5_2:53513863-53513882 None:intergenic 55.0%
CCTATGGCTGCCATGTTTGG+TGG - chr5_2:53513860-53513879 Msa0776050:intron 55.0%
GGCAGTTCCTCTTCCGTGAT+TGG - chr5_2:53514889-53514908 Msa0776050:CDS 55.0%
AGCAGCTGTTGCAGCAACTG+TGG + chr5_2:53514934-53514953 None:intergenic 55.0%
ATCGAGCCCAAGTCAAGCAG+TGG + chr5_2:53515274-53515293 None:intergenic 55.0%
! GAAGAACGCTGGTGATGCTC+AGG - chr5_2:53515376-53515395 Msa0776050:intron 55.0%
GGAGCGCGTTCTTGAATGCT+TGG - chr5_2:53515412-53515431 Msa0776050:intron 55.0%
AGTGGACGAGGGAACCGTTT+CGG + chr5_2:53515692-53515711 None:intergenic 55.0%
AGGAGAACTGCAGTGGACGA+GGG + chr5_2:53515703-53515722 None:intergenic 55.0%
TCAGAGGAGGAGAACTGCAG+TGG + chr5_2:53515710-53515729 None:intergenic 55.0%
TTGGTATCCCTACCCCTGAC+TGG - chr5_2:53515783-53515802 Msa0776050:intron 55.0%
TGGTATCCCTACCCCTGACT+GGG - chr5_2:53515784-53515803 Msa0776050:intron 55.0%
GCCCAGCTATCACGTCCATA+TGG + chr5_2:53516246-53516265 None:intergenic 55.0%
GCAGTTGAGGTTGCAATCGC+TGG + chr5_2:53516349-53516368 None:intergenic 55.0%
ACCTCAACTGCTATGGCCAC+TGG - chr5_2:53516358-53516377 Msa0776050:CDS 55.0%
! GGATGGAGGGCACAAACTTG+AGG - chr5_2:53516411-53516430 Msa0776050:CDS 55.0%
GGCTCAGCCATGGAAAAGAG+AGG + chr5_2:53516469-53516488 None:intergenic 55.0%
TTCCATGGCTGAGCCAGTTC+CGG - chr5_2:53516474-53516493 Msa0776050:CDS 55.0%
TCCTAGGCACAAAGAGCGGA+TGG - chr5_2:53516657-53516676 Msa0776050:exon 55.0%
TCCATCCGCTCTTTGTGCCT+AGG + chr5_2:53516661-53516680 None:intergenic 55.0%
!! GCGGCGTCGAGTATGGCTTT+TGG - chr5_2:53509593-53509612 Msa0776050:CDS 60.0%
GTTTCCGGGATGCGAGGACT+TGG - chr5_2:53509716-53509735 Msa0776050:CDS 60.0%
AGCACCAAGTCCTCGCATCC+CGG + chr5_2:53509723-53509742 None:intergenic 60.0%
GGTGGAAGAGGTTCGAACCC+CGG + chr5_2:53509990-53510009 None:intergenic 60.0%
GCATCTAGCATTCCAGGCCC+TGG - chr5_2:53513664-53513683 Msa0776050:intron 60.0%
CTTCCTCTGAACCAGCGACG+GGG + chr5_2:53513718-53513737 None:intergenic 60.0%
CAGCAACTGTGGACTTCGCC+TGG + chr5_2:53514923-53514942 None:intergenic 60.0%
! ACGCTGGTGATGCTCAGGCA+CGG - chr5_2:53515381-53515400 Msa0776050:intron 60.0%
GAGGAGAACTGCAGTGGACG+AGG + chr5_2:53515704-53515723 None:intergenic 60.0%
GCCAGTGGCCATAGCAGTTG+AGG + chr5_2:53516362-53516381 None:intergenic 60.0%
CTCCAGACAGACAAGGCCAG+TGG + chr5_2:53516377-53516396 None:intergenic 60.0%
CTGAACCAGCGACGGGGAAG+CGG + chr5_2:53513712-53513731 None:intergenic 65.0%
!! CTTCCCCGTCGCTGGTTCAG+AGG - chr5_2:53513712-53513731 Msa0776050:intron 65.0%
! CGCTGGTGATGCTCAGGCAC+GGG - chr5_2:53515382-53515401 Msa0776050:intron 65.0%
!! GGCCACTGGCCTTGTCTGTC+TGG - chr5_2:53516372-53516391 Msa0776050:CDS 65.0%
! TGCCGGAACTGGCTCAGCCA+TGG + chr5_2:53516479-53516498 None:intergenic 65.0%
GGCTGAGCCAGTTCCGGCAA+AGG - chr5_2:53516480-53516499 Msa0776050:CDS 65.0%
ATAGGCCGCTTCCCCGTCGC+TGG - chr5_2:53513704-53513723 Msa0776050:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 53508982 53517087 53508982 ID=Msa0776050;Name=Msa0776050
chr5_2 mRNA 53508982 53517087 53508982 ID=Msa0776050-mRNA-1;Parent=Msa0776050;Name=Msa0776050-mRNA-1;_AED=0.28;_eAED=0.28;_QI=141|1|1|1|0.83|0.71|7|265|1086
chr5_2 exon 53508982 53509843 53508982 ID=Msa0776050-mRNA-1:exon:16032;Parent=Msa0776050-mRNA-1
chr5_2 exon 53510042 53510474 53510042 ID=Msa0776050-mRNA-1:exon:16031;Parent=Msa0776050-mRNA-1
chr5_2 exon 53510583 53511451 53510583 ID=Msa0776050-mRNA-1:exon:16030;Parent=Msa0776050-mRNA-1
chr5_2 exon 53512129 53512923 53512129 ID=Msa0776050-mRNA-1:exon:16029;Parent=Msa0776050-mRNA-1
chr5_2 exon 53514831 53515048 53514831 ID=Msa0776050-mRNA-1:exon:16028;Parent=Msa0776050-mRNA-1
chr5_2 exon 53516320 53516681 53516320 ID=Msa0776050-mRNA-1:exon:16027;Parent=Msa0776050-mRNA-1
chr5_2 exon 53516960 53517087 53516960 ID=Msa0776050-mRNA-1:exon:16026;Parent=Msa0776050-mRNA-1
chr5_2 five_prime_UTR 53516960 53517087 53516960 ID=Msa0776050-mRNA-1:five_prime_utr;Parent=Msa0776050-mRNA-1
chr5_2 five_prime_UTR 53516669 53516681 53516669 ID=Msa0776050-mRNA-1:five_prime_utr;Parent=Msa0776050-mRNA-1
chr5_2 CDS 53516320 53516668 53516320 ID=Msa0776050-mRNA-1:cds;Parent=Msa0776050-mRNA-1
chr5_2 CDS 53514831 53515048 53514831 ID=Msa0776050-mRNA-1:cds;Parent=Msa0776050-mRNA-1
chr5_2 CDS 53512129 53512923 53512129 ID=Msa0776050-mRNA-1:cds;Parent=Msa0776050-mRNA-1
chr5_2 CDS 53510583 53511451 53510583 ID=Msa0776050-mRNA-1:cds;Parent=Msa0776050-mRNA-1
chr5_2 CDS 53510042 53510474 53510042 ID=Msa0776050-mRNA-1:cds;Parent=Msa0776050-mRNA-1
chr5_2 CDS 53509247 53509843 53509247 ID=Msa0776050-mRNA-1:cds;Parent=Msa0776050-mRNA-1
chr5_2 three_prime_UTR 53508982 53509246 53508982 ID=Msa0776050-mRNA-1:three_prime_utr;Parent=Msa0776050-mRNA-1
Gene Sequence

>Msa0776050

ATGCTTCCAAGAAAGAGAGTTAGCGAAGGAGAAGTTGTTGTAGAAGAACCGATCAACAACAGCAACAGTAACAGTAACAGTAACAACTCAGGTTCGGTTAAGAAGGCGCGGATGGGTGAATCGAACGTGAACGAGAGTGACAAGAGTTTCAGTAGCGGCGGCGATAACAGTAACAGTACCGGGAATTTGATTGCGGCGTCGAGTATGGCTTTTGGAAATTCTAACCCGCAGGAGATTGATGAGGATCTGCATAGCAGGCAGCTTGCTGTGTATGGTAGGGAGACTATGAGGAGGCTTTTCGCGAGTAGCGTTCTTGTTTCCGGGATGCGAGGACTTGGTGCTGAGATTGCAAAGAATCTTATTCTTGCTGGTGTAAAATCTGTAACCTTGCACGATGAAGGGACTGTAGAGTTATGGGATTTGTCAAGCAACTTTGTGTTTTCAGAAAACGATCTTGGTAAAAACAGGGCAGTGGCTTCTGTCAGTAAGCTTCAGGAACTCAATAACGCCGTGCTTGTACTAAGCTTGACAACTGAGCTGACCAAAGAACAACTTTCTAATTTCCAGGCTGTTGTGTTTACCGAAGTCAGTCTTGAGAAAGCTGTTGAGTTCAATGATTACTGCCACAGTCATCAGCCTCCTATTGCTTTTATTAAAACTGAAGTTAGAGGTCTTTTTGGTTCCGTGTTTTGTGATTTTGGGCCTGAGTTTACTGTTGTTGATGTTGACGGAGAGGAACCACATACTGGAATAATTGCGTCCATCAGCAATGACAACCCTGCTGTAGTATCTTGCGTTGATGATGAGAGACTTGAGTTTCAGGATGGAGACCTTGTTGTGTTCTCCGAAGTTCATGGTATGAAAGAGTTGAATGACGGAAAGCCAAGAAAGATTAAAAATGCTAGAGCATATTCATTCACTCTTGAAGAAGACACCACAAACTATGGTGCATATGAAAAAGGTGGTATTGTCACACAGGCCAAACAACCAAAGGTTTTGAACTTCAAACCTCTAAGGGAAGCACTCAATGATCCAGGCGAATTTCTTCTTAGCGATTTTTCTAAGTTTGATCGCCCACCTCTACTGCATCTAGCATTCCAGGCCCTGGATAAGTTCATTTCTGAGATAGGCCGCTTCCCCGTCGCTGGTTCAGAGGAAGATGCACATAAATTCATTTCTATCGCCAGTAATATTAATGGGAACTTAGGTGATGGAAGGTTGGAAGATGTGAATCCCAAGCTTCTACAGCAATTTGCCTTTGGTGCTAGGGCAGTATTGAACCCTATGGCTGCCATGTTTGGTGGAATTGTAGGACAAGAGGTTGTCAAAGCATGCTCTGGGAAATTTCATCCACTGTTTCAGTTTTTCTACTTCGACTCTGTGGAATCACTTCCGACAGAACCATTGCATCCTAATGATTTAAAACCAATAAATAGTCGTTACGATGCTCAGATTTCAGTTTTTGGGCAAAAGTTACAGAAGAAATTTGAAGATGCTAAAGTGTTTGTTGTTGGTTCTGGTGCACTGGGGTGTGAATTTTTAAAGAATTTTGCCTTAATGGGAGTTTCTTGTGGAGGTCAAGGGAAGCTTACAGTTACTGATGATGATGTCATAGAGAAGAGTAACTTAAGCAGGCAGTTCCTCTTCCGTGATTGGAATATTGGCCAGGCGAAGTCCACAGTTGCTGCAACAGCTGCTGCATCTATAAACCCTCAACTGAATATTGAAGCTCTGCAAAACCGTGTTAGCTCTGAAACTGAAAATGTGTTTCATGATACCTTTTGGGAAAACTTGAGTGTTGTGATTAATGCACTAGATAATGTGAATGCAAGACTATACGTGGATCAGAGATGCCTGTATTTCCAGAAACCACTTCTTGAATCTGGAACTCTTGGAGCTAAATGCAATACCCAGATGGTCATTCCCCACCTAACAGAAAACTATGGTGCCTCAAGAGATCCACCTGAGAAACAAGCACCGATGTGTACCGTGCATTCATTTCCACACAACATTGACCACTGCTTGACTTGGGCTCGATCTGAGTTTGAGGGTTTGCTTGAGAAAACTCCAGCTGAAGTAAATGCATACTTATCCAACCCAAGTGAATATACTAATGCAATGAAGAACGCTGGTGATGCTCAGGCACGGGATAATTTGGAGCGCGTTCTTGAATGCTTGGACAAGGAGAAGTGTGAGGCTTTTGAAGATTGTATTACCTGGGCCAGACTTAAGTTTGAAGATTATTTTGCTAACCGAGTGAAGCAGTTAGCTTATACTTTTCCTGAGGATGCTGCAACTAGTACTGGAGCTCCATTTTGGTCTGCACCGAAACGGTTCCCTCGTCCACTGCAGTTCTCCTCCTCTGATCCAAGTCATCTCCAGTTTCTGATGGCAGCCTCTATACTACGCGCAGAAACATTTGGTATCCCTACCCCTGACTGGGTGAAAAACCCTATGAAGTTGGCAGAAGTTGTTGATAGAATGATAGTACCTGACTTTCAGCCAAAGAAGGATGCAAAAATAGTGACAGATGAGAAGGCAACCAGTCTCTCTACTGCTTCTGTGGATGATGCAGTTGTTATTGATGATCTAATTGTTAAGTTGGAGAGATTGCGGTCAAATCTGCAACCAGGCTTCAGGATGAAGCCAATCCAGTTTGAGAAGGATGATGATACAAACTACCATATGGACGTGATAGCTGGGCTTGCCAACATGAGAGCACGCAATTACAGCATTCCTGAAGTTGACAAGCTGAAGGCCAAGTTTATTGCTGGGCGGATCATTCCAGCGATTGCAACCTCAACTGCTATGGCCACTGGCCTTGTCTGTCTGGAGTTGTACAAAGCTTTGGATGGAGGGCACAAACTTGAGGACTACCGAAACACCTTTGCCAACTTAGCACTGCCTCTCTTTTCCATGGCTGAGCCAGTTCCGGCAAAGGTCATCAAGCATCAAGATTTGAGTTGGACTGTTTGGGACAGATGGATTATAAAAGACAATCCTACTCTCAGGGAGCTTCTTGATTGGCTGAAGGAAAAAGGTTTGAATGCTTATAGTATTTCTTGTGGAAGTTGCCTGCTTTTCAATAGCATGTTTCCTAGGCACAAAGAGCGGATGGACAAAAAAGTTGTAGATTTAGCAAGGGATATTGCCAAGATGGAAATCCCTTCATACCGTCGTCACATAGATGTTGTTGTGGCTTGTGAGGATGACGATGATAATGACATTGATATCCCTCAAGTATCCATTTATTTCCGTTGA
Protein sequence

>Msa0776050

MLPRKRVSEGEVVVEEPINNSNSNSNSNNSGSVKKARMGESNVNESDKSFSSGGDNSNSTGNLIAASSMAFGNSNPQEIDEDLHSRQLAVYGRETMRRLFASSVLVSGMRGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSENDLGKNRAVASVSKLQELNNAVLVLSLTTELTKEQLSNFQAVVFTEVSLEKAVEFNDYCHSHQPPIAFIKTEVRGLFGSVFCDFGPEFTVVDVDGEEPHTGIIASISNDNPAVVSCVDDERLEFQDGDLVVFSEVHGMKELNDGKPRKIKNARAYSFTLEEDTTNYGAYEKGGIVTQAKQPKVLNFKPLREALNDPGEFLLSDFSKFDRPPLLHLAFQALDKFISEIGRFPVAGSEEDAHKFISIASNINGNLGDGRLEDVNPKLLQQFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLFQFFYFDSVESLPTEPLHPNDLKPINSRYDAQISVFGQKLQKKFEDAKVFVVGSGALGCEFLKNFALMGVSCGGQGKLTVTDDDVIEKSNLSRQFLFRDWNIGQAKSTVAATAAASINPQLNIEALQNRVSSETENVFHDTFWENLSVVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPSEYTNAMKNAGDAQARDNLERVLECLDKEKCEAFEDCITWARLKFEDYFANRVKQLAYTFPEDAATSTGAPFWSAPKRFPRPLQFSSSDPSHLQFLMAASILRAETFGIPTPDWVKNPMKLAEVVDRMIVPDFQPKKDAKIVTDEKATSLSTASVDDAVVIDDLIVKLERLRSNLQPGFRMKPIQFEKDDDTNYHMDVIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALDGGHKLEDYRNTFANLALPLFSMAEPVPAKVIKHQDLSWTVWDRWIIKDNPTLRELLDWLKEKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLARDIAKMEIPSYRRHIDVVVACEDDDDNDIDIPQVSIYFR*