AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0776060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776060 MtrunA17_Chr5g0431171 98.061 1083 20 1 1 1082 1 1083 0.0 2204
Msa0776060 MtrunA17_Chr5g0431151 97.417 1084 26 2 1 1082 1 1084 0.0 2180
Msa0776060 MtrunA17_Chr0c01g0489601 84.791 743 68 5 283 1025 1 698 0.0 1255
Msa0776060 MtrunA17_Chr0c01g0489611 95.238 84 4 0 186 269 7 90 2.94e-51 174
Msa0776060 MtrunA17_Chr8g0352371 40.761 184 101 2 492 675 6 181 3.53e-34 140
Msa0776060 MtrunA17_Chr4g0074481 32.850 207 111 7 485 674 37 232 2.08e-22 102
Msa0776060 MtrunA17_Chr5g0444711 28.571 168 108 5 464 628 57 215 6.29e-14 75.5
Msa0776060 MtrunA17_Chr8g0386251 34.395 157 97 3 79 229 15 171 2.31e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776060 AT5G06460.1 81.528 1034 189 1 50 1081 43 1076 0.0 1790
Msa0776060 AT2G30110.1 83.006 1018 173 0 65 1082 63 1080 0.0 1787
Msa0776060 AT2G21470.1 39.474 190 107 2 486 675 4 185 6.60e-33 136
Msa0776060 AT2G21470.3 39.474 190 107 2 486 675 4 185 7.87e-33 136
Msa0776060 AT2G21470.2 39.474 190 107 2 486 675 4 185 1.28e-32 136
Msa0776060 AT5G19180.1 31.100 209 116 7 483 674 34 231 4.46e-21 98.2
Msa0776060 AT5G19180.2 30.918 207 115 7 485 674 36 231 4.55e-21 97.4
Msa0776060 AT5G50580.1 34.177 158 96 3 79 229 13 169 8.53e-14 74.3
Msa0776060 AT5G50680.2 34.177 158 96 3 79 229 13 169 8.53e-14 74.3
Msa0776060 AT5G50580.2 34.177 158 96 3 79 229 13 169 9.05e-14 74.3
Msa0776060 AT5G50680.1 34.177 158 96 3 79 229 13 169 9.05e-14 74.3
Msa0776060 AT4G24940.1 31.875 160 97 3 79 229 13 169 6.90e-13 71.6
Msa0776060 AT5G55130.1 31.447 159 90 5 476 628 71 216 4.15e-12 70.5

Find 266 sgRNAs with CRISPR-Local

Find 592 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTTCATCCACTGTTTC+AGG 0.114709 5_2:-53525749 Msa0776060:intron
CAGATTCAAGAAGTGGTTTC+TGG 0.150804 5_2:+53524531 None:intergenic
ATAACTTCTGCCAACTTTAT+AGG 0.155858 5_2:+53523833 None:intergenic
TAAGTTACCATTAATATTAT+TGG 0.177026 5_2:+53525906 None:intergenic
TTTAAAGAATCTTGCCTTAA+TGG 0.185243 5_2:-53524855 Msa0776060:CDS
GCATCGTAACGACTATTTAT+TGG 0.188335 5_2:+53524968 None:intergenic
TCTATCGCCAATAATATTAA+TGG 0.201499 5_2:-53525913 Msa0776060:CDS
GCGAGTAGTGTTCTTGTTTC+CGG 0.221823 5_2:-53530857 Msa0776060:CDS
CTTGATTGGCTGAAGGAAAA+AGG 0.223345 5_2:-53523059 Msa0776060:CDS
CAGAAACCACTTCTTGAATC+TGG 0.245740 5_2:-53524530 Msa0776060:CDS
TGATGAGAGACTTGAGTTTC+AGG 0.248535 5_2:-53526289 Msa0776060:CDS
AACTGTGTAAAGAGTGTAAT+AGG 0.260159 5_2:+53531448 None:intergenic
TTTATTAAAACTGAAGTTAG+AGG 0.276986 5_2:-53526441 Msa0776060:CDS
ATGTGTTTCATGATACCTTT+TGG 0.278407 5_2:-53524631 Msa0776060:CDS
GCCTTCAGCTTGTCAACTTC+AGG 0.281009 5_2:+53523341 None:intergenic
GAAATTAGAAAGTTGTTCTT+TGG 0.281989 5_2:+53528930 None:intergenic
TTTGATTGCGGCGTCGAGTA+TGG 0.282748 5_2:-53530972 Msa0776060:CDS
TAACTTCTGCCAACTTTATA+GGG 0.284940 5_2:+53523834 None:intergenic
CTCTTCCGCGATTGGAATAT+TGG 0.291437 5_2:-53524752 Msa0776060:CDS
TGCTCAGGCAAGGGATAATT+TGG 0.292967 5_2:-53524258 Msa0776060:CDS
AGAACAACTTTCTAATTTCC+AGG 0.293474 5_2:-53528926 Msa0776060:intron
CAAATCTGCCACCAGGATTC+AGG 0.294269 5_2:-53523667 Msa0776060:CDS
AACTATGGTGCCTATGAAAA+AGG 0.294704 5_2:-53526150 Msa0776060:CDS
AACAGCTCAACGGAAATAAA+TGG 0.294987 5_2:+53522833 None:intergenic
CACATCGGTGCTTGTTTCTC+AGG 0.295496 5_2:+53524431 None:intergenic
GTTGTATTCTCTGAAGTTCA+TGG 0.298429 5_2:-53526255 Msa0776060:CDS
TTAAAGAATCTTGCCTTAAT+GGG 0.306714 5_2:-53524854 Msa0776060:CDS
CGAGTAGTGTTCTTGTTTCC+GGG 0.310389 5_2:-53530856 Msa0776060:CDS
TGATGCTTGATGACCTTTGC+CGG 0.329314 5_2:+53523146 None:intergenic
GGCCACTGGCCTTGTCTGTC+TGG 0.330511 5_2:-53523267 Msa0776060:CDS
CTGTTGCTGTTGTTGTTAAT+CGG 0.333462 5_2:+53531097 None:intergenic
TCATTGAGTGCTTCCCTTAG+AGG 0.339380 5_2:+53526081 None:intergenic
TTGGTATCCCTACCCCTGAC+TGG 0.344953 5_2:-53523865 Msa0776060:CDS
TTCTGAAAACACAAAGTTGC+TGG 0.346221 5_2:+53529047 None:intergenic
TTCCATGGCTGAGCCAGTTC+CGG 0.347480 5_2:-53523165 Msa0776060:CDS
TCCTTATTCGTAGTGCCTTC+AGG 0.352622 5_2:-53522747 Msa0776060:three_prime_UTR
TAATAGGGTTTGGTTTGATT+TGG 0.353051 5_2:+53531464 None:intergenic
AACCCTATGGCTGCCATGTT+TGG 0.355017 5_2:-53525811 Msa0776060:CDS
GCCTGAAGGCACTACGAATA+AGG 0.356272 5_2:+53522746 None:intergenic
GCAAAGAATCTTATTCTTGC+TGG 0.359597 5_2:-53529123 Msa0776060:CDS
CTGAAGGCCAAGTTTATTGC+TGG 0.364675 5_2:-53523326 Msa0776060:CDS
CTCTCAGGGAGCTTCTTGAT+TGG 0.364777 5_2:-53523073 Msa0776060:CDS
TTGATGACCTTTGCCGGAAC+TGG 0.366564 5_2:+53523152 None:intergenic
GCGGCGTCGAGTATGGCTTT+TGG 0.370489 5_2:-53530965 Msa0776060:CDS
AAAGTGTTTGTTGTTGGATC+TGG 0.376561 5_2:-53524896 Msa0776060:CDS
CTTCTACAGCAATTTGCCTT+TGG 0.378864 5_2:-53525850 Msa0776060:CDS
TCCTTCTTTGGCTGAAAGTC+AGG 0.379261 5_2:+53523794 None:intergenic
CTTCTTGAATCTGGAACTCT+TGG 0.385963 5_2:-53524521 Msa0776060:CDS
TGTTGTTGGATCTGGTGCAC+TGG 0.390073 5_2:-53524888 Msa0776060:CDS
GTTTCCGGGATGCGAGGACT+TGG 0.393100 5_2:-53530842 Msa0776060:CDS
AAATATGCATTTACTTCAGC+TGG 0.393678 5_2:+53524326 None:intergenic
GATAAGTTCATTTCTGAGAT+AGG 0.395303 5_2:-53525982 Msa0776060:CDS
TCCACAAGAAACTCCCATTA+AGG 0.397211 5_2:+53524841 None:intergenic
TATACTGCATCTAGCATTCC+AGG 0.399413 5_2:-53526010 Msa0776060:CDS
AGCAGGCAGCTTGCTGTGTA+TGG 0.400305 5_2:-53530905 Msa0776060:CDS
CGTTTCGGTGCAGACCAAAA+TGG 0.400852 5_2:+53523974 None:intergenic
GTAAAGAGTGTAATAGGGTT+TGG 0.404911 5_2:+53531454 None:intergenic
GAAGAAGACACCACAAACTA+TGG 0.406363 5_2:-53526165 Msa0776060:CDS
TTCATAGGCACCATAGTTTG+TGG 0.407816 5_2:+53526155 None:intergenic
TAGAGGCTGCCATCAGAAAC+TGG 0.408365 5_2:+53523906 None:intergenic
GAAGTGGTTTCTGGAAATAT+AGG 0.411709 5_2:+53524540 None:intergenic
CTAAGTTGGCAAAGGTGTTT+CGG 0.417033 5_2:+53523201 None:intergenic
GGCAAATTGCTGTAGAAGCT+TGG 0.417666 5_2:+53525855 None:intergenic
TACCATATGGATGTGATAGC+TGG 0.417808 5_2:-53523398 Msa0776060:CDS
GTTCAAAACCTGTGGTTGTT+TGG 0.421129 5_2:+53526110 None:intergenic
ACATTGACCACTGCTTGACT+TGG 0.423197 5_2:-53524385 Msa0776060:CDS
GCAGTTGAGGTTGCAATCGC+TGG 0.425831 5_2:+53523293 None:intergenic
ATGAAGGGACTGTAGAGTTA+TGG 0.426761 5_2:-53529077 Msa0776060:CDS
TGAAGGGACTGTAGAGTTAT+GGG 0.430566 5_2:-53529076 Msa0776060:CDS
GATGCTAAAGTGTTTGTTGT+TGG 0.431020 5_2:-53524902 Msa0776060:CDS
CTAGTACTGGAGCTCCATTT+TGG 0.431384 5_2:-53523988 Msa0776060:CDS
ATACTACGCGCAGAAACATT+TGG 0.432473 5_2:-53523884 Msa0776060:CDS
TTAGGTGGGGAATGACCATC+TGG 0.432952 5_2:+53524483 None:intergenic
GTATGAAGGGATTTCCATCT+TGG 0.433617 5_2:+53522926 None:intergenic
GGCAGTTCCTCTTCCGCGAT+TGG 0.433711 5_2:-53524760 Msa0776060:CDS
GCAAATTGCTGTAGAAGCTT+GGG 0.434219 5_2:+53525856 None:intergenic
TTGGGCTCGATCAGAGTTTG+AGG 0.434776 5_2:-53524366 Msa0776060:CDS
AATAATATTAATGGTAACTT+AGG 0.438549 5_2:-53525904 Msa0776060:CDS
AGCAATTTGCCTTTGGTGCT+AGG 0.439721 5_2:-53525843 Msa0776060:CDS
ACTCTTGTCACTCTCGTTCA+CGG 0.440613 5_2:+53531033 None:intergenic
CAGCAACTGTGGACTTCGCC+TGG 0.443178 5_2:+53524729 None:intergenic
GCCTTAATGGGAGTTTCTTG+TGG 0.450723 5_2:-53524842 Msa0776060:CDS
GATGGAGAGGAACCACATAC+TGG 0.451260 5_2:-53526363 Msa0776060:CDS
TAAAAGACAATCCTACTCTC+AGG 0.451668 5_2:-53523088 Msa0776060:CDS
GAGCTTCAATATTTAGTTGA+GGG 0.452013 5_2:+53524684 None:intergenic
GGAGCGCGTTCTTGAATGCT+TGG 0.453147 5_2:-53524237 Msa0776060:CDS
CCGCGATTGGAATATTGGCC+AGG 0.453559 5_2:-53524747 Msa0776060:CDS
TCTTCCTCTGAACCAGCGAC+AGG 0.456232 5_2:+53525952 None:intergenic
TTAACCAATGTTTCTTGAGA+TGG 0.458620 5_2:-53522626 Msa0776060:three_prime_UTR
TCTGTAACCTTGCACGATGA+AGG 0.460758 5_2:-53529093 Msa0776060:CDS
GCATCTAGCATTCCAGGCTC+TGG 0.463774 5_2:-53526004 Msa0776060:CDS
CGAGGACTTGGTGCTGAGAT+TGG 0.465948 5_2:-53530830 Msa0776060:intron
GCCATGTTTGGTGGAATTGT+AGG 0.467732 5_2:-53525799 Msa0776060:CDS
GTTGTTGGATCTGGTGCACT+GGG 0.469083 5_2:-53524887 Msa0776060:CDS
TCCATCCGCTCTTTGTGCCT+AGG 0.470744 5_2:+53522981 None:intergenic
ATAGGCCGCTTCCCTGTCGC+TGG 0.470769 5_2:-53525964 Msa0776060:CDS
CGACGCCGCAATCAAATTCC+CGG 0.471003 5_2:+53530979 None:intergenic
GCAATTTGCCTTTGGTGCTA+GGG 0.471795 5_2:-53525842 Msa0776060:CDS
AAAGAGGGGCAGTGCTAAGT+TGG 0.472731 5_2:+53523187 None:intergenic
GAAACATGCTATTGAAAAGC+AGG 0.474711 5_2:+53523003 None:intergenic
GGAAATAAATGGATACTTGA+GGG 0.475547 5_2:+53522844 None:intergenic
GAGGAGAACTGCAGTGGACG+AGG 0.475825 5_2:+53523947 None:intergenic
TATACCTTCTCAAACTGGAT+TGG 0.476277 5_2:+53523638 None:intergenic
GAGGATGCTGCAACTAGTAC+TGG 0.479266 5_2:-53524001 Msa0776060:CDS
GGCTTCTGTCAGTAAGCTGC+AGG 0.481238 5_2:-53528998 Msa0776060:CDS
TTGATGAGGATCTGCATAGC+AGG 0.483115 5_2:-53530922 Msa0776060:CDS
TTTGAACTTCAAACCTCTAA+GGG 0.484104 5_2:-53526094 Msa0776060:CDS
ATTGGCTTCATCCTGAATCC+TGG 0.486817 5_2:+53523656 None:intergenic
ATCAGAAACTGGAGATGACT+TGG 0.488848 5_2:+53523917 None:intergenic
ATTAGTATATTCACTTGGGT+TGG 0.489419 5_2:+53524301 None:intergenic
CGACTTAGGTTCAGTTAAGA+AGG 0.489527 5_2:-53531074 Msa0776060:CDS
TAACTTAGGTGATGGAAGGT+TGG 0.489560 5_2:-53525890 Msa0776060:CDS
CACAGAAGCAGTAGAGAGAC+TGG 0.489594 5_2:+53523742 None:intergenic
AGTGGACGAGGGAATCGTTT+CGG 0.490364 5_2:+53523959 None:intergenic
TCAAGCATCAAGATTTGAGT+TGG 0.490518 5_2:-53523133 Msa0776060:CDS
CAGTCTCTCTACTGCTTCTG+TGG 0.491243 5_2:-53523741 Msa0776060:CDS
GGAGTTTCTTGTGGAGGTCA+AGG 0.491274 5_2:-53524833 Msa0776060:CDS
CCCCACCTAACAGAAAACTA+TGG 0.494247 5_2:-53524470 Msa0776060:CDS
AGCAAGGGATATTGCCAAGA+TGG 0.494470 5_2:-53522940 Msa0776060:CDS
AAATGAACTTATCCAGAGCC+TGG 0.494765 5_2:+53525992 None:intergenic
TGATGATACAAATTACCATA+TGG 0.495122 5_2:-53523411 Msa0776060:CDS
CAATATTCCAATCGCGGAAG+AGG 0.497085 5_2:+53524753 None:intergenic
TAGAGAAGAGTAACTTAAGC+AGG 0.497531 5_2:-53524781 Msa0776060:CDS
TGGGCTCGATCAGAGTTTGA+GGG 0.498287 5_2:-53524365 Msa0776060:CDS
TGGAATGCTAGATGCAGTAT+AGG 0.501295 5_2:+53526012 None:intergenic
CCACCAAACATGGCAGCCAT+AGG 0.502484 5_2:+53525808 None:intergenic
TGTTTCTGCGCGTAGTATAG+AGG 0.504143 5_2:+53523889 None:intergenic
CTTCCCTGTCGCTGGTTCAG+AGG 0.504803 5_2:-53525956 Msa0776060:CDS
GTACTAGTTGCAGCATCCTC+AGG 0.507340 5_2:+53524004 None:intergenic
GAAGAATGCTGGTGATGCTC+AGG 0.507521 5_2:-53524273 Msa0776060:CDS
TGGCTCAGCCATGGAAAAGA+GGG 0.508402 5_2:+53523172 None:intergenic
AGAGTTCCAGATTCAAGAAG+TGG 0.510671 5_2:+53524524 None:intergenic
ACCTCAACTGCTATGGCCAC+TGG 0.513534 5_2:-53523281 Msa0776060:CDS
ACATCGGTGCTTGTTTCTCA+GGG 0.514906 5_2:+53524432 None:intergenic
ATTAATGGTAACTTAGGTGA+TGG 0.515018 5_2:-53525898 Msa0776060:CDS
AATCTGGAAACGTACCGATA+AGG 0.515168 5_2:+53531355 None:intergenic
GGCTGAGCCAGTTCCGGCAA+AGG 0.516192 5_2:-53523159 Msa0776060:CDS
CCTATGGCTGCCATGTTTGG+TGG 0.517240 5_2:-53525808 Msa0776060:CDS
TTTAAATCATTAGGATGCAA+TGG 0.518509 5_2:+53524992 None:intergenic
AACAACAGCAACAGCGACTT+AGG 0.521780 5_2:-53531088 Msa0776060:CDS
AAGATTGTATTACTTGGGCC+AGG 0.522160 5_2:-53524190 Msa0776060:CDS
CTGGCTCAGCCATGGAAAAG+AGG 0.523182 5_2:+53523171 None:intergenic
TCGCTAAGAAGAAATTCGCC+TGG 0.524799 5_2:+53526057 None:intergenic
CATTGACCACTGCTTGACTT+GGG 0.525222 5_2:-53524384 Msa0776060:CDS
TCTATGTGACGACGGTATGA+AGG 0.525866 5_2:+53522912 None:intergenic
TTTACTGTTGTTGATGTCGA+TGG 0.525947 5_2:-53526381 Msa0776060:CDS
AGCAGGGTTGTCATTGCTGA+TGG 0.527621 5_2:+53526329 None:intergenic
GGCGATAACAATAACAGTAC+CGG 0.527820 5_2:-53530998 Msa0776060:CDS
ACTGTGTAAAGAGTGTAATA+GGG 0.527862 5_2:+53531449 None:intergenic
AGGGAAGCACTCAATGATCC+AGG 0.528850 5_2:-53526075 Msa0776060:CDS
TGGTATCCCTACCCCTGACT+GGG 0.529089 5_2:-53523864 Msa0776060:CDS
TTTACAAAGCTTTGGATGGA+GGG 0.529528 5_2:-53523241 Msa0776060:CDS
GAGGTTGTCAAAGCATGCTC+TGG 0.532959 5_2:-53525772 Msa0776060:CDS
GACGCAATTATTCCAGTATG+TGG 0.534184 5_2:+53526351 None:intergenic
GTTGTTGTGGCTTGTGAGGA+TGG 0.534337 5_2:-53522888 Msa0776060:CDS
GCCCAGCTATCACATCCATA+TGG 0.534592 5_2:+53523396 None:intergenic
CGGAAATAAATGGATACTTG+AGG 0.538825 5_2:+53522843 None:intergenic
GGCAGCTTGCTGTGTATGGT+AGG 0.539353 5_2:-53530901 Msa0776060:CDS
ATGTTTGTCGCCGTGCCTGA+AGG 0.541290 5_2:+53522732 None:intergenic
GCCAGTGGCCATAGCAGTTG+AGG 0.541357 5_2:+53523280 None:intergenic
ACCTGACTTTCAGCCAAAGA+AGG 0.541490 5_2:-53523795 Msa0776060:CDS
ACCATATGGATGTGATAGCT+GGG 0.544118 5_2:-53523397 Msa0776060:CDS
TGAAGGCCAAGTTTATTGCT+GGG 0.544977 5_2:-53523325 Msa0776060:CDS
ACCGATAAGGAAGAAAAGAA+TGG 0.545196 5_2:+53531368 None:intergenic
AGCACCAAGTCCTCGCATCC+CGG 0.545712 5_2:+53530838 None:intergenic
TTCACCATCTCAAGAAACAT+TGG 0.546066 5_2:+53522622 None:intergenic
CTGAACCAGCGACAGGGAAG+CGG 0.548168 5_2:+53525959 None:intergenic
ATTCGTAGTGCCTTCAGGCA+CGG 0.549689 5_2:-53522742 Msa0776060:three_prime_UTR
CGTTCTTGAATGCTTGGACA+AGG 0.549794 5_2:-53524231 Msa0776060:CDS
TTAATGGGAGTTTCTTGTGG+AGG 0.551450 5_2:-53524839 Msa0776060:CDS
TAGCATTAGTATATTCACTT+GGG 0.551858 5_2:+53524297 None:intergenic
TGCCGGAACTGGCTCAGCCA+TGG 0.552669 5_2:+53523163 None:intergenic
GATCCGCCCAGCAATAAACT+TGG 0.553499 5_2:+53523319 None:intergenic
AATGCTTATAGTATTTCTTG+TGG 0.555880 5_2:-53523032 Msa0776060:CDS
CTGTAACCTTGCACGATGAA+GGG 0.556726 5_2:-53529092 Msa0776060:CDS
TTAGGATGCAATGGTTCTGT+AGG 0.556914 5_2:+53525001 None:intergenic
TCCTACAATTCCACCAAACA+TGG 0.558580 5_2:+53525798 None:intergenic
ATAGCATTAGTATATTCACT+TGG 0.558848 5_2:+53524296 None:intergenic
CACCAAACATGGCAGCCATA+GGG 0.558852 5_2:+53525809 None:intergenic
TACAGTCCCTTCATCGTGCA+AGG 0.559502 5_2:+53529086 None:intergenic
AGCAGCTGTTGCAGCAACTG+TGG 0.560281 5_2:+53524718 None:intergenic
GATTGCAACCTCAACTGCTA+TGG 0.560816 5_2:-53523288 Msa0776060:CDS
GACAAGAGTTTCAGTAGCAG+CGG 0.564489 5_2:-53531019 Msa0776060:CDS
GGAGCTTCTTGATTGGCTGA+AGG 0.564907 5_2:-53523066 Msa0776060:CDS
ATGCTGGTGATGCTCAGGCA+AGG 0.566372 5_2:-53524268 Msa0776060:CDS
CACACAGGCCAAACAACCAC+AGG 0.568307 5_2:-53526118 Msa0776060:CDS
CAATACTGCCCTAGCACCAA+AGG 0.568311 5_2:+53525834 None:intergenic
ATGGTAACTTAGGTGATGGA+AGG 0.570275 5_2:-53525894 Msa0776060:CDS
TCAACACAAGAAACTAGAGC+AGG 0.571288 5_2:+53526312 None:intergenic
ATATCAAATACCTGAAACAG+TGG 0.571836 5_2:+53525739 None:intergenic
TTTGAGTTGAAAAGCAACTT+CGG 0.575453 5_2:-53522688 Msa0776060:three_prime_UTR
AGAGCTTCAATATTTAGTTG+AGG 0.576311 5_2:+53524683 None:intergenic
TGCTGGTGATGCTCAGGCAA+GGG 0.576855 5_2:-53524267 Msa0776060:CDS
CTGGAGATGACTTGGATCAG+AGG 0.578510 5_2:+53523925 None:intergenic
GAGTTTCTTGTGGAGGTCAA+GGG 0.579278 5_2:-53524832 Msa0776060:CDS
GTTGGACTGTGTGGGACAGA+TGG 0.581420 5_2:-53523115 Msa0776060:CDS
ACTAATGCTATGAAGAATGC+TGG 0.581995 5_2:-53524284 Msa0776060:CDS
CTATGTGACGACGGTATGAA+GGG 0.583308 5_2:+53522913 None:intergenic
AGAAAAGAATGGAATCTGAT+CGG 0.584405 5_2:+53531379 None:intergenic
CAAGCAAACATACTTAAGCC+TGG 0.586501 5_2:+53524172 None:intergenic
AAAAGACAATCCTACTCTCA+GGG 0.588461 5_2:-53523087 Msa0776060:CDS
ATCGGTGCTTGTTTCTCAGG+GGG 0.588590 5_2:+53524434 None:intergenic
GTTCTTGTTTCCGGGATGCG+AGG 0.588608 5_2:-53530848 Msa0776060:CDS
AAGTCATCTCCAGTTTCTGA+TGG 0.589571 5_2:-53523915 Msa0776060:CDS
TCCTAGGCACAAAGAGCGGA+TGG 0.590716 5_2:-53522982 Msa0776060:CDS
AAAAGTTGTAGATTTAGCAA+GGG 0.591947 5_2:-53522955 Msa0776060:CDS
GAGAGACTTGAGTTTCAGGA+TGG 0.593512 5_2:-53526285 Msa0776060:CDS
AATGCTAGATGCAGTATAGG+TGG 0.593682 5_2:+53526015 None:intergenic
TGGTGGAATTGTAGGACAAG+AGG 0.596531 5_2:-53525791 Msa0776060:CDS
GCAGCTTGCTGTGTATGGTA+GGG 0.598555 5_2:-53530900 Msa0776060:CDS
TCGTCACATAGATGTTGTTG+TGG 0.599771 5_2:-53522901 Msa0776060:CDS
TTGTCAAGTTAGAGAGATTG+CGG 0.600901 5_2:-53523691 Msa0776060:CDS
AGCTAAATGCAATACCCAGA+TGG 0.602057 5_2:-53524498 Msa0776060:CDS
AACTCAAATATGAACTGAGA+CGG 0.604273 5_2:+53522703 None:intergenic
TCAAGAAGCTCCCTGAGAGT+AGG 0.607687 5_2:+53523077 None:intergenic
TAGGGCAGTATTGAACCCTA+TGG 0.608225 5_2:-53525824 Msa0776060:CDS
TGTATGGTAGGGAGACTATG+AGG 0.608486 5_2:-53530889 Msa0776060:CDS
GGTTTGAAGTTCAAAACCTG+TGG 0.610538 5_2:+53526102 None:intergenic
TTGCGGTCAAATCTGCCACC+AGG 0.610874 5_2:-53523674 Msa0776060:CDS
AGATGTTGTTGTGGCTTGTG+AGG 0.611793 5_2:-53522892 Msa0776060:CDS
TCCTGAAGTTGACAAGCTGA+AGG 0.613866 5_2:-53523342 Msa0776060:CDS
GGTATGAAAGAGTTGAATGA+CGG 0.614542 5_2:-53526234 Msa0776060:CDS
ATGCTAGATGCAGTATAGGT+GGG 0.614835 5_2:+53526016 None:intergenic
CTTCCTCTGAACCAGCGACA+GGG 0.621319 5_2:+53525953 None:intergenic
GGCTTCATCCTGAATCCTGG+TGG 0.624334 5_2:+53523659 None:intergenic
GGGCAGTGCTAAGTTGGCAA+AGG 0.624434 5_2:+53523193 None:intergenic
GTAATTGCGTGCTCTCATGT+TGG 0.625010 5_2:+53523370 None:intergenic
TCAGAGGAGGAGAACTGCAG+TGG 0.627364 5_2:+53523941 None:intergenic
AGGAGAACTGCAGTGGACGA+GGG 0.632625 5_2:+53523948 None:intergenic
GCGATAACAATAACAGTACC+GGG 0.633248 5_2:-53530997 Msa0776060:CDS
GGATGGAGGGCACAAACTCG+AGG 0.634174 5_2:-53523228 Msa0776060:CDS
AGATTTGAGTTGGACTGTGT+GGG 0.634277 5_2:-53523123 Msa0776060:CDS
AAGATTTGAGTTGGACTGTG+TGG 0.635207 5_2:-53523124 Msa0776060:CDS
TAGGTTCAGTTAAGAAGGTG+CGG 0.635807 5_2:-53531069 Msa0776060:CDS
ATCGAGCCCAAGTCAAGCAG+TGG 0.639227 5_2:+53524378 None:intergenic
GAAGCCAATCCAGTTTGAGA+AGG 0.640400 5_2:-53523642 Msa0776060:intron
AAAAGGTGGTATTGTCACAC+AGG 0.640867 5_2:-53526133 Msa0776060:CDS
TATAAGCTAACTGCTTCACT+CGG 0.644091 5_2:+53524032 None:intergenic
CAGTACCGGGAATTTGATTG+CGG 0.646358 5_2:-53530984 Msa0776060:CDS
CATCGGTGCTTGTTTCTCAG+GGG 0.650793 5_2:+53524433 None:intergenic
TTTCAGTTTCAGAGCTAACA+CGG 0.652120 5_2:+53524654 None:intergenic
ATTGTATGAAAACAGCTCAA+CGG 0.653359 5_2:+53522823 None:intergenic
AGGCCCAAAATCACAAAACA+CGG 0.655204 5_2:+53526407 None:intergenic
GAGATGACTTGGATCAGAGG+AGG 0.659455 5_2:+53523928 None:intergenic
TCAGTTAAGAAGGTGCGGAA+CGG 0.660213 5_2:-53531064 Msa0776060:CDS
AATTAGATCATCAATAACAA+CGG 0.661611 5_2:+53523712 None:intergenic
CAACAACATCTATGTGACGA+CGG 0.662935 5_2:+53522904 None:intergenic
TGTGAATGCAAGACTATACG+TGG 0.663201 5_2:-53524573 Msa0776060:CDS
TGTAAAACTCCAGACAGACA+AGG 0.667725 5_2:+53523258 None:intergenic
CCTGGCCAATATTCCAATCG+CGG 0.671183 5_2:+53524747 None:intergenic
ACATCAACAACAGTAAACTC+AGG 0.672812 5_2:+53526387 None:intergenic
AAGCAGTGGTCAATGTTGTG+TGG 0.675358 5_2:+53524392 None:intergenic
CAACACAAGAAACTAGAGCA+GGG 0.678685 5_2:+53526313 None:intergenic
TGTTTCCTAGGCACAAAGAG+CGG 0.681256 5_2:-53522986 Msa0776060:CDS
TAACTCGCAGGAGATTGATG+AGG 0.683174 5_2:-53530936 Msa0776060:CDS
GGCTCAGCCATGGAAAAGAG+GGG 0.684630 5_2:+53523173 None:intergenic
TAGGTGGGGAATGACCATCT+GGG 0.685278 5_2:+53524484 None:intergenic
CTCCAGACAGACAAGGCCAG+TGG 0.687437 5_2:+53523265 None:intergenic
TGTTGTTGATGTCGATGGAG+AGG 0.689967 5_2:-53526376 Msa0776060:CDS
CTTGGACAAGGAGAAGTGCG+AGG 0.698953 5_2:-53524219 Msa0776060:CDS
CTAGATGCAGTATAGGTGGG+CGG 0.702481 5_2:+53526019 None:intergenic
AGGCCAAGTTTATTGCTGGG+CGG 0.703125 5_2:-53523322 Msa0776060:CDS
AATGAATGAACAGTACACAT+CGG 0.735870 5_2:+53524416 None:intergenic
ATGGTAGGGAGACTATGAGG+AGG 0.751101 5_2:-53530886 Msa0776060:CDS
CAATTGGAGGCTGATGACTG+TGG 0.779791 5_2:+53526466 None:intergenic
GAACTTCAGAGAATACAACA+AGG 0.787948 5_2:+53526259 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATGATTTTAAATTGAAT+GGG + chr5_2:53524803-53524822 None:intergenic 10.0%
!!! ATTAATGATTTTAAATTGAA+TGG + chr5_2:53524804-53524823 None:intergenic 10.0%
!!! ATTATTAACTTTCTTTTTTT+AGG - chr5_2:53526226-53526245 Msa0776060:CDS 10.0%
!!! TGTTTTTTTGATATTATTGA+TGG - chr5_2:53522848-53522867 Msa0776060:CDS 15.0%
!!! TTTTCCTAATTAAAATAACA+AGG - chr5_2:53523476-53523495 Msa0776060:intron 15.0%
!! TTTCCTAATTAAAATAACAA+GGG - chr5_2:53523477-53523496 Msa0776060:intron 15.0%
!! AACACATTTATTAGTAAAAA+AGG + chr5_2:53523643-53523662 None:intergenic 15.0%
!!! TTTTTTTCAATTAAATTAGC+AGG - chr5_2:53523859-53523878 Msa0776060:CDS 15.0%
!!! TTTTTTCAATTAAATTAGCA+GGG - chr5_2:53523860-53523879 Msa0776060:CDS 15.0%
!!! TATTTGAAATTATTGAATGA+AGG - chr5_2:53525983-53526002 Msa0776060:CDS 15.0%
!! TGTTTACATTATTAAAATCA+TGG - chr5_2:53526089-53526108 Msa0776060:CDS 15.0%
!! TATAACTAATCATAATAAGA+TGG - chr5_2:53526116-53526135 Msa0776060:CDS 15.0%
!! ATAACTAATCATAATAAGAT+GGG - chr5_2:53526117-53526136 Msa0776060:CDS 15.0%
!!! GTTTTAGGTTTATATTAAAT+TGG - chr5_2:53526391-53526410 Msa0776060:CDS 15.0%
!! ATTCAATGATTAGTAATAAT+AGG + chr5_2:53526619-53526638 None:intergenic 15.0%
!! ATTATTACTAATCATTGAAT+TGG - chr5_2:53526619-53526638 Msa0776060:intron 15.0%
!! TAAAGAAAAATAATTGGTAA+TGG + chr5_2:53526685-53526704 None:intergenic 15.0%
!! AGCAATTAAAGAAAAATAAT+TGG + chr5_2:53526691-53526710 None:intergenic 15.0%
!!! ATTATTTTTCTTTAATTGCT+CGG - chr5_2:53526691-53526710 Msa0776060:intron 15.0%
!!! TAGAGTAATATTTTAGTTAT+TGG - chr5_2:53526839-53526858 Msa0776060:intron 15.0%
!!! TTCTTCTTTTAAAAATGTTT+GGG + chr5_2:53526914-53526933 None:intergenic 15.0%
!!! ATTCTTCTTTTAAAAATGTT+TGG + chr5_2:53526915-53526934 None:intergenic 15.0%
!! AAATGTTATCTACAATATAT+TGG + chr5_2:53526979-53526998 None:intergenic 15.0%
!! TAAGTTACCATTAATATTAT+TGG + chr5_2:53528154-53528173 None:intergenic 15.0%
!! AATAATATTAATGGTAACTT+AGG - chr5_2:53528153-53528172 Msa0776060:intron 15.0%
!!! TCTTTTGTATAAATAATTCT+TGG - chr5_2:53528522-53528541 Msa0776060:intron 15.0%
!!! CTTTTGTATAAATAATTCTT+GGG - chr5_2:53528523-53528542 Msa0776060:intron 15.0%
!!! TTTATTGGTTTTAAATCATT+AGG + chr5_2:53529077-53529096 None:intergenic 15.0%
!! TTATTTATATTAATTCTTGC+CGG - chr5_2:53529920-53529939 Msa0776060:intron 15.0%
!! ATACAATTACAAAAAAGAAA+GGG + chr5_2:53530493-53530512 None:intergenic 15.0%
!! AATACAATTACAAAAAAGAA+AGG + chr5_2:53530494-53530513 None:intergenic 15.0%
!!! TTTTTTGTAATTGTATTTGT+TGG - chr5_2:53530497-53530516 Msa0776060:intron 15.0%
!!! TTACCCTTGTTATTTTAATT+AGG + chr5_2:53523483-53523502 None:intergenic 20.0%
!!! TTTCTTGATTTGATAGATTT+AGG - chr5_2:53523670-53523689 Msa0776060:CDS 20.0%
!! ATAAGCTTATATGACTAAAA+TGG + chr5_2:53524003-53524022 None:intergenic 20.0%
!!! TTTTATTTGCTTTTCAAGAT+AGG - chr5_2:53524095-53524114 Msa0776060:intron 20.0%
!!! TTTATTTGCTTTTCAAGATA+GGG - chr5_2:53524096-53524115 Msa0776060:intron 20.0%
!! TGATAAACAATAGCAATTAA+AGG - chr5_2:53524128-53524147 Msa0776060:intron 20.0%
!! GATAAACAATAGCAATTAAA+GGG - chr5_2:53524129-53524148 Msa0776060:intron 20.0%
!!! CAAGTATTTATTTTAGTGTT+TGG - chr5_2:53524198-53524217 Msa0776060:CDS 20.0%
!!! TAGTGTTTGGTTTTAATATA+CGG - chr5_2:53524211-53524230 Msa0776060:CDS 20.0%
!! TAAGTATTTATGTTAGTGTT+TGG - chr5_2:53524295-53524314 Msa0776060:CDS 20.0%
!! ATAAGTAATAAGCTATTCTA+AGG + chr5_2:53524414-53524433 None:intergenic 20.0%
!! ATACACAATCACTTTATATA+TGG + chr5_2:53525212-53525231 None:intergenic 20.0%
!! ATATATAAAGTGATTGTGTA+TGG - chr5_2:53525211-53525230 Msa0776060:intron 20.0%
!!! AGTTTGTCATTTCAATATTA+AGG + chr5_2:53525267-53525286 None:intergenic 20.0%
!!! TTTTAATCATTATAATAGCC+AGG + chr5_2:53525382-53525401 None:intergenic 20.0%
!!! ATCTTATTTCATTTTCACAA+TGG + chr5_2:53525414-53525433 None:intergenic 20.0%
!! GTGAAAATGAAATAAGATTA+TGG - chr5_2:53525416-53525435 Msa0776060:intron 20.0%
!! AAAATGAAATAAGATTATGG+AGG - chr5_2:53525419-53525438 Msa0776060:intron 20.0%
!! TAATAGGTGATTAATGTTTA+TGG - chr5_2:53526019-53526038 Msa0776060:CDS 20.0%
!!! ACTTTCTTTTTTTAGGAATA+TGG - chr5_2:53526233-53526252 Msa0776060:CDS 20.0%
!!! TTTAGAATTAGAATAGACAA+TGG + chr5_2:53526451-53526470 None:intergenic 20.0%
!! AAGTTTCTCTTGTAAATAAT+GGG + chr5_2:53526592-53526611 None:intergenic 20.0%
!!! AATATTTTAGTTATTGGTCT+TGG - chr5_2:53526845-53526864 Msa0776060:intron 20.0%
!!! ATATTTTAGTTATTGGTCTT+GGG - chr5_2:53526846-53526865 Msa0776060:intron 20.0%
!!! GTATGTAATGTTAAAGTTTT+TGG - chr5_2:53527063-53527082 Msa0776060:intron 20.0%
!! AGTATATGTATGTAATGTTA+AGG - chr5_2:53527166-53527185 Msa0776060:intron 20.0%
!!! TTTTATTATAACTGTCTTGT+AGG - chr5_2:53527513-53527532 Msa0776060:intron 20.0%
!!! TCAGTTTTAATAAAAGCAAT+TGG + chr5_2:53527610-53527629 None:intergenic 20.0%
!! TTTATTAAAACTGAAGTTAG+AGG - chr5_2:53527616-53527635 Msa0776060:intron 20.0%
!!! CTCTTGTATTTTGAAATATT+GGG - chr5_2:53528361-53528380 Msa0776060:intron 20.0%
!! ATACAACTTATATCTGATAT+TGG - chr5_2:53528563-53528582 Msa0776060:intron 20.0%
!! TTGATCATCATTTAAATGTT+TGG - chr5_2:53528666-53528685 Msa0776060:intron 20.0%
!! AAGATATACTTGGATTAATA+TGG - chr5_2:53528828-53528847 Msa0776060:intron 20.0%
!!! TTTTGAAGATTGTATTACTT+GGG - chr5_2:53529862-53529881 Msa0776060:intron 20.0%
!! AATTAGATCATCAATAACAA+CGG + chr5_2:53530348-53530367 None:intergenic 20.0%
! CTGATAACATAGTTTATACT+GGG - chr5_2:53523334-53523353 Msa0776060:CDS 25.0%
!! TGCTTTAGTGTTATTGTTTA+GGG - chr5_2:53523578-53523597 Msa0776060:intron 25.0%
!!! TGATAGATTTAGGCTTTATT+TGG - chr5_2:53523680-53523699 Msa0776060:CDS 25.0%
!!! GATAGATTTAGGCTTTATTT+GGG - chr5_2:53523681-53523700 Msa0776060:CDS 25.0%
!! CTTTATTTGGTAAGAAATAG+CGG - chr5_2:53523727-53523746 Msa0776060:CDS 25.0%
! AGCTAATTTAAGTAGCTTAT+AGG + chr5_2:53523909-53523928 None:intergenic 25.0%
! ATAATCTCATGAGAAAATGA+AGG - chr5_2:53523964-53523983 Msa0776060:CDS 25.0%
!!! TGGTTTTAATATACGGAATT+TGG - chr5_2:53524218-53524237 Msa0776060:CDS 25.0%
! ATTTATGTTAGTGTTTGGTT+TGG - chr5_2:53524300-53524319 Msa0776060:CDS 25.0%
!! AATATTTTCAACAAACGAAG+AGG - chr5_2:53524505-53524524 Msa0776060:CDS 25.0%
! AGCTTATTACAATAAGCTAT+CGG - chr5_2:53524556-53524575 Msa0776060:CDS 25.0%
!! GATTTTATTAAGGTAGCATT+CGG + chr5_2:53524662-53524681 None:intergenic 25.0%
!!! TCATTTTTGGAATTAGGATT+GGG + chr5_2:53524761-53524780 None:intergenic 25.0%
!!! ATCATTTTTGGAATTAGGAT+TGG + chr5_2:53524762-53524781 None:intergenic 25.0%
!!! CCTTTATCATTTTTGGAATT+AGG + chr5_2:53524767-53524786 None:intergenic 25.0%
! CCTAATTCCAAAAATGATAA+AGG - chr5_2:53524764-53524783 Msa0776060:CDS 25.0%
!! GTTAGTACCTTTATCATTTT+TGG + chr5_2:53524774-53524793 None:intergenic 25.0%
! AATCATTAATTGAGAGATCT+TGG - chr5_2:53524814-53524833 Msa0776060:CDS 25.0%
! AAAATGATCTTGGTAAAAAC+AGG - chr5_2:53525031-53525050 Msa0776060:CDS 25.0%
! AAATGATCTTGGTAAAAACA+GGG - chr5_2:53525032-53525051 Msa0776060:CDS 25.0%
! GAAATTAGAAAGTTGTTCTT+TGG + chr5_2:53525130-53525149 None:intergenic 25.0%
! ACATATGCTACACTATTTAA+TGG - chr5_2:53525337-53525356 Msa0776060:intron 25.0%
! CTAACATATTTCTCTCTATT+TGG - chr5_2:53525485-53525504 Msa0776060:intron 25.0%
!! TCTATTTGGTTTACATTTCT+GGG - chr5_2:53525499-53525518 Msa0776060:intron 25.0%
! TATCATAGATTCATAGTACA+CGG + chr5_2:53525555-53525574 None:intergenic 25.0%
! TATGAATCTATGATAAAGTG+AGG - chr5_2:53525560-53525579 Msa0776060:intron 25.0%
! TACTATTATCTGTAAAGACA+CGG - chr5_2:53525758-53525777 Msa0776060:CDS 25.0%
! TCAAATTCCAAACTAAATAC+AGG + chr5_2:53525885-53525904 None:intergenic 25.0%
!!! TGTATTTAGTTTGGAATTTG+AGG - chr5_2:53525884-53525903 Msa0776060:CDS 25.0%
! TGTGCATTAATTATGTAGAA+TGG - chr5_2:53525944-53525963 Msa0776060:CDS 25.0%
! GTGCATTAATTATGTAGAAT+GGG - chr5_2:53525945-53525964 Msa0776060:CDS 25.0%
!! GTTTATGGAAGTCATTATTT+TGG - chr5_2:53526034-53526053 Msa0776060:CDS 25.0%
! AAGTACTAGATTAATAATGG+TGG + chr5_2:53526316-53526335 None:intergenic 25.0%
! CTCAAGTACTAGATTAATAA+TGG + chr5_2:53526319-53526338 None:intergenic 25.0%
!!! ATATTTTAGCTCTTGGTTTT+AGG - chr5_2:53526376-53526395 Msa0776060:CDS 25.0%
!! GTTTACTGAAGTCATTATTT+TGG - chr5_2:53526422-53526441 Msa0776060:CDS 25.0%
! GAAGTTTCTCTTGTAAATAA+TGG + chr5_2:53526593-53526612 None:intergenic 25.0%
!!! AATTGGTAACTTTTGTTCTT+AGG - chr5_2:53526636-53526655 Msa0776060:intron 25.0%
! CTCAAGTACTAGATTAATAA+GGG + chr5_2:53526319-53526338 None:intergenic 25.0%
! TTGATGTGATATTAGATGTT+AGG - chr5_2:53527201-53527220 Msa0776060:intron 25.0%
! TATAATTGGTAGAAATGTGA+AGG - chr5_2:53527339-53527358 Msa0776060:intron 25.0%
! ATAATTGGTAGAAATGTGAA+GGG - chr5_2:53527340-53527359 Msa0776060:intron 25.0%
! TCAAATAAGTCAGAAACAAA+TGG + chr5_2:53527479-53527498 None:intergenic 25.0%
!!! GTTTTAATAAAAGCAATTGG+AGG + chr5_2:53527607-53527626 None:intergenic 25.0%
!! CTAGCATTTTTAATCTTTCT+TGG + chr5_2:53527853-53527872 None:intergenic 25.0%
! TCTATCGCCAATAATATTAA+TGG - chr5_2:53528144-53528163 Msa0776060:intron 25.0%
! TCAAAATACAAGAGGATATA+AGG + chr5_2:53528355-53528374 None:intergenic 25.0%
! CCAATATTTCAAAATACAAG+AGG + chr5_2:53528363-53528382 None:intergenic 25.0%
!!! CCTCTTGTATTTTGAAATAT+TGG - chr5_2:53528360-53528379 Msa0776060:intron 25.0%
! ACCAAATTTCACTTATTATG+AGG + chr5_2:53528645-53528664 None:intergenic 25.0%
! TCATTTAAATGTTTGGATTC+TGG - chr5_2:53528673-53528692 Msa0776060:intron 25.0%
! GAAAACCATGGATATTATAA+AGG + chr5_2:53528703-53528722 None:intergenic 25.0%
! AAACAGTTCAAAGATATACT+TGG - chr5_2:53528818-53528837 Msa0776060:intron 25.0%
! TATAAAAATACCTAGTCTGT+TGG - chr5_2:53528862-53528881 Msa0776060:intron 25.0%
!!! TAACTTCTTTTTTCTTCTTG+CGG - chr5_2:53528900-53528919 Msa0776060:intron 25.0%
!! ATGCAAGGTATTATAATTTC+CGG + chr5_2:53528945-53528964 None:intergenic 25.0%
! TTTAAATCATTAGGATGCAA+TGG + chr5_2:53529068-53529087 None:intergenic 25.0%
! TTTAAAGAATCTTGCCTTAA+TGG - chr5_2:53529202-53529221 Msa0776060:intron 25.0%
! TTAAAGAATCTTGCCTTAAT+GGG - chr5_2:53529203-53529222 Msa0776060:intron 25.0%
! TAGCATTAGTATATTCACTT+GGG + chr5_2:53529763-53529782 None:intergenic 25.0%
! ATAGCATTAGTATATTCACT+TGG + chr5_2:53529764-53529783 None:intergenic 25.0%
!!! CTTTTGAAGATTGTATTACT+TGG - chr5_2:53529861-53529880 Msa0776060:intron 25.0%
! CAGATAAAACTAATATACAC+CGG + chr5_2:53529942-53529961 None:intergenic 25.0%
! AAAAATATACCTTCTCAAAC+TGG + chr5_2:53530427-53530446 None:intergenic 25.0%
!! TTGGTTTCAATAAGCAATTT+TGG - chr5_2:53530516-53530535 Msa0776060:intron 25.0%
! AATTTCTACCTAAAAATTGC+AGG - chr5_2:53530622-53530641 Msa0776060:intron 25.0%
! TGATGATACAAATTACCATA+TGG - chr5_2:53530646-53530665 Msa0776060:intron 25.0%
! AATGCTTATAGTATTTCTTG+TGG - chr5_2:53531025-53531044 Msa0776060:CDS 25.0%
! AAAAAGTTGTAGATTTAGCA+AGG - chr5_2:53531101-53531120 Msa0776060:CDS 25.0%
! AAAAGTTGTAGATTTAGCAA+GGG - chr5_2:53531102-53531121 Msa0776060:CDS 25.0%
!! TAATAGGGTTTGGTTTGATT+TGG + chr5_2:53522596-53522615 None:intergenic 30.0%
! ACTGTGTAAAGAGTGTAATA+GGG + chr5_2:53522611-53522630 None:intergenic 30.0%
! AACTGTGTAAAGAGTGTAAT+AGG + chr5_2:53522612-53522631 None:intergenic 30.0%
! CGTATTCTTTTTCTTTCGTT+CGG + chr5_2:53522640-53522659 None:intergenic 30.0%
AGAAAAGAATGGAATCTGAT+CGG + chr5_2:53522681-53522700 None:intergenic 30.0%
! TCCATTCTTTTCTTCCTTAT+CGG - chr5_2:53522688-53522707 Msa0776060:three_prime_UTR 30.0%
ATCTTCTTCCTATGTTTCTT+AGG - chr5_2:53522729-53522748 Msa0776060:three_prime_UTR 30.0%
TCTTCTTCCTATGTTTCTTA+GGG - chr5_2:53522730-53522749 Msa0776060:three_prime_UTR 30.0%
TGAAAAACCCTAAGAAACAT+AGG + chr5_2:53522740-53522759 None:intergenic 30.0%
!!! ATTTTATCGATTCGCTTCTT+AGG - chr5_2:53522760-53522779 Msa0776060:three_prime_UTR 30.0%
!!! TTTTATCGATTCGCTTCTTA+GGG - chr5_2:53522761-53522780 Msa0776060:three_prime_UTR 30.0%
GCTGATAACATAGTTTATAC+TGG - chr5_2:53523333-53523352 Msa0776060:CDS 30.0%
! GTGCTTTAGTGTTATTGTTT+AGG - chr5_2:53523577-53523596 Msa0776060:intron 30.0%
! GCTTTAGTGTTATTGTTTAG+GGG - chr5_2:53523579-53523598 Msa0776060:intron 30.0%
! CTTTATTTGGGAAGAAATAG+CGG - chr5_2:53523693-53523712 Msa0776060:CDS 30.0%
!! AAGAAATAGCGGATAGATTT+AGG - chr5_2:53523704-53523723 Msa0776060:CDS 30.0%
!! GGATAGATTTAGGCTTTATT+TGG - chr5_2:53523714-53523733 Msa0776060:CDS 30.0%
GCAGTGTTTGATGAAATTAA+CGG - chr5_2:53523776-53523795 Msa0776060:CDS 30.0%
ATGACTAAAATGGACATGTT+TGG + chr5_2:53523993-53524012 None:intergenic 30.0%
TAAAAATGAATCATGCCTAG+TGG + chr5_2:53524080-53524099 None:intergenic 30.0%
!! CAATTAAAGGGCATTTGAAA+GGG - chr5_2:53524141-53524160 Msa0776060:intron 30.0%
CATTTGAAAGGGAAACTTAT+TGG - chr5_2:53524152-53524171 Msa0776060:intron 30.0%
TCTATAACCATAGAGATCTA+GGG + chr5_2:53524699-53524718 None:intergenic 30.0%
TTCTATAACCATAGAGATCT+AGG + chr5_2:53524700-53524719 None:intergenic 30.0%
TATGGTTATAGAACACTGTA+AGG - chr5_2:53524707-53524726 Msa0776060:CDS 30.0%
ATAGAACACTGTAAGGTTTA+TGG - chr5_2:53524714-53524733 Msa0776060:CDS 30.0%
ATTAGAAAAAGCTGACATGT+TGG + chr5_2:53524887-53524906 None:intergenic 30.0%
ATGCAGTAAATTTCAATCCA+AGG + chr5_2:53524911-53524930 None:intergenic 30.0%
! GTGTTTTCAGAAAATGATCT+TGG - chr5_2:53525021-53525040 Msa0776060:CDS 30.0%
AGAACAACTTTCTAATTTCC+AGG - chr5_2:53525131-53525150 Msa0776060:intron 30.0%
AGCATATGTTAACTATGCAA+CGG + chr5_2:53525326-53525345 None:intergenic 30.0%
! CTCTATTTGGTTTACATTTC+TGG - chr5_2:53525498-53525517 Msa0776060:intron 30.0%
TTTGCATTATGAATCTGTAC+AGG - chr5_2:53525627-53525646 Msa0776060:intron 30.0%
TTGCATTATGAATCTGTACA+GGG - chr5_2:53525628-53525647 Msa0776060:intron 30.0%
AGGAAGTCTAAATACACATT+GGG + chr5_2:53525788-53525807 None:intergenic 30.0%
AAGGAAGTCTAAATACACAT+TGG + chr5_2:53525789-53525808 None:intergenic 30.0%
ATACGTTACTAAAGCTTGAT+AGG - chr5_2:53525857-53525876 Msa0776060:CDS 30.0%
ATAGGAACCTGTATTTAGTT+TGG - chr5_2:53525875-53525894 Msa0776060:CDS 30.0%
AGGCTATTCATTTGCATAAT+AGG - chr5_2:53526003-53526022 Msa0776060:CDS 30.0%
!!! TATGGAAGTCATTATTTTGG+TGG - chr5_2:53526037-53526056 Msa0776060:CDS 30.0%
ACTAATCATAATAAGATGGG+AGG - chr5_2:53526120-53526139 Msa0776060:CDS 30.0%
AAGAGAGTCATAATAAGATG+AGG - chr5_2:53526152-53526171 Msa0776060:CDS 30.0%
AGAGAGTCATAATAAGATGA+GGG - chr5_2:53526153-53526172 Msa0776060:CDS 30.0%
CACTCTGTTATTACTAATCA+TGG - chr5_2:53526202-53526221 Msa0776060:CDS 30.0%
!!! CTTTTTTTAGGAATATGGTG+AGG - chr5_2:53526238-53526257 Msa0776060:CDS 30.0%
AGCAAGTAATGAAAAGCTAT+TGG + chr5_2:53526282-53526301 None:intergenic 30.0%
!!! AAGAGTGATATTTTAGCTCT+TGG - chr5_2:53526369-53526388 Msa0776060:CDS 30.0%
!!! TACTGAAGTCATTATTTTGG+TGG - chr5_2:53526425-53526444 Msa0776060:CDS 30.0%
! TAACTTTTGTTCTTAGGATG+TGG - chr5_2:53526642-53526661 Msa0776060:intron 30.0%
AAGTACTAGATTAATAAGGG+TGG + chr5_2:53526725-53526744 None:intergenic 30.0%
GCTCAAGTACTAGATTAATA+AGG + chr5_2:53526320-53526339 None:intergenic 30.0%
CTCAACTTTATGTCATACTT+CGG - chr5_2:53526754-53526773 Msa0776060:intron 30.0%
ATGTGATATTAGATGTTAGG+TGG - chr5_2:53527204-53527223 Msa0776060:intron 30.0%
TCCAATCATGTTATTGTTGA+CGG + chr5_2:53527235-53527254 None:intergenic 30.0%
! AAGGACAAGTTTTACTGAAA+TGG + chr5_2:53527435-53527454 None:intergenic 30.0%
! TTTTGAACTTCAAACCTCTA+AGG - chr5_2:53527962-53527981 Msa0776060:intron 30.0%
TTTGAACTTCAAACCTCTAA+GGG - chr5_2:53527963-53527982 Msa0776060:intron 30.0%
ATTAATGGTAACTTAGGTGA+TGG - chr5_2:53528159-53528178 Msa0776060:intron 30.0%
ATATCAAATACCTGAAACAG+TGG + chr5_2:53528321-53528340 None:intergenic 30.0%
CTAACTTGGGAGAAATTTAA+TGG + chr5_2:53528424-53528443 None:intergenic 30.0%
AAGAACAAGCAAAACTCAAA+TGG + chr5_2:53528451-53528470 None:intergenic 30.0%
!! TTCTTTTTGCTGCTTCATTT+GGG - chr5_2:53528466-53528485 Msa0776060:intron 30.0%
GCCTCATAATAAGTGAAATT+TGG - chr5_2:53528641-53528660 Msa0776060:intron 30.0%
AACCATGGATATTATAAAGG+AGG + chr5_2:53528700-53528719 None:intergenic 30.0%
!! TTGGATTAATATGGTTTGCT+TGG - chr5_2:53528837-53528856 Msa0776060:intron 30.0%
ATGATATTTACCAACAGACT+AGG + chr5_2:53528875-53528894 None:intergenic 30.0%
! TGCAAGGTATTATAATTTCC+GGG + chr5_2:53528944-53528963 None:intergenic 30.0%
! ATGCTCAGATTTCAGTTTTT+GGG - chr5_2:53529108-53529127 Msa0776060:CDS 30.0%
GAGCTTCAATATTTAGTTGA+GGG + chr5_2:53529376-53529395 None:intergenic 30.0%
AGAGCTTCAATATTTAGTTG+AGG + chr5_2:53529377-53529396 None:intergenic 30.0%
! ATGTGTTTCATGATACCTTT+TGG - chr5_2:53529426-53529445 Msa0776060:intron 30.0%
! TGTGTTTCATGATACCTTTT+GGG - chr5_2:53529427-53529446 Msa0776060:intron 30.0%
AATGAATGAACAGTACACAT+CGG + chr5_2:53529644-53529663 None:intergenic 30.0%
AAATATGCATTTACTTCAGC+TGG + chr5_2:53529734-53529753 None:intergenic 30.0%
ATTAGTATATTCACTTGGGT+TGG + chr5_2:53529759-53529778 None:intergenic 30.0%
!!! AAGCATGGTTTTTTATTCAC+AGG - chr5_2:53529982-53530001 Msa0776060:intron 30.0%
TAACTTCTGCCAACTTTATA+GGG + chr5_2:53530226-53530245 None:intergenic 30.0%
ATAACTTCTGCCAACTTTAT+AGG + chr5_2:53530227-53530246 None:intergenic 30.0%
!!! ACTATTTTTGCATCCTTCTT+TGG + chr5_2:53530278-53530297 None:intergenic 30.0%
AAAAATAGTGACAGATGAGA+AGG - chr5_2:53530289-53530308 Msa0776060:intron 30.0%
! ATCATCATCCTGCAATTTTT+AGG + chr5_2:53530633-53530652 None:intergenic 30.0%
! TTTTCAATAGCATGTTTCCT+AGG - chr5_2:53531059-53531078 Msa0776060:CDS 30.0%
GGAAATAAATGGATACTTGA+GGG + chr5_2:53531216-53531235 None:intergenic 30.0%
ATTGTATGAAAACAGCTCAA+CGG + chr5_2:53531237-53531256 None:intergenic 30.0%
AACTCAAATATGAACTGAGA+CGG + chr5_2:53531357-53531376 None:intergenic 30.0%
!! TTTGAGTTGAAAAGCAACTT+CGG - chr5_2:53531369-53531388 Msa0776060:intron 30.0%
TTAACCAATGTTTCTTGAGA+TGG - chr5_2:53531431-53531450 Msa0776060:five_prime_UTR 30.0%
! GTAAAGAGTGTAATAGGGTT+TGG + chr5_2:53522606-53522625 None:intergenic 35.0%
! TCTTTTTCTTTCGTTCGGTT+TGG + chr5_2:53522635-53522654 None:intergenic 35.0%
ACCGATAAGGAAGAAAAGAA+TGG + chr5_2:53522692-53522711 None:intergenic 35.0%
TAGGAAGAAGATGATGAATC+TGG + chr5_2:53522721-53522740 None:intergenic 35.0%
GAAATAATCTGCTGAATACG+CGG + chr5_2:53522887-53522906 None:intergenic 35.0%
!!! GTCTCTTTTTTGGAAGCATA+TGG + chr5_2:53522911-53522930 None:intergenic 35.0%
!!! CCTTCACTAAGTCTCTTTTT+TGG + chr5_2:53522921-53522940 None:intergenic 35.0%
CCAAAAAAGAGACTTAGTGA+AGG - chr5_2:53522918-53522937 Msa0776060:CDS 35.0%
! CTGTTGCTGTTGTTGTTAAT+CGG + chr5_2:53522963-53522982 None:intergenic 35.0%
!! TTTTGGAAATTCTAACTCGC+AGG - chr5_2:53523109-53523128 Msa0776060:CDS 35.0%
!! TTGATAGATCTAGCTTTGTG+TGG - chr5_2:53523294-53523313 Msa0776060:CDS 35.0%
AGTAAGCTGATTGAATTTGC+AGG - chr5_2:53523391-53523410 Msa0776060:CDS 35.0%
GTAAGCTGATTGAATTTGCA+GGG - chr5_2:53523392-53523411 Msa0776060:CDS 35.0%
GCTCATAGCTTAAAGCTTAT+AGG + chr5_2:53523525-53523544 None:intergenic 35.0%
TAAGCTATGAGCTACTTGTT+CGG - chr5_2:53523533-53523552 Msa0776060:intron 35.0%
TGTTATTGTTTAGGGGATGT+TGG - chr5_2:53523586-53523605 Msa0776060:intron 35.0%
GTTATTGTTTAGGGGATGTT+GGG - chr5_2:53523587-53523606 Msa0776060:intron 35.0%
! TAGCGGATATCTGATAAGTT+AGG - chr5_2:53523744-53523763 Msa0776060:CDS 35.0%
TACTTTCCAAACAAACCACT+AGG - chr5_2:53524062-53524081 Msa0776060:intron 35.0%
!! GCAATTAAAGGGCATTTGAA+AGG - chr5_2:53524140-53524159 Msa0776060:intron 35.0%
! ACGTTTATCAATGGGAGTAT+GGG + chr5_2:53524355-53524374 None:intergenic 35.0%
ATCCGAAGACGTTTATCAAT+GGG + chr5_2:53524363-53524382 None:intergenic 35.0%
TATCCGAAGACGTTTATCAA+TGG + chr5_2:53524364-53524383 None:intergenic 35.0%
TTATTAGACAAGTGTTCACG+AGG - chr5_2:53524430-53524449 Msa0776060:CDS 35.0%
TTATTAAGGTAGCATTCGGA+AGG + chr5_2:53524658-53524677 None:intergenic 35.0%
! GTTGGAGAGCGATTTTATTA+AGG + chr5_2:53524672-53524691 None:intergenic 35.0%
ACTGTAAGGTTTATGGATCA+TGG - chr5_2:53524721-53524740 Msa0776060:CDS 35.0%
GCAAAGAATCTTATTCTTGC+TGG - chr5_2:53524934-53524953 Msa0776060:CDS 35.0%
! TTCTGAAAACACAAAGTTGC+TGG + chr5_2:53525013-53525032 None:intergenic 35.0%
GTGATTGTGTATGGAATTGT+AGG - chr5_2:53525220-53525239 Msa0776060:intron 35.0%
TGCATATCAACTACAAAACC+TGG - chr5_2:53525361-53525380 Msa0776060:intron 35.0%
AGCATGTGAAGATGAAACAA+AGG + chr5_2:53525459-53525478 None:intergenic 35.0%
!!! AAGTCATTATTTTGGTGGCT+AGG - chr5_2:53526042-53526061 Msa0776060:CDS 35.0%
!!! AGTCATTATTTTGGTGGCTA+GGG - chr5_2:53526043-53526062 Msa0776060:CDS 35.0%
GAGAGTCATAATAAGATGAG+GGG - chr5_2:53526154-53526173 Msa0776060:CDS 35.0%
! ATGAGGGGCATATTATTCTA+CGG - chr5_2:53526169-53526188 Msa0776060:CDS 35.0%
AGTTATGGTAGTTGCGAATT+AGG - chr5_2:53526542-53526561 Msa0776060:intron 35.0%
TATGTATGATATGTGACGAG+TGG + chr5_2:53526818-53526837 None:intergenic 35.0%
GTCTTGGGTCTATGATTAAT+TGG - chr5_2:53526861-53526880 Msa0776060:intron 35.0%
AAAGAAGAATAGCTGCAAAC+CGG - chr5_2:53526925-53526944 Msa0776060:intron 35.0%
ACCGTCAACAATAACATGAT+TGG - chr5_2:53527231-53527250 Msa0776060:intron 35.0%
AGACGGTCTACAACAATATA+AGG + chr5_2:53527275-53527294 None:intergenic 35.0%
TATTGTGTGACTGTGATAGA+CGG + chr5_2:53527292-53527311 None:intergenic 35.0%
CAGTCACACAATAATTCTGA+TGG - chr5_2:53527299-53527318 Msa0776060:intron 35.0%
GCACTATACAACTACAAAGA+AGG + chr5_2:53527454-53527473 None:intergenic 35.0%
! ACTGAAGTTAGAGGTCTTTT+TGG - chr5_2:53527625-53527644 Msa0776060:intron 35.0%
! GTTCCGTGTTTTGTGATTTT+GGG - chr5_2:53527647-53527666 Msa0776060:intron 35.0%
ACATCAACAACAGTAAACTC+AGG + chr5_2:53527673-53527692 None:intergenic 35.0%
TTTACTGTTGTTGATGTCGA+TGG - chr5_2:53527676-53527695 Msa0776060:intron 35.0%
GAACTTCAGAGAATACAACA+AGG + chr5_2:53527801-53527820 None:intergenic 35.0%
!! GTTGTATTCTCTGAAGTTCA+TGG - chr5_2:53527802-53527821 Msa0776060:intron 35.0%
GGTATGAAAGAGTTGAATGA+CGG - chr5_2:53527823-53527842 Msa0776060:intron 35.0%
AACTATGGTGCCTATGAAAA+AGG - chr5_2:53527907-53527926 Msa0776060:intron 35.0%
!! GACAATACCACCTTTTTCAT+AGG + chr5_2:53527920-53527939 None:intergenic 35.0%
CAAATTTCATCCACTGTTTC+AGG - chr5_2:53528308-53528327 Msa0776060:intron 35.0%
ATGGCAAAATACCTCCATAA+GGG + chr5_2:53528405-53528424 None:intergenic 35.0%
AATGGCAAAATACCTCCATA+AGG + chr5_2:53528406-53528425 None:intergenic 35.0%
!! GTTCTTTTTGCTGCTTCATT+TGG - chr5_2:53528465-53528484 Msa0776060:intron 35.0%
!! GCTTTCCAATATTTTGAGCA+AGG - chr5_2:53528600-53528619 Msa0776060:intron 35.0%
!! AATATTTTGAGCAAGGCACT+CGG - chr5_2:53528607-53528626 Msa0776060:intron 35.0%
GACCTCCTTTATAATATCCA+TGG - chr5_2:53528695-53528714 Msa0776060:intron 35.0%
TAACAGTAAGCCAAACATTG+AGG - chr5_2:53528777-53528796 Msa0776060:intron 35.0%
TTTGACAATGCCTCAATGTT+TGG + chr5_2:53528790-53528809 None:intergenic 35.0%
! GCAAGGTATTATAATTTCCG+GGG + chr5_2:53528943-53528962 None:intergenic 35.0%
! GTTTTTCTATTTCGACTCTG+TGG - chr5_2:53529025-53529044 Msa0776060:CDS 35.0%
GCATCGTAACGACTATTTAT+TGG + chr5_2:53529092-53529111 None:intergenic 35.0%
! GATGCTCAGATTTCAGTTTT+TGG - chr5_2:53529107-53529126 Msa0776060:CDS 35.0%
!! GATGCTAAAGTGTTTGTTGT+TGG - chr5_2:53529155-53529174 Msa0776060:intron 35.0%
!! AAAGTGTTTGTTGTTGGATC+TGG - chr5_2:53529161-53529180 Msa0776060:intron 35.0%
TAGAGAAGAGTAACTTAAGC+AGG - chr5_2:53529276-53529295 Msa0776060:intron 35.0%
TTTCAGTTTCAGAGCTAACA+CGG + chr5_2:53529406-53529425 None:intergenic 35.0%
! AACACTCAAGTTTTCCCAAA+AGG + chr5_2:53529444-53529463 None:intergenic 35.0%
! GAAGTGGTTTCTGGAAATAT+AGG + chr5_2:53529520-53529539 None:intergenic 35.0%
! ACCATAGTTTTCTGTTAGGT+GGG + chr5_2:53529591-53529610 None:intergenic 35.0%
ACTAATGCTATGAAGAATGC+TGG - chr5_2:53529773-53529792 Msa0776060:intron 35.0%
AAAAAACCATGCTTGAGTGT+AGG + chr5_2:53529976-53529995 None:intergenic 35.0%
TATAAGCTAACTGCTTCACT+CGG + chr5_2:53530028-53530047 None:intergenic 35.0%
!! GTTAGCTTATACTTTTCCTG+AGG - chr5_2:53530037-53530056 Msa0776060:intron 35.0%
GGTGAAAAACCCTATAAAGT+TGG - chr5_2:53530214-53530233 Msa0776060:intron 35.0%
TTGTCAAGTTAGAGAGATTG+CGG - chr5_2:53530366-53530385 Msa0776060:intron 35.0%
TATACCTTCTCAAACTGGAT+TGG + chr5_2:53530422-53530441 None:intergenic 35.0%
AGAATATTCACCTTGTTGCT+TGG - chr5_2:53530462-53530481 Msa0776060:intron 35.0%
TTGGAAGTTTGTACATGCTT+AGG - chr5_2:53530535-53530554 Msa0776060:intron 35.0%
TATGTATTGTGAACCCAGAT+TGG + chr5_2:53530571-53530590 None:intergenic 35.0%
!! TCTGGAGTTTTACAAAGCTT+TGG - chr5_2:53530808-53530827 Msa0776060:intron 35.0%
!!! GAGTTTTACAAAGCTTTGGA+TGG - chr5_2:53530812-53530831 Msa0776060:intron 35.0%
!!! TTTTACAAAGCTTTGGATGG+AGG - chr5_2:53530815-53530834 Msa0776060:intron 35.0%
!! TTTACAAAGCTTTGGATGGA+GGG - chr5_2:53530816-53530835 Msa0776060:intron 35.0%
TCAAGCATCAAGATTTGAGT+TGG - chr5_2:53530924-53530943 Msa0776060:CDS 35.0%
TAAAAGACAATCCTACTCTC+AGG - chr5_2:53530969-53530988 Msa0776060:CDS 35.0%
AAAAGACAATCCTACTCTCA+GGG - chr5_2:53530970-53530989 Msa0776060:CDS 35.0%
GAAACATGCTATTGAAAAGC+AGG + chr5_2:53531057-53531076 None:intergenic 35.0%
CGGAAATAAATGGATACTTG+AGG + chr5_2:53531217-53531236 None:intergenic 35.0%
AACAGCTCAACGGAAATAAA+TGG + chr5_2:53531227-53531246 None:intergenic 35.0%
TTCACCATCTCAAGAAACAT+TGG + chr5_2:53531438-53531457 None:intergenic 35.0%
! AATCTGGAAACGTACCGATA+AGG + chr5_2:53522705-53522724 None:intergenic 40.0%
CGACTTAGGTTCAGTTAAGA+AGG - chr5_2:53522983-53523002 Msa0776060:CDS 40.0%
TAGGTTCAGTTAAGAAGGTG+CGG - chr5_2:53522988-53523007 Msa0776060:CDS 40.0%
GGCGATAACAATAACAGTAC+CGG - chr5_2:53523059-53523078 Msa0776060:CDS 40.0%
GCGATAACAATAACAGTACC+GGG - chr5_2:53523060-53523079 Msa0776060:CDS 40.0%
!! ATCATGCCTAGTGGTTTGTT+TGG + chr5_2:53524071-53524090 None:intergenic 40.0%
GACGTTTATCAATGGGAGTA+TGG + chr5_2:53524356-53524375 None:intergenic 40.0%
CTCCCATTGATAAACGTCTT+CGG - chr5_2:53524358-53524377 Msa0776060:CDS 40.0%
TCAACAAACGAAGAGGCAAT+AGG - chr5_2:53524512-53524531 Msa0776060:CDS 40.0%
CAACAAACGAAGAGGCAATA+GGG - chr5_2:53524513-53524532 Msa0776060:CDS 40.0%
ACAATAAGCTATCGGAGCTT+AGG - chr5_2:53524564-53524583 Msa0776060:CDS 40.0%
!! GTCAGCTTTTTCTAATGCCT+TGG - chr5_2:53524891-53524910 Msa0776060:CDS 40.0%
ATGAAGGGACTGTAGAGTTA+TGG - chr5_2:53524980-53524999 Msa0776060:CDS 40.0%
TGAAGGGACTGTAGAGTTAT+GGG - chr5_2:53524981-53525000 Msa0776060:CDS 40.0%
!! AGAGCAAAAGTAGAAGTACC+TGG + chr5_2:53525152-53525171 None:intergenic 40.0%
AACTATGCAACGGAAGATCT+GGG + chr5_2:53525316-53525335 None:intergenic 40.0%
TAACTATGCAACGGAAGATC+TGG + chr5_2:53525317-53525336 None:intergenic 40.0%
!! TTCCTTTGAACTCTGAGATG+AGG - chr5_2:53525803-53525822 Msa0776060:CDS 40.0%
! TGAGGGGCATATTATTCTAC+GGG - chr5_2:53526170-53526189 Msa0776060:CDS 40.0%
TTCATTACTTGCTCTGTGCT+TGG - chr5_2:53526289-53526308 Msa0776060:CDS 40.0%
TCATTACTTGCTCTGTGCTT+GGG - chr5_2:53526290-53526309 Msa0776060:CDS 40.0%
CCATAACTGTCTCATGAGTT+GGG + chr5_2:53526530-53526549 None:intergenic 40.0%
ACCATAACTGTCTCATGAGT+TGG + chr5_2:53526531-53526550 None:intergenic 40.0%
GAGTCGTGATAAAAGATGAG+AGG - chr5_2:53526566-53526585 Msa0776060:intron 40.0%
TTTGTTCTTAGGATGTGGTG+AGG - chr5_2:53526647-53526666 Msa0776060:intron 40.0%
TTGTTCTTAGGATGTGGTGA+GGG - chr5_2:53526648-53526667 Msa0776060:intron 40.0%
TCTGTAAGATATGTGACGAG+TGG + chr5_2:53526788-53526807 None:intergenic 40.0%
AAGAAGAATAGCTGCAAACC+GGG - chr5_2:53526926-53526945 Msa0776060:intron 40.0%
ATAGTCACATACATGTGACC+CGG + chr5_2:53526947-53526966 None:intergenic 40.0%
! GGTTCCGTGTTTTGTGATTT+TGG - chr5_2:53527646-53527665 Msa0776060:intron 40.0%
AGGCCCAAAATCACAAAACA+CGG + chr5_2:53527653-53527672 None:intergenic 40.0%
GACGCAATTATTCCAGTATG+TGG + chr5_2:53527709-53527728 None:intergenic 40.0%
CAACACAAGAAACTAGAGCA+GGG + chr5_2:53527747-53527766 None:intergenic 40.0%
TCAACACAAGAAACTAGAGC+AGG + chr5_2:53527748-53527767 None:intergenic 40.0%
TGATGAGAGACTTGAGTTTC+AGG - chr5_2:53527768-53527787 Msa0776060:intron 40.0%
GAAGAAGACACCACAAACTA+TGG - chr5_2:53527892-53527911 Msa0776060:intron 40.0%
TTCATAGGCACCATAGTTTG+TGG + chr5_2:53527905-53527924 None:intergenic 40.0%
TATGGTGCCTATGAAAAAGG+TGG - chr5_2:53527910-53527929 Msa0776060:intron 40.0%
AAAAGGTGGTATTGTCACAC+AGG - chr5_2:53527924-53527943 Msa0776060:intron 40.0%
GTTCAAAACCTGTGGTTGTT+TGG + chr5_2:53527950-53527969 None:intergenic 40.0%
! GGTTTGAAGTTCAAAACCTG+TGG + chr5_2:53527958-53527977 None:intergenic 40.0%
ATGCTAGATGCAGTATAGGT+GGG + chr5_2:53528044-53528063 None:intergenic 40.0%
AATGCTAGATGCAGTATAGG+TGG + chr5_2:53528045-53528064 None:intergenic 40.0%
TGGAATGCTAGATGCAGTAT+AGG + chr5_2:53528048-53528067 None:intergenic 40.0%
TATACTGCATCTAGCATTCC+AGG - chr5_2:53528047-53528066 Msa0776060:intron 40.0%
!! ATGGTAACTTAGGTGATGGA+AGG - chr5_2:53528163-53528182 Msa0776060:intron 40.0%
!! TAACTTAGGTGATGGAAGGT+TGG - chr5_2:53528167-53528186 Msa0776060:intron 40.0%
GCAAATTGCTGTAGAAGCTT+GGG + chr5_2:53528204-53528223 None:intergenic 40.0%
CTTCTACAGCAATTTGCCTT+TGG - chr5_2:53528207-53528226 Msa0776060:intron 40.0%
TCCTACAATTCCACCAAACA+TGG + chr5_2:53528262-53528281 None:intergenic 40.0%
ACAAGCAAAACTCAAATGGC+TGG + chr5_2:53528447-53528466 None:intergenic 40.0%
GAGTGCCTTGCTCAAAATAT+TGG + chr5_2:53528608-53528627 None:intergenic 40.0%
ATGAATGCTTGGGAAAACCA+TGG + chr5_2:53528715-53528734 None:intergenic 40.0%
CATGCAATGCATGAATGCTT+GGG + chr5_2:53528725-53528744 None:intergenic 40.0%
ACATGCAATGCATGAATGCT+TGG + chr5_2:53528726-53528745 None:intergenic 40.0%
! GTTTGGCTTACTGTTAGACA+GGG + chr5_2:53528773-53528792 None:intergenic 40.0%
! TGTTTGGCTTACTGTTAGAC+AGG + chr5_2:53528774-53528793 None:intergenic 40.0%
TATTATAATTTCCGGGGAGG+GGG + chr5_2:53528937-53528956 None:intergenic 40.0%
GTATTATAATTTCCGGGGAG+GGG + chr5_2:53528938-53528957 None:intergenic 40.0%
GGTATTATAATTTCCGGGGA+GGG + chr5_2:53528939-53528958 None:intergenic 40.0%
AGGTATTATAATTTCCGGGG+AGG + chr5_2:53528940-53528959 None:intergenic 40.0%
CAAATACAACTTCGACTGGA+AGG + chr5_2:53528969-53528988 None:intergenic 40.0%
TCCAGTCGAAGTTGTATTTG+TGG - chr5_2:53528969-53528988 Msa0776060:CDS 40.0%
ACCACAAATACAACTTCGAC+TGG + chr5_2:53528973-53528992 None:intergenic 40.0%
! TTAGGATGCAATGGTTCTGT+AGG + chr5_2:53529059-53529078 None:intergenic 40.0%
TCCACAAGAAACTCCCATTA+AGG + chr5_2:53529219-53529238 None:intergenic 40.0%
TTAATGGGAGTTTCTTGTGG+AGG - chr5_2:53529218-53529237 Msa0776060:intron 40.0%
TGTGAATGCAAGACTATACG+TGG - chr5_2:53529484-53529503 Msa0776060:intron 40.0%
CAGATTCAAGAAGTGGTTTC+TGG + chr5_2:53529529-53529548 None:intergenic 40.0%
CAGAAACCACTTCTTGAATC+TGG - chr5_2:53529527-53529546 Msa0776060:intron 40.0%
AGAGTTCCAGATTCAAGAAG+TGG + chr5_2:53529536-53529555 None:intergenic 40.0%
! CTTCTTGAATCTGGAACTCT+TGG - chr5_2:53529536-53529555 Msa0776060:intron 40.0%
AGCTAAATGCAATACCCAGA+TGG - chr5_2:53529559-53529578 Msa0776060:intron 40.0%
! CCATAGTTTTCTGTTAGGTG+GGG + chr5_2:53529590-53529609 None:intergenic 40.0%
! CACCATAGTTTTCTGTTAGG+TGG + chr5_2:53529592-53529611 None:intergenic 40.0%
! AGGCACCATAGTTTTCTGTT+AGG + chr5_2:53529595-53529614 None:intergenic 40.0%
AAGATTGTATTACTTGGGCC+AGG - chr5_2:53529867-53529886 Msa0776060:intron 40.0%
CAAGCAAACATACTTAAGCC+TGG + chr5_2:53529888-53529907 None:intergenic 40.0%
ATCAGAAACTGGAGATGACT+TGG + chr5_2:53530143-53530162 None:intergenic 40.0%
AAGTCATCTCCAGTTTCTGA+TGG - chr5_2:53530142-53530161 Msa0776060:intron 40.0%
ATACTACGCGCAGAAACATT+TGG - chr5_2:53530173-53530192 Msa0776060:intron 40.0%
TAGGATAGAATCTGCCAATC+TGG - chr5_2:53530554-53530573 Msa0776060:intron 40.0%
AGGATAGAATCTGCCAATCT+GGG - chr5_2:53530555-53530574 Msa0776060:intron 40.0%
TACCATATGGATGTGATAGC+TGG - chr5_2:53530659-53530678 Msa0776060:intron 40.0%
ACCATATGGATGTGATAGCT+GGG - chr5_2:53530660-53530679 Msa0776060:intron 40.0%
TGAAGGCCAAGTTTATTGCT+GGG - chr5_2:53530732-53530751 Msa0776060:intron 40.0%
TGTAAAACTCCAGACAGACA+AGG + chr5_2:53530802-53530821 None:intergenic 40.0%
!! CTAAGTTGGCAAAGGTGTTT+CGG + chr5_2:53530859-53530878 None:intergenic 40.0%
!! AAGATTTGAGTTGGACTGTG+TGG - chr5_2:53530933-53530952 Msa0776060:CDS 40.0%
!! AGATTTGAGTTGGACTGTGT+GGG - chr5_2:53530934-53530953 Msa0776060:CDS 40.0%
! CTTGATTGGCTGAAGGAAAA+AGG - chr5_2:53530998-53531017 Msa0776060:CDS 40.0%
GTATGAAGGGATTTCCATCT+TGG + chr5_2:53531134-53531153 None:intergenic 40.0%
CAACAACATCTATGTGACGA+CGG + chr5_2:53531156-53531175 None:intergenic 40.0%
TCGTCACATAGATGTTGTTG+TGG - chr5_2:53531156-53531175 Msa0776060:exon 40.0%
AACAACAGCAACAGCGACTT+AGG - chr5_2:53522969-53522988 Msa0776060:CDS 45.0%
! TCAGTTAAGAAGGTGCGGAA+CGG - chr5_2:53522993-53523012 Msa0776060:CDS 45.0%
ACTCTTGTCACTCTCGTTCA+CGG + chr5_2:53523027-53523046 None:intergenic 45.0%
GACAAGAGTTTCAGTAGCAG+CGG - chr5_2:53523038-53523057 Msa0776060:CDS 45.0%
! CAGTACCGGGAATTTGATTG+CGG - chr5_2:53523073-53523092 Msa0776060:CDS 45.0%
TAACTCGCAGGAGATTGATG+AGG - chr5_2:53523121-53523140 Msa0776060:CDS 45.0%
TTGATGAGGATCTGCATAGC+AGG - chr5_2:53523135-53523154 Msa0776060:CDS 45.0%
TGTATGGTAGGGAGACTATG+AGG - chr5_2:53523168-53523187 Msa0776060:CDS 45.0%
! GCGAGTAGTGTTCTTGTTTC+CGG - chr5_2:53523200-53523219 Msa0776060:CDS 45.0%
! CGAGTAGTGTTCTTGTTTCC+GGG - chr5_2:53523201-53523220 Msa0776060:CDS 45.0%
!! TTGGGACTTGGTGTTGAGAT+TGG - chr5_2:53523605-53523624 Msa0776060:intron 45.0%
! ATAGAGATCTAGGGTGTGGT+TGG + chr5_2:53524690-53524709 None:intergenic 45.0%
AACCACACCCTAGATCTCTA+TGG - chr5_2:53524689-53524708 Msa0776060:CDS 45.0%
! AACCATAGAGATCTAGGGTG+TGG + chr5_2:53524694-53524713 None:intergenic 45.0%
TCTGTAACCTTGCACGATGA+AGG - chr5_2:53524964-53524983 Msa0776060:CDS 45.0%
CTGTAACCTTGCACGATGAA+GGG - chr5_2:53524965-53524984 Msa0776060:CDS 45.0%
TCTTGGTAAAAACAGGGCAG+TGG - chr5_2:53525038-53525057 Msa0776060:intron 45.0%
GCGAGCACATCACATATACT+TGG - chr5_2:53525650-53525669 Msa0776060:intron 45.0%
CACCTCATCTCAGAGTTCAA+AGG + chr5_2:53525808-53525827 None:intergenic 45.0%
!! ATTTTGGTGGCTAGGGAGTA+TGG - chr5_2:53526050-53526069 Msa0776060:CDS 45.0%
! GAGGGGCATATTATTCTACG+GGG - chr5_2:53526171-53526190 Msa0776060:CDS 45.0%
CCCAACTCATGAGACAGTTA+TGG - chr5_2:53526527-53526546 Msa0776060:intron 45.0%
TGTTGTTGATGTCGATGGAG+AGG - chr5_2:53527681-53527700 Msa0776060:intron 45.0%
GAGAGACTTGAGTTTCAGGA+TGG - chr5_2:53527772-53527791 Msa0776060:intron 45.0%
TCATTGAGTGCTTCCCTTAG+AGG + chr5_2:53527979-53527998 None:intergenic 45.0%
TCGCTAAGAAGAAATTCGCC+TGG + chr5_2:53528003-53528022 None:intergenic 45.0%
GGCAAATTGCTGTAGAAGCT+TGG + chr5_2:53528205-53528224 None:intergenic 45.0%
!! AGCAATTTGCCTTTGGTGCT+AGG - chr5_2:53528214-53528233 Msa0776060:intron 45.0%
!! GCAATTTGCCTTTGGTGCTA+GGG - chr5_2:53528215-53528234 Msa0776060:intron 45.0%
! TAGGGCAGTATTGAACCCTA+TGG - chr5_2:53528233-53528252 Msa0776060:intron 45.0%
! GCCATGTTTGGTGGAATTGT+AGG - chr5_2:53528258-53528277 Msa0776060:intron 45.0%
TGGTGGAATTGTAGGACAAG+AGG - chr5_2:53528266-53528285 Msa0776060:intron 45.0%
GCAAATGACGTTAGCCCTTA+TGG - chr5_2:53528388-53528407 Msa0776060:intron 45.0%
AATGACGTTAGCCCTTATGG+AGG - chr5_2:53528391-53528410 Msa0776060:intron 45.0%
! CTCAAATGGCTGGCTAACTT+GGG + chr5_2:53528437-53528456 None:intergenic 45.0%
! ACTCAAATGGCTGGCTAACT+TGG + chr5_2:53528438-53528457 None:intergenic 45.0%
TTAGACAGGGATTGTTGTGC+AGG + chr5_2:53528760-53528779 None:intergenic 45.0%
GCCTTAATGGGAGTTTCTTG+TGG - chr5_2:53529215-53529234 Msa0776060:intron 45.0%
GAGTTTCTTGTGGAGGTCAA+GGG - chr5_2:53529225-53529244 Msa0776060:intron 45.0%
CAATATTCCAATCGCGGAAG+AGG + chr5_2:53529307-53529326 None:intergenic 45.0%
CTCTTCCGCGATTGGAATAT+TGG - chr5_2:53529305-53529324 Msa0776060:intron 45.0%
CCCCACCTAACAGAAAACTA+TGG - chr5_2:53529587-53529606 Msa0776060:intron 45.0%
! ACATCGGTGCTTGTTTCTCA+GGG + chr5_2:53529628-53529647 None:intergenic 45.0%
AAGCAGTGGTCAATGTTGTG+TGG + chr5_2:53529668-53529687 None:intergenic 45.0%
ACATTGACCACTGCTTGACT+TGG - chr5_2:53529672-53529691 Msa0776060:intron 45.0%
CATTGACCACTGCTTGACTT+GGG - chr5_2:53529673-53529692 Msa0776060:intron 45.0%
TGCTCAGGCAAGGGATAATT+TGG - chr5_2:53529799-53529818 Msa0776060:intron 45.0%
CGTTCTTGAATGCTTGGACA+AGG - chr5_2:53529826-53529845 Msa0776060:intron 45.0%
GTATGTCCTACACTCAAGCA+TGG - chr5_2:53529967-53529986 Msa0776060:intron 45.0%
!! CTAGTACTGGAGCTCCATTT+TGG - chr5_2:53530069-53530088 Msa0776060:intron 45.0%
! TGTTTCTGCGCGTAGTATAG+AGG + chr5_2:53530171-53530190 None:intergenic 45.0%
! TAGGGTTTTTCACCCAGTCA+GGG + chr5_2:53530208-53530227 None:intergenic 45.0%
! ATAGGGTTTTTCACCCAGTC+AGG + chr5_2:53530209-53530228 None:intergenic 45.0%
ACCTGACTTTCAGCCAAAGA+AGG - chr5_2:53530262-53530281 Msa0776060:intron 45.0%
TCCTTCTTTGGCTGAAAGTC+AGG + chr5_2:53530266-53530285 None:intergenic 45.0%
! ATTGGCTTCATCCTGAATCC+TGG + chr5_2:53530404-53530423 None:intergenic 45.0%
GAAGCCAATCCAGTTTGAGA+AGG - chr5_2:53530415-53530434 Msa0776060:intron 45.0%
GTAATTGCGTGCTCTCATGT+TGG + chr5_2:53530690-53530709 None:intergenic 45.0%
TCCTGAAGTTGACAAGCTGA+AGG - chr5_2:53530715-53530734 Msa0776060:intron 45.0%
CTGAAGGCCAAGTTTATTGC+TGG - chr5_2:53530731-53530750 Msa0776060:intron 45.0%
GATTGCAACCTCAACTGCTA+TGG - chr5_2:53530769-53530788 Msa0776060:intron 45.0%
! TGATGCTTGATGACCTTTGC+CGG + chr5_2:53530914-53530933 None:intergenic 45.0%
TGTTTCCTAGGCACAAAGAG+CGG - chr5_2:53531071-53531090 Msa0776060:CDS 45.0%
AGCAAGGGATATTGCCAAGA+TGG - chr5_2:53531117-53531136 Msa0776060:CDS 45.0%
CTATGTGACGACGGTATGAA+GGG + chr5_2:53531147-53531166 None:intergenic 45.0%
TCTATGTGACGACGGTATGA+AGG + chr5_2:53531148-53531167 None:intergenic 45.0%
! AGATGTTGTTGTGGCTTGTG+AGG - chr5_2:53531165-53531184 Msa0776060:intron 45.0%
TCCTTATTCGTAGTGCCTTC+AGG - chr5_2:53531310-53531329 Msa0776060:intron 45.0%
!!! ATTTATTTTATTATTTTAAC+TGG + chr5_2:53525839-53525858 None:intergenic 5.0%
!!! CTTTATTTTTTATATATAAT+TGG - chr5_2:53527325-53527344 Msa0776060:intron 5.0%
! TTTGATTGCGGCGTCGAGTA+TGG - chr5_2:53523085-53523104 Msa0776060:CDS 50.0%
!! GCAGCTTGCTGTGTATGGTA+GGG - chr5_2:53523157-53523176 Msa0776060:CDS 50.0%
ATGGTAGGGAGACTATGAGG+AGG - chr5_2:53523171-53523190 Msa0776060:CDS 50.0%
TGTTCGGTCGTGAGACTATG+AGG - chr5_2:53523549-53523568 Msa0776060:intron 50.0%
GTTTAGGGGATGTTGGGACT+TGG - chr5_2:53523593-53523612 Msa0776060:intron 50.0%
TACAGTCCCTTCATCGTGCA+AGG + chr5_2:53524974-53524993 None:intergenic 50.0%
CAATTGGAGGCTGATGACTG+TGG + chr5_2:53527594-53527613 None:intergenic 50.0%
GATGGAGAGGAACCACATAC+TGG - chr5_2:53527694-53527713 Msa0776060:intron 50.0%
AGCAGGGTTGTCATTGCTGA+TGG + chr5_2:53527731-53527750 None:intergenic 50.0%
!! AGGGAAGCACTCAATGATCC+AGG - chr5_2:53527982-53528001 Msa0776060:intron 50.0%
CTAGATGCAGTATAGGTGGG+CGG + chr5_2:53528041-53528060 None:intergenic 50.0%
CAATACTGCCCTAGCACCAA+AGG + chr5_2:53528226-53528245 None:intergenic 50.0%
AACCCTATGGCTGCCATGTT+TGG - chr5_2:53528246-53528265 Msa0776060:intron 50.0%
CACCAAACATGGCAGCCATA+GGG + chr5_2:53528251-53528270 None:intergenic 50.0%
GAGGTTGTCAAAGCATGCTC+TGG - chr5_2:53528285-53528304 Msa0776060:intron 50.0%
CTTCGACTGGAAGGAATGCA+AGG + chr5_2:53528960-53528979 None:intergenic 50.0%
TGTTGTTGGATCTGGTGCAC+TGG - chr5_2:53529169-53529188 Msa0776060:intron 50.0%
GTTGTTGGATCTGGTGCACT+GGG - chr5_2:53529170-53529189 Msa0776060:intron 50.0%
GGAGTTTCTTGTGGAGGTCA+AGG - chr5_2:53529224-53529243 Msa0776060:intron 50.0%
CCTGGCCAATATTCCAATCG+CGG + chr5_2:53529313-53529332 None:intergenic 50.0%
TAGGTGGGGAATGACCATCT+GGG + chr5_2:53529576-53529595 None:intergenic 50.0%
TTAGGTGGGGAATGACCATC+TGG + chr5_2:53529577-53529596 None:intergenic 50.0%
TTTCTCAGGGGGATCTCTTG+AGG + chr5_2:53529615-53529634 None:intergenic 50.0%
! ATCGGTGCTTGTTTCTCAGG+GGG + chr5_2:53529626-53529645 None:intergenic 50.0%
! CATCGGTGCTTGTTTCTCAG+GGG + chr5_2:53529627-53529646 None:intergenic 50.0%
! CACATCGGTGCTTGTTTCTC+AGG + chr5_2:53529629-53529648 None:intergenic 50.0%
TTGGGCTCGATCAGAGTTTG+AGG - chr5_2:53529691-53529710 Msa0776060:intron 50.0%
TGGGCTCGATCAGAGTTTGA+GGG - chr5_2:53529692-53529711 Msa0776060:intron 50.0%
! GAAGAATGCTGGTGATGCTC+AGG - chr5_2:53529784-53529803 Msa0776060:intron 50.0%
GTACTAGTTGCAGCATCCTC+AGG + chr5_2:53530056-53530075 None:intergenic 50.0%
GAGGATGCTGCAACTAGTAC+TGG - chr5_2:53530056-53530075 Msa0776060:intron 50.0%
! CGTTTCGGTGCAGACCAAAA+TGG + chr5_2:53530086-53530105 None:intergenic 50.0%
AGTGGACGAGGGAATCGTTT+CGG + chr5_2:53530101-53530120 None:intergenic 50.0%
! GAGATGACTTGGATCAGAGG+AGG + chr5_2:53530132-53530151 None:intergenic 50.0%
! CTGGAGATGACTTGGATCAG+AGG + chr5_2:53530135-53530154 None:intergenic 50.0%
TAGAGGCTGCCATCAGAAAC+TGG + chr5_2:53530154-53530173 None:intergenic 50.0%
! TTTTCACCCAGTCAGGGGTA+GGG + chr5_2:53530202-53530221 None:intergenic 50.0%
! TTTTTCACCCAGTCAGGGGT+AGG + chr5_2:53530203-53530222 None:intergenic 50.0%
! AGGGTTTTTCACCCAGTCAG+GGG + chr5_2:53530207-53530226 None:intergenic 50.0%
CACAGAAGCAGTAGAGAGAC+TGG + chr5_2:53530318-53530337 None:intergenic 50.0%
CAGTCTCTCTACTGCTTCTG+TGG - chr5_2:53530316-53530335 Msa0776060:intron 50.0%
CAAATCTGCCACCAGGATTC+AGG - chr5_2:53530390-53530409 Msa0776060:intron 50.0%
AAGGGCTTCACCAAGCAACA+AGG + chr5_2:53530475-53530494 None:intergenic 50.0%
GCCCAGCTATCACATCCATA+TGG + chr5_2:53530664-53530683 None:intergenic 50.0%
GCCTTCAGCTTGTCAACTTC+AGG + chr5_2:53530719-53530738 None:intergenic 50.0%
AGGCCAAGTTTATTGCTGGG+CGG - chr5_2:53530735-53530754 Msa0776060:intron 50.0%
GATCCGCCCAGCAATAAACT+TGG + chr5_2:53530741-53530760 None:intergenic 50.0%
AAAGAGGGGCAGTGCTAAGT+TGG + chr5_2:53530873-53530892 None:intergenic 50.0%
TGGCTCAGCCATGGAAAAGA+GGG + chr5_2:53530888-53530907 None:intergenic 50.0%
! TTGATGACCTTTGCCGGAAC+TGG + chr5_2:53530908-53530927 None:intergenic 50.0%
TCAAGAAGCTCCCTGAGAGT+AGG + chr5_2:53530983-53531002 None:intergenic 50.0%
CTCTCAGGGAGCTTCTTGAT+TGG - chr5_2:53530984-53531003 Msa0776060:CDS 50.0%
! GGAGCTTCTTGATTGGCTGA+AGG - chr5_2:53530991-53531010 Msa0776060:CDS 50.0%
! GTTGTTGTGGCTTGTGAGGA+TGG - chr5_2:53531169-53531188 Msa0776060:intron 50.0%
!! GCCTGAAGGCACTACGAATA+AGG + chr5_2:53531314-53531333 None:intergenic 50.0%
ATTCGTAGTGCCTTCAGGCA+CGG - chr5_2:53531315-53531334 Msa0776060:intron 50.0%
CGACGCCGCAATCAAATTCC+CGG + chr5_2:53523081-53523100 None:intergenic 55.0%
!! AGCAGGCAGCTTGCTGTGTA+TGG - chr5_2:53523152-53523171 Msa0776060:CDS 55.0%
!! GGCAGCTTGCTGTGTATGGT+AGG - chr5_2:53523156-53523175 Msa0776060:CDS 55.0%
! GTTCTTGTTTCCGGGATGCG+AGG - chr5_2:53523209-53523228 Msa0776060:CDS 55.0%
!! CGAGGACTTGGTGCTGAGAT+TGG - chr5_2:53523227-53523246 Msa0776060:CDS 55.0%
GGCTTCTGTCAGTAAGCTGC+AGG - chr5_2:53525059-53525078 Msa0776060:intron 55.0%
CACACAGGCCAAACAACCAC+AGG - chr5_2:53527939-53527958 Msa0776060:intron 55.0%
CTTCCTCTGAACCAGCGACA+GGG + chr5_2:53528107-53528126 None:intergenic 55.0%
TCTTCCTCTGAACCAGCGAC+AGG + chr5_2:53528108-53528127 None:intergenic 55.0%
CCACCAAACATGGCAGCCAT+AGG + chr5_2:53528252-53528271 None:intergenic 55.0%
CCTATGGCTGCCATGTTTGG+TGG - chr5_2:53528249-53528268 Msa0776060:intron 55.0%
GGGATTGTTGTGCAGGCAGA+GGG + chr5_2:53528753-53528772 None:intergenic 55.0%
AGGGATTGTTGTGCAGGCAG+AGG + chr5_2:53528754-53528773 None:intergenic 55.0%
CCGCGATTGGAATATTGGCC+AGG - chr5_2:53529310-53529329 Msa0776060:intron 55.0%
AGCAGCTGTTGCAGCAACTG+TGG + chr5_2:53529342-53529361 None:intergenic 55.0%
ATCGAGCCCAAGTCAAGCAG+TGG + chr5_2:53529682-53529701 None:intergenic 55.0%
! ATGCTGGTGATGCTCAGGCA+AGG - chr5_2:53529789-53529808 Msa0776060:intron 55.0%
! TGCTGGTGATGCTCAGGCAA+GGG - chr5_2:53529790-53529809 Msa0776060:intron 55.0%
GGAGCGCGTTCTTGAATGCT+TGG - chr5_2:53529820-53529839 Msa0776060:intron 55.0%
! CTTGGACAAGGAGAAGTGCG+AGG - chr5_2:53529838-53529857 Msa0776060:intron 55.0%
AGGAGAACTGCAGTGGACGA+GGG + chr5_2:53530112-53530131 None:intergenic 55.0%
TCAGAGGAGGAGAACTGCAG+TGG + chr5_2:53530119-53530138 None:intergenic 55.0%
TTGGTATCCCTACCCCTGAC+TGG - chr5_2:53530192-53530211 Msa0776060:intron 55.0%
TGGTATCCCTACCCCTGACT+GGG - chr5_2:53530193-53530212 Msa0776060:intron 55.0%
TTGCGGTCAAATCTGCCACC+AGG - chr5_2:53530383-53530402 Msa0776060:intron 55.0%
GGCTTCATCCTGAATCCTGG+TGG + chr5_2:53530401-53530420 None:intergenic 55.0%
GCAGTTGAGGTTGCAATCGC+TGG + chr5_2:53530767-53530786 None:intergenic 55.0%
ACCTCAACTGCTATGGCCAC+TGG - chr5_2:53530776-53530795 Msa0776060:intron 55.0%
! GGGCAGTGCTAAGTTGGCAA+AGG + chr5_2:53530867-53530886 None:intergenic 55.0%
! AGCACTGCCCCTCTTTTCCA+TGG - chr5_2:53530877-53530896 Msa0776060:CDS 55.0%
GGCTCAGCCATGGAAAAGAG+GGG + chr5_2:53530887-53530906 None:intergenic 55.0%
CTGGCTCAGCCATGGAAAAG+AGG + chr5_2:53530889-53530908 None:intergenic 55.0%
TTCCATGGCTGAGCCAGTTC+CGG - chr5_2:53530892-53530911 Msa0776060:CDS 55.0%
GTTGGACTGTGTGGGACAGA+TGG - chr5_2:53530942-53530961 Msa0776060:CDS 55.0%
TCCTAGGCACAAAGAGCGGA+TGG - chr5_2:53531075-53531094 Msa0776060:CDS 55.0%
TCCATCCGCTCTTTGTGCCT+AGG + chr5_2:53531079-53531098 None:intergenic 55.0%
ATGTTTGTCGCCGTGCCTGA+AGG + chr5_2:53531328-53531347 None:intergenic 55.0%
!! GCGGCGTCGAGTATGGCTTT+TGG - chr5_2:53523092-53523111 Msa0776060:CDS 60.0%
GTTTCCGGGATGCGAGGACT+TGG - chr5_2:53523215-53523234 Msa0776060:CDS 60.0%
AGCACCAAGTCCTCGCATCC+CGG + chr5_2:53523222-53523241 None:intergenic 60.0%
CTGAACCAGCGACAGGGAAG+CGG + chr5_2:53528101-53528120 None:intergenic 60.0%
!! CTTCCCTGTCGCTGGTTCAG+AGG - chr5_2:53528101-53528120 Msa0776060:intron 60.0%
TATTGAGTTCGCCCCCTCCC+CGG - chr5_2:53528923-53528942 Msa0776060:intron 60.0%
GGCAGTTCCTCTTCCGCGAT+TGG - chr5_2:53529297-53529316 Msa0776060:intron 60.0%
CAGCAACTGTGGACTTCGCC+TGG + chr5_2:53529331-53529350 None:intergenic 60.0%
GAGGAGAACTGCAGTGGACG+AGG + chr5_2:53530113-53530132 None:intergenic 60.0%
GCCAGTGGCCATAGCAGTTG+AGG + chr5_2:53530780-53530799 None:intergenic 60.0%
CTCCAGACAGACAAGGCCAG+TGG + chr5_2:53530795-53530814 None:intergenic 60.0%
! GGATGGAGGGCACAAACTCG+AGG - chr5_2:53530829-53530848 Msa0776060:intron 60.0%
ATAGGCCGCTTCCCTGTCGC+TGG - chr5_2:53528093-53528112 Msa0776060:intron 65.0%
!! GGCCACTGGCCTTGTCTGTC+TGG - chr5_2:53530790-53530809 Msa0776060:intron 65.0%
! TGCCGGAACTGGCTCAGCCA+TGG + chr5_2:53530897-53530916 None:intergenic 65.0%
GGCTGAGCCAGTTCCGGCAA+AGG - chr5_2:53530898-53530917 Msa0776060:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 53522576 53531503 53522576 ID=Msa0776060;Name=Msa0776060
chr5_2 mRNA 53522576 53531503 53522576 ID=Msa0776060-mRNA-1;Parent=Msa0776060;Name=Msa0776060-mRNA-1;_AED=0.28;_eAED=0.28;_QI=147|1|1|1|0.83|0.71|7|263|1082
chr5_2 exon 53522576 53523435 53522576 ID=Msa0776060-mRNA-1:exon:16039;Parent=Msa0776060-mRNA-1
chr5_2 exon 53523643 53524075 53523643 ID=Msa0776060-mRNA-1:exon:16038;Parent=Msa0776060-mRNA-1
chr5_2 exon 53524185 53525053 53524185 ID=Msa0776060-mRNA-1:exon:16037;Parent=Msa0776060-mRNA-1
chr5_2 exon 53525750 53526544 53525750 ID=Msa0776060-mRNA-1:exon:16036;Parent=Msa0776060-mRNA-1
chr5_2 exon 53528927 53529144 53528927 ID=Msa0776060-mRNA-1:exon:16035;Parent=Msa0776060-mRNA-1
chr5_2 exon 53530831 53531180 53530831 ID=Msa0776060-mRNA-1:exon:16034;Parent=Msa0776060-mRNA-1
chr5_2 exon 53531370 53531503 53531370 ID=Msa0776060-mRNA-1:exon:16033;Parent=Msa0776060-mRNA-1
chr5_2 five_prime_UTR 53531370 53531503 53531370 ID=Msa0776060-mRNA-1:five_prime_utr;Parent=Msa0776060-mRNA-1
chr5_2 five_prime_UTR 53531168 53531180 53531168 ID=Msa0776060-mRNA-1:five_prime_utr;Parent=Msa0776060-mRNA-1
chr5_2 CDS 53530831 53531167 53530831 ID=Msa0776060-mRNA-1:cds;Parent=Msa0776060-mRNA-1
chr5_2 CDS 53528927 53529144 53528927 ID=Msa0776060-mRNA-1:cds;Parent=Msa0776060-mRNA-1
chr5_2 CDS 53525750 53526544 53525750 ID=Msa0776060-mRNA-1:cds;Parent=Msa0776060-mRNA-1
chr5_2 CDS 53524185 53525053 53524185 ID=Msa0776060-mRNA-1:cds;Parent=Msa0776060-mRNA-1
chr5_2 CDS 53523643 53524075 53523643 ID=Msa0776060-mRNA-1:cds;Parent=Msa0776060-mRNA-1
chr5_2 CDS 53522839 53523435 53522839 ID=Msa0776060-mRNA-1:cds;Parent=Msa0776060-mRNA-1
chr5_2 three_prime_UTR 53522576 53522838 53522576 ID=Msa0776060-mRNA-1:three_prime_utr;Parent=Msa0776060-mRNA-1
Gene Sequence

>Msa0776060

ATGCTTCCAAAAAAGAGACTTAGTGAAGGAGAAGTTGTTGTAGAAGAACCGATTAACAACAACAGCAACAGCGACTTAGGTTCAGTTAAGAAGGTGCGGAACGGTGAATCGACCGTGAACGAGAGTGACAAGAGTTTCAGTAGCAGCGGCGATAACAATAACAGTACCGGGAATTTGATTGCGGCGTCGAGTATGGCTTTTGGAAATTCTAACTCGCAGGAGATTGATGAGGATCTGCATAGCAGGCAGCTTGCTGTGTATGGTAGGGAGACTATGAGGAGGCTTTTCGCGAGTAGTGTTCTTGTTTCCGGGATGCGAGGACTTGGTGCTGAGATTGCAAAGAATCTTATTCTTGCTGGTGTAAAATCTGTAACCTTGCACGATGAAGGGACTGTAGAGTTATGGGATTTGTCCAGCAACTTTGTGTTTTCAGAAAATGATCTTGGTAAAAACAGGGCAGTGGCTTCTGTCAGTAAGCTGCAGGAACTCAATAACGCAGTGCTTGTACTAAGCTTGACAACTAAGCTGACCAAAGAACAACTTTCTAATTTCCAGGCTGTTGTTTTTACTGAAGTCAGTCTTGAGAAAGCTGTTGAGTTCAATGATTACTGCCACAGTCATCAGCCTCCAATTGCTTTTATTAAAACTGAAGTTAGAGGTCTTTTTGGTTCCGTGTTTTGTGATTTTGGGCCTGAGTTTACTGTTGTTGATGTCGATGGAGAGGAACCACATACTGGAATAATTGCGTCCATCAGCAATGACAACCCTGCTCTAGTTTCTTGTGTTGATGATGAGAGACTTGAGTTTCAGGATGGAGACCTTGTTGTATTCTCTGAAGTTCATGGTATGAAAGAGTTGAATGACGGAAAGCCAAGAAAGATTAAAAATGCTAGAGCATATTCATTCACTCTTGAAGAAGACACCACAAACTATGGTGCCTATGAAAAAGGTGGTATTGTCACACAGGCCAAACAACCACAGGTTTTGAACTTCAAACCTCTAAGGGAAGCACTCAATGATCCAGGCGAATTTCTTCTTAGCGATTTTTCTAAGTTTGACCGCCCACCTATACTGCATCTAGCATTCCAGGCTCTGGATAAGTTCATTTCTGAGATAGGCCGCTTCCCTGTCGCTGGTTCAGAGGAAGATGCACATAAATTCATTTCTATCGCCAATAATATTAATGGTAACTTAGGTGATGGAAGGTTGGAAGATGTGAATCCCAAGCTTCTACAGCAATTTGCCTTTGGTGCTAGGGCAGTATTGAACCCTATGGCTGCCATGTTTGGTGGAATTGTAGGACAAGAGGTTGTCAAAGCATGCTCTGGCAAATTTCATCCACTGTTTCAGTTTTTCTATTTCGACTCTGTGGAATCACTTCCTACAGAACCATTGCATCCTAATGATTTAAAACCAATAAATAGTCGTTACGATGCTCAGATTTCAGTTTTTGGGCAAAAGTTACAGAAGAAATTTGAAGATGCTAAAGTGTTTGTTGTTGGATCTGGTGCACTGGGATGTGAATTTTTAAAGAATCTTGCCTTAATGGGAGTTTCTTGTGGAGGTCAAGGGAAGCTTACAGTCACTGATGATGATGTCATAGAGAAGAGTAACTTAAGCAGGCAGTTCCTCTTCCGCGATTGGAATATTGGCCAGGCGAAGTCCACAGTTGCTGCAACAGCTGCTGAATCTATAAACCCTCAACTAAATATTGAAGCTCTGCAGAACCGTGTTAGCTCTGAAACTGAAAATGTGTTTCATGATACCTTTTGGGAAAACTTGAGTGTTGTGATTAATGCACTAGATAATGTGAATGCAAGACTATACGTGGATCAGCGATGCCTATATTTCCAGAAACCACTTCTTGAATCTGGAACTCTTGGAGCTAAATGCAATACCCAGATGGTCATTCCCCACCTAACAGAAAACTATGGTGCCTCAAGAGATCCCCCTGAGAAACAAGCACCGATGTGTACTGTTCATTCATTTCCACACAACATTGACCACTGCTTGACTTGGGCTCGATCAGAGTTTGAGGGTTTGCTTGAGAAAACTCCAGCTGAAGTAAATGCATATTTATCCAACCCAAGTGAATATACTAATGCTATGAAGAATGCTGGTGATGCTCAGGCAAGGGATAATTTGGAGCGCGTTCTTGAATGCTTGGACAAGGAGAAGTGCGAGGCTTTTGAAGATTGTATTACTTGGGCCAGGCTTAAGTTTGAAGATTATTTTGCTAACCGAGTGAAGCAGTTAGCTTATACTTTTCCTGAGGATGCTGCAACTAGTACTGGAGCTCCATTTTGGTCTGCACCGAAACGATTCCCTCGTCCACTGCAGTTCTCCTCCTCTGATCCAAGTCATCTCCAGTTTCTGATGGCAGCCTCTATACTACGCGCAGAAACATTTGGTATCCCTACCCCTGACTGGGTGAAAAACCCTATAAAGTTGGCAGAAGTTATTGATAGAATGATAGTACCTGACTTTCAGCCAAAGAAGGATGCAAAAATAGTGACAGATGAGAAGGCAACCAGTCTCTCTACTGCTTCTGTGGATGATGCCGTTGTTATTGATGATCTAATTGTCAAGTTAGAGAGATTGCGGTCAAATCTGCCACCAGGATTCAGGATGAAGCCAATCCAGTTTGAGAAGGATGATGATACAAATTACCATATGGATGTGATAGCTGGGCTTGCCAACATGAGAGCACGCAATTACAGCATTCCTGAAGTTGACAAGCTGAAGGCCAAGTTTATTGCTGGGCGGATCATTCCAGCGATTGCAACCTCAACTGCTATGGCCACTGGCCTTGTCTGTCTGGAGTTTTACAAAGCTTTGGATGGAGGGCACAAACTCGAGGACTACCGAAACACCTTTGCCAACTTAGCACTGCCCCTCTTTTCCATGGCTGAGCCAGTTCCGGCAAAGGTCATCAAGCATCAAGATTTGAGTTGGACTGTGTGGGACAGATGGATTATAAAAGACAATCCTACTCTCAGGGAGCTTCTTGATTGGCTGAAGGAAAAAGGTTTGAATGCTTATAGTATTTCTTGTGGAAGTTGCCTGCTTTTCAATAGCATGTTTCCTAGGCACAAAGAGCGGATGGACAAAAAAGTTGTAGATTTAGCAAGGGATATTGCCAAGATGGAAATCCCTTCATACCGTCGTCACATAGATGTTGTTGTGGCTTGTGAGGATGGCGATGATAATGACATTGATATCCCTCAAGTATCCATTTATTTCCGTTGA
Protein sequence

>Msa0776060

MLPKKRLSEGEVVVEEPINNNSNSDLGSVKKVRNGESTVNESDKSFSSSGDNNNSTGNLIAASSMAFGNSNSQEIDEDLHSRQLAVYGRETMRRLFASSVLVSGMRGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSENDLGKNRAVASVSKLQELNNAVLVLSLTTKLTKEQLSNFQAVVFTEVSLEKAVEFNDYCHSHQPPIAFIKTEVRGLFGSVFCDFGPEFTVVDVDGEEPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMKELNDGKPRKIKNARAYSFTLEEDTTNYGAYEKGGIVTQAKQPQVLNFKPLREALNDPGEFLLSDFSKFDRPPILHLAFQALDKFISEIGRFPVAGSEEDAHKFISIANNINGNLGDGRLEDVNPKLLQQFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLFQFFYFDSVESLPTEPLHPNDLKPINSRYDAQISVFGQKLQKKFEDAKVFVVGSGALGCEFLKNLALMGVSCGGQGKLTVTDDDVIEKSNLSRQFLFRDWNIGQAKSTVAATAAESINPQLNIEALQNRVSSETENVFHDTFWENLSVVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPSEYTNAMKNAGDAQARDNLERVLECLDKEKCEAFEDCITWARLKFEDYFANRVKQLAYTFPEDAATSTGAPFWSAPKRFPRPLQFSSSDPSHLQFLMAASILRAETFGIPTPDWVKNPIKLAEVIDRMIVPDFQPKKDAKIVTDEKATSLSTASVDDAVVIDDLIVKLERLRSNLPPGFRMKPIQFEKDDDTNYHMDVIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLEFYKALDGGHKLEDYRNTFANLALPLFSMAEPVPAKVIKHQDLSWTVWDRWIIKDNPTLRELLDWLKEKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLARDIAKMEIPSYRRHIDVVVACEDGDDNDIDIPQVSIYFR*