AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0777180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777180 MtrunA17_Chr5g0432441 87.730 326 7 1 1 293 1 326 0.0 571
Msa0777180 MtrunA17_Chr3g0106921 63.208 318 83 2 9 293 4 320 4.58e-142 402
Msa0777180 MtrunA17_Chr3g0129051 57.538 325 98 5 3 293 4 322 4.83e-123 354
Msa0777180 MtrunA17_Chr5g0438021 55.873 315 104 3 12 293 13 325 1.10e-117 341
Msa0777180 MtrunA17_Chr4g0013171 54.799 323 109 4 5 293 2 321 1.70e-110 322
Msa0777180 MtrunA17_Chr3g0129061 56.913 311 98 4 17 293 14 322 5.11e-110 321
Msa0777180 MtrunA17_Chr3g0129041 56.913 311 98 4 17 293 14 322 1.69e-107 315
Msa0777180 MtrunA17_Chr4g0013201 53.000 300 104 3 27 293 43 338 1.46e-106 313
Msa0777180 MtrunA17_Chr4g0013191 51.948 308 108 5 22 293 37 340 1.19e-104 308
Msa0777180 MtrunA17_Chr4g0038161 50.158 317 121 3 12 293 6 320 1.38e-104 307
Msa0777180 MtrunA17_Chr4g0013181 56.610 295 91 4 33 293 62 353 5.08e-103 305
Msa0777180 MtrunA17_Chr4g0038151 50.313 320 117 5 12 293 6 321 5.82e-103 303
Msa0777180 MtrunA17_Chr4g0043391 50.000 318 121 4 12 293 9 324 2.96e-102 301
Msa0777180 MtrunA17_Chr2g0320071 50.955 314 115 4 15 293 8 317 1.17e-101 300
Msa0777180 MtrunA17_Chr4g0038171 50.159 315 119 4 15 293 9 321 1.33e-101 300
Msa0777180 MtrunA17_Chr7g0244461 50.794 315 111 4 12 293 9 312 1.75e-101 299
Msa0777180 MtrunA17_Chr3g0114451 51.411 319 111 5 15 293 4 318 1.91e-101 299
Msa0777180 MtrunA17_Chr2g0320101 51.171 299 109 3 28 293 23 317 1.47e-98 292
Msa0777180 MtrunA17_Chr7g0244451 51.935 310 112 3 17 293 11 316 3.67e-98 291
Msa0777180 MtrunA17_Chr5g0432351 50.311 322 114 9 13 293 5 321 8.20e-98 290
Msa0777180 MtrunA17_Chr5g0432341 50.625 320 112 9 15 293 7 321 1.51e-97 290
Msa0777180 MtrunA17_Chr5g0432401 54.209 297 119 8 1 292 1 285 2.18e-97 288
Msa0777180 MtrunA17_Chr3g0106901 51.582 316 116 3 11 293 12 323 2.31e-97 289
Msa0777180 MtrunA17_Chr5g0432331 49.091 330 125 9 2 293 28 352 3.74e-96 287
Msa0777180 MtrunA17_Chr2g0320091 49.201 313 122 4 15 293 9 318 4.12e-95 283
Msa0777180 MtrunA17_Chr2g0320061 49.062 320 124 5 9 293 3 318 4.33e-94 281
Msa0777180 MtrunA17_Chr1g0213061 46.809 329 131 6 1 293 1 321 2.10e-93 279
Msa0777180 MtrunA17_Chr2g0320031 48.580 317 123 5 13 293 7 319 2.48e-92 276
Msa0777180 MtrunA17_Chr2g0320051 49.667 300 113 4 28 293 23 318 9.15e-92 275
Msa0777180 MtrunA17_Chr3g0107881 47.335 319 126 6 13 293 10 324 3.05e-91 273
Msa0777180 MtrunA17_Chr7g0224371 48.485 330 125 8 1 293 1 322 3.55e-91 273
Msa0777180 MtrunA17_Chr5g0402571 45.820 323 131 3 11 293 8 326 6.53e-90 270
Msa0777180 MtrunA17_Chr5g0402581 45.511 323 132 3 11 293 8 326 1.18e-89 270
Msa0777180 MtrunA17_Chr1g0175561 44.681 329 135 5 8 293 2 326 5.11e-86 260
Msa0777180 MtrunA17_Chr5g0404721 47.213 305 116 5 30 293 30 330 2.16e-84 256
Msa0777180 MtrunA17_Chr7g0258811 43.963 323 132 6 15 293 54 371 5.75e-84 256
Msa0777180 MtrunA17_Chr4g0070951 45.820 323 130 7 13 293 10 329 3.59e-82 251
Msa0777180 MtrunA17_Chr2g0292101 43.210 324 138 5 12 293 7 326 5.01e-81 248
Msa0777180 MtrunA17_Chr2g0292091 42.813 327 141 5 9 293 3 325 7.18e-81 248
Msa0777180 MtrunA17_Chr8g0372601 46.254 307 120 5 28 293 28 330 7.29e-81 247
Msa0777180 MtrunA17_Chr2g0299691 45.455 330 126 6 12 293 35 358 3.62e-80 246
Msa0777180 MtrunA17_Chr1g0155611 46.732 306 117 5 30 293 46 347 7.65e-80 245
Msa0777180 MtrunA17_Chr4g0068621 46.230 305 121 4 28 293 36 336 2.35e-79 244
Msa0777180 MtrunA17_Chr2g0292251 44.590 305 129 4 28 293 26 329 1.13e-76 237
Msa0777180 MtrunA17_Chr2g0292241 43.465 329 138 6 8 293 7 330 8.09e-76 235
Msa0777180 MtrunA17_Chr2g0292211 43.385 325 135 7 13 293 22 341 1.15e-75 235
Msa0777180 MtrunA17_Chr2g0292151 43.072 332 143 4 4 293 3 330 1.85e-75 234
Msa0777180 MtrunA17_Chr5g0400331 45.277 307 124 4 30 293 26 331 5.17e-75 232
Msa0777180 MtrunA17_Chr2g0292181 42.547 322 139 4 14 293 22 339 2.18e-74 232
Msa0777180 MtrunA17_Chr2g0291751 43.168 322 137 4 14 293 13 330 2.90e-74 231
Msa0777180 MtrunA17_Chr5g0421411 43.986 291 110 7 50 293 1 285 1.10e-73 228
Msa0777180 MtrunA17_Chr2g0292111 42.814 334 144 7 3 293 1 330 1.36e-72 227
Msa0777180 MtrunA17_Chr4g0013721 42.532 308 136 6 23 293 93 396 3.45e-72 228
Msa0777180 MtrunA17_Chr2g0292271 41.692 331 142 6 8 293 6 330 6.42e-72 225
Msa0777180 MtrunA17_Chr4g0013821 40.777 309 130 7 28 293 26 324 4.64e-69 218
Msa0777180 MtrunA17_Chr2g0292291 39.169 337 151 6 4 293 3 332 8.51e-69 217
Msa0777180 MtrunA17_Chr2g0292261 40.123 324 144 5 14 293 13 330 3.45e-67 213
Msa0777180 MtrunA17_Chr6g0477071 38.983 295 147 5 28 293 52 342 2.03e-65 208
Msa0777180 MtrunA17_Chr2g0322861 39.117 317 151 7 16 293 73 386 9.03e-65 208
Msa0777180 MtrunA17_Chr1g0188431 36.254 331 169 5 1 293 1 327 1.49e-64 205
Msa0777180 MtrunA17_Chr4g0024121 35.962 317 163 5 15 293 12 326 4.12e-64 204
Msa0777180 MtrunA17_Chr1g0194151 36.310 336 168 4 1 293 1 333 5.44e-62 199
Msa0777180 MtrunA17_Chr1g0164891 39.274 303 138 5 34 293 93 392 5.96e-61 198
Msa0777180 MtrunA17_Chr1g0204011 36.760 321 159 7 11 293 8 322 8.53e-61 196
Msa0777180 MtrunA17_Chr6g0460711 35.849 318 166 4 10 293 1 314 1.92e-60 194
Msa0777180 MtrunA17_Chr7g0225221 39.938 323 144 8 12 293 7 320 2.06e-60 194
Msa0777180 MtrunA17_Chr2g0279041 37.462 331 152 9 9 293 4 325 4.76e-60 194
Msa0777180 MtrunA17_Chr3g0128061 36.728 324 162 3 10 293 6 326 5.37e-60 194
Msa0777180 MtrunA17_Chr4g0046131 38.905 347 149 9 1 289 1 342 8.13e-59 191
Msa0777180 MtrunA17_Chr1g0157051 37.539 317 147 7 15 289 7 314 2.75e-58 189
Msa0777180 MtrunA17_Chr7g0254201 36.242 298 153 4 26 290 16 309 2.40e-57 186
Msa0777180 MtrunA17_Chr5g0405991 36.593 317 151 7 17 293 10 316 4.80e-57 186
Msa0777180 MtrunA17_Chr6g0467161 39.203 301 137 7 30 293 45 336 9.66e-57 186
Msa0777180 MtrunA17_Chr4g0063671 35.890 326 152 8 13 293 7 320 1.66e-55 182
Msa0777180 MtrunA17_Chr4g0076211 37.415 294 143 7 35 293 46 333 5.36e-55 181
Msa0777180 MtrunA17_Chr2g0296621 36.455 299 148 6 30 293 50 341 8.35e-55 181
Msa0777180 MtrunA17_Chr8g0371381 35.922 309 138 8 30 293 26 319 1.33e-53 177
Msa0777180 MtrunA17_Chr7g0268501 35.404 322 160 8 9 293 10 320 4.12e-53 176
Msa0777180 MtrunA17_Chr7g0268521 35.404 322 160 8 9 293 10 320 4.12e-53 176
Msa0777180 MtrunA17_Chr7g0254231 33.333 294 162 3 30 293 22 311 1.81e-52 174
Msa0777180 MtrunA17_Chr6g0451571 35.000 320 163 8 17 293 17 334 1.02e-51 172
Msa0777180 MtrunA17_Chr2g0316791 35.135 333 145 9 28 291 74 404 1.76e-51 174
Msa0777180 MtrunA17_Chr2g0278671 36.478 318 144 8 23 293 17 323 1.60e-50 169
Msa0777180 MtrunA17_Chr8g0364291 35.312 320 167 5 13 293 6 324 8.98e-50 167
Msa0777180 MtrunA17_Chr1g0197411 33.127 323 171 7 15 293 9 330 6.65e-49 165
Msa0777180 MtrunA17_Chr6g0467251 32.927 328 177 7 1 289 1 324 7.17e-49 166
Msa0777180 MtrunA17_Chr2g0316831 34.835 333 146 9 28 291 110 440 9.31e-49 167
Msa0777180 MtrunA17_Chr4g0053871 36.364 319 155 9 12 289 9 320 2.37e-48 163
Msa0777180 MtrunA17_Chr2g0279061 38.846 260 106 7 74 289 12 262 1.10e-46 157
Msa0777180 MtrunA17_Chr4g0074851 31.464 321 181 4 10 293 10 328 1.11e-46 159
Msa0777180 MtrunA17_Chr4g0072091 37.785 307 143 11 29 293 23 323 2.22e-46 158
Msa0777180 MtrunA17_Chr5g0401431 34.277 318 158 8 17 289 14 325 4.96e-46 157
Msa0777180 MtrunA17_Chr3g0136751 31.056 322 178 6 11 293 6 322 1.22e-45 156
Msa0777180 MtrunA17_Chr5g0413051 31.270 307 168 4 29 293 72 377 1.74e-45 157
Msa0777180 MtrunA17_Chr4g0075241 31.894 301 168 4 29 293 28 327 4.61e-45 155
Msa0777180 MtrunA17_Chr6g0467121 34.797 296 155 7 30 293 74 363 2.63e-44 154
Msa0777180 MtrunA17_Chr1g0181431 31.457 302 170 3 27 293 24 323 5.33e-44 152
Msa0777180 MtrunA17_Chr2g0329641 33.225 307 157 7 29 293 35 335 6.55e-44 152
Msa0777180 MtrunA17_Chr1g0181481 32.558 301 166 3 28 293 25 323 8.68e-44 152
Msa0777180 MtrunA17_Chr3g0114461 45.312 192 67 4 136 293 5 192 1.94e-43 147
Msa0777180 MtrunA17_Chr3g0114491 61.607 112 43 0 29 140 17 128 2.30e-43 145
Msa0777180 MtrunA17_Chr1g0148021 32.110 327 179 5 9 293 3 328 7.21e-43 149
Msa0777180 MtrunA17_Chr1g0181511 32.226 301 167 6 28 293 25 323 2.16e-42 148
Msa0777180 MtrunA17_Chr2g0311251 32.635 334 153 11 28 292 9 339 2.41e-41 145
Msa0777180 MtrunA17_Chr1g0194271 40.860 186 107 2 8 191 8 192 7.39e-41 144
Msa0777180 MtrunA17_Chr1g0194271 47.727 88 45 1 206 293 254 340 5.34e-16 77.0
Msa0777180 MtrunA17_Chr2g0316811 44.848 165 87 3 28 190 48 210 9.60e-40 141
Msa0777180 MtrunA17_Chr2g0316481 45.455 165 86 3 28 190 74 236 3.03e-39 142
Msa0777180 MtrunA17_Chr2g0316141 34.328 268 122 8 76 291 11 276 4.12e-39 138
Msa0777180 MtrunA17_Chr2g0316181 34.328 268 122 8 76 291 11 276 4.12e-39 138
Msa0777180 MtrunA17_Chr2g0316191 45.455 165 86 3 28 190 74 236 7.62e-39 140
Msa0777180 MtrunA17_Chr2g0311241 36.408 206 85 5 28 190 58 260 3.12e-31 120
Msa0777180 MtrunA17_Chr2g0292281 37.811 201 95 4 122 293 17 216 1.01e-27 107
Msa0777180 MtrunA17_Chr5g0432361 53.191 94 41 2 201 292 16 108 1.68e-26 100
Msa0777180 MtrunA17_Chr6g0468731 64.286 70 21 2 69 138 22 87 5.88e-23 90.5
Msa0777180 MtrunA17_Chr4g0004591 32.716 162 69 2 30 191 77 198 7.98e-22 94.0
Msa0777180 MtrunA17_Chr4g0004591 39.726 73 43 1 220 292 284 355 9.91e-11 61.6
Msa0777180 MtrunA17_Chr1g0181501 28.947 190 100 2 138 293 1 189 1.83e-18 81.6
Msa0777180 MtrunA17_Chr1g0181491 37.273 110 67 2 28 137 10 117 6.18e-17 76.3
Msa0777180 MtrunA17_Chr1g0196191 54.286 70 31 1 68 137 23 91 2.70e-16 74.7
Msa0777180 MtrunA17_Chr3g0104101 40.385 104 50 4 197 293 51 149 5.37e-16 73.6
Msa0777180 MtrunA17_Chr7g0254181 40.217 92 51 2 100 191 29 116 1.06e-14 70.5
Msa0777180 MtrunA17_Chr5g0423911 40.299 67 40 0 223 289 1 67 2.28e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777180 AT5G58390.1 58.654 312 95 2 15 293 6 316 2.65e-117 340
Msa0777180 AT5G05340.1 58.194 299 90 3 28 293 28 324 1.23e-116 338
Msa0777180 AT5G58400.1 55.096 314 107 2 13 293 13 325 2.37e-116 338
Msa0777180 AT1G14550.1 49.211 317 120 4 15 293 8 321 2.68e-97 289
Msa0777180 AT1G14540.1 46.082 319 133 4 10 293 1 315 3.16e-88 266
Msa0777180 AT5G06730.1 42.773 339 143 6 1 293 1 334 6.99e-87 264
Msa0777180 AT4G36430.1 46.130 323 126 7 13 293 14 330 1.12e-85 260
Msa0777180 AT5G06720.1 43.865 326 137 4 10 293 12 333 1.21e-85 260
Msa0777180 AT3G50990.1 46.926 309 119 6 26 293 37 341 1.27e-84 258
Msa0777180 AT5G66390.1 46.129 310 122 5 25 293 28 333 2.40e-84 257
Msa0777180 AT1G44970.1 43.714 350 134 7 3 293 1 346 3.32e-83 254
Msa0777180 AT2G18150.1 46.844 301 115 5 34 293 40 336 2.83e-82 251
Msa0777180 AT4G16270.1 46.644 298 118 5 34 293 54 348 3.62e-79 244
Msa0777180 AT1G49570.1 45.277 307 123 4 25 289 43 346 9.87e-79 243
Msa0777180 AT2G18140.1 45.033 302 121 5 33 293 38 335 2.49e-77 239
Msa0777180 AT4G08770.1 43.810 315 123 6 26 293 20 327 1.57e-76 237
Msa0777180 AT2G38390.1 42.581 310 129 5 28 293 29 333 5.57e-76 236
Msa0777180 AT5G19890.1 43.119 327 132 6 11 293 11 327 2.24e-75 233
Msa0777180 AT1G68850.1 38.690 336 144 7 16 293 4 335 6.47e-75 233
Msa0777180 AT5G19880.1 42.547 322 134 6 17 293 14 329 6.89e-75 232
Msa0777180 AT4G08780.1 42.857 315 126 6 26 293 20 327 1.87e-74 232
Msa0777180 AT2G35380.1 42.136 337 149 7 1 293 1 335 8.98e-74 230
Msa0777180 AT2G38380.1 42.581 310 129 6 28 293 29 333 1.40e-73 229
Msa0777180 AT3G32980.1 41.401 314 132 5 26 293 27 334 6.44e-73 228
Msa0777180 AT3G49110.1 41.441 333 137 6 8 293 15 336 1.11e-72 228
Msa0777180 AT3G49120.1 41.401 314 132 5 26 293 28 335 2.15e-71 224
Msa0777180 AT3G01190.1 39.048 315 149 8 17 293 12 321 1.13e-66 211
Msa0777180 AT2G22420.1 38.871 319 154 6 11 293 6 319 5.10e-66 209
Msa0777180 AT3G03670.1 37.107 318 161 6 13 293 6 321 5.24e-65 207
Msa0777180 AT4G33420.1 38.486 317 160 5 8 293 13 325 8.65e-63 201
Msa0777180 AT1G05260.1 37.812 320 149 7 17 293 13 325 1.75e-62 200
Msa0777180 AT4G11290.1 35.802 324 164 5 13 293 4 326 2.67e-62 200
Msa0777180 AT4G33420.2 38.486 317 160 5 8 293 60 372 2.77e-62 201
Msa0777180 AT5G51890.1 36.646 322 157 7 12 293 8 322 3.87e-62 199
Msa0777180 AT5G17820.1 36.943 314 158 6 13 293 7 313 4.06e-62 199
Msa0777180 AT1G71695.1 38.538 301 143 4 30 293 44 339 1.20e-61 199
Msa0777180 AT5G17820.2 36.943 314 158 6 13 293 60 366 3.85e-61 198
Msa0777180 AT5G15180.1 35.135 333 170 9 3 293 1 329 1.41e-59 193
Msa0777180 AT4G26010.2 35.873 315 169 4 5 290 24 334 4.60e-59 192
Msa0777180 AT4G26010.1 36.513 304 160 4 16 290 7 306 5.92e-59 191
Msa0777180 AT2G41480.1 35.119 336 158 10 8 293 3 328 4.81e-57 186
Msa0777180 AT5G40150.1 35.526 304 153 6 28 293 30 328 5.59e-57 186
Msa0777180 AT5G42180.1 36.624 314 156 6 15 291 8 315 7.82e-57 186
Msa0777180 AT1G05240.1 37.124 299 146 7 30 289 26 321 1.31e-56 185
Msa0777180 AT1G05250.1 37.124 299 146 7 30 289 26 321 1.31e-56 185
Msa0777180 AT3G21770.1 36.452 310 155 7 22 292 21 327 1.34e-56 185
Msa0777180 AT3G28200.1 34.983 303 155 6 28 293 19 316 1.39e-56 185
Msa0777180 AT5G64120.1 34.951 309 151 6 25 293 30 328 3.55e-56 184
Msa0777180 AT5G14130.1 36.306 314 161 5 17 293 19 330 3.86e-56 184
Msa0777180 AT5G14130.2 35.385 325 171 5 6 293 49 371 1.28e-55 184
Msa0777180 AT1G77100.1 34.783 322 170 7 8 293 2 319 8.27e-55 181
Msa0777180 AT4G17690.1 37.458 299 150 6 30 293 26 322 1.05e-53 178
Msa0777180 AT5G47000.1 35.535 318 166 6 12 293 16 330 4.17e-53 176
Msa0777180 AT1G34510.1 35.161 310 163 4 12 293 10 309 1.13e-52 175
Msa0777180 AT2G24800.1 35.948 306 151 5 28 293 29 329 1.91e-52 174
Msa0777180 AT5G39580.1 35.294 323 157 7 13 293 7 319 2.40e-52 174
Msa0777180 AT1G30870.1 37.134 307 138 7 30 293 51 345 2.08e-51 172
Msa0777180 AT2G35380.2 43.265 245 95 5 92 293 4 247 2.63e-51 169
Msa0777180 AT5G67400.1 35.691 311 149 7 24 289 21 325 5.87e-50 168
Msa0777180 AT4G31760.1 32.523 329 178 5 4 293 3 326 1.60e-49 167
Msa0777180 AT4G37530.1 37.143 315 141 9 23 289 20 325 3.34e-49 166
Msa0777180 AT3G49960.1 34.783 322 157 8 13 289 12 325 4.55e-49 166
Msa0777180 AT5G64110.1 36.280 328 154 8 14 293 10 330 1.72e-48 164
Msa0777180 AT1G24110.1 33.956 321 168 7 15 293 4 322 1.76e-48 164
Msa0777180 AT4G25980.1 33.956 321 155 9 19 293 17 326 2.07e-48 164
Msa0777180 AT5G64100.1 34.868 304 143 7 33 293 40 331 4.84e-48 163
Msa0777180 AT4G37520.1 36.808 307 143 8 28 289 25 325 1.60e-47 162
Msa0777180 AT2G18980.1 34.472 322 156 8 17 293 12 323 3.88e-47 160
Msa0777180 AT4G37520.2 35.621 306 145 7 28 289 25 322 3.87e-46 158
Msa0777180 AT4G30170.1 35.831 307 150 8 28 293 25 325 1.22e-45 157
Msa0777180 AT4G21960.1 33.779 299 161 4 30 293 31 327 5.13e-45 155
Msa0777180 AT2G34060.1 34.853 307 151 7 29 290 41 343 2.02e-44 154
Msa0777180 AT5G22410.1 33.433 335 165 11 1 290 1 322 2.31e-42 148
Msa0777180 AT4G33870.1 42.857 175 96 3 18 190 54 226 5.29e-42 149
Msa0777180 AT2G24800.2 45.122 164 85 2 28 191 29 187 4.25e-40 140
Msa0777180 AT2G37130.1 30.719 306 164 7 29 293 29 327 5.43e-40 142
Msa0777180 AT2G37130.2 30.795 302 161 7 33 293 2 296 1.12e-39 140
Msa0777180 AT2G39040.1 33.010 309 160 7 29 293 45 350 3.00e-39 140
Msa0777180 AT5G24070.1 34.559 272 129 6 64 293 71 335 3.98e-39 140
Msa0777180 AT4G37530.2 37.313 268 111 9 23 242 20 278 4.88e-39 138
Msa0777180 AT4G25980.2 40.964 166 93 3 26 191 67 227 4.10e-38 136
Msa0777180 AT5G39580.2 42.222 180 97 4 13 191 7 180 4.75e-38 134
Msa0777180 AT2G43480.1 30.449 312 166 5 26 293 31 335 7.67e-37 134
Msa0777180 AT3G17070.1 28.808 302 177 3 30 293 38 339 1.13e-36 134
Msa0777180 AT3G17070.2 25.547 274 165 4 58 293 4 276 1.83e-23 97.4

Find 67 sgRNAs with CRISPR-Local

Find 687 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTCCACCTTAGACTTTA+TGG 0.119850 5_2:-56019725 None:intergenic
TTATCCAGGTTTCCTTTAAT+TGG 0.201465 5_2:-56028777 None:intergenic
TGCATTCTTCTCTCCTTTAT+TGG 0.219837 5_2:-56019659 None:intergenic
CAAGAATCTCATCAACAAAA+AGG 0.247712 5_2:+56028577 Msa0777180:CDS
TTGTCTAAGTCTTTAGGATT+AGG 0.293094 5_2:+56017745 None:intergenic
CCAAGTTTAACCTTCCAAAA+AGG 0.308795 5_2:-56027571 None:intergenic
TGTAGTATAAGTTATCAAAA+TGG 0.316765 5_2:-56028556 None:intergenic
GGAAATAACAAGCCTCTTAC+CGG 0.340680 5_2:+56028719 Msa0777180:CDS
CCTTATACTACTTAGCAAAA+TGG 0.343968 5_2:+56017845 Msa0777180:exon
AATGCAGGAGAGCCAATTAA+AGG 0.372028 5_2:+56028765 Msa0777180:CDS
CCCTTAGCAACCTTATCAAT+AGG 0.386741 5_2:+56027662 Msa0777180:CDS
CATTATATATAGAGATAATA+TGG 0.387093 5_2:-56017783 None:intergenic
GATCAAAAGGGGAGATTAGA+AGG 0.387743 5_2:+56028741 Msa0777180:CDS
TGCTACTGCAATGATTAAGA+TGG 0.388563 5_2:+56028697 Msa0777180:CDS
CATTGATGCCATAAAGTCTA+AGG 0.390648 5_2:+56019717 Msa0777180:CDS
TGGAGGATCTACTGATTCAT+TGG 0.391305 5_2:+56028631 Msa0777180:CDS
AAGGTTGCTAAGGGTGGAAA+AGG 0.395412 5_2:-56027653 None:intergenic
GAGCTTTAAACCTATTGATA+AGG 0.399870 5_2:-56027672 None:intergenic
GATGACACACCCTCCAATAA+AGG 0.400602 5_2:+56019646 Msa0777180:CDS
ACCTATTGATAAGGTTGCTA+AGG 0.414625 5_2:-56027663 None:intergenic
AAGCCTCTTACCGGATCAAA+AGG 0.417845 5_2:+56028728 Msa0777180:CDS
TTCTTCTCTCCTTTATTGGA+GGG 0.419465 5_2:-56019655 None:intergenic
ACCTCTCAAAGAATCTTTGT+TGG 0.427591 5_2:-56019686 None:intergenic
CCTCTCAAAGAATCTTTGTT+GGG 0.433102 5_2:-56019685 None:intergenic
GGAAGGTTAAACTTGGAAGA+AGG 0.441433 5_2:+56027578 Msa0777180:CDS
ATTCTTCTCTCCTTTATTGG+AGG 0.454303 5_2:-56019656 None:intergenic
GAAGGTTAAACTTGGAAGAA+GGG 0.455829 5_2:+56027579 Msa0777180:CDS
AAGTAGTATAAGGCTTTAGA+AGG 0.458660 5_2:-56017835 None:intergenic
TATAAGTTATCAAAATGGTT+TGG 0.466239 5_2:-56028551 None:intergenic
ATCAATAGGTTTAAAGCTCA+AGG 0.476560 5_2:+56027676 Msa0777180:CDS
ACTGTTTGCATCATTGAGGC+TGG 0.487052 5_2:-56027614 None:intergenic
GCTACTGCAATGATTAAGAT+GGG 0.493974 5_2:+56028698 Msa0777180:CDS
GGGAGATTAGAAGGCAATGC+AGG 0.503265 5_2:+56028750 Msa0777180:CDS
CCCAACAAAGATTCTTTGAG+AGG 0.507682 5_2:+56019685 Msa0777180:CDS
TAGTATAAGGCTTTAGAAGG+TGG 0.512062 5_2:-56017832 None:intergenic
CTAAGGGTGGAAAAGGGAGG+TGG 0.512202 5_2:-56027646 None:intergenic
AGCCTCTTACCGGATCAAAA+GGG 0.519613 5_2:+56028729 Msa0777180:CDS
TATTGATAACAGGGCTGTGA+TGG 0.525762 5_2:+56019610 Msa0777180:intron
CACCACTGTTTGCATCATTG+AGG 0.529112 5_2:-56027618 None:intergenic
CAAAGCAGTCATGAAAATGA+AGG 0.532001 5_2:-56018061 None:intergenic
AGCTCAAGGACTCTCTACTA+AGG 0.542515 5_2:+56027690 Msa0777180:CDS
AGGTTGCTAAGGGTGGAAAA+GGG 0.542574 5_2:-56027652 None:intergenic
CCTATTGATAAGGTTGCTAA+GGG 0.552353 5_2:-56027662 None:intergenic
AACAGAATCACGAGCAGCAA+TGG 0.556484 5_2:-56019785 None:intergenic
TCAGCACAAGAGACCACACC+GGG 0.558299 5_2:-56019754 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.559330 5_2:-56028604 None:intergenic
ATAAGGCTTTAGAAGGTGGA+TGG 0.563249 5_2:-56017828 None:intergenic
AGGAATTGTCCAAGGAAAAG+TGG 0.565194 5_2:+56028485 Msa0777180:CDS
TTGCTAAGGGTGGAAAAGGG+AGG 0.567320 5_2:-56027649 None:intergenic
ATTGATAAGGTTGCTAAGGG+TGG 0.575681 5_2:-56027659 None:intergenic
TATTTGCCAAGTCAAGGCAG+AGG 0.591700 5_2:+56028465 Msa0777180:intron
GCTAGAGAACCTCGCATGGG+AGG 0.612577 5_2:+56018026 Msa0777180:CDS
TAAGTCTTTAGGATTAGGTG+AGG 0.616809 5_2:+56017750 None:intergenic
CAAGGCAGAGGAATTGTCCA+AGG 0.617740 5_2:+56028477 Msa0777180:CDS
TGTTGCTAGAGAACCTCGCA+TGG 0.621286 5_2:+56018022 Msa0777180:CDS
GCCTCTTACCGGATCAAAAG+GGG 0.621930 5_2:+56028730 Msa0777180:CDS
TGATGCCATAAAGTCTAAGG+TGG 0.622773 5_2:+56019720 Msa0777180:CDS
AAGGTGGAGTCAGTATGCCC+CGG 0.647987 5_2:+56019736 Msa0777180:CDS
AGAAGAGATCCTCCCATGCG+AGG 0.655274 5_2:-56018035 None:intergenic
GTTGCTAGAGAACCTCGCAT+GGG 0.656226 5_2:+56018023 Msa0777180:CDS
AAGTCTTTAGGATTAGGTGA+GGG 0.660885 5_2:+56017751 None:intergenic
GGAGTCAGTATGCCCCGGTG+TGG 0.661070 5_2:+56019741 Msa0777180:CDS
AGGACTCTCTACTAAGGACA+TGG 0.666154 5_2:+56027696 Msa0777180:CDS
ATCAGCACAAGAGACCACAC+CGG 0.684464 5_2:-56019755 None:intergenic
AGCCTCAATGATGCAAACAG+TGG 0.715380 5_2:+56027616 Msa0777180:CDS
AGCAACAGCAGAGTGAACAA+CGG 0.720096 5_2:-56018006 None:intergenic
CAGCACAAGAGACCACACCG+GGG 0.839989 5_2:-56019753 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTATTATTATTTTTTT+TGG - chr5_2:56023942-56023961 None:intergenic 0.0%
!!! AGATTGAATATATTATTTTT+TGG + chr5_2:56018589-56018608 Msa0777180:intron 10.0%
!! AATTTATTAGATAAAGATTA+AGG - chr5_2:56019040-56019059 None:intergenic 10.0%
!! TAATCTTTATCTAATAAATT+TGG + chr5_2:56019040-56019059 Msa0777180:intron 10.0%
!!! TATTTTTTGAACAAAATTAA+AGG + chr5_2:56021322-56021341 Msa0777180:intron 10.0%
!! AACAAAACATAAAAAAAAAA+TGG + chr5_2:56025563-56025582 Msa0777180:intron 10.0%
!!! AATTAATTTTTTTTAAATGG+TGG - chr5_2:56026670-56026689 None:intergenic 10.0%
!!! TCACATATTTTATTTTATTT+TGG + chr5_2:56026810-56026829 Msa0777180:intron 10.0%
!!! CACATATTTTATTTTATTTT+GGG + chr5_2:56026811-56026830 Msa0777180:intron 10.0%
!! TTATTAGAAAAAAAATATTG+AGG + chr5_2:56026979-56026998 Msa0777180:intron 10.0%
!! TATTAGAAAAAAAATATTGA+GGG + chr5_2:56026980-56026999 Msa0777180:intron 10.0%
!! CATTATATATAGAGATAATA+TGG - chr5_2:56017786-56017805 None:intergenic 15.0%
!!! TGATCTATAATTTGTAAAAT+GGG + chr5_2:56019928-56019947 Msa0777180:intron 15.0%
!!! TTTTATTGAAGAGATTTTAA+TGG + chr5_2:56020176-56020195 Msa0777180:intron 15.0%
!!! TTTTTGGTAATAAAAAGTTT+AGG - chr5_2:56020464-56020483 None:intergenic 15.0%
!!! GTGGTTTTTTTTTTTTTTTT+TGG - chr5_2:56020480-56020499 None:intergenic 15.0%
!! ATTAATTCATAAATATGTGT+TGG - chr5_2:56020570-56020589 None:intergenic 15.0%
!!! GTATAAAATTTACTTTTCAA+GGG - chr5_2:56020704-56020723 None:intergenic 15.0%
!!! AGTATAAAATTTACTTTTCA+AGG - chr5_2:56020705-56020724 None:intergenic 15.0%
!! AGTGCATATTTAATTATTAA+GGG - chr5_2:56020764-56020783 None:intergenic 15.0%
!! TAGTGCATATTTAATTATTA+AGG - chr5_2:56020765-56020784 None:intergenic 15.0%
!! GGTTATTTAATTGTATTTAA+CGG + chr5_2:56021019-56021038 Msa0777180:intron 15.0%
!!! TAAATATCAGAAGTAAATTT+TGG - chr5_2:56021194-56021213 None:intergenic 15.0%
!!! CAATTATAATATTTTTTTGC+AGG - chr5_2:56021663-56021682 Msa0777190:intron 15.0%
!!! CAATTATGAAAAATTGATTT+TGG - chr5_2:56021779-56021798 Msa0777190:intron 15.0%
!!! TTTGATGATATTTTACAAAA+TGG - chr5_2:56021903-56021922 Msa0777190:intron 15.0%
!!! AGAATAAATGAAAGTTTTAA+GGG - chr5_2:56022023-56022042 Msa0777190:intron 15.0%
!! AAATGATTGTATGTTATATT+GGG - chr5_2:56022895-56022914 Msa0777190:intron 15.0%
!! AATATAACATACAATCATTT+GGG + chr5_2:56022895-56022914 Msa0777180:intron 15.0%
!! ATTATATAGACAATGTATAA+AGG + chr5_2:56023681-56023700 Msa0777180:intron 15.0%
!! TATAAAGTATAAACATACTT+TGG + chr5_2:56024544-56024563 Msa0777180:intron 15.0%
!! TTTATAGGCAAAAAAAATTA+AGG + chr5_2:56025373-56025392 Msa0777180:intron 15.0%
!!! TGAGTTCTATTTTTTTTTTT+GGG - chr5_2:56025505-56025524 None:intergenic 15.0%
!!! TTGAGTTCTATTTTTTTTTT+TGG - chr5_2:56025506-56025525 None:intergenic 15.0%
!!! TAAAAAACATGTTATTTGAA+AGG + chr5_2:56025687-56025706 Msa0777180:intron 15.0%
!!! TTTTTTTGTTTTTCTTTTAC+TGG - chr5_2:56025853-56025872 None:intergenic 15.0%
!!! CTGTTTCATATTTTATAATA+GGG + chr5_2:56026834-56026853 Msa0777180:intron 15.0%
!! TATTAGAAGAAAAGAAATTA+GGG - chr5_2:56027476-56027495 None:intergenic 15.0%
!! TTATTAGAAGAAAAGAAATT+AGG - chr5_2:56027477-56027496 None:intergenic 15.0%
!!! AATAATTTCATGTATTTTCT+TGG - chr5_2:56027965-56027984 None:intergenic 15.0%
!! AAGAAAATACATGAAATTAT+TGG + chr5_2:56027964-56027983 Msa0777180:intron 15.0%
!! TGTTGAAAATGAAATTTAAA+CGG - chr5_2:56028035-56028054 None:intergenic 15.0%
!!! TTCATGTTTTTTCTTATAGA+TGG + chr5_2:56017915-56017934 Msa0777180:CDS 20.0%
!! GTGGATATATAATATAGAAA+TGG - chr5_2:56018308-56018327 None:intergenic 20.0%
!!! ATTTCTTCCTCAATAAATTT+TGG + chr5_2:56018429-56018448 Msa0777180:intron 20.0%
!!! TGAAAGTTTTTTAGTAGTAA+TGG + chr5_2:56019092-56019111 Msa0777180:intron 20.0%
!!! ACAACAATACTTTTTTTTAG+AGG + chr5_2:56019118-56019137 Msa0777180:intron 20.0%
!!! CAACAATACTTTTTTTTAGA+GGG + chr5_2:56019119-56019138 Msa0777180:intron 20.0%
!!! AACAATACTTTTTTTTAGAG+GGG + chr5_2:56019120-56019139 Msa0777180:intron 20.0%
!!! AAAAGATTAATTTGTACGTA+CGG - chr5_2:56019153-56019172 None:intergenic 20.0%
!! TGAATCATATGATTTAAATG+TGG + chr5_2:56019458-56019477 Msa0777180:intron 20.0%
!!! ACTATGTTTATGAAGTTTTA+GGG - chr5_2:56019549-56019568 None:intergenic 20.0%
!!! TACTATGTTTATGAAGTTTT+AGG - chr5_2:56019550-56019569 None:intergenic 20.0%
!!! TCATAAACATAGTATGATTT+TGG + chr5_2:56019556-56019575 Msa0777180:intron 20.0%
!!! CTGATCTATAATTTGTAAAA+TGG + chr5_2:56019927-56019946 Msa0777180:intron 20.0%
!! AATATAATGTTTACAAGTCT+TGG + chr5_2:56020009-56020028 Msa0777180:intron 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - chr5_2:56020675-56020694 None:intergenic 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - chr5_2:56020676-56020695 None:intergenic 20.0%
!! GTAATTTAAGCATCATATAA+GGG - chr5_2:56020733-56020752 None:intergenic 20.0%
!! TGTAATTTAAGCATCATATA+AGG - chr5_2:56020734-56020753 None:intergenic 20.0%
!! ATATTTAATTATTAAGGGAG+GGG - chr5_2:56020759-56020778 None:intergenic 20.0%
!! CATATTTAATTATTAAGGGA+GGG - chr5_2:56020760-56020779 None:intergenic 20.0%
!! TGTCACAATAATGTAAATAA+TGG - chr5_2:56021057-56021076 None:intergenic 20.0%
!!! TAATAACTTTTACTTTGCTT+AGG - chr5_2:56021726-56021745 Msa0777190:intron 20.0%
!! TCATATTACATAACAACATT+TGG + chr5_2:56021990-56022009 Msa0777180:intron 20.0%
!!! GAGAATAAATGAAAGTTTTA+AGG - chr5_2:56022024-56022043 Msa0777190:intron 20.0%
!!! TCTTCACTTATTTTATAACT+TGG + chr5_2:56022139-56022158 Msa0777180:intron 20.0%
!!! CTTCACTTATTTTATAACTT+GGG + chr5_2:56022140-56022159 Msa0777180:intron 20.0%
!! AATGATTGTATGTTATATTG+GGG - chr5_2:56022894-56022913 Msa0777190:intron 20.0%
!! CAAATGATTGTATGTTATAT+TGG - chr5_2:56022896-56022915 Msa0777190:intron 20.0%
!! CAATATAACATACAATCATT+TGG + chr5_2:56022894-56022913 Msa0777180:intron 20.0%
!! CAAATGAAGAATTATATGAA+GGG - chr5_2:56023121-56023140 Msa0777190:CDS 20.0%
!! AAAATTACAAAATTTGGACT+TGG - chr5_2:56023370-56023389 None:intergenic 20.0%
!!! GTCCAAATTTTGTAATTTTT+CGG + chr5_2:56023371-56023390 Msa0777180:intron 20.0%
!! TTCCGAAAAATTACAAAATT+TGG - chr5_2:56023376-56023395 None:intergenic 20.0%
!!! ATTTTGTAATTTTTCGGAAA+AGG + chr5_2:56023377-56023396 Msa0777180:intron 20.0%
!! CATCAGTGATTATTAAAATT+TGG - chr5_2:56023644-56023663 None:intergenic 20.0%
!!! ATTATTTTTTTTGGCTTTTC+TGG - chr5_2:56023933-56023952 None:intergenic 20.0%
!! TAAAATCAAGTCAATTATGT+GGG - chr5_2:56024225-56024244 None:intergenic 20.0%
!! TTAAAATCAAGTCAATTATG+TGG - chr5_2:56024226-56024245 None:intergenic 20.0%
!! TTGATAAGGGATAAAATAAA+GGG - chr5_2:56024724-56024743 None:intergenic 20.0%
!!! ATTACTTCATTTTAGTTTGT+TGG - chr5_2:56025085-56025104 None:intergenic 20.0%
!! TGTTGAAAGAATTTCAATTA+AGG + chr5_2:56025227-56025246 Msa0777180:intron 20.0%
!!! TCTAGAAAAGTCAAAATTTT+CGG - chr5_2:56025327-56025346 None:intergenic 20.0%
!!! TAGCTTGGTTATTTTAATTT+TGG - chr5_2:56025529-56025548 None:intergenic 20.0%
!!! TAGAGATTTTGATTATTTGA+GGG - chr5_2:56025758-56025777 None:intergenic 20.0%
!!! AAGGTTCAATTTTGATTATA+AGG - chr5_2:56025921-56025940 None:intergenic 20.0%
!!! GTATTATTCTTGATTTTAGT+TGG - chr5_2:56025968-56025987 None:intergenic 20.0%
!! TAATGAATTGAAAAAGATTG+AGG + chr5_2:56026139-56026158 Msa0777180:intron 20.0%
!! AAAAAATTGGGAAAAAAAAG+AGG + chr5_2:56026394-56026413 Msa0777180:intron 20.0%
!! AAAAATTGGGAAAAAAAAGA+GGG + chr5_2:56026395-56026414 Msa0777180:intron 20.0%
!!! AAAGTTAAAATGGTTGATTT+CGG + chr5_2:56026449-56026468 Msa0777180:intron 20.0%
!!! CAACAAAATTTTGTTAATAC+TGG + chr5_2:56026508-56026527 Msa0777180:intron 20.0%
!! TTACTAAATACAATAAAGCA+TGG - chr5_2:56026786-56026805 None:intergenic 20.0%
!!! GCTGTTTCATATTTTATAAT+AGG + chr5_2:56026833-56026852 Msa0777180:intron 20.0%
!! TTTCGAAAAAAATAGTATTG+CGG - chr5_2:56026931-56026950 None:intergenic 20.0%
!!! TCTAATATGTTTTGAAAAAG+AGG + chr5_2:56027081-56027100 Msa0777180:intron 20.0%
!!! CTAATATGTTTTGAAAAAGA+GGG + chr5_2:56027082-56027101 Msa0777180:intron 20.0%
!!! TAATATGTTTTGAAAAAGAG+GGG + chr5_2:56027083-56027102 Msa0777180:intron 20.0%
!! AGTGTATATTTAAACATAAG+AGG + chr5_2:56027111-56027130 Msa0777180:intron 20.0%
!! GTGTATATTTAAACATAAGA+GGG + chr5_2:56027112-56027131 Msa0777180:intron 20.0%
!! TGTATATTTAAACATAAGAG+GGG + chr5_2:56027113-56027132 Msa0777180:intron 20.0%
!!! TTTTTTTTGAAGAAAGAAGT+TGG + chr5_2:56027297-56027316 Msa0777180:intron 20.0%
!!! TTACTATTTCATTTTAACTG+TGG - chr5_2:56028010-56028029 None:intergenic 20.0%
!! ACATTTAGAAATTATTGAAG+TGG + chr5_2:56028136-56028155 Msa0777180:intron 20.0%
!!! ATTTTCTCTTTAATATCGAA+GGG - chr5_2:56028204-56028223 None:intergenic 20.0%
!! TATAAGTTATCAAAATGGTT+TGG - chr5_2:56028554-56028573 None:intergenic 20.0%
!! TGTAGTATAAGTTATCAAAA+TGG - chr5_2:56028559-56028578 None:intergenic 20.0%
! TTTACAGCCTTAAAAACATT+GGG - chr5_2:56017984-56018003 None:intergenic 25.0%
! ATTTACAGCCTTAAAAACAT+TGG - chr5_2:56017985-56018004 None:intergenic 25.0%
! TTAGTATTTGATCATTGCAA+TGG - chr5_2:56018154-56018173 None:intergenic 25.0%
! CATCATCATTAAATTTGTGA+CGG - chr5_2:56018228-56018247 None:intergenic 25.0%
! GAAATCTTCATATGAACTAT+TGG - chr5_2:56018536-56018555 None:intergenic 25.0%
! TCTTATTGAGTGAATTGAAT+AGG + chr5_2:56018645-56018664 Msa0777180:intron 25.0%
! CTTATTGAGTGAATTGAATA+GGG + chr5_2:56018646-56018665 Msa0777180:intron 25.0%
! TTAAACATCAAGCTTCAAAA+AGG - chr5_2:56019244-56019263 None:intergenic 25.0%
!!! ACTTTTTGCTTATTGATAAC+AGG + chr5_2:56019600-56019619 Msa0777180:intron 25.0%
!!! CTTTTTGCTTATTGATAACA+GGG + chr5_2:56019601-56019620 Msa0777180:intron 25.0%
!! AGTTTTTGCTGATAATTTTC+TGG - chr5_2:56020037-56020056 None:intergenic 25.0%
!! AATATGTGCATATAACTTGT+TGG - chr5_2:56020149-56020168 None:intergenic 25.0%
!! ATAAAAAGTTTAGGTGGATT+CGG - chr5_2:56020455-56020474 None:intergenic 25.0%
!! TTGGTAATAAAAAGTTTAGG+TGG - chr5_2:56020461-56020480 None:intergenic 25.0%
! GTTAGAACAAAACGAAAATT+AGG - chr5_2:56020520-56020539 None:intergenic 25.0%
!!! GGTGTATATTTTAACATAAG+AGG - chr5_2:56020677-56020696 None:intergenic 25.0%
!!! AAAATTTACTTTTCAAGGGA+GGG - chr5_2:56020700-56020719 None:intergenic 25.0%
!!! TAAAATTTACTTTTCAAGGG+AGG - chr5_2:56020701-56020720 None:intergenic 25.0%
! GCATATTTAATTATTAAGGG+AGG - chr5_2:56020761-56020780 None:intergenic 25.0%
! ACTTTAAACCAAGTACAAAA+CGG - chr5_2:56020996-56021015 None:intergenic 25.0%
! TAGTTATAATTCAACTCAAG+TGG + chr5_2:56021375-56021394 Msa0777180:intron 25.0%
!!! AATGGGTTTATTTTGAGTAT+GGG - chr5_2:56021416-56021435 None:intergenic 25.0%
!!! GACTTGTTTATTTTGAGAAT+GGG - chr5_2:56021433-56021452 None:intergenic 25.0%
!!! AGACTTGTTTATTTTGAGAA+TGG - chr5_2:56021434-56021453 None:intergenic 25.0%
!!! ATTTTGAGAATAGCTAAAGA+TGG - chr5_2:56021503-56021522 None:intergenic 25.0%
! AAATGGATCTTAATGCTATT+GGG - chr5_2:56021886-56021905 Msa0777190:intron 25.0%
! AAAATGGATCTTAATGCTAT+TGG - chr5_2:56021887-56021906 Msa0777190:intron 25.0%
!!! AATGAAAGTTTTAAGGGTTA+CGG - chr5_2:56022017-56022036 Msa0777190:intron 25.0%
! TCTCTATATATTTAGCAATG+AGG + chr5_2:56022193-56022212 Msa0777180:intron 25.0%
! TATATATTTAGCAATGAGGA+AGG + chr5_2:56022197-56022216 Msa0777180:intron 25.0%
! AAGAAAATCATCAACAAACT+TGG - chr5_2:56022948-56022967 Msa0777190:CDS 25.0%
! GCAAATGAAGAATTATATGA+AGG - chr5_2:56023122-56023141 Msa0777190:CDS 25.0%
!! ATTATCCCATTTTCATATTC+AGG + chr5_2:56023527-56023546 Msa0777180:intron 25.0%
! TCATGTCAATTGATAAATCA+TGG - chr5_2:56023574-56023593 None:intergenic 25.0%
! TGAAGTATATTTGAATCACA+AGG + chr5_2:56023850-56023869 Msa0777180:intron 25.0%
! GGAAACTAAAATCAATGATT+TGG + chr5_2:56023871-56023890 Msa0777180:intron 25.0%
! TGGTCTATGTTAGATATAAT+AGG + chr5_2:56024027-56024046 Msa0777180:intron 25.0%
! CAAATCTAGTCAATATATAG+TGG - chr5_2:56024191-56024210 None:intergenic 25.0%
!! CACTATATATTGACTAGATT+TGG + chr5_2:56024189-56024208 Msa0777180:intron 25.0%
! TACTTTGGCTACAATTAATT+TGG + chr5_2:56024559-56024578 Msa0777180:intron 25.0%
!! GTTGATAAGGGATAAAATAA+AGG - chr5_2:56024725-56024744 None:intergenic 25.0%
!!! TGTGATTTTTTTGGTGTTTT+AGG - chr5_2:56024801-56024820 None:intergenic 25.0%
! TTGATAAGGGATAGAATAAA+GGG - chr5_2:56024998-56025017 None:intergenic 25.0%
! TTGTTCTTATCTTAGTAGTT+AGG - chr5_2:56025023-56025042 None:intergenic 25.0%
! CATTTGATTATACAGTAGAA+AGG + chr5_2:56025054-56025073 Msa0777180:intron 25.0%
! AAGTAATAAGTATAGTTGAG+CGG + chr5_2:56025098-56025117 Msa0777180:intron 25.0%
! AGTAGATCAAAGAAAACTTT+AGG + chr5_2:56025263-56025282 Msa0777180:intron 25.0%
! TCAATTCAGAAGATCTTTAT+AGG + chr5_2:56025358-56025377 Msa0777180:intron 25.0%
! ACACAAATTGAAACCATTTA+AGG + chr5_2:56025421-56025440 Msa0777180:intron 25.0%
! AAAAAATCACCTTAGTTCAT+TGG + chr5_2:56025457-56025476 Msa0777180:intron 25.0%
!!! ATCATAAACGTGTTATTTGA+TGG + chr5_2:56025617-56025636 Msa0777180:intron 25.0%
!!! AGAGATTTTGATTATTTGAG+GGG - chr5_2:56025757-56025776 None:intergenic 25.0%
!!! CTAGAGATTTTGATTATTTG+AGG - chr5_2:56025759-56025778 None:intergenic 25.0%
!!! TTGATTTTAGTTGGTTAACA+AGG - chr5_2:56025959-56025978 None:intergenic 25.0%
! TCAAGAATAATACAAAGATG+AGG + chr5_2:56025975-56025994 Msa0777180:intron 25.0%
! CAAGAATAATACAAAGATGA+GGG + chr5_2:56025976-56025995 Msa0777180:intron 25.0%
! TAGTTATAGTTTAGAAGAGA+TGG + chr5_2:56026213-56026232 Msa0777180:intron 25.0%
! ATAGTTTATGTCAACAGAAA+AGG + chr5_2:56026343-56026362 Msa0777180:intron 25.0%
!!! GAGGGATTTTCTAAAAAATT+GGG + chr5_2:56026382-56026401 Msa0777180:intron 25.0%
!! CAAAATTTTGTTAATACTGG+CGG + chr5_2:56026511-56026530 Msa0777180:intron 25.0%
! TTCGAAAAAAATAGTATTGC+GGG - chr5_2:56026930-56026949 None:intergenic 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG + chr5_2:56027008-56027027 Msa0777180:intron 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG + chr5_2:56027009-56027028 Msa0777180:intron 25.0%
! ATGTAATTCAATCTTCTCTT+AGG + chr5_2:56027039-56027058 Msa0777180:intron 25.0%
! TGTAATTCAATCTTCTCTTA+GGG + chr5_2:56027040-56027059 Msa0777180:intron 25.0%
! CTTGATATATATCACACATT+TGG + chr5_2:56027820-56027839 Msa0777180:intron 25.0%
! CTTAGAACAAAACGAAAATT+AGG - chr5_2:56027893-56027912 None:intergenic 25.0%
!! ATTTCATGTATTTTCTTGGT+TGG - chr5_2:56027961-56027980 None:intergenic 25.0%
!! CATTTTCTCTTTAATATCGA+AGG - chr5_2:56028205-56028224 None:intergenic 25.0%
! CTTCGATATTAAAGAGAAAA+TGG + chr5_2:56028203-56028222 Msa0777180:intron 25.0%
!! TGGTTTGATAATCTAAAGTT+CGG + chr5_2:56028233-56028252 Msa0777180:intron 25.0%
!! CTGAAGTGATTAATGAATTT+TGG - chr5_2:56028340-56028359 None:intergenic 25.0%
! TTTAATTCTTTGTGCTTCTT+AGG + chr5_2:56028368-56028387 Msa0777180:intron 25.0%
! GTAAATACGATCTCTATAAA+CGG - chr5_2:56028423-56028442 None:intergenic 25.0%
! AAGAATCTCATCAACAAAAA+GGG + chr5_2:56028578-56028597 Msa0777180:CDS 25.0%
!! AAGTAGTATAAGGCTTTAGA+AGG - chr5_2:56017838-56017857 None:intergenic 30.0%
! CCATTTTGCTAAGTAGTATA+AGG - chr5_2:56017848-56017867 None:intergenic 30.0%
CCTTATACTACTTAGCAAAA+TGG + chr5_2:56017845-56017864 Msa0777180:exon 30.0%
!!! TTTCTCACTAGTTTTCTAAG+TGG - chr5_2:56018330-56018349 None:intergenic 30.0%
ATTAGCGCCAAAATTTATTG+AGG - chr5_2:56018439-56018458 None:intergenic 30.0%
!! TCTTTCAAAGAGTCTTATTG+AGG + chr5_2:56018736-56018755 Msa0777180:intron 30.0%
!! CTTTCAAAGAGTCTTATTGA+GGG + chr5_2:56018737-56018756 Msa0777180:intron 30.0%
TATATTCACCAACCTATGTT+GGG - chr5_2:56018878-56018897 None:intergenic 30.0%
ATATATTCACCAACCTATGT+TGG - chr5_2:56018879-56018898 None:intergenic 30.0%
ACAACATGGGAAAATTACAA+GGG - chr5_2:56018991-56019010 None:intergenic 30.0%
GAGTATTTAACTCACAACAT+GGG - chr5_2:56019004-56019023 None:intergenic 30.0%
TGCATTGTGAATAAAGCAAA+AGG + chr5_2:56019203-56019222 Msa0777180:intron 30.0%
!!! AAGCTTCAAAAAGGCATTTT+TGG - chr5_2:56019235-56019254 None:intergenic 30.0%
AAAATCAGACATGCTAAATG+TGG - chr5_2:56019404-56019423 None:intergenic 30.0%
!! AGCATGTCTGATTTTTGTTT+TGG + chr5_2:56019409-56019428 Msa0777180:intron 30.0%
TGTAATTCAAGCATCTTTGA+GGG - chr5_2:56027143-56027162 None:intergenic 30.0%
!! AAATTTACTTTTCAAGGGAG+GGG - chr5_2:56020699-56020718 None:intergenic 30.0%
TTTAAGCATCATATAAGGGA+GGG - chr5_2:56020729-56020748 None:intergenic 30.0%
ATTTAAGCATCATATAAGGG+AGG - chr5_2:56020730-56020749 None:intergenic 30.0%
! GTTTTGTACTTGGTTTAAAG+TGG + chr5_2:56020995-56021014 Msa0777180:intron 30.0%
ATTATTGTGACAAAGCCAAT+AGG + chr5_2:56021065-56021084 Msa0777180:intron 30.0%
! GGCATTTTATATGTCAATTG+TGG - chr5_2:56021229-56021248 None:intergenic 30.0%
!! TTTCAATTTTCTGAGCATTG+TGG - chr5_2:56021250-56021269 None:intergenic 30.0%
!!! GAATGGGTTTATTTTGAGTA+TGG - chr5_2:56021417-56021436 None:intergenic 30.0%
GGTTTGTGTAACTTTATGTT+TGG - chr5_2:56021473-56021492 None:intergenic 30.0%
GATGATCTAGATATGTCATT+AGG + chr5_2:56021608-56021627 Msa0777180:intron 30.0%
! ATCAGTAAAACGCAATTTTG+TGG - chr5_2:56022076-56022095 Msa0777190:intron 30.0%
! GATTAGTCATTATCAACTCT+TGG + chr5_2:56022113-56022132 Msa0777180:intron 30.0%
! ATTTTATAACTTGGGCCTTT+TGG + chr5_2:56022148-56022167 Msa0777180:intron 30.0%
TTATACCTGTTGTGTATCAT+TGG + chr5_2:56022279-56022298 Msa0777180:intron 30.0%
TATACCTGTTGTGTATCATT+GGG + chr5_2:56022280-56022299 Msa0777180:intron 30.0%
TTGTGTATCATTGGGAAATA+AGG + chr5_2:56022288-56022307 Msa0777180:intron 30.0%
GTATGCTTAAAAGCAATAGT+AGG + chr5_2:56022481-56022500 Msa0777180:intron 30.0%
TTTGAACTCATAACTCCAAA+AGG + chr5_2:56022567-56022586 Msa0777180:intron 30.0%
TTGAACTCATAACTCCAAAA+GGG + chr5_2:56022568-56022587 Msa0777180:intron 30.0%
AAATATGCAAGACATCTAAG+TGG - chr5_2:56022842-56022861 Msa0777190:intron 30.0%
ACAAAATCCAATGGAAAACA+TGG - chr5_2:56023273-56023292 None:intergenic 30.0%
! ATGTTTTCCATTGGATTTTG+TGG + chr5_2:56023272-56023291 Msa0777180:intron 30.0%
! TTTTCAACCACAAAATCCAA+TGG - chr5_2:56023282-56023301 None:intergenic 30.0%
!!! TCGGAAAAGGTCTATTTTTT+AGG + chr5_2:56023390-56023409 Msa0777180:intron 30.0%
TCAAAATGTGGTTTCAAGAA+GGG - chr5_2:56023443-56023462 None:intergenic 30.0%
TTCAAAATGTGGTTTCAAGA+AGG - chr5_2:56023444-56023463 None:intergenic 30.0%
! TTGAAACCACATTTTGAACA+CGG + chr5_2:56023446-56023465 Msa0777180:intron 30.0%
TTAATTGTAAGTACATCAGC+AGG + chr5_2:56023473-56023492 Msa0777180:intron 30.0%
! AGACAATGTATAAAGGTACA+AGG + chr5_2:56023688-56023707 Msa0777180:intron 30.0%
TGTTATCTATCTGCAGATTA+TGG + chr5_2:56023968-56023987 Msa0777180:intron 30.0%
! GTTAGATATAATAGGTGTTG+TGG + chr5_2:56024035-56024054 Msa0777180:intron 30.0%
! TAGAGGAAGGAAAAATTTTC+TGG + chr5_2:56024502-56024521 Msa0777180:intron 30.0%
AGTTAGTTAGCTATTTGGTT+AGG - chr5_2:56024665-56024684 None:intergenic 30.0%
TGAGTAGTTAGTTAGCTATT+TGG - chr5_2:56024670-56024689 None:intergenic 30.0%
!! ACAACTTCTGTAGTTGATAA+GGG - chr5_2:56024737-56024756 None:intergenic 30.0%
! TACAACTTCTGTAGTTGATA+AGG - chr5_2:56024738-56024757 None:intergenic 30.0%
CACCAAAAAAATCACATACA+AGG + chr5_2:56024805-56024824 Msa0777180:intron 30.0%
!!! GTCCTTGTATGTGATTTTTT+TGG - chr5_2:56024810-56024829 None:intergenic 30.0%
AAATAAGAGTAGTTAAGAGG+AGG - chr5_2:56024974-56024993 None:intergenic 30.0%
GGAAAATAAGAGTAGTTAAG+AGG - chr5_2:56024977-56024996 None:intergenic 30.0%
! GTTGATAAGGGATAGAATAA+AGG - chr5_2:56024999-56025018 None:intergenic 30.0%
!! TAGTAGTTAGGAGTTGATAA+GGG - chr5_2:56025011-56025030 None:intergenic 30.0%
!! TTAGTAGTTAGGAGTTGATA+AGG - chr5_2:56025012-56025031 None:intergenic 30.0%
!!! ACTTCATTTTAGTTTGTTGG+TGG - chr5_2:56025082-56025101 None:intergenic 30.0%
AAAACAAACACCAATTGTTG+AGG + chr5_2:56025181-56025200 Msa0777180:intron 30.0%
AATTGTTGAGGAGAAAAGTA+GGG + chr5_2:56025193-56025212 Msa0777180:intron 30.0%
AAGAATTTCAATTAAGGCTC+CGG + chr5_2:56025233-56025252 Msa0777180:intron 30.0%
!! CTTTGATCTACTTTTCTTAC+CGG - chr5_2:56025255-56025274 None:intergenic 30.0%
TTAGGAGAAACGATTAAACA+AGG + chr5_2:56025281-56025300 Msa0777180:intron 30.0%
CGGTTAAATTGTTTATCCTA+TGG - chr5_2:56025307-56025326 None:intergenic 30.0%
!!! TTGACTTTTCTAGAGTCAAA+TGG + chr5_2:56025333-56025352 Msa0777180:intron 30.0%
! ACCATTTAAGGTACACAAAT+TGG + chr5_2:56025433-56025452 Msa0777180:intron 30.0%
TCCAATTTGTGTACCTTAAA+TGG - chr5_2:56025437-56025456 None:intergenic 30.0%
TTTAGATGACCAATGAACTA+AGG - chr5_2:56025469-56025488 None:intergenic 30.0%
TGAATAATTACTCTCTAGCT+TGG - chr5_2:56025544-56025563 None:intergenic 30.0%
!!! GAGATTTTGATTATTTGAGG+GGG - chr5_2:56025756-56025775 None:intergenic 30.0%
! GATCTACTGTTGATTATTTG+AGG - chr5_2:56025796-56025815 None:intergenic 30.0%
! TTTTACTGGTAGAAAAACTC+AGG - chr5_2:56025839-56025858 None:intergenic 30.0%
TGATTAAGACTTTATGCTGT+TGG - chr5_2:56025901-56025920 None:intergenic 30.0%
ATAATACAAAGATGAGGGTT+TGG + chr5_2:56025981-56026000 Msa0777180:intron 30.0%
TAATACAAAGATGAGGGTTT+GGG + chr5_2:56025982-56026001 Msa0777180:intron 30.0%
AAAGAAACATTGAGGAAGAA+AGG + chr5_2:56026188-56026207 Msa0777180:intron 30.0%
AAGAAACATTGAGGAAGAAA+GGG + chr5_2:56026189-56026208 Msa0777180:intron 30.0%
GGAAAAAGATATAAGAGAGA+AGG + chr5_2:56026274-56026293 Msa0777180:intron 30.0%
AAGATATAAGAGAGAAGGTT+TGG + chr5_2:56026279-56026298 Msa0777180:intron 30.0%
ACAGAAAAGGACAAAAGAAA+AGG + chr5_2:56026356-56026375 Msa0777180:intron 30.0%
AAAAGGACAAAAGAAAAGGA+TGG + chr5_2:56026360-56026379 Msa0777180:intron 30.0%
!! GGAGGGATTTTCTAAAAAAT+TGG + chr5_2:56026381-56026400 Msa0777180:intron 30.0%
TTTCCTAACCTCACAATATT+TGG - chr5_2:56026432-56026451 None:intergenic 30.0%
TGAGGTTAGGAAAGTTAAAA+TGG + chr5_2:56026439-56026458 Msa0777180:intron 30.0%
ACAAAAAAACGCGTTAATTG+CGG - chr5_2:56026637-56026656 None:intergenic 30.0%
!! AGATTTTAACATAAGAGGGT+AGG + chr5_2:56027013-56027032 Msa0777180:intron 30.0%
!! GATTTTAACATAAGAGGGTA+GGG + chr5_2:56027014-56027033 Msa0777180:intron 30.0%
!! ATTTTAACATAAGAGGGTAG+GGG + chr5_2:56027015-56027034 Msa0777180:intron 30.0%
GTAATTCAATCTTCTCTTAG+GGG + chr5_2:56027041-56027060 Msa0777180:intron 30.0%
ATATTTAAACATAAGAGGGG+AGG + chr5_2:56027116-56027135 Msa0777180:intron 30.0%
TGTAATTCAAGCATCTTTGA+AGG + chr5_2:56027143-56027162 Msa0777180:intron 30.0%
GTAATTCAAGCATCTTTGAA+GGG + chr5_2:56027144-56027163 Msa0777180:intron 30.0%
TTCGAAGAATCTATTTCGTT+TGG + chr5_2:56027206-56027225 Msa0777180:intron 30.0%
TGGTGAAAAAAAAGAGAAGT+TGG + chr5_2:56027267-56027286 Msa0777180:intron 30.0%
! TTCTATCATATTTTGCAGCT+TGG + chr5_2:56027544-56027563 Msa0777180:intron 30.0%
!! GAGCTTTAAACCTATTGATA+AGG - chr5_2:56027675-56027694 None:intergenic 30.0%
! ATCAATAGGTTTAAAGCTCA+AGG + chr5_2:56027676-56027695 Msa0777180:CDS 30.0%
AAAAAGACATGTACCAGATA+AGG - chr5_2:56027725-56027744 None:intergenic 30.0%
TTTAGATTATCAAACCACCA+GGG - chr5_2:56028230-56028249 None:intergenic 30.0%
ATAGTTTATTTGCCAAGTCA+AGG + chr5_2:56028459-56028478 Msa0777180:intron 30.0%
!! TTTATTGTACCACTTTTCCT+TGG - chr5_2:56028497-56028516 None:intergenic 30.0%
CAAGAATCTCATCAACAAAA+AGG + chr5_2:56028577-56028596 Msa0777180:CDS 30.0%
!! TAGTATAAGGCTTTAGAAGG+TGG - chr5_2:56017835-56017854 None:intergenic 35.0%
!! GAAGTGTCCCAATGTTTTTA+AGG + chr5_2:56017974-56017993 Msa0777180:CDS 35.0%
CAAAGCAGTCATGAAAATGA+AGG - chr5_2:56018064-56018083 None:intergenic 35.0%
!! GTTTTCTTTCTCTGTTTCTC+TGG - chr5_2:56018186-56018205 None:intergenic 35.0%
GGACGTAACTATTGCAATAA+TGG + chr5_2:56018758-56018777 Msa0777180:intron 35.0%
ATATTCACCAACCTATGTTG+GGG - chr5_2:56018877-56018896 None:intergenic 35.0%
CACAACATGGGAAAATTACA+AGG - chr5_2:56018992-56019011 None:intergenic 35.0%
CGAGTATTTAACTCACAACA+TGG - chr5_2:56019005-56019024 None:intergenic 35.0%
ACGCATGTCTAACTAATATG+CGG - chr5_2:56019329-56019348 None:intergenic 35.0%
AGGGCAATGATAGGTATATA+AGG - chr5_2:56019530-56019549 None:intergenic 35.0%
!!! TGAAGTTTTAGGGCAATGAT+AGG - chr5_2:56019539-56019558 None:intergenic 35.0%
TTCTTCTCTCCTTTATTGGA+GGG - chr5_2:56019658-56019677 None:intergenic 35.0%
ATTCTTCTCTCCTTTATTGG+AGG - chr5_2:56019659-56019678 None:intergenic 35.0%
TGCATTCTTCTCTCCTTTAT+TGG - chr5_2:56019662-56019681 None:intergenic 35.0%
CCTCTCAAAGAATCTTTGTT+GGG - chr5_2:56019688-56019707 None:intergenic 35.0%
ACCTCTCAAAGAATCTTTGT+TGG - chr5_2:56019689-56019708 None:intergenic 35.0%
CATTGATGCCATAAAGTCTA+AGG + chr5_2:56019717-56019736 Msa0777180:CDS 35.0%
GTAATTCAAGCATCTTTGAG+GGG - chr5_2:56020644-56020663 None:intergenic 35.0%
GTGTAATTCAAGCATCTTTG+AGG - chr5_2:56027142-56027161 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+AGG - chr5_2:56020670-56020689 None:intergenic 35.0%
!! AATTTACTTTTCAAGGGAGG+GGG - chr5_2:56020698-56020717 None:intergenic 35.0%
TTAAGCATCATATAAGGGAG+GGG - chr5_2:56020728-56020747 None:intergenic 35.0%
! ACAAAAAAACGCGTGTTTTC+CGG + chr5_2:56020840-56020859 Msa0777180:intron 35.0%
!!! AACATACATTTTTTAGCCGC+CGG - chr5_2:56020862-56020881 None:intergenic 35.0%
CGGCTAAAAAATGTATGTTC+CGG + chr5_2:56020863-56020882 Msa0777180:intron 35.0%
CTAAAAAATGTATGTTCCGG+CGG + chr5_2:56020866-56020885 Msa0777180:intron 35.0%
AATGCCACAATTGTACATAG+TGG - chr5_2:56020901-56020920 None:intergenic 35.0%
CATTGTGGCATGCAAAATTT+CGG - chr5_2:56020934-56020953 None:intergenic 35.0%
TTAAACCAAGTACAAAACGG+CGG - chr5_2:56020993-56021012 None:intergenic 35.0%
! TTGTACTTGGTTTAAAGTGG+CGG + chr5_2:56020998-56021017 Msa0777180:intron 35.0%
AAAATGCCAGAAACACCTAT+TGG - chr5_2:56021083-56021102 None:intergenic 35.0%
!! CAGAAGTAAATTTTGGCAGT+TGG - chr5_2:56021187-56021206 None:intergenic 35.0%
ATAGCTAAAGATGGTAGCAA+TGG - chr5_2:56021494-56021513 None:intergenic 35.0%
CTACTGCTGTCACTAAAATT+AGG + chr5_2:56021553-56021572 Msa0777180:intron 35.0%
CTAGATATGTCATTAGGTGT+TGG + chr5_2:56021614-56021633 Msa0777180:intron 35.0%
! CTTTGCTTAGGTTGTTGAAT+TGG - chr5_2:56021714-56021733 Msa0777190:intron 35.0%
TATACCACTACCACTATTAC+CGG - chr5_2:56021958-56021977 Msa0777190:intron 35.0%
! ATTTTGTGCATGTGTCTTTC+TGG - chr5_2:56022238-56022257 Msa0777190:intron 35.0%
ATTTCCCAATGATACACAAC+AGG - chr5_2:56022287-56022306 Msa0777190:CDS 35.0%
GAACCAAAAACTTGCAACTA+TGG - chr5_2:56022389-56022408 Msa0777190:CDS 35.0%
TGAGTTCAAACTACAGCATT+TGG - chr5_2:56022557-56022576 Msa0777190:intron 35.0%
AGATTGCAGAGGCTATTTAT+GGG - chr5_2:56022762-56022781 Msa0777190:intron 35.0%
AAGATTGCAGAGGCTATTTA+TGG - chr5_2:56022763-56022782 Msa0777190:intron 35.0%
ATAAATAGCCTCTGCAATCT+TGG + chr5_2:56022762-56022781 Msa0777180:intron 35.0%
GGGTGAAGAAAATCAAGAAT+TGG - chr5_2:56022874-56022893 Msa0777190:intron 35.0%
ATCATCAACAAACTTGGTCT+TGG - chr5_2:56022942-56022961 Msa0777190:CDS 35.0%
TTAGCCTCGTAGAATGAATT+AGG + chr5_2:56022966-56022985 Msa0777180:intron 35.0%
GATTCCTAATTCATTCTACG+AGG - chr5_2:56022973-56022992 Msa0777190:CDS 35.0%
CAATTCCAGAATCATAGTCA+TGG + chr5_2:56023019-56023038 Msa0777180:intron 35.0%
CGAGATTTATGCGTTGTTAA+AGG - chr5_2:56023147-56023166 Msa0777190:CDS 35.0%
! GTCAATGATGCATTTGGAAT+TGG - chr5_2:56023251-56023270 Msa0777190:CDS 35.0%
AACATGGTCAATGATGCATT+TGG - chr5_2:56023257-56023276 Msa0777190:CDS 35.0%
! TCATTGACCATGTTTTCCAT+TGG + chr5_2:56023263-56023282 Msa0777180:intron 35.0%
!! AAAAGTATCTTCTGCAACAC+AGG + chr5_2:56023298-56023317 Msa0777180:intron 35.0%
TACAAAATTTGGACTTGGCA+TGG - chr5_2:56023365-56023384 None:intergenic 35.0%
AAAATGTGGTTTCAAGAAGG+GGG - chr5_2:56023441-56023460 None:intergenic 35.0%
CAAAATGTGGTTTCAAGAAG+GGG - chr5_2:56023442-56023461 None:intergenic 35.0%
GCACACCTGAATATGAAAAT+GGG - chr5_2:56023535-56023554 None:intergenic 35.0%
AGCACACCTGAATATGAAAA+TGG - chr5_2:56023536-56023555 None:intergenic 35.0%
!!! CACAGTTTTGAGATTTCAGA+CGG + chr5_2:56023731-56023750 Msa0777180:intron 35.0%
TGACAGTTAAAGCAGTTCTA+TGG + chr5_2:56023783-56023802 Msa0777180:intron 35.0%
GACAGTTAAAGCAGTTCTAT+GGG + chr5_2:56023784-56023803 Msa0777180:intron 35.0%
AATCTGCAGATAGATAACAG+TGG - chr5_2:56023967-56023986 None:intergenic 35.0%
!!! CATGTTTTATGGTGGATTGT+TGG - chr5_2:56024001-56024020 None:intergenic 35.0%
CAACAATCCACCATAAAACA+TGG + chr5_2:56023999-56024018 Msa0777180:intron 35.0%
AAGTCAATTATGTGGGAGTT+CGG - chr5_2:56024218-56024237 None:intergenic 35.0%
! AGGAAGGAAAAATTTTCTGG+AGG + chr5_2:56024505-56024524 Msa0777180:intron 35.0%
!! AAGGAAAAATTTTCTGGAGG+AGG + chr5_2:56024508-56024527 Msa0777180:intron 35.0%
TTAGGTAGAGAATACAAGGA+TGG - chr5_2:56024647-56024666 None:intergenic 35.0%
TTGGTTAGGTAGAGAATACA+AGG - chr5_2:56024651-56024670 None:intergenic 35.0%
GCTCATAGTCATTGATAAGT+GGG - chr5_2:56025126-56025145 None:intergenic 35.0%
!! CTACTTTTCTCCTCAACAAT+TGG - chr5_2:56025194-56025213 None:intergenic 35.0%
CAATTGTTGAGGAGAAAAGT+AGG + chr5_2:56025192-56025211 Msa0777180:intron 35.0%
AAACGATTAAACAAGGCCAT+AGG + chr5_2:56025288-56025307 Msa0777180:intron 35.0%
! CTACTGTTGATTATTTGAGG+AGG - chr5_2:56025793-56025812 None:intergenic 35.0%
!! ATTTCTGAAACCCTCATCTT+TGG - chr5_2:56026065-56026084 None:intergenic 35.0%
AAGATGAGGGTTTCAGAAAT+CGG + chr5_2:56026065-56026084 Msa0777180:intron 35.0%
TTCAGAAATCGGTTGAAGAT+TGG + chr5_2:56026076-56026095 Msa0777180:intron 35.0%
TCAGAAATCGGTTGAAGATT+GGG + chr5_2:56026077-56026096 Msa0777180:intron 35.0%
TTGAGGAATCAGTGAAGAAA+AGG + chr5_2:56026156-56026175 Msa0777180:intron 35.0%
!!! TATGTTTTGAAAAAGAGGGG+AGG + chr5_2:56027086-56027105 Msa0777180:intron 35.0%
!!! ATGTTTTGAAAAAGAGGGGA+GGG + chr5_2:56027087-56027106 Msa0777180:intron 35.0%
GAATCTATTTCGTTTGGCAA+TGG + chr5_2:56027212-56027231 Msa0777180:intron 35.0%
CGTTATGTTTAGCAAAATCG+CGG - chr5_2:56027356-56027375 None:intergenic 35.0%
! TATCATATTTTGCAGCTTGG+AGG + chr5_2:56027547-56027566 Msa0777180:intron 35.0%
! ATCATATTTTGCAGCTTGGA+GGG + chr5_2:56027548-56027567 Msa0777180:intron 35.0%
CCAAGTTTAACCTTCCAAAA+AGG - chr5_2:56027574-56027593 None:intergenic 35.0%
!! CCTTTTTGGAAGGTTAAACT+TGG + chr5_2:56027571-56027590 Msa0777180:CDS 35.0%
GAAGGTTAAACTTGGAAGAA+GGG + chr5_2:56027579-56027598 Msa0777180:CDS 35.0%
CCTATTGATAAGGTTGCTAA+GGG - chr5_2:56027665-56027684 None:intergenic 35.0%
ACCTATTGATAAGGTTGCTA+AGG - chr5_2:56027666-56027685 None:intergenic 35.0%
TATCACACATTTGGTTGACT+AGG + chr5_2:56027829-56027848 Msa0777180:intron 35.0%
ATTAAAGAGAAAATGGACCC+TGG + chr5_2:56028210-56028229 Msa0777180:intron 35.0%
CTTTAGATTATCAAACCACC+AGG - chr5_2:56028231-56028250 None:intergenic 35.0%
AAAGCTCTTGATCAGAATGA+AGG - chr5_2:56028607-56028626 None:intergenic 35.0%
! TCTGATCAAGAGCTTTTCAA+TGG + chr5_2:56028611-56028630 Msa0777180:CDS 35.0%
TGCTACTGCAATGATTAAGA+TGG + chr5_2:56028697-56028716 Msa0777180:CDS 35.0%
GCTACTGCAATGATTAAGAT+GGG + chr5_2:56028698-56028717 Msa0777180:CDS 35.0%
!! ATAAGGCTTTAGAAGGTGGA+TGG - chr5_2:56017831-56017850 None:intergenic 40.0%
!!! CTCACTAGTTTTCTAAGTGG+TGG - chr5_2:56018327-56018346 None:intergenic 40.0%
ATCCAGCACTAAATAGTGTG+AGG + chr5_2:56018385-56018404 Msa0777180:intron 40.0%
ATCCTCACACTATTTAGTGC+TGG - chr5_2:56018390-56018409 None:intergenic 40.0%
! TTTTCATGTCGTTACGCTAC+TGG + chr5_2:56018679-56018698 Msa0777180:intron 40.0%
AAATCGCTCTCAAAGATGAG+TGG - chr5_2:56018847-56018866 None:intergenic 40.0%
ATTTACCATGTCCCCAACAT+AGG + chr5_2:56018863-56018882 Msa0777180:intron 40.0%
! TATTGATAACAGGGCTGTGA+TGG + chr5_2:56019610-56019629 Msa0777180:intron 40.0%
CCCAACAAAGATTCTTTGAG+AGG + chr5_2:56019685-56019704 Msa0777180:CDS 40.0%
TGATGCCATAAAGTCTAAGG+TGG + chr5_2:56019720-56019739 Msa0777180:CDS 40.0%
TGACTCCACCTTAGACTTTA+TGG - chr5_2:56019728-56019747 None:intergenic 40.0%
ATGTAGAGAGACTGTAGACT+AGG + chr5_2:56020086-56020105 Msa0777180:intron 40.0%
TACCTTTGTAAGTGCCCTTT+GGG + chr5_2:56020393-56020412 Msa0777180:intron 40.0%
GGCATAACATGCAATGTATG+TGG - chr5_2:56020499-56020518 None:intergenic 40.0%
GCATGCCACAATGTTTAAAG+CGG + chr5_2:56020941-56020960 Msa0777180:intron 40.0%
!! AACTGCCGCTTTAAACATTG+TGG - chr5_2:56020949-56020968 None:intergenic 40.0%
ACAAAGCCAATAGGTGTTTC+TGG + chr5_2:56021074-56021093 Msa0777180:intron 40.0%
GTACTTTCTGCATATTACGG+CGG - chr5_2:56021109-56021128 None:intergenic 40.0%
CCGGTACTTTCTGCATATTA+CGG - chr5_2:56021112-56021131 None:intergenic 40.0%
! CCGTAATATGCAGAAAGTAC+CGG + chr5_2:56021109-56021128 Msa0777180:intron 40.0%
!! TAATATGCAGAAAGTACCGG+CGG + chr5_2:56021112-56021131 Msa0777180:intron 40.0%
! TTTTTGCAGGCATCAAACGT+AGG - chr5_2:56021650-56021669 Msa0777190:intron 40.0%
CTAGTTGCGTAGAATCCAAA+AGG - chr5_2:56022166-56022185 Msa0777190:intron 40.0%
TTAGCAATGAGGAAGGTTGT+AGG + chr5_2:56022204-56022223 Msa0777180:intron 40.0%
TACATTAAAGCGAAGGAAGG+TGG - chr5_2:56022340-56022359 Msa0777190:CDS 40.0%
! TGTTGGCTACATTAAAGCGA+AGG - chr5_2:56022347-56022366 Msa0777190:CDS 40.0%
CCAAAAACTTGCAACTATGG+AGG - chr5_2:56022386-56022405 Msa0777190:CDS 40.0%
! CCTCCATAGTTGCAAGTTTT+TGG + chr5_2:56022383-56022402 Msa0777180:intron 40.0%
TTTCGAGGTAGTACTTCAAG+CGG - chr5_2:56022427-56022446 Msa0777190:intron 40.0%
TTGTATGGGATAAGAACCAC+CGG + chr5_2:56022531-56022550 Msa0777180:intron 40.0%
TTCAAACTACAGCATTTGGC+CGG - chr5_2:56022553-56022572 Msa0777190:intron 40.0%
TCCAAAAGGGTTAAAGCCAT+CGG + chr5_2:56022581-56022600 Msa0777180:intron 40.0%
CATTGGATGGTAACCAAGAT+GGG - chr5_2:56022707-56022726 Msa0777190:intron 40.0%
AAGTAGCGCAATATCTTTGC+AGG + chr5_2:56022795-56022814 Msa0777180:intron 40.0%
ATGCAAGACATCTAAGTGGA+AGG - chr5_2:56022838-56022857 Msa0777190:intron 40.0%
ATACAATCATTTGGGCAAGC+AGG + chr5_2:56022903-56022922 Msa0777180:intron 40.0%
CAAAGCCATGACTATGATTC+TGG - chr5_2:56023027-56023046 Msa0777190:CDS 40.0%
CCTCTGTGCATAACAATGAA+GGG - chr5_2:56023199-56023218 Msa0777190:CDS 40.0%
TCCTCTGTGCATAACAATGA+AGG - chr5_2:56023200-56023219 Msa0777190:CDS 40.0%
TCATTGTTATGCACAGAGGA+TGG + chr5_2:56023200-56023219 Msa0777180:intron 40.0%
AAATGTGGTTTCAAGAAGGG+GGG - chr5_2:56023440-56023459 None:intergenic 40.0%
AAGTGTCCGTGTTCAAAATG+TGG - chr5_2:56023455-56023474 None:intergenic 40.0%
TCATATTCAGGTGTGCTTAG+TGG + chr5_2:56023539-56023558 Msa0777180:intron 40.0%
AAATCTCAAAACTGTGGAGG+AGG - chr5_2:56023727-56023746 None:intergenic 40.0%
CTGAAATCTCAAAACTGTGG+AGG - chr5_2:56023730-56023749 None:intergenic 40.0%
! CGTCTGAAATCTCAAAACTG+TGG - chr5_2:56023733-56023752 None:intergenic 40.0%
! GAGATTTCAGACGGCAATTT+TGG + chr5_2:56023740-56023759 Msa0777180:intron 40.0%
! ATAATAGGTGTTGTGGCCTA+TGG + chr5_2:56024042-56024061 Msa0777180:intron 40.0%
! CTTCTAGAAGTAGACTCTAG+AGG + chr5_2:56024485-56024504 Msa0777180:intron 40.0%
! TAGAAGTAGACTCTAGAGGA+AGG + chr5_2:56024489-56024508 Msa0777180:intron 40.0%
!! GAAAAATTTTCTGGAGGAGG+AGG + chr5_2:56024511-56024530 Msa0777180:intron 40.0%
!! TGTGGCTTGGATTGCATTTT+GGG - chr5_2:56024832-56024851 None:intergenic 40.0%
!! TTGTGGCTTGGATTGCATTT+TGG - chr5_2:56024833-56024852 None:intergenic 40.0%
!!! CCTCTGTTGTTTTTCTGCTA+TGG - chr5_2:56024866-56024885 None:intergenic 40.0%
CCATAGCAGAAAAACAACAG+AGG + chr5_2:56024863-56024882 Msa0777180:intron 40.0%
! TCTCTGTTTGTGCCTGTTTT+TGG - chr5_2:56024935-56024954 None:intergenic 40.0%
GGCTCATAGTCATTGATAAG+TGG - chr5_2:56025127-56025146 None:intergenic 40.0%
TTTCCTGTTTGTGTTGAGCA+TGG - chr5_2:56025148-56025167 None:intergenic 40.0%
GGATCTAGAGGTTTGTGAAA+AGG - chr5_2:56025715-56025734 None:intergenic 40.0%
GGAATCAGTGAAGAAAAGGA+CGG + chr5_2:56026160-56026179 Msa0777180:intron 40.0%
GAATCAGTGAAGAAAAGGAC+GGG + chr5_2:56026161-56026180 Msa0777180:intron 40.0%
CGGGAATCAAAGAAACATTG+AGG + chr5_2:56026180-56026199 Msa0777180:intron 40.0%
AAGAGATGGAAACGTGTTTG+AGG + chr5_2:56026227-56026246 Msa0777180:intron 40.0%
AGAGATGGAAACGTGTTTGA+GGG + chr5_2:56026228-56026247 Msa0777180:intron 40.0%
! GAAACGTGTTTGAGGGTTTT+TGG + chr5_2:56026235-56026254 Msa0777180:intron 40.0%
!!! GTTTGAGGGTTTTTGGAACA+TGG + chr5_2:56026242-56026261 Msa0777180:intron 40.0%
! TTTGGAACATGGAGAAGGTT+TGG + chr5_2:56026253-56026272 Msa0777180:intron 40.0%
AGGACAAAAGAAAAGGATGG+AGG + chr5_2:56026363-56026382 Msa0777180:intron 40.0%
GGACAAAAGAAAAGGATGGA+GGG + chr5_2:56026364-56026383 Msa0777180:intron 40.0%
TTAGTGCGCCAAATATTGTG+AGG + chr5_2:56026421-56026440 Msa0777180:intron 40.0%
AAAAAACGCGTTAATTGCGG+CGG - chr5_2:56026634-56026653 None:intergenic 40.0%
ATTCAATCTTCTCTTAGGGG+AGG + chr5_2:56027044-56027063 Msa0777180:intron 40.0%
TTCAATCTTCTCTTAGGGGA+GGG + chr5_2:56027045-56027064 Msa0777180:intron 40.0%
!!! TGTTTTGAAAAAGAGGGGAG+GGG + chr5_2:56027088-56027107 Msa0777180:intron 40.0%
! TTCAAGCATCTTTGAAGGGA+TGG + chr5_2:56027148-56027167 Msa0777180:intron 40.0%
ATAGACGTTTCAACGAGTCA+TGG + chr5_2:56027244-56027263 Msa0777180:intron 40.0%
GGAAGGTTAAACTTGGAAGA+AGG + chr5_2:56027578-56027597 Msa0777180:CDS 40.0%
ATTGATAAGGTTGCTAAGGG+TGG - chr5_2:56027662-56027681 None:intergenic 40.0%
CCCTTAGCAACCTTATCAAT+AGG + chr5_2:56027662-56027681 Msa0777180:CDS 40.0%
TTCTTAGGAGCTCACACAAT+TGG + chr5_2:56028383-56028402 Msa0777180:intron 40.0%
AGGAATTGTCCAAGGAAAAG+TGG + chr5_2:56028485-56028504 Msa0777180:CDS 40.0%
!!! GGTTTGGTGTTTTGAAGTCT+AGG - chr5_2:56028538-56028557 None:intergenic 40.0%
! GATCAAGAGCTTTTCAATGG+AGG + chr5_2:56028614-56028633 Msa0777180:CDS 40.0%
!! TGGAGGATCTACTGATTCAT+TGG + chr5_2:56028631-56028650 Msa0777180:CDS 40.0%
GGAAATAACAAGCCTCTTAC+CGG + chr5_2:56028719-56028738 Msa0777180:CDS 40.0%
! TCTAATCTCCCCTTTTGATC+CGG - chr5_2:56028741-56028760 None:intergenic 40.0%
GATCAAAAGGGGAGATTAGA+AGG + chr5_2:56028741-56028760 Msa0777180:CDS 40.0%
AGCAACAGCAGAGTGAACAA+CGG - chr5_2:56018009-56018028 None:intergenic 45.0%
GATGACACACCCTCCAATAA+AGG + chr5_2:56019646-56019665 Msa0777180:CDS 45.0%
AACAGAATCACGAGCAGCAA+TGG - chr5_2:56019788-56019807 None:intergenic 45.0%
TCTACAGTCTCTCTACATCG+AGG - chr5_2:56020084-56020103 None:intergenic 45.0%
AGAGACTGTAGACTAGGATG+TGG + chr5_2:56020092-56020111 Msa0777180:intron 45.0%
!! ACGTGTGTTGGCTATGTATG+TGG - chr5_2:56020275-56020294 None:intergenic 45.0%
CATACATAGCCAACACACGT+TGG + chr5_2:56020275-56020294 Msa0777180:intron 45.0%
TCGAACACACAACCTTCTGA+GGG - chr5_2:56020328-56020347 None:intergenic 45.0%
ATCGAACACACAACCTTCTG+AGG - chr5_2:56020329-56020348 None:intergenic 45.0%
GTACCTTTGTAAGTGCCCTT+TGG + chr5_2:56020392-56020411 Msa0777180:intron 45.0%
! TTCAAGCATCTTTGAGGGGA+GGG - chr5_2:56020640-56020659 None:intergenic 45.0%
! ATTCAAGCATCTTTGAGGGG+AGG - chr5_2:56020641-56020660 None:intergenic 45.0%
! AAAAAACGCGTGTTTTCCGG+CGG + chr5_2:56020843-56020862 Msa0777180:intron 45.0%
GCCACAATTGTACATAGTGG+CGG - chr5_2:56020898-56020917 None:intergenic 45.0%
TCCAAAGCTTAATGTAGCGC+CGG + chr5_2:56021936-56021955 Msa0777180:intron 45.0%
!! TAATGTAGCGCCGGTAATAG+TGG + chr5_2:56021945-56021964 Msa0777180:intron 45.0%
CTGATCATGTCTGAACGTGA+TGG + chr5_2:56022091-56022110 Msa0777180:intron 45.0%
AATAAGGCAGCAGCTAACTC+TGG + chr5_2:56022304-56022323 Msa0777180:intron 45.0%
GGCTACATTAAAGCGAAGGA+AGG - chr5_2:56022343-56022362 Msa0777190:CDS 45.0%
TGCAACTATGGAGGCTCAAA+TGG - chr5_2:56022377-56022396 Msa0777190:CDS 45.0%
!!! ATGGAGTTTGGCTCTTTTCG+AGG - chr5_2:56022442-56022461 Msa0777190:intron 45.0%
CATACTACCACACGACTTAG+CGG - chr5_2:56022466-56022485 Msa0777190:intron 45.0%
!!! ACCGATGGCTTTAACCCTTT+TGG - chr5_2:56022585-56022604 Msa0777190:intron 45.0%
AAAAGGGTTAAAGCCATCGG+TGG + chr5_2:56022584-56022603 Msa0777180:intron 45.0%
GATCCTCGAAATGTACGACT+TGG - chr5_2:56022615-56022634 Msa0777190:intron 45.0%
! GTCAAACGTTTTCCATGCCT+CGG + chr5_2:56022659-56022678 Msa0777180:intron 45.0%
TTCCATGCCTCGGAATCTTT+AGG + chr5_2:56022669-56022688 Msa0777180:intron 45.0%
ATCCTAAAGATTCCGAGGCA+TGG - chr5_2:56022674-56022693 Msa0777190:intron 45.0%
GCATTGGATGGTAACCAAGA+TGG - chr5_2:56022708-56022727 Msa0777190:intron 45.0%
! ATGAGTTGGCATGCATTGGA+TGG - chr5_2:56022720-56022739 Msa0777190:intron 45.0%
! GTCTATGAGTTGGCATGCAT+TGG - chr5_2:56022724-56022743 Msa0777190:intron 45.0%
ATGCCAACTCATAGACTCTG+CGG + chr5_2:56022728-56022747 Msa0777180:intron 45.0%
AAACCGCAGAGTCTATGAGT+TGG - chr5_2:56022734-56022753 Msa0777190:intron 45.0%
CACTAAAGCCAAGATTGCAG+AGG - chr5_2:56022773-56022792 Msa0777190:intron 45.0%
!! CTCTGCAATCTTGGCTTTAG+TGG + chr5_2:56022771-56022790 Msa0777180:intron 45.0%
CCCTTCATTGTTATGCACAG+AGG + chr5_2:56023196-56023215 Msa0777180:intron 45.0%
TGGAATTGGTCGAAACAACC+TGG - chr5_2:56023237-56023256 Msa0777190:CDS 45.0%
ACCAAATGTAATCGCGTCTG+AGG - chr5_2:56023336-56023355 None:intergenic 45.0%
TTTCAAGAAGGGGGGAACAT+GGG - chr5_2:56023432-56023451 None:intergenic 45.0%
!! AGACGGCAATTTTGGTGCAA+CGG + chr5_2:56023748-56023767 Msa0777180:intron 45.0%
! CACAGCACCATGTTTTATGG+TGG - chr5_2:56024009-56024028 None:intergenic 45.0%
! CACCATAAAACATGGTGCTG+TGG + chr5_2:56024007-56024026 Msa0777180:intron 45.0%
! GACCACAGCACCATGTTTTA+TGG - chr5_2:56024012-56024031 None:intergenic 45.0%
!! AAATTTTCTGGAGGAGGAGG+AGG + chr5_2:56024514-56024533 Msa0777180:intron 45.0%
GCTATGGTGTGTCTTTGTTG+TGG - chr5_2:56024850-56024869 None:intergenic 45.0%
!!! TGTGCCTGTTTTTGGTGTCT+GGG - chr5_2:56024927-56024946 None:intergenic 45.0%
!!! TTGTGCCTGTTTTTGGTGTC+TGG - chr5_2:56024928-56024947 None:intergenic 45.0%
GAGTAGTTAAGAGGAGGTAG+TGG - chr5_2:56024968-56024987 None:intergenic 45.0%
TGTTGAGGAGAAAAGTAGGG+TGG + chr5_2:56025196-56025215 Msa0777180:intron 45.0%
ACCTCTAGATCCTCCTGATT+TGG + chr5_2:56025723-56025742 Msa0777180:intron 45.0%
GTCGAAGTCTTCTCTCAACT+TGG - chr5_2:56026037-56026056 None:intergenic 45.0%
AGTTGAGAGAAGACTTCGAC+AGG + chr5_2:56026037-56026056 Msa0777180:intron 45.0%
GTTGAGAGAAGACTTCGACA+GGG + chr5_2:56026038-56026057 Msa0777180:intron 45.0%
TCGGTTGAAGATTGGGTTTG+AGG + chr5_2:56026084-56026103 Msa0777180:intron 45.0%
CGGTTGAAGATTGGGTTTGA+GGG + chr5_2:56026085-56026104 Msa0777180:intron 45.0%
TTGGGTTTGAGGGAATCGAA+TGG + chr5_2:56026095-56026114 Msa0777180:intron 45.0%
TGGGTTTGAGGGAATCGAAT+GGG + chr5_2:56026096-56026115 Msa0777180:intron 45.0%
TTTGAGGGAATCGAATGGGT+TGG + chr5_2:56026100-56026119 Msa0777180:intron 45.0%
! TTGAGGGAATCGAATGGGTT+GGG + chr5_2:56026101-56026120 Msa0777180:intron 45.0%
!!! GGGTTTTTGGAACATGGAGA+AGG + chr5_2:56026248-56026267 Msa0777180:intron 45.0%
GCGCCAAATATTGTGAGGTT+AGG + chr5_2:56026426-56026445 Msa0777180:intron 45.0%
CTATCTACAGTACATTGCGG+CGG - chr5_2:56026543-56026562 None:intergenic 45.0%
CCGCTATCTACAGTACATTG+CGG - chr5_2:56026546-56026565 None:intergenic 45.0%
CCGCAATGTACTGTAGATAG+CGG + chr5_2:56026543-56026562 Msa0777180:intron 45.0%
! CAATGTACTGTAGATAGCGG+CGG + chr5_2:56026546-56026565 Msa0777180:intron 45.0%
CCACTATATCCGGTGTATTG+CGG - chr5_2:56026584-56026603 None:intergenic 45.0%
CAATACACCGGATATAGTGG+CGG + chr5_2:56026584-56026603 Msa0777180:intron 45.0%
AATACACCGGATATAGTGGC+GGG + chr5_2:56026585-56026604 Msa0777180:intron 45.0%
!! TAATTGCGGCGGTTTTGTAC+TGG - chr5_2:56026623-56026642 None:intergenic 45.0%
TCAATCTTCTCTTAGGGGAG+GGG + chr5_2:56027046-56027065 Msa0777180:intron 45.0%
ACTGTTTGCATCATTGAGGC+TGG - chr5_2:56027617-56027636 None:intergenic 45.0%
AGCCTCAATGATGCAAACAG+TGG + chr5_2:56027616-56027635 Msa0777180:CDS 45.0%
CACCACTGTTTGCATCATTG+AGG - chr5_2:56027621-56027640 None:intergenic 45.0%
AGGTTGCTAAGGGTGGAAAA+GGG - chr5_2:56027655-56027674 None:intergenic 45.0%
AAGGTTGCTAAGGGTGGAAA+AGG - chr5_2:56027656-56027675 None:intergenic 45.0%
AGCTCAAGGACTCTCTACTA+AGG + chr5_2:56027690-56027709 Msa0777180:CDS 45.0%
AGGACTCTCTACTAAGGACA+TGG + chr5_2:56027696-56027715 Msa0777180:CDS 45.0%
ACTCTCTACTAAGGACATGG+TGG + chr5_2:56027699-56027718 Msa0777180:intron 45.0%
!! GTACTCTGACTCTAGAGTCT+TGG + chr5_2:56028059-56028078 Msa0777180:intron 45.0%
AAAGAGAAAATGGACCCTGG+TGG + chr5_2:56028213-56028232 Msa0777180:intron 45.0%
AGGAGCTCACACAATTGGAA+AGG + chr5_2:56028388-56028407 Msa0777180:intron 45.0%
CTCACACAATTGGAAAGGCA+AGG + chr5_2:56028393-56028412 Msa0777180:intron 45.0%
TATTTGCCAAGTCAAGGCAG+AGG + chr5_2:56028465-56028484 Msa0777180:intron 45.0%
ACAATTCCTCTGCCTTGACT+TGG - chr5_2:56028474-56028493 None:intergenic 45.0%
AAGCCTCTTACCGGATCAAA+AGG + chr5_2:56028728-56028747 Msa0777180:CDS 45.0%
AGCCTCTTACCGGATCAAAA+GGG + chr5_2:56028729-56028748 Msa0777180:CDS 45.0%
!!! ACAAAAATTTAATAATTTTT+TGG - chr5_2:56018919-56018938 None:intergenic 5.0%
!! TTATAATATTATTATTTCAT+AGG + chr5_2:56021279-56021298 Msa0777180:intron 5.0%
!! ATTAAAACTAATATATATAA+TGG + chr5_2:56024394-56024413 Msa0777180:intron 5.0%
!! ATAATTTACATTATATATTA+TGG - chr5_2:56026487-56026506 None:intergenic 5.0%
!!! ATGAATTAATTTTTTTTAAA+TGG - chr5_2:56026673-56026692 None:intergenic 5.0%
TGTTGCTAGAGAACCTCGCA+TGG + chr5_2:56018022-56018041 Msa0777180:CDS 50.0%
GTTGCTAGAGAACCTCGCAT+GGG + chr5_2:56018023-56018042 Msa0777180:CDS 50.0%
ACCATGTCCCCAACATAGGT+TGG + chr5_2:56018867-56018886 Msa0777180:intron 50.0%
ACCAACCTATGTTGGGGACA+TGG - chr5_2:56018871-56018890 None:intergenic 50.0%
TTTGTGAAGTCACGCGCACA+CGG - chr5_2:56019376-56019395 None:intergenic 50.0%
ATCAGCACAAGAGACCACAC+CGG - chr5_2:56019758-56019777 None:intergenic 50.0%
!! ACACGTTGGCTCAGTTGGTA+AGG + chr5_2:56020289-56020308 Msa0777180:intron 50.0%
CGAACACACAACCTTCTGAG+GGG - chr5_2:56020327-56020346 None:intergenic 50.0%
! AGTTTAGGTGGATTCGGCTC+CGG - chr5_2:56020449-56020468 None:intergenic 50.0%
! TCAAGCATCTTTGAGGGGAG+GGG - chr5_2:56020639-56020658 None:intergenic 50.0%
GCCGCCACTATGTACAATTG+TGG + chr5_2:56020894-56020913 Msa0777180:intron 50.0%
GTACAAAACGGCGGACAACA+TGG - chr5_2:56020984-56021003 None:intergenic 50.0%
!! GTTGTCCGCCGTTTTGTACT+TGG + chr5_2:56020985-56021004 Msa0777180:intron 50.0%
! TTTCTGGCGGTTAAAACCGC+CGG - chr5_2:56021131-56021150 None:intergenic 50.0%
! GTCTCGGGAGTAATTTCTGG+CGG - chr5_2:56021144-56021163 None:intergenic 50.0%
GAGGTCTCGGGAGTAATTTC+TGG - chr5_2:56021147-56021166 None:intergenic 50.0%
TCAGATGAAAGCAACGCACG+TGG - chr5_2:56021590-56021609 Msa0777190:CDS 50.0%
ACCGGCGCTACATTAAGCTT+TGG - chr5_2:56021940-56021959 Msa0777190:intron 50.0%
GCTCAAATGGCAGCACTTGT+TGG - chr5_2:56022364-56022383 Msa0777190:CDS 50.0%
TTCAAGCGGCAGTTCTGCAT+TGG - chr5_2:56022413-56022432 Msa0777190:CDS 50.0%
CGACTTAGCGGTATGGAGTT+TGG - chr5_2:56022454-56022473 Msa0777190:intron 50.0%
TACCACACGACTTAGCGGTA+TGG - chr5_2:56022461-56022480 Msa0777190:intron 50.0%
AGGAACCATTCCCATTCCCA+TGG + chr5_2:56022501-56022520 Msa0777180:intron 50.0%
AACCATTCCCATTCCCATGG+AGG + chr5_2:56022504-56022523 Msa0777180:intron 50.0%
ACCATTCCCATTCCCATGGA+GGG + chr5_2:56022505-56022524 Msa0777180:intron 50.0%
AAACTACAGCATTTGGCCGG+TGG - chr5_2:56022550-56022569 Msa0777190:intron 50.0%
GGTTAAAGCCATCGGTGGAT+AGG + chr5_2:56022589-56022608 Msa0777180:intron 50.0%
AGGCCAAGTCGTACATTTCG+AGG + chr5_2:56022609-56022628 Msa0777180:intron 50.0%
CGAGGATCTGCTGCAAATTC+AGG + chr5_2:56022627-56022646 Msa0777180:intron 50.0%
GCGACATCCTAAAGATTCCG+AGG - chr5_2:56022679-56022698 Msa0777190:intron 50.0%
GCCTCAGACGCGATTACATT+TGG + chr5_2:56023332-56023351 Msa0777180:intron 50.0%
GTTTCAAGAAGGGGGGAACA+TGG - chr5_2:56023433-56023452 None:intergenic 50.0%
GACAGAAAGCTCAGCTACGA+AGG + chr5_2:56024587-56024606 Msa0777180:intron 50.0%
! GGTGTGTCTTTGTTGTGGCT+TGG - chr5_2:56024845-56024864 None:intergenic 50.0%
ACCACCCAGACACCAAAAAC+AGG + chr5_2:56024920-56024939 Msa0777180:intron 50.0%
GAGCCATGCTCAACACAAAC+AGG + chr5_2:56025142-56025161 Msa0777180:intron 50.0%
GCCAAATCAGGAGGATCTAG+AGG - chr5_2:56025727-56025746 None:intergenic 50.0%
TTCGACAGGGACCAAAGATG+AGG + chr5_2:56026051-56026070 Msa0777180:intron 50.0%
TCGACAGGGACCAAAGATGA+GGG + chr5_2:56026052-56026071 Msa0777180:intron 50.0%
!! TCGAATGGGTTGGGTGTTTG+AGG + chr5_2:56026110-56026129 Msa0777180:intron 50.0%
!! CGAATGGGTTGGGTGTTTGA+GGG + chr5_2:56026111-56026130 Msa0777180:intron 50.0%
! GATAGCGGCGGCTAGAAAAA+CGG + chr5_2:56026558-56026577 Msa0777180:intron 50.0%
GAAAAACGGCCGCAATACAC+CGG + chr5_2:56026572-56026591 Msa0777180:intron 50.0%
CCGCAATACACCGGATATAG+TGG + chr5_2:56026581-56026600 Msa0777180:intron 50.0%
CTGTAACCCGCCACTATATC+CGG - chr5_2:56026594-56026613 None:intergenic 50.0%
!! GGATATAGTGGCGGGTTACA+GGG + chr5_2:56026593-56026612 Msa0777180:intron 50.0%
GACGTTTCAACGAGTCATGG+TGG + chr5_2:56027247-56027266 Msa0777180:intron 50.0%
TTGCTAAGGGTGGAAAAGGG+AGG - chr5_2:56027652-56027671 None:intergenic 50.0%
!! AAGGACATGGTGGCCTTATC+TGG + chr5_2:56027709-56027728 Msa0777180:intron 50.0%
CAAGGCAGAGGAATTGTCCA+AGG + chr5_2:56028477-56028496 Msa0777180:CDS 50.0%
GCCTCTTACCGGATCAAAAG+GGG + chr5_2:56028730-56028749 Msa0777180:CDS 50.0%
! TCCCCTTTTGATCCGGTAAG+AGG - chr5_2:56028734-56028753 None:intergenic 50.0%
GGGAGATTAGAAGGCAATGC+AGG + chr5_2:56028750-56028769 Msa0777180:CDS 50.0%
AGAAGAGATCCTCCCATGCG+AGG - chr5_2:56018038-56018057 None:intergenic 55.0%
AAGGTGGAGTCAGTATGCCC+CGG + chr5_2:56019736-56019755 Msa0777180:CDS 55.0%
TCAGCACAAGAGACCACACC+GGG - chr5_2:56019757-56019776 None:intergenic 55.0%
CCAACTGAGCCAACGTGTGT+TGG - chr5_2:56020287-56020306 None:intergenic 55.0%
!! CCAACACACGTTGGCTCAGT+TGG + chr5_2:56020284-56020303 Msa0777180:intron 55.0%
ACAGACCACTTCCCCTCAGA+AGG + chr5_2:56020313-56020332 Msa0777180:intron 55.0%
! CACAACCTTCTGAGGGGAAG+TGG - chr5_2:56020321-56020340 None:intergenic 55.0%
CACCAACACCGTCCTCACAT+CGG - chr5_2:56020360-56020379 None:intergenic 55.0%
!! GATGTGAGGACGGTGTTGGT+GGG + chr5_2:56020359-56020378 Msa0777180:intron 55.0%
!! GGCCCAAAGGGCACTTACAA+AGG - chr5_2:56020398-56020417 None:intergenic 55.0%
TTGTAAGTGCCCTTTGGGCC+CGG + chr5_2:56020398-56020417 Msa0777180:intron 55.0%
ATAGTGGCGGCTAAAACCGC+CGG - chr5_2:56020885-56020904 None:intergenic 55.0%
CAAAACGGCGGACAACATGG+CGG - chr5_2:56020981-56021000 None:intergenic 55.0%
CCACTACATGCAGAGGTCTC+GGG - chr5_2:56021159-56021178 None:intergenic 55.0%
GCCACTACATGCAGAGGTCT+CGG - chr5_2:56021160-56021179 None:intergenic 55.0%
GGACATGCCACTACATGCAG+AGG - chr5_2:56021166-56021185 None:intergenic 55.0%
!! AGCGCCGGTAATAGTGGTAG+TGG + chr5_2:56021951-56021970 Msa0777180:intron 55.0%
AAGGCAGCAGCTAACTCTGG+AGG + chr5_2:56022307-56022326 Msa0777180:intron 55.0%
CTCCATACCGCTAAGTCGTG+TGG + chr5_2:56022456-56022475 Msa0777180:intron 55.0%
CAATCGCCCTCCATGGGAAT+GGG - chr5_2:56022514-56022533 Msa0777190:intron 55.0%
ACAATCGCCCTCCATGGGAA+TGG - chr5_2:56022515-56022534 Msa0777190:intron 55.0%
TCCCATGGAGGGCGATTGTA+TGG + chr5_2:56022516-56022535 Msa0777180:intron 55.0%
CCCATACAATCGCCCTCCAT+GGG - chr5_2:56022520-56022539 Msa0777190:intron 55.0%
CCCATGGAGGGCGATTGTAT+GGG + chr5_2:56022517-56022536 Msa0777180:intron 55.0%
TCCCATACAATCGCCCTCCA+TGG - chr5_2:56022521-56022540 Msa0777190:intron 55.0%
GATGTCGCATCAGCCCATCT+TGG + chr5_2:56022691-56022710 Msa0777180:intron 55.0%
AGGATGGAACAGCATCGTCC+AGG + chr5_2:56023216-56023235 Msa0777180:intron 55.0%
TGAGCACCACCATTGTCCTG+TGG - chr5_2:56024074-56024093 None:intergenic 55.0%
!!! GCCTGTTTTTGGTGTCTGGG+TGG - chr5_2:56024924-56024943 None:intergenic 55.0%
!! GGGTTTGCTGCCAAATCAGG+AGG - chr5_2:56025736-56025755 None:intergenic 55.0%
!! AGGGGGTTTGCTGCCAAATC+AGG - chr5_2:56025739-56025758 None:intergenic 55.0%
!! CGGATATAGTGGCGGGTTAC+AGG + chr5_2:56026592-56026611 Msa0777180:intron 55.0%
!! TTGCGGCGGTTTTGTACTGG+CGG - chr5_2:56026620-56026639 None:intergenic 55.0%
! TGCAGCTTGGAGGGCCTTTT+TGG + chr5_2:56027557-56027576 Msa0777180:intron 55.0%
! GCTTGGAGGGCCTTTTTGGA+AGG + chr5_2:56027561-56027580 Msa0777180:intron 55.0%
CTAAGGGTGGAAAAGGGAGG+TGG - chr5_2:56027649-56027668 None:intergenic 55.0%
GGCATGACATGAAGTCTGCG+TGG - chr5_2:56027872-56027891 None:intergenic 55.0%
GCTAGAGAACCTCGCATGGG+AGG + chr5_2:56018026-56018045 Msa0777180:CDS 60.0%
CAGCACAAGAGACCACACCG+GGG - chr5_2:56019756-56019775 None:intergenic 60.0%
TGCCGATGTGAGGACGGTGT+TGG + chr5_2:56020355-56020374 Msa0777180:intron 60.0%
! CGATGTGAGGACGGTGTTGG+TGG + chr5_2:56020358-56020377 Msa0777180:intron 60.0%
CCCGAGACCTCTGCATGTAG+TGG + chr5_2:56021156-56021175 Msa0777180:intron 60.0%
GCCCTCCATGGGAATGGGAA+TGG - chr5_2:56022509-56022528 Msa0777190:intron 60.0%
! CGACTTGGCCTATCCACCGA+TGG - chr5_2:56022600-56022619 Msa0777190:intron 60.0%
TGTCCTGTGGCAGCTGCCAT+AGG - chr5_2:56024061-56024080 None:intergenic 60.0%
TGGCAGCTGCCACAGGACAA+TGG + chr5_2:56024062-56024081 Msa0777180:intron 60.0%
CAGCTGCCACAGGACAATGG+TGG + chr5_2:56024065-56024084 Msa0777180:intron 60.0%
!! GGTGTCTGGGTGGTGCTGTT+TGG - chr5_2:56024914-56024933 None:intergenic 60.0%
GGAGTCAGTATGCCCCGGTG+TGG + chr5_2:56019741-56019760 Msa0777180:CDS 65.0%
CGATTCCCGCTGCCGATGTG+AGG + chr5_2:56020345-56020364 Msa0777180:intron 65.0%
TCCCGCTGCCGATGTGAGGA+CGG + chr5_2:56020349-56020368 Msa0777180:intron 65.0%
ACCGTCCTCACATCGGCAGC+GGG - chr5_2:56020353-56020372 None:intergenic 65.0%
CACCGTCCTCACATCGGCAG+CGG - chr5_2:56020354-56020373 None:intergenic 65.0%
TAAGTGCCCTTTGGGCCCGG+AGG + chr5_2:56020401-56020420 Msa0777180:intron 65.0%
TCCGGTCACCACCAGGGTCA+GGG - chr5_2:56020431-56020450 None:intergenic 65.0%
TTCGGCTCCGGTCACCACCA+GGG - chr5_2:56020437-56020456 None:intergenic 65.0%
ATTCGGCTCCGGTCACCACC+AGG - chr5_2:56020438-56020457 None:intergenic 65.0%
TGGCCTATGGCAGCTGCCAC+AGG + chr5_2:56024055-56024074 Msa0777180:intron 65.0%
! CAGAGGCCTGCCACTTCTGC+TGG + chr5_2:56024880-56024899 Msa0777180:intron 65.0%
GCTGGTCCAGCAGAAGTGGC+AGG - chr5_2:56024889-56024908 None:intergenic 65.0%
GGCTGCTGGTCCAGCAGAAG+TGG - chr5_2:56024893-56024912 None:intergenic 65.0%
!! GGGTGGTGCTGTTTGGCTGC+TGG - chr5_2:56024907-56024926 None:intergenic 65.0%
GTCACCACCAGGGTCAGGGC+AGG - chr5_2:56020427-56020446 None:intergenic 70.0%
! GCCCTGACCCTGGTGGTGAC+CGG + chr5_2:56020427-56020446 Msa0777180:intron 70.0%
CTCCGGTCACCACCAGGGTC+AGG - chr5_2:56020432-56020451 None:intergenic 70.0%
GGCAGGCCTCCGGGCCCAAA+GGG - chr5_2:56020410-56020429 None:intergenic 75.0%
CAGGGTCAGGGCAGGCCTCC+GGG - chr5_2:56020419-56020438 None:intergenic 75.0%
CCAGGGTCAGGGCAGGCCTC+CGG - chr5_2:56020420-56020439 None:intergenic 75.0%
GAGGCCTGCCCTGACCCTGG+TGG + chr5_2:56020420-56020439 Msa0777180:intron 75.0%
! GGGCAGGCCTCCGGGCCCAA+AGG - chr5_2:56020411-56020430 None:intergenic 80.0%
! CCGGAGGCCTGCCCTGACCC+TGG + chr5_2:56020417-56020436 Msa0777180:intron 80.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 56017757 56028784 56017757 ID=Msa0777180;Name=Msa0777180
chr5_2 mRNA 56017757 56028784 56017757 ID=Msa0777180-mRNA-1;Parent=Msa0777180;Name=Msa0777180-mRNA-1;_AED=0.20;_eAED=0.20;_QI=107|0.66|0.5|1|0.33|0.5|4|0|293
chr5_2 exon 56017757 56018088 56017757 ID=Msa0777180-mRNA-1:exon:16566;Parent=Msa0777180-mRNA-1
chr5_2 exon 56019622 56019813 56019622 ID=Msa0777180-mRNA-1:exon:16567;Parent=Msa0777180-mRNA-1
chr5_2 exon 56027562 56027717 56027562 ID=Msa0777180-mRNA-1:exon:16568;Parent=Msa0777180-mRNA-1
chr5_2 exon 56028476 56028784 56028476 ID=Msa0777180-mRNA-1:exon:16569;Parent=Msa0777180-mRNA-1
chr5_2 five_prime_UTR 56017757 56017863 56017757 ID=Msa0777180-mRNA-1:five_prime_utr;Parent=Msa0777180-mRNA-1
chr5_2 CDS 56017864 56018088 56017864 ID=Msa0777180-mRNA-1:cds;Parent=Msa0777180-mRNA-1
chr5_2 CDS 56019622 56019813 56019622 ID=Msa0777180-mRNA-1:cds;Parent=Msa0777180-mRNA-1
chr5_2 CDS 56027562 56027717 56027562 ID=Msa0777180-mRNA-1:cds;Parent=Msa0777180-mRNA-1
chr5_2 CDS 56028476 56028784 56028476 ID=Msa0777180-mRNA-1:cds;Parent=Msa0777180-mRNA-1
Gene Sequence

>Msa0777180

ATGGCACTTTCTTCTTCTAAAGTTTCACTAAACATTTTTTGCTTTGTTTTGTTCATGTTTTTTCTTATAGATGGTTCTTTTTCTCAACTATCTGAAAATTTCTATGCTAAGAAGTGTCCCAATGTTTTTAAGGCTGTAAATTCCGTTGTTCACTCTGCTGTTGCTAGAGAACCTCGCATGGGAGGATCTCTTCTTCGCCTTCATTTTCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTGCTACTTGATGACACACCCTCCAATAAAGGAGAGAAGAATGCACTTCCCAACAAAGATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGTCAGTATGCCCCGGTGTGGTCTCTTGTGCTGATATTCTAGCCATTGCTGCTCGTGATTCTGTTGTAAATCTTGGAGGGCCTTTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAAACAGCCAGCCTCAATGATGCAAACAGTGGTGTAATTCCACCTCCCTTTTCCACCCTTAGCAACCTTATCAATAGGTTTAAAGCTCAAGGACTCTCTACTAAGGACATGTCAAGGCAGAGGAATTGTCCAAGGAAAAGTGGTACAATAAAAGACAACAATGTAGCTGTCCTAGACTTCAAAACACCAAACCATTTTGATAACTTATACTACAAGAATCTCATCAACAAAAAGGGACTCCTTCATTCTGATCAAGAGCTTTTCAATGGAGGATCTACTGATTCATTGGTTAAAAGTTATAGCAATAATCAAAATGCATTTGAATCAGATTTTGCTACTGCAATGATTAAGATGGGAAATAACAAGCCTCTTACCGGATCAAAAGGGGAGATTAGAAGGCAATGCAGGAGAGCCAATTAA
Protein sequence

>Msa0777180

MALSSSKVSLNIFCFVLFMFFLIDGSFSQLSENFYAKKCPNVFKAVNSVVHSAVAREPRMGGSLLRLHFHDCFVNGCDGSVLLDDTPSNKGEKNALPNKDSLRGFEVIDAIKSKVESVCPGVVSCADILAIAARDSVVNLGGPFWKVKLGRRDSKTASLNDANSGVIPPPFSTLSNLINRFKAQGLSTKDMSRQRNCPRKSGTIKDNNVAVLDFKTPNHFDNLYYKNLINKKGLLHSDQELFNGGSTDSLVKSYSNNQNAFESDFATAMIKMGNNKPLTGSKGEIRRQCRRAN*