Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0777270 | sp|P22195|PER1_ARAHY | 57.595 | 316 | 124 | 5 | 9 | 323 | 10 | 316 | 6.13e-123 | 358 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0777270 | G7KFK8 | 94.154 | 325 | 17 | 1 | 1 | 325 | 1 | 323 | 0.0 | 633 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0735250 | Msa0777270 | 0.830023 | 3.707981e-55 | -8.615850e-47 |
Msa0751510 | Msa0777270 | 0.821285 | 4.378398e-53 | -8.615850e-47 |
Msa0777270 | Msa0814160 | 0.809546 | 1.793769e-50 | -8.615850e-47 |
Msa0777270 | Msa0854840 | 0.814943 | 1.190974e-51 | -8.615850e-47 |
Msa0489370 | Msa0777270 | 0.801048 | 1.081854e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0777270 | MtrunA17_Chr5g0432351 | 94.154 | 325 | 17 | 1 | 1 | 325 | 1 | 323 | 0.0 | 633 |
Msa0777270 | MtrunA17_Chr5g0432341 | 92.593 | 324 | 22 | 1 | 1 | 324 | 1 | 322 | 0.0 | 622 |
Msa0777270 | MtrunA17_Chr5g0432331 | 86.111 | 324 | 43 | 1 | 1 | 324 | 32 | 353 | 0.0 | 587 |
Msa0777270 | MtrunA17_Chr3g0107881 | 64.688 | 320 | 109 | 3 | 6 | 323 | 7 | 324 | 5.14e-145 | 411 |
Msa0777270 | MtrunA17_Chr5g0432401 | 60.883 | 317 | 85 | 1 | 6 | 322 | 8 | 285 | 2.59e-138 | 393 |
Msa0777270 | MtrunA17_Chr4g0013171 | 58.951 | 324 | 126 | 5 | 3 | 323 | 2 | 321 | 7.19e-130 | 373 |
Msa0777270 | MtrunA17_Chr4g0013181 | 62.500 | 296 | 105 | 4 | 30 | 323 | 62 | 353 | 1.47e-124 | 360 |
Msa0777270 | MtrunA17_Chr5g0432441 | 54.601 | 326 | 135 | 8 | 3 | 323 | 9 | 326 | 9.03e-118 | 342 |
Msa0777270 | MtrunA17_Chr3g0114451 | 54.517 | 321 | 138 | 5 | 6 | 323 | 3 | 318 | 1.13e-117 | 342 |
Msa0777270 | MtrunA17_Chr3g0106921 | 54.574 | 317 | 135 | 7 | 11 | 323 | 9 | 320 | 5.37e-117 | 340 |
Msa0777270 | MtrunA17_Chr2g0320071 | 54.747 | 316 | 136 | 7 | 9 | 323 | 8 | 317 | 5.12e-114 | 332 |
Msa0777270 | MtrunA17_Chr5g0438021 | 53.918 | 319 | 135 | 6 | 12 | 323 | 12 | 325 | 2.59e-113 | 331 |
Msa0777270 | MtrunA17_Chr3g0129051 | 53.822 | 314 | 137 | 5 | 13 | 323 | 14 | 322 | 1.72e-112 | 329 |
Msa0777270 | MtrunA17_Chr2g0320061 | 54.114 | 316 | 139 | 6 | 9 | 323 | 8 | 318 | 1.77e-112 | 328 |
Msa0777270 | MtrunA17_Chr2g0320051 | 52.160 | 324 | 148 | 5 | 1 | 323 | 1 | 318 | 6.28e-112 | 327 |
Msa0777270 | MtrunA17_Chr4g0013201 | 54.575 | 306 | 133 | 5 | 19 | 323 | 38 | 338 | 1.16e-111 | 327 |
Msa0777270 | MtrunA17_Chr1g0213061 | 52.978 | 319 | 141 | 7 | 8 | 323 | 9 | 321 | 9.56e-111 | 325 |
Msa0777270 | MtrunA17_Chr2g0320101 | 54.114 | 316 | 138 | 7 | 9 | 323 | 8 | 317 | 1.64e-110 | 323 |
Msa0777270 | MtrunA17_Chr2g0320031 | 51.887 | 318 | 146 | 6 | 8 | 323 | 7 | 319 | 3.36e-110 | 323 |
Msa0777270 | MtrunA17_Chr2g0320091 | 51.692 | 325 | 148 | 7 | 1 | 323 | 1 | 318 | 2.47e-109 | 321 |
Msa0777270 | MtrunA17_Chr3g0129061 | 53.943 | 317 | 138 | 6 | 10 | 323 | 11 | 322 | 8.62e-107 | 314 |
Msa0777270 | MtrunA17_Chr7g0244451 | 52.038 | 319 | 143 | 5 | 6 | 323 | 7 | 316 | 2.37e-106 | 313 |
Msa0777270 | MtrunA17_Chr7g0244461 | 50.633 | 316 | 147 | 5 | 9 | 323 | 5 | 312 | 2.52e-106 | 313 |
Msa0777270 | MtrunA17_Chr3g0129041 | 53.943 | 317 | 138 | 5 | 10 | 323 | 11 | 322 | 1.60e-105 | 311 |
Msa0777270 | MtrunA17_Chr4g0013191 | 51.815 | 303 | 137 | 6 | 25 | 323 | 43 | 340 | 1.85e-103 | 306 |
Msa0777270 | MtrunA17_Chr4g0043391 | 48.171 | 328 | 161 | 6 | 1 | 323 | 1 | 324 | 4.11e-102 | 303 |
Msa0777270 | MtrunA17_Chr7g0224371 | 48.734 | 316 | 156 | 6 | 9 | 323 | 12 | 322 | 4.54e-102 | 302 |
Msa0777270 | MtrunA17_Chr5g0404721 | 51.803 | 305 | 135 | 5 | 27 | 323 | 30 | 330 | 5.77e-102 | 302 |
Msa0777270 | MtrunA17_Chr4g0038171 | 49.527 | 317 | 151 | 6 | 12 | 323 | 9 | 321 | 1.62e-101 | 301 |
Msa0777270 | MtrunA17_Chr3g0106901 | 51.402 | 321 | 147 | 5 | 4 | 323 | 11 | 323 | 3.29e-101 | 300 |
Msa0777270 | MtrunA17_Chr8g0372601 | 50.492 | 305 | 139 | 5 | 27 | 323 | 30 | 330 | 5.30e-99 | 295 |
Msa0777270 | MtrunA17_Chr4g0038161 | 47.561 | 328 | 159 | 7 | 1 | 323 | 1 | 320 | 1.77e-96 | 288 |
Msa0777270 | MtrunA17_Chr4g0038151 | 47.812 | 320 | 155 | 7 | 9 | 323 | 9 | 321 | 3.09e-96 | 287 |
Msa0777270 | MtrunA17_Chr2g0292091 | 46.667 | 315 | 157 | 5 | 17 | 323 | 14 | 325 | 4.66e-95 | 285 |
Msa0777270 | MtrunA17_Chr7g0258811 | 45.231 | 325 | 166 | 5 | 8 | 323 | 50 | 371 | 5.41e-95 | 286 |
Msa0777270 | MtrunA17_Chr4g0070951 | 48.640 | 331 | 147 | 8 | 7 | 324 | 10 | 330 | 4.67e-94 | 282 |
Msa0777270 | MtrunA17_Chr2g0291751 | 46.154 | 325 | 164 | 5 | 8 | 324 | 10 | 331 | 2.13e-92 | 279 |
Msa0777270 | MtrunA17_Chr1g0155611 | 46.885 | 305 | 151 | 4 | 27 | 323 | 46 | 347 | 8.27e-92 | 277 |
Msa0777270 | MtrunA17_Chr2g0292181 | 48.208 | 307 | 148 | 5 | 25 | 323 | 36 | 339 | 1.67e-90 | 274 |
Msa0777270 | MtrunA17_Chr1g0175561 | 45.223 | 314 | 160 | 5 | 19 | 323 | 16 | 326 | 1.77e-90 | 273 |
Msa0777270 | MtrunA17_Chr2g0292251 | 46.602 | 309 | 154 | 4 | 25 | 325 | 26 | 331 | 3.81e-90 | 273 |
Msa0777270 | MtrunA17_Chr5g0402571 | 46.988 | 332 | 161 | 9 | 1 | 323 | 1 | 326 | 5.53e-89 | 269 |
Msa0777270 | MtrunA17_Chr2g0299691 | 46.226 | 318 | 155 | 7 | 18 | 324 | 47 | 359 | 9.28e-89 | 270 |
Msa0777270 | MtrunA17_Chr2g0292101 | 46.057 | 317 | 160 | 5 | 17 | 325 | 15 | 328 | 1.73e-88 | 268 |
Msa0777270 | MtrunA17_Chr2g0292271 | 45.631 | 309 | 157 | 4 | 25 | 325 | 27 | 332 | 2.81e-88 | 268 |
Msa0777270 | MtrunA17_Chr4g0068621 | 46.254 | 307 | 155 | 5 | 23 | 323 | 34 | 336 | 4.49e-88 | 267 |
Msa0777270 | MtrunA17_Chr2g0292211 | 44.937 | 316 | 163 | 4 | 16 | 323 | 29 | 341 | 8.14e-88 | 267 |
Msa0777270 | MtrunA17_Chr5g0402581 | 45.482 | 332 | 166 | 9 | 1 | 323 | 1 | 326 | 4.54e-87 | 264 |
Msa0777270 | MtrunA17_Chr2g0292241 | 45.928 | 307 | 155 | 4 | 25 | 323 | 27 | 330 | 6.35e-87 | 265 |
Msa0777270 | MtrunA17_Chr5g0400331 | 47.742 | 310 | 145 | 6 | 27 | 323 | 26 | 331 | 1.57e-86 | 263 |
Msa0777270 | MtrunA17_Chr4g0013721 | 47.059 | 306 | 148 | 5 | 25 | 323 | 98 | 396 | 2.71e-86 | 265 |
Msa0777270 | MtrunA17_Chr4g0013821 | 44.037 | 327 | 169 | 5 | 4 | 323 | 5 | 324 | 1.49e-85 | 261 |
Msa0777270 | MtrunA17_Chr2g0292111 | 43.750 | 320 | 169 | 4 | 13 | 324 | 15 | 331 | 5.64e-85 | 260 |
Msa0777270 | MtrunA17_Chr2g0292291 | 45.455 | 308 | 156 | 5 | 25 | 323 | 28 | 332 | 2.07e-83 | 256 |
Msa0777270 | MtrunA17_Chr1g0204011 | 45.399 | 326 | 160 | 11 | 6 | 323 | 7 | 322 | 2.11e-82 | 252 |
Msa0777270 | MtrunA17_Chr2g0292151 | 43.438 | 320 | 170 | 5 | 13 | 324 | 15 | 331 | 6.45e-82 | 252 |
Msa0777270 | MtrunA17_Chr2g0292261 | 44.660 | 309 | 160 | 4 | 25 | 325 | 27 | 332 | 9.36e-82 | 251 |
Msa0777270 | MtrunA17_Chr1g0188431 | 42.271 | 317 | 173 | 7 | 8 | 323 | 20 | 327 | 1.22e-79 | 245 |
Msa0777270 | MtrunA17_Chr5g0421411 | 48.070 | 285 | 134 | 8 | 50 | 323 | 4 | 285 | 2.36e-79 | 243 |
Msa0777270 | MtrunA17_Chr3g0128061 | 41.718 | 326 | 174 | 7 | 7 | 323 | 8 | 326 | 1.93e-78 | 242 |
Msa0777270 | MtrunA17_Chr1g0194271 | 41.265 | 332 | 174 | 6 | 9 | 323 | 13 | 340 | 4.17e-76 | 237 |
Msa0777270 | MtrunA17_Chr1g0194151 | 40.615 | 325 | 179 | 6 | 9 | 323 | 13 | 333 | 8.53e-75 | 233 |
Msa0777270 | MtrunA17_Chr1g0164891 | 42.105 | 304 | 161 | 7 | 31 | 323 | 93 | 392 | 1.65e-74 | 234 |
Msa0777270 | MtrunA17_Chr4g0024121 | 40.060 | 332 | 184 | 8 | 1 | 323 | 1 | 326 | 7.00e-74 | 231 |
Msa0777270 | MtrunA17_Chr5g0432321 | 90.517 | 116 | 11 | 0 | 151 | 266 | 17 | 132 | 1.21e-72 | 220 |
Msa0777270 | MtrunA17_Chr6g0477071 | 42.000 | 300 | 164 | 8 | 25 | 323 | 52 | 342 | 3.41e-72 | 227 |
Msa0777270 | MtrunA17_Chr2g0322861 | 40.896 | 335 | 176 | 12 | 1 | 323 | 62 | 386 | 4.08e-71 | 225 |
Msa0777270 | MtrunA17_Chr1g0157051 | 40.752 | 319 | 170 | 10 | 9 | 318 | 7 | 315 | 2.51e-68 | 216 |
Msa0777270 | MtrunA17_Chr8g0371381 | 41.311 | 305 | 160 | 8 | 27 | 323 | 26 | 319 | 1.60e-67 | 214 |
Msa0777270 | MtrunA17_Chr5g0405991 | 40.248 | 323 | 172 | 9 | 9 | 323 | 7 | 316 | 4.84e-67 | 213 |
Msa0777270 | MtrunA17_Chr6g0460711 | 37.304 | 319 | 187 | 6 | 10 | 323 | 4 | 314 | 8.72e-66 | 209 |
Msa0777270 | MtrunA17_Chr7g0268501 | 38.532 | 327 | 182 | 8 | 6 | 323 | 4 | 320 | 1.54e-64 | 206 |
Msa0777270 | MtrunA17_Chr7g0268521 | 38.532 | 327 | 182 | 8 | 6 | 323 | 4 | 320 | 1.54e-64 | 206 |
Msa0777270 | MtrunA17_Chr1g0148021 | 38.507 | 335 | 187 | 9 | 1 | 323 | 1 | 328 | 1.54e-63 | 204 |
Msa0777270 | MtrunA17_Chr2g0279041 | 38.788 | 330 | 179 | 10 | 7 | 323 | 6 | 325 | 2.86e-63 | 203 |
Msa0777270 | MtrunA17_Chr4g0076211 | 37.500 | 344 | 176 | 12 | 7 | 324 | 4 | 334 | 5.00e-63 | 203 |
Msa0777270 | MtrunA17_Chr7g0225221 | 39.748 | 317 | 178 | 8 | 13 | 323 | 11 | 320 | 7.92e-63 | 202 |
Msa0777270 | MtrunA17_Chr7g0254201 | 37.908 | 306 | 174 | 8 | 25 | 324 | 18 | 313 | 1.57e-61 | 198 |
Msa0777270 | MtrunA17_Chr2g0296621 | 40.984 | 305 | 159 | 10 | 27 | 323 | 50 | 341 | 1.57e-60 | 197 |
Msa0777270 | MtrunA17_Chr5g0401431 | 38.066 | 331 | 180 | 10 | 6 | 319 | 3 | 325 | 3.36e-60 | 195 |
Msa0777270 | MtrunA17_Chr4g0046131 | 40.391 | 307 | 165 | 9 | 26 | 319 | 41 | 342 | 3.61e-60 | 196 |
Msa0777270 | MtrunA17_Chr4g0072091 | 40.064 | 312 | 162 | 10 | 26 | 323 | 23 | 323 | 1.24e-59 | 194 |
Msa0777270 | MtrunA17_Chr3g0114461 | 51.309 | 191 | 89 | 3 | 134 | 323 | 5 | 192 | 1.41e-59 | 189 |
Msa0777270 | MtrunA17_Chr8g0364291 | 37.615 | 327 | 189 | 6 | 7 | 323 | 3 | 324 | 2.41e-59 | 193 |
Msa0777270 | MtrunA17_Chr4g0063671 | 37.879 | 330 | 179 | 10 | 10 | 323 | 1 | 320 | 1.13e-58 | 191 |
Msa0777270 | MtrunA17_Chr4g0053871 | 38.650 | 326 | 177 | 10 | 8 | 319 | 4 | 320 | 1.09e-57 | 189 |
Msa0777270 | MtrunA17_Chr7g0254231 | 37.458 | 299 | 176 | 8 | 27 | 323 | 22 | 311 | 1.88e-57 | 188 |
Msa0777270 | MtrunA17_Chr1g0197411 | 35.522 | 335 | 196 | 8 | 5 | 324 | 2 | 331 | 2.92e-57 | 188 |
Msa0777270 | MtrunA17_Chr2g0329641 | 36.218 | 312 | 176 | 9 | 26 | 324 | 35 | 336 | 4.50e-55 | 182 |
Msa0777270 | MtrunA17_Chr2g0316481 | 35.799 | 338 | 171 | 9 | 25 | 322 | 74 | 405 | 1.30e-53 | 181 |
Msa0777270 | MtrunA17_Chr6g0467121 | 38.111 | 307 | 173 | 11 | 22 | 323 | 69 | 363 | 1.44e-53 | 180 |
Msa0777270 | MtrunA17_Chr2g0316831 | 35.799 | 338 | 171 | 9 | 25 | 322 | 110 | 441 | 2.69e-53 | 181 |
Msa0777270 | MtrunA17_Chr6g0451571 | 35.185 | 324 | 192 | 9 | 12 | 323 | 17 | 334 | 3.56e-53 | 177 |
Msa0777270 | MtrunA17_Chr2g0316791 | 35.503 | 338 | 172 | 9 | 25 | 322 | 74 | 405 | 9.73e-53 | 178 |
Msa0777270 | MtrunA17_Chr6g0467161 | 35.179 | 307 | 185 | 10 | 22 | 323 | 39 | 336 | 4.21e-52 | 175 |
Msa0777270 | MtrunA17_Chr2g0278671 | 37.342 | 316 | 167 | 9 | 25 | 323 | 22 | 323 | 1.07e-51 | 173 |
Msa0777270 | MtrunA17_Chr1g0181511 | 34.853 | 307 | 188 | 7 | 25 | 325 | 25 | 325 | 1.75e-51 | 173 |
Msa0777270 | MtrunA17_Chr6g0467251 | 34.940 | 332 | 193 | 10 | 1 | 319 | 3 | 324 | 7.05e-51 | 172 |
Msa0777270 | MtrunA17_Chr4g0075241 | 31.803 | 305 | 196 | 5 | 26 | 323 | 28 | 327 | 1.51e-50 | 170 |
Msa0777270 | MtrunA17_Chr1g0181431 | 34.740 | 308 | 189 | 7 | 24 | 325 | 24 | 325 | 2.95e-50 | 169 |
Msa0777270 | MtrunA17_Chr2g0316191 | 35.103 | 339 | 173 | 10 | 25 | 322 | 74 | 406 | 3.10e-50 | 172 |
Msa0777270 | MtrunA17_Chr2g0279061 | 41.509 | 265 | 133 | 9 | 71 | 323 | 12 | 266 | 1.69e-49 | 166 |
Msa0777270 | MtrunA17_Chr3g0136751 | 34.835 | 333 | 191 | 8 | 3 | 323 | 4 | 322 | 2.17e-48 | 165 |
Msa0777270 | MtrunA17_Chr1g0181481 | 33.876 | 307 | 191 | 7 | 25 | 325 | 25 | 325 | 2.28e-47 | 162 |
Msa0777270 | MtrunA17_Chr2g0311251 | 33.728 | 338 | 177 | 10 | 25 | 322 | 9 | 339 | 2.25e-46 | 160 |
Msa0777270 | MtrunA17_Chr2g0311241 | 31.481 | 378 | 173 | 10 | 25 | 322 | 58 | 429 | 3.17e-45 | 159 |
Msa0777270 | MtrunA17_Chr5g0413051 | 31.935 | 310 | 193 | 8 | 27 | 323 | 73 | 377 | 4.27e-45 | 157 |
Msa0777270 | MtrunA17_Chr3g0114491 | 65.455 | 110 | 37 | 1 | 26 | 135 | 17 | 125 | 3.64e-44 | 148 |
Msa0777270 | MtrunA17_Chr2g0292281 | 41.706 | 211 | 105 | 4 | 120 | 323 | 17 | 216 | 1.60e-42 | 147 |
Msa0777270 | MtrunA17_Chr4g0074851 | 30.448 | 335 | 215 | 7 | 3 | 325 | 2 | 330 | 2.68e-42 | 149 |
Msa0777270 | MtrunA17_Chr5g0432361 | 57.143 | 112 | 43 | 2 | 211 | 322 | 2 | 108 | 7.54e-39 | 133 |
Msa0777270 | MtrunA17_Chr4g0004591 | 29.938 | 324 | 154 | 7 | 27 | 322 | 77 | 355 | 6.46e-38 | 138 |
Msa0777270 | MtrunA17_Chr2g0316811 | 35.316 | 269 | 139 | 10 | 25 | 262 | 48 | 312 | 2.34e-33 | 125 |
Msa0777270 | MtrunA17_Chr2g0316141 | 34.066 | 273 | 151 | 9 | 73 | 322 | 11 | 277 | 6.07e-31 | 117 |
Msa0777270 | MtrunA17_Chr2g0316181 | 34.066 | 273 | 151 | 9 | 73 | 322 | 11 | 277 | 6.07e-31 | 117 |
Msa0777270 | MtrunA17_Chr3g0104101 | 39.716 | 141 | 74 | 5 | 194 | 323 | 9 | 149 | 6.14e-21 | 87.4 |
Msa0777270 | MtrunA17_Chr1g0181491 | 42.105 | 114 | 63 | 3 | 25 | 138 | 10 | 120 | 5.74e-19 | 82.0 |
Msa0777270 | MtrunA17_Chr6g0468731 | 54.795 | 73 | 28 | 3 | 66 | 138 | 22 | 89 | 5.30e-18 | 77.8 |
Msa0777270 | MtrunA17_Chr1g0181501 | 29.121 | 182 | 120 | 5 | 150 | 325 | 13 | 191 | 2.39e-17 | 79.0 |
Msa0777270 | MtrunA17_Chr4g0013811 | 43.243 | 74 | 41 | 1 | 140 | 213 | 6 | 78 | 1.15e-12 | 62.8 |
Msa0777270 | MtrunA17_Chr7g0254181 | 35.294 | 102 | 60 | 3 | 95 | 196 | 27 | 122 | 1.20e-12 | 65.1 |
Msa0777270 | MtrunA17_Chr1g0196191 | 51.471 | 68 | 31 | 2 | 69 | 136 | 27 | 92 | 1.39e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0777270 | AT5G05340.1 | 54.967 | 302 | 128 | 5 | 25 | 323 | 28 | 324 | 3.17e-113 | 331 |
Msa0777270 | AT5G58390.1 | 52.516 | 318 | 142 | 7 | 10 | 323 | 4 | 316 | 2.04e-102 | 303 |
Msa0777270 | AT2G18150.1 | 49.186 | 307 | 144 | 5 | 25 | 323 | 34 | 336 | 2.66e-101 | 301 |
Msa0777270 | AT5G58400.1 | 49.080 | 326 | 154 | 8 | 3 | 323 | 7 | 325 | 3.73e-101 | 300 |
Msa0777270 | AT5G66390.1 | 50.327 | 306 | 140 | 5 | 27 | 324 | 33 | 334 | 5.36e-100 | 298 |
Msa0777270 | AT1G14550.1 | 48.607 | 323 | 159 | 6 | 4 | 323 | 3 | 321 | 5.29e-99 | 295 |
Msa0777270 | AT4G36430.1 | 49.511 | 307 | 143 | 5 | 25 | 323 | 28 | 330 | 1.37e-98 | 294 |
Msa0777270 | AT2G18140.1 | 49.836 | 305 | 141 | 5 | 27 | 323 | 35 | 335 | 2.63e-98 | 293 |
Msa0777270 | AT1G44970.1 | 47.231 | 307 | 151 | 4 | 25 | 323 | 43 | 346 | 1.17e-93 | 282 |
Msa0777270 | AT3G50990.1 | 46.326 | 313 | 156 | 5 | 21 | 325 | 35 | 343 | 6.17e-93 | 280 |
Msa0777270 | AT5G06720.1 | 44.136 | 324 | 170 | 4 | 8 | 323 | 13 | 333 | 1.09e-92 | 279 |
Msa0777270 | AT2G38390.1 | 49.351 | 308 | 144 | 5 | 25 | 323 | 29 | 333 | 2.31e-92 | 279 |
Msa0777270 | AT4G08770.1 | 48.408 | 314 | 149 | 6 | 20 | 323 | 17 | 327 | 2.42e-92 | 279 |
Msa0777270 | AT1G14540.1 | 48.173 | 301 | 150 | 5 | 25 | 323 | 19 | 315 | 2.65e-92 | 278 |
Msa0777270 | AT5G06730.1 | 42.769 | 325 | 175 | 4 | 7 | 323 | 13 | 334 | 1.57e-90 | 275 |
Msa0777270 | AT4G08780.1 | 47.452 | 314 | 152 | 6 | 20 | 323 | 17 | 327 | 2.44e-89 | 271 |
Msa0777270 | AT3G49120.1 | 45.706 | 326 | 161 | 7 | 13 | 325 | 15 | 337 | 7.78e-89 | 270 |
Msa0777270 | AT5G19890.1 | 46.012 | 326 | 157 | 8 | 8 | 323 | 11 | 327 | 1.56e-88 | 268 |
Msa0777270 | AT2G38380.1 | 48.377 | 308 | 147 | 5 | 25 | 323 | 29 | 333 | 1.58e-88 | 269 |
Msa0777270 | AT3G32980.1 | 46.945 | 311 | 152 | 6 | 25 | 325 | 29 | 336 | 1.38e-87 | 267 |
Msa0777270 | AT3G49110.1 | 46.624 | 311 | 153 | 6 | 25 | 325 | 31 | 338 | 9.37e-87 | 265 |
Msa0777270 | AT1G49570.1 | 47.712 | 306 | 144 | 8 | 25 | 319 | 46 | 346 | 1.68e-86 | 264 |
Msa0777270 | AT4G16270.1 | 46.512 | 301 | 145 | 7 | 32 | 323 | 55 | 348 | 2.53e-83 | 256 |
Msa0777270 | AT1G68850.1 | 43.284 | 335 | 165 | 10 | 9 | 323 | 6 | 335 | 4.78e-82 | 252 |
Msa0777270 | AT2G35380.1 | 44.954 | 327 | 162 | 7 | 10 | 323 | 14 | 335 | 1.52e-81 | 251 |
Msa0777270 | AT5G51890.1 | 44.615 | 325 | 160 | 11 | 10 | 323 | 7 | 322 | 4.10e-81 | 249 |
Msa0777270 | AT2G22420.1 | 40.810 | 321 | 174 | 6 | 13 | 324 | 7 | 320 | 4.41e-79 | 244 |
Msa0777270 | AT1G71695.1 | 43.322 | 307 | 165 | 6 | 21 | 323 | 38 | 339 | 5.38e-79 | 245 |
Msa0777270 | AT5G19880.1 | 44.516 | 310 | 158 | 5 | 25 | 323 | 23 | 329 | 4.52e-78 | 242 |
Msa0777270 | AT3G01190.1 | 43.092 | 304 | 158 | 7 | 27 | 323 | 26 | 321 | 6.42e-74 | 231 |
Msa0777270 | AT5G42180.1 | 40.798 | 326 | 169 | 9 | 5 | 322 | 7 | 316 | 4.95e-73 | 228 |
Msa0777270 | AT5G15180.1 | 41.231 | 325 | 177 | 7 | 7 | 323 | 11 | 329 | 1.70e-72 | 228 |
Msa0777270 | AT4G33420.1 | 42.617 | 298 | 161 | 7 | 27 | 323 | 37 | 325 | 2.29e-70 | 222 |
Msa0777270 | AT4G33420.2 | 42.617 | 298 | 161 | 7 | 27 | 323 | 84 | 372 | 1.18e-69 | 221 |
Msa0777270 | AT3G03670.1 | 37.963 | 324 | 185 | 8 | 8 | 323 | 6 | 321 | 1.74e-69 | 219 |
Msa0777270 | AT1G05240.1 | 41.667 | 300 | 158 | 7 | 30 | 319 | 29 | 321 | 4.91e-69 | 218 |
Msa0777270 | AT1G05250.1 | 41.667 | 300 | 158 | 7 | 30 | 319 | 29 | 321 | 4.91e-69 | 218 |
Msa0777270 | AT4G11290.1 | 36.533 | 323 | 192 | 6 | 10 | 323 | 8 | 326 | 7.86e-69 | 218 |
Msa0777270 | AT1G05260.1 | 38.535 | 314 | 178 | 8 | 19 | 323 | 18 | 325 | 6.44e-68 | 216 |
Msa0777270 | AT3G21770.1 | 40.323 | 310 | 170 | 8 | 19 | 319 | 21 | 324 | 6.65e-68 | 216 |
Msa0777270 | AT5G64120.1 | 42.333 | 300 | 156 | 8 | 31 | 323 | 39 | 328 | 1.33e-67 | 215 |
Msa0777270 | AT5G17820.1 | 38.509 | 322 | 169 | 9 | 9 | 323 | 14 | 313 | 1.74e-64 | 206 |
Msa0777270 | AT5G17820.2 | 38.509 | 322 | 169 | 9 | 9 | 323 | 67 | 366 | 1.07e-63 | 206 |
Msa0777270 | AT5G40150.1 | 37.662 | 308 | 174 | 7 | 25 | 323 | 30 | 328 | 1.13e-61 | 199 |
Msa0777270 | AT3G28200.1 | 36.808 | 307 | 177 | 7 | 25 | 323 | 19 | 316 | 4.34e-60 | 195 |
Msa0777270 | AT2G41480.1 | 37.764 | 331 | 181 | 10 | 8 | 323 | 8 | 328 | 9.82e-60 | 194 |
Msa0777270 | AT1G30870.1 | 40.260 | 308 | 160 | 11 | 27 | 323 | 51 | 345 | 9.84e-60 | 195 |
Msa0777270 | AT4G26010.1 | 36.392 | 316 | 186 | 10 | 10 | 323 | 7 | 309 | 7.11e-59 | 192 |
Msa0777270 | AT5G47000.1 | 37.117 | 326 | 192 | 7 | 5 | 323 | 11 | 330 | 8.42e-59 | 192 |
Msa0777270 | AT4G26010.2 | 36.392 | 316 | 186 | 10 | 10 | 323 | 35 | 337 | 1.09e-58 | 192 |
Msa0777270 | AT4G17690.1 | 38.978 | 313 | 179 | 7 | 18 | 324 | 17 | 323 | 2.76e-58 | 191 |
Msa0777270 | AT5G39580.1 | 40.532 | 301 | 161 | 10 | 31 | 323 | 29 | 319 | 3.35e-58 | 190 |
Msa0777270 | AT2G18980.1 | 36.637 | 333 | 187 | 10 | 4 | 323 | 2 | 323 | 6.67e-58 | 189 |
Msa0777270 | AT5G64100.1 | 36.095 | 338 | 184 | 11 | 7 | 323 | 5 | 331 | 3.37e-57 | 188 |
Msa0777270 | AT2G35380.2 | 44.800 | 250 | 121 | 6 | 87 | 323 | 2 | 247 | 5.99e-57 | 185 |
Msa0777270 | AT5G22410.1 | 34.936 | 312 | 182 | 9 | 25 | 325 | 26 | 327 | 6.08e-57 | 187 |
Msa0777270 | AT1G34510.1 | 35.783 | 313 | 190 | 9 | 12 | 323 | 7 | 309 | 1.19e-56 | 186 |
Msa0777270 | AT1G24110.1 | 35.625 | 320 | 188 | 8 | 16 | 323 | 9 | 322 | 3.05e-56 | 186 |
Msa0777270 | AT4G30170.1 | 37.621 | 311 | 172 | 10 | 25 | 323 | 25 | 325 | 1.02e-55 | 184 |
Msa0777270 | AT4G37530.1 | 38.535 | 314 | 169 | 9 | 25 | 323 | 25 | 329 | 2.84e-55 | 183 |
Msa0777270 | AT4G33870.1 | 34.421 | 337 | 170 | 9 | 30 | 322 | 71 | 400 | 3.94e-55 | 185 |
Msa0777270 | AT2G34060.1 | 35.380 | 342 | 192 | 11 | 3 | 320 | 7 | 343 | 1.67e-54 | 181 |
Msa0777270 | AT5G64110.1 | 37.576 | 330 | 183 | 10 | 7 | 323 | 11 | 330 | 2.53e-54 | 181 |
Msa0777270 | AT4G25980.1 | 36.218 | 312 | 181 | 8 | 23 | 323 | 22 | 326 | 1.04e-53 | 179 |
Msa0777270 | AT2G39040.1 | 38.339 | 313 | 173 | 9 | 25 | 323 | 44 | 350 | 2.24e-53 | 179 |
Msa0777270 | AT5G67400.1 | 37.576 | 330 | 182 | 11 | 10 | 323 | 8 | 329 | 2.55e-53 | 178 |
Msa0777270 | AT5G14130.1 | 36.137 | 321 | 186 | 10 | 13 | 323 | 19 | 330 | 1.74e-52 | 176 |
Msa0777270 | AT5G14130.2 | 36.137 | 321 | 186 | 10 | 13 | 323 | 60 | 371 | 3.60e-52 | 176 |
Msa0777270 | AT2G24800.1 | 34.936 | 312 | 181 | 7 | 24 | 323 | 28 | 329 | 4.71e-51 | 172 |
Msa0777270 | AT3G49960.1 | 35.629 | 334 | 185 | 12 | 10 | 323 | 6 | 329 | 1.52e-50 | 171 |
Msa0777270 | AT4G31760.1 | 33.333 | 324 | 197 | 7 | 10 | 323 | 12 | 326 | 2.76e-50 | 170 |
Msa0777270 | AT4G37520.1 | 36.422 | 313 | 177 | 8 | 25 | 323 | 25 | 329 | 4.28e-50 | 169 |
Msa0777270 | AT1G77100.1 | 35.093 | 322 | 190 | 9 | 11 | 323 | 8 | 319 | 4.51e-50 | 169 |
Msa0777270 | AT5G24070.1 | 34.557 | 327 | 187 | 11 | 14 | 325 | 23 | 337 | 2.02e-49 | 168 |
Msa0777270 | AT2G43480.1 | 33.540 | 322 | 188 | 10 | 17 | 323 | 25 | 335 | 3.34e-49 | 167 |
Msa0777270 | AT4G37520.2 | 36.102 | 313 | 175 | 9 | 25 | 323 | 25 | 326 | 4.46e-48 | 164 |
Msa0777270 | AT3G17070.1 | 32.899 | 307 | 191 | 6 | 27 | 323 | 38 | 339 | 1.36e-46 | 160 |
Msa0777270 | AT4G37530.2 | 39.080 | 261 | 137 | 8 | 25 | 270 | 25 | 278 | 2.21e-46 | 159 |
Msa0777270 | AT2G37130.1 | 34.098 | 305 | 190 | 7 | 25 | 323 | 28 | 327 | 2.64e-46 | 160 |
Msa0777270 | AT2G37130.2 | 34.333 | 300 | 186 | 7 | 30 | 323 | 2 | 296 | 2.74e-46 | 159 |
Msa0777270 | AT4G21960.1 | 31.803 | 305 | 196 | 6 | 27 | 325 | 31 | 329 | 5.73e-43 | 151 |
Msa0777270 | AT4G25980.2 | 42.458 | 179 | 96 | 5 | 23 | 201 | 67 | 238 | 1.22e-37 | 136 |
Msa0777270 | AT5G39580.2 | 43.678 | 174 | 90 | 6 | 31 | 204 | 29 | 194 | 1.92e-33 | 123 |
Msa0777270 | AT3G17070.2 | 30.108 | 279 | 179 | 7 | 55 | 323 | 4 | 276 | 6.87e-32 | 120 |
Msa0777270 | AT2G24800.2 | 40.116 | 172 | 96 | 3 | 24 | 195 | 28 | 192 | 4.84e-31 | 117 |
Find 47 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGAACAACCAAGTCTTTA+AGG | 0.111184 | 5_2:-56132598 | None:intergenic |
CCTCTAATTGAATTGTTATT+TGG | 0.117052 | 5_2:-56132060 | None:intergenic |
CAAATTCTGTCATAATAATT+TGG | 0.209369 | 5_2:-56131718 | None:intergenic |
CCAAATAACAATTCAATTAG+AGG | 0.210718 | 5_2:+56132060 | Msa0777270:CDS |
GAAGCCTCTTACTGGGAAAA+AGG | 0.220866 | 5_2:+56132955 | Msa0777270:CDS |
TTGCAAATTTGCTGCAAAAT+TGG | 0.238319 | 5_2:-56132696 | None:intergenic |
AAAGACTTGGTTGTTCTATC+TGG | 0.287245 | 5_2:+56132602 | Msa0777270:CDS |
GGTAATTTGAAGCCTCTTAC+TGG | 0.288056 | 5_2:+56132947 | Msa0777270:CDS |
GTTTCTAAAGTTAGTGCATT+TGG | 0.291735 | 5_2:-56132645 | None:intergenic |
GTAACACTTGGTACCAATAT+TGG | 0.304974 | 5_2:-56132463 | None:intergenic |
TGCAATGGTAGGACTCAAAA+TGG | 0.327673 | 5_2:-56131686 | None:intergenic |
AACATCACGTTTGCAAGCTT+TGG | 0.348583 | 5_2:-56132118 | None:intergenic |
CTATCTGGTGGCCATACAAT+TGG | 0.385587 | 5_2:+56132617 | Msa0777270:CDS |
TTAACAAGTGACTTTATGAT+TGG | 0.387848 | 5_2:-56131754 | None:intergenic |
AGATGGGTGGTAACCAATAT+TGG | 0.389155 | 5_2:+56132450 | Msa0777270:intron |
GATGACACTCCTACATTCAT+TGG | 0.405241 | 5_2:+56132021 | Msa0777270:CDS |
AGTTGACACAAAATACTATA+AGG | 0.410019 | 5_2:+56132781 | Msa0777270:CDS |
TTTATGATTGGCAATGCCTT+AGG | 0.413524 | 5_2:-56131742 | None:intergenic |
TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5_2:+56132925 | Msa0777270:CDS |
TATCATCGTTGCCGATTTGA+GGG | 0.442273 | 5_2:-56132727 | None:intergenic |
TTATCATCGTTGCCGATTTG+AGG | 0.442387 | 5_2:-56132728 | None:intergenic |
ATTTGGAAAATCCAATTGTA+TGG | 0.447875 | 5_2:-56132628 | None:intergenic |
TATTGGTACCAAGTGTTACT+AGG | 0.448839 | 5_2:+56132467 | Msa0777270:CDS |
AGCTGCTATAGCTAAAATAT+CGG | 0.458807 | 5_2:-56132151 | None:intergenic |
GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5_2:+56132926 | Msa0777270:CDS |
CTTGAAGGAGTAGAATCAAA+TGG | 0.470688 | 5_2:-56132758 | None:intergenic |
CAAAAGACATGCCCTCAAAT+CGG | 0.481735 | 5_2:+56132716 | Msa0777270:CDS |
TGCAAAATTGGTGTCTATGT+TGG | 0.490826 | 5_2:-56132684 | None:intergenic |
GTAATTTGAAGCCTCTTACT+GGG | 0.519840 | 5_2:+56132948 | Msa0777270:CDS |
TGGACTAAACCTTAAAGACT+TGG | 0.521740 | 5_2:+56132589 | Msa0777270:CDS |
GACTTGGTTGTTCTATCTGG+TGG | 0.526472 | 5_2:+56132605 | Msa0777270:CDS |
TTACGCTAACAAAGCAGTCA+TGG | 0.539113 | 5_2:-56131831 | None:intergenic |
ATATCTACGCAGGGTTGTGA+TGG | 0.543434 | 5_2:+56131985 | Msa0777270:intron |
AGCTATAGCAGCTCGAGACT+CGG | 0.543944 | 5_2:+56132161 | Msa0777270:CDS |
AAAGCTCTTGATCAGAATGA+AGG | 0.549289 | 5_2:-56132826 | None:intergenic |
CTCATTCGTGAGCCACGCAT+GGG | 0.557309 | 5_2:+56131784 | Msa0777270:CDS |
ACTCATTCGTGAGCCACGCA+TGG | 0.558250 | 5_2:+56131783 | Msa0777270:CDS |
TTATGACAGAATTTGTCCTA+AGG | 0.559599 | 5_2:+56131726 | Msa0777270:CDS |
TACGCAGGGTTGTGATGGAT+CGG | 0.567173 | 5_2:+56131990 | Msa0777270:intron |
TGGTTCTCAAAGTGATAGAT+TGG | 0.568189 | 5_2:+56132859 | Msa0777270:CDS |
GGAGTGAGCTTTGCAATGGT+AGG | 0.578435 | 5_2:-56131697 | None:intergenic |
ATTTGGAGTGAGCTTTGCAA+TGG | 0.594055 | 5_2:-56131701 | None:intergenic |
GTCTTCTCACCAATGAATGT+AGG | 0.594677 | 5_2:-56132030 | None:intergenic |
ATCACAAATTTCAAGTCACA+TGG | 0.624562 | 5_2:+56132569 | Msa0777270:CDS |
AAGGCTTTGTTGTATAAACA+AGG | 0.625131 | 5_2:+56132800 | Msa0777270:CDS |
AGCAACGATGCTCCCATGCG+TGG | 0.625399 | 5_2:-56131796 | None:intergenic |
TTCTTCAATCAACAGATGGG+TGG | 0.637118 | 5_2:+56132437 | Msa0777270:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAGTATATCTTTTTATATTG+CGG | - | chr5_2:56132263-56132282 | None:intergenic | 15.0% |
!!! | ATATGAGTTTAATTTAAACA+TGG | - | chr5_2:56132353-56132372 | None:intergenic | 15.0% |
!! | AACTCATATTTAATATTTGT+TGG | + | chr5_2:56132364-56132383 | Msa0777270:intron | 15.0% |
!!! | AAGTATATCTTTTTATATTG+CGG | - | chr5_2:56132263-56132282 | None:intergenic | 15.0% |
!!! | ATATGAGTTTAATTTAAACA+TGG | - | chr5_2:56132353-56132372 | None:intergenic | 15.0% |
!! | AACTCATATTTAATATTTGT+TGG | + | chr5_2:56132364-56132383 | Msa0777270:intron | 15.0% |
!! | CAAATTCTGTCATAATAATT+TGG | - | chr5_2:56131721-56131740 | None:intergenic | 20.0% |
!!! | GATTAAAAAGTGCAAAATAT+TGG | - | chr5_2:56132208-56132227 | None:intergenic | 20.0% |
!!! | TATTTTGCACTTTTTAATCA+TGG | + | chr5_2:56132209-56132228 | Msa0777270:intron | 20.0% |
!! | ACTTGTATTGTAGAAAAATT+TGG | - | chr5_2:56132294-56132313 | None:intergenic | 20.0% |
!! | CAAATTCTGTCATAATAATT+TGG | - | chr5_2:56131721-56131740 | None:intergenic | 20.0% |
!!! | GATTAAAAAGTGCAAAATAT+TGG | - | chr5_2:56132208-56132227 | None:intergenic | 20.0% |
!!! | TATTTTGCACTTTTTAATCA+TGG | + | chr5_2:56132209-56132228 | Msa0777270:intron | 20.0% |
!! | ACTTGTATTGTAGAAAAATT+TGG | - | chr5_2:56132294-56132313 | None:intergenic | 20.0% |
! | TTAACAAGTGACTTTATGAT+TGG | - | chr5_2:56131757-56131776 | None:intergenic | 25.0% |
!! | CCTCTAATTGAATTGTTATT+TGG | - | chr5_2:56132063-56132082 | None:intergenic | 25.0% |
! | CCAAATAACAATTCAATTAG+AGG | + | chr5_2:56132060-56132079 | Msa0777270:CDS | 25.0% |
! | ATTTGGAAAATCCAATTGTA+TGG | - | chr5_2:56132631-56132650 | None:intergenic | 25.0% |
! | AGTTGACACAAAATACTATA+AGG | + | chr5_2:56132781-56132800 | Msa0777270:CDS | 25.0% |
!! | TATGCTTTTGCTAAAGATTT+TGG | + | chr5_2:56132905-56132924 | Msa0777270:CDS | 25.0% |
! | TTAACAAGTGACTTTATGAT+TGG | - | chr5_2:56131757-56131776 | None:intergenic | 25.0% |
!! | CCTCTAATTGAATTGTTATT+TGG | - | chr5_2:56132063-56132082 | None:intergenic | 25.0% |
! | CCAAATAACAATTCAATTAG+AGG | + | chr5_2:56132060-56132079 | Msa0777270:CDS | 25.0% |
! | ATTTGGAAAATCCAATTGTA+TGG | - | chr5_2:56132631-56132650 | None:intergenic | 25.0% |
! | AGTTGACACAAAATACTATA+AGG | + | chr5_2:56132781-56132800 | Msa0777270:CDS | 25.0% |
!! | TATGCTTTTGCTAAAGATTT+TGG | + | chr5_2:56132905-56132924 | Msa0777270:CDS | 25.0% |
TTATGACAGAATTTGTCCTA+AGG | + | chr5_2:56131726-56131745 | Msa0777270:CDS | 30.0% | |
! | CAATTCAATTAGAGGTTTTG+AGG | + | chr5_2:56132068-56132087 | Msa0777270:CDS | 30.0% |
AGCTGCTATAGCTAAAATAT+CGG | - | chr5_2:56132154-56132173 | None:intergenic | 30.0% | |
ATGTTTCTTCAATCAACAGA+TGG | + | chr5_2:56132433-56132452 | Msa0777270:intron | 30.0% | |
TGTTTCTTCAATCAACAGAT+GGG | + | chr5_2:56132434-56132453 | Msa0777270:intron | 30.0% | |
AGTTGTGAGAAGTTGAAAAA+TGG | - | chr5_2:56132548-56132567 | None:intergenic | 30.0% | |
! | ATCACAAATTTCAAGTCACA+TGG | + | chr5_2:56132569-56132588 | Msa0777270:CDS | 30.0% |
ATAGAACAACCAAGTCTTTA+AGG | - | chr5_2:56132601-56132620 | None:intergenic | 30.0% | |
!! | GTTTCTAAAGTTAGTGCATT+TGG | - | chr5_2:56132648-56132667 | None:intergenic | 30.0% |
!! | TTGCAAATTTGCTGCAAAAT+TGG | - | chr5_2:56132699-56132718 | None:intergenic | 30.0% |
! | TATTTTGTGTCAACTCTTGA+AGG | - | chr5_2:56132776-56132795 | None:intergenic | 30.0% |
!! | AAGGCTTTGTTGTATAAACA+AGG | + | chr5_2:56132800-56132819 | Msa0777270:CDS | 30.0% |
TGGAGTTTCTATGATTAAGA+TGG | + | chr5_2:56132925-56132944 | Msa0777270:CDS | 30.0% | |
GGAGTTTCTATGATTAAGAT+GGG | + | chr5_2:56132926-56132945 | Msa0777270:CDS | 30.0% | |
TTATGACAGAATTTGTCCTA+AGG | + | chr5_2:56131726-56131745 | Msa0777270:CDS | 30.0% | |
! | CAATTCAATTAGAGGTTTTG+AGG | + | chr5_2:56132068-56132087 | Msa0777270:CDS | 30.0% |
AGCTGCTATAGCTAAAATAT+CGG | - | chr5_2:56132154-56132173 | None:intergenic | 30.0% | |
ATGTTTCTTCAATCAACAGA+TGG | + | chr5_2:56132433-56132452 | Msa0777270:intron | 30.0% | |
TGTTTCTTCAATCAACAGAT+GGG | + | chr5_2:56132434-56132453 | Msa0777270:intron | 30.0% | |
AGTTGTGAGAAGTTGAAAAA+TGG | - | chr5_2:56132548-56132567 | None:intergenic | 30.0% | |
! | ATCACAAATTTCAAGTCACA+TGG | + | chr5_2:56132569-56132588 | Msa0777270:CDS | 30.0% |
ATAGAACAACCAAGTCTTTA+AGG | - | chr5_2:56132601-56132620 | None:intergenic | 30.0% | |
!! | GTTTCTAAAGTTAGTGCATT+TGG | - | chr5_2:56132648-56132667 | None:intergenic | 30.0% |
!! | TTGCAAATTTGCTGCAAAAT+TGG | - | chr5_2:56132699-56132718 | None:intergenic | 30.0% |
! | TATTTTGTGTCAACTCTTGA+AGG | - | chr5_2:56132776-56132795 | None:intergenic | 30.0% |
!! | AAGGCTTTGTTGTATAAACA+AGG | + | chr5_2:56132800-56132819 | Msa0777270:CDS | 30.0% |
TGGAGTTTCTATGATTAAGA+TGG | + | chr5_2:56132925-56132944 | Msa0777270:CDS | 30.0% | |
GGAGTTTCTATGATTAAGAT+GGG | + | chr5_2:56132926-56132945 | Msa0777270:CDS | 30.0% | |
TTTATGATTGGCAATGCCTT+AGG | - | chr5_2:56131745-56131764 | None:intergenic | 35.0% | |
ATTGGAAAGAGTCCTAACAA+TGG | - | chr5_2:56132190-56132209 | None:intergenic | 35.0% | |
TTATATTGCGGTCGCAATTA+GGG | - | chr5_2:56132251-56132270 | None:intergenic | 35.0% | |
TTTATATTGCGGTCGCAATT+AGG | - | chr5_2:56132252-56132271 | None:intergenic | 35.0% | |
!!! | ATGGTTTTAAGTTAGAGTCG+CGG | - | chr5_2:56132334-56132353 | None:intergenic | 35.0% |
GTAACACTTGGTACCAATAT+TGG | - | chr5_2:56132466-56132485 | None:intergenic | 35.0% | |
! | TATTGGTACCAAGTGTTACT+AGG | + | chr5_2:56132467-56132486 | Msa0777270:CDS | 35.0% |
! | CTTTTCTTCCTAGTAACACT+TGG | - | chr5_2:56132478-56132497 | None:intergenic | 35.0% |
TGTGAGAAGTTGAAAAATGG+AGG | - | chr5_2:56132545-56132564 | None:intergenic | 35.0% | |
TGGACTAAACCTTAAAGACT+TGG | + | chr5_2:56132589-56132608 | Msa0777270:CDS | 35.0% | |
! | AAAGACTTGGTTGTTCTATC+TGG | + | chr5_2:56132602-56132621 | Msa0777270:CDS | 35.0% |
! | TGCAAAATTGGTGTCTATGT+TGG | - | chr5_2:56132687-56132706 | None:intergenic | 35.0% |
CTTGAAGGAGTAGAATCAAA+TGG | - | chr5_2:56132761-56132780 | None:intergenic | 35.0% | |
AAAGCTCTTGATCAGAATGA+AGG | - | chr5_2:56132829-56132848 | None:intergenic | 35.0% | |
! | TCTGATCAAGAGCTTTTCAA+AGG | + | chr5_2:56132833-56132852 | Msa0777270:CDS | 35.0% |
TGGTTCTCAAAGTGATAGAT+TGG | + | chr5_2:56132859-56132878 | Msa0777270:CDS | 35.0% | |
! | GTAATTTGAAGCCTCTTACT+GGG | + | chr5_2:56132948-56132967 | Msa0777270:CDS | 35.0% |
TTTATGATTGGCAATGCCTT+AGG | - | chr5_2:56131745-56131764 | None:intergenic | 35.0% | |
ATTGGAAAGAGTCCTAACAA+TGG | - | chr5_2:56132190-56132209 | None:intergenic | 35.0% | |
TTATATTGCGGTCGCAATTA+GGG | - | chr5_2:56132251-56132270 | None:intergenic | 35.0% | |
TTTATATTGCGGTCGCAATT+AGG | - | chr5_2:56132252-56132271 | None:intergenic | 35.0% | |
!!! | ATGGTTTTAAGTTAGAGTCG+CGG | - | chr5_2:56132334-56132353 | None:intergenic | 35.0% |
GTAACACTTGGTACCAATAT+TGG | - | chr5_2:56132466-56132485 | None:intergenic | 35.0% | |
! | TATTGGTACCAAGTGTTACT+AGG | + | chr5_2:56132467-56132486 | Msa0777270:CDS | 35.0% |
! | CTTTTCTTCCTAGTAACACT+TGG | - | chr5_2:56132478-56132497 | None:intergenic | 35.0% |
TGTGAGAAGTTGAAAAATGG+AGG | - | chr5_2:56132545-56132564 | None:intergenic | 35.0% | |
TGGACTAAACCTTAAAGACT+TGG | + | chr5_2:56132589-56132608 | Msa0777270:CDS | 35.0% | |
! | AAAGACTTGGTTGTTCTATC+TGG | + | chr5_2:56132602-56132621 | Msa0777270:CDS | 35.0% |
! | TGCAAAATTGGTGTCTATGT+TGG | - | chr5_2:56132687-56132706 | None:intergenic | 35.0% |
CTTGAAGGAGTAGAATCAAA+TGG | - | chr5_2:56132761-56132780 | None:intergenic | 35.0% | |
AAAGCTCTTGATCAGAATGA+AGG | - | chr5_2:56132829-56132848 | None:intergenic | 35.0% | |
! | TCTGATCAAGAGCTTTTCAA+AGG | + | chr5_2:56132833-56132852 | Msa0777270:CDS | 35.0% |
TGGTTCTCAAAGTGATAGAT+TGG | + | chr5_2:56132859-56132878 | Msa0777270:CDS | 35.0% | |
! | GTAATTTGAAGCCTCTTACT+GGG | + | chr5_2:56132948-56132967 | Msa0777270:CDS | 35.0% |
TGCAATGGTAGGACTCAAAA+TGG | - | chr5_2:56131689-56131708 | None:intergenic | 40.0% | |
! | ATTTGGAGTGAGCTTTGCAA+TGG | - | chr5_2:56131704-56131723 | None:intergenic | 40.0% |
TTACGCTAACAAAGCAGTCA+TGG | - | chr5_2:56131834-56131853 | None:intergenic | 40.0% | |
ACGTATTGTCATATCTACGC+AGG | + | chr5_2:56131975-56131994 | Msa0777270:intron | 40.0% | |
CGTATTGTCATATCTACGCA+GGG | + | chr5_2:56131976-56131995 | Msa0777270:intron | 40.0% | |
GATGACACTCCTACATTCAT+TGG | + | chr5_2:56132021-56132040 | Msa0777270:CDS | 40.0% | |
GTCTTCTCACCAATGAATGT+AGG | - | chr5_2:56132033-56132052 | None:intergenic | 40.0% | |
AACATCACGTTTGCAAGCTT+TGG | - | chr5_2:56132121-56132140 | None:intergenic | 40.0% | |
TTCTTCAATCAACAGATGGG+TGG | + | chr5_2:56132437-56132456 | Msa0777270:intron | 40.0% | |
AGATGGGTGGTAACCAATAT+TGG | + | chr5_2:56132450-56132469 | Msa0777270:intron | 40.0% | |
GAGAAGTTGAAAAATGGAGG+AGG | - | chr5_2:56132542-56132561 | None:intergenic | 40.0% | |
CAAAAGACATGCCCTCAAAT+CGG | + | chr5_2:56132716-56132735 | Msa0777270:CDS | 40.0% | |
!! | TATCATCGTTGCCGATTTGA+GGG | - | chr5_2:56132730-56132749 | None:intergenic | 40.0% |
!! | TTATCATCGTTGCCGATTTG+AGG | - | chr5_2:56132731-56132750 | None:intergenic | 40.0% |
! | CAAGAGCTTTTCAAAGGTGA+TGG | + | chr5_2:56132839-56132858 | Msa0777270:CDS | 40.0% |
! | GGTAATTTGAAGCCTCTTAC+TGG | + | chr5_2:56132947-56132966 | Msa0777270:CDS | 40.0% |
AAGCCTCTTACTGGGAAAAA+GGG | + | chr5_2:56132956-56132975 | Msa0777270:CDS | 40.0% | |
TGCAATGGTAGGACTCAAAA+TGG | - | chr5_2:56131689-56131708 | None:intergenic | 40.0% | |
! | ATTTGGAGTGAGCTTTGCAA+TGG | - | chr5_2:56131704-56131723 | None:intergenic | 40.0% |
TTACGCTAACAAAGCAGTCA+TGG | - | chr5_2:56131834-56131853 | None:intergenic | 40.0% | |
ACGTATTGTCATATCTACGC+AGG | + | chr5_2:56131975-56131994 | Msa0777270:intron | 40.0% | |
CGTATTGTCATATCTACGCA+GGG | + | chr5_2:56131976-56131995 | Msa0777270:intron | 40.0% | |
GATGACACTCCTACATTCAT+TGG | + | chr5_2:56132021-56132040 | Msa0777270:CDS | 40.0% | |
GTCTTCTCACCAATGAATGT+AGG | - | chr5_2:56132033-56132052 | None:intergenic | 40.0% | |
AACATCACGTTTGCAAGCTT+TGG | - | chr5_2:56132121-56132140 | None:intergenic | 40.0% | |
TTCTTCAATCAACAGATGGG+TGG | + | chr5_2:56132437-56132456 | Msa0777270:intron | 40.0% | |
AGATGGGTGGTAACCAATAT+TGG | + | chr5_2:56132450-56132469 | Msa0777270:intron | 40.0% | |
GAGAAGTTGAAAAATGGAGG+AGG | - | chr5_2:56132542-56132561 | None:intergenic | 40.0% | |
CAAAAGACATGCCCTCAAAT+CGG | + | chr5_2:56132716-56132735 | Msa0777270:CDS | 40.0% | |
!! | TATCATCGTTGCCGATTTGA+GGG | - | chr5_2:56132730-56132749 | None:intergenic | 40.0% |
!! | TTATCATCGTTGCCGATTTG+AGG | - | chr5_2:56132731-56132750 | None:intergenic | 40.0% |
! | CAAGAGCTTTTCAAAGGTGA+TGG | + | chr5_2:56132839-56132858 | Msa0777270:CDS | 40.0% |
! | GGTAATTTGAAGCCTCTTAC+TGG | + | chr5_2:56132947-56132966 | Msa0777270:CDS | 40.0% |
AAGCCTCTTACTGGGAAAAA+GGG | + | chr5_2:56132956-56132975 | Msa0777270:CDS | 40.0% | |
ATATCTACGCAGGGTTGTGA+TGG | + | chr5_2:56131985-56132004 | Msa0777270:intron | 45.0% | |
! | GACTTGGTTGTTCTATCTGG+TGG | + | chr5_2:56132605-56132624 | Msa0777270:CDS | 45.0% |
CTATCTGGTGGCCATACAAT+TGG | + | chr5_2:56132617-56132636 | Msa0777270:CDS | 45.0% | |
GAAGCCTCTTACTGGGAAAA+AGG | + | chr5_2:56132955-56132974 | Msa0777270:CDS | 45.0% | |
! | TCACCCTTTTTCCCAGTAAG+AGG | - | chr5_2:56132962-56132981 | None:intergenic | 45.0% |
CTGGGAAAAAGGGTGAGATT+AGG | + | chr5_2:56132966-56132985 | Msa0777270:CDS | 45.0% | |
ATATCTACGCAGGGTTGTGA+TGG | + | chr5_2:56131985-56132004 | Msa0777270:intron | 45.0% | |
! | GACTTGGTTGTTCTATCTGG+TGG | + | chr5_2:56132605-56132624 | Msa0777270:CDS | 45.0% |
CTATCTGGTGGCCATACAAT+TGG | + | chr5_2:56132617-56132636 | Msa0777270:CDS | 45.0% | |
GAAGCCTCTTACTGGGAAAA+AGG | + | chr5_2:56132955-56132974 | Msa0777270:CDS | 45.0% | |
! | TCACCCTTTTTCCCAGTAAG+AGG | - | chr5_2:56132962-56132981 | None:intergenic | 45.0% |
CTGGGAAAAAGGGTGAGATT+AGG | + | chr5_2:56132966-56132985 | Msa0777270:CDS | 45.0% | |
!! | TAAAAATTACAAAATAATAT+TGG | - | chr5_2:56131651-56131670 | None:intergenic | 5.0% |
!! | TAAAAATTACAAAATAATAT+TGG | - | chr5_2:56131651-56131670 | None:intergenic | 5.0% |
GGAGTGAGCTTTGCAATGGT+AGG | - | chr5_2:56131700-56131719 | None:intergenic | 50.0% | |
!! | TACGCAGGGTTGTGATGGAT+CGG | + | chr5_2:56131990-56132009 | Msa0777270:intron | 50.0% |
AGCTATAGCAGCTCGAGACT+CGG | + | chr5_2:56132161-56132180 | Msa0777270:CDS | 50.0% | |
! | GAGACTCGGTTGCCATTGTT+AGG | + | chr5_2:56132175-56132194 | Msa0777270:intron | 50.0% |
GGAGTGAGCTTTGCAATGGT+AGG | - | chr5_2:56131700-56131719 | None:intergenic | 50.0% | |
!! | TACGCAGGGTTGTGATGGAT+CGG | + | chr5_2:56131990-56132009 | Msa0777270:intron | 50.0% |
AGCTATAGCAGCTCGAGACT+CGG | + | chr5_2:56132161-56132180 | Msa0777270:CDS | 50.0% | |
! | GAGACTCGGTTGCCATTGTT+AGG | + | chr5_2:56132175-56132194 | Msa0777270:intron | 50.0% |
ACTCATTCGTGAGCCACGCA+TGG | + | chr5_2:56131783-56131802 | Msa0777270:CDS | 55.0% | |
CTCATTCGTGAGCCACGCAT+GGG | + | chr5_2:56131784-56131803 | Msa0777270:CDS | 55.0% | |
ACTCATTCGTGAGCCACGCA+TGG | + | chr5_2:56131783-56131802 | Msa0777270:CDS | 55.0% | |
CTCATTCGTGAGCCACGCAT+GGG | + | chr5_2:56131784-56131803 | Msa0777270:CDS | 55.0% | |
AGCAACGATGCTCCCATGCG+TGG | - | chr5_2:56131799-56131818 | None:intergenic | 60.0% | |
AGCAACGATGCTCCCATGCG+TGG | - | chr5_2:56131799-56131818 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 56131634 | 56133018 | 56131634 | ID=Msa0777270;Name=Msa0777270 |
chr5_2 | mRNA | 56131634 | 56133018 | 56131634 | ID=Msa0777270-mRNA-1;Parent=Msa0777270;Name=Msa0777270-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|3|0|325 |
chr5_2 | exon | 56131634 | 56131849 | 56131634 | ID=Msa0777270-mRNA-1:exon:16593;Parent=Msa0777270-mRNA-1 |
chr5_2 | exon | 56131997 | 56132191 | 56131997 | ID=Msa0777270-mRNA-1:exon:16594;Parent=Msa0777270-mRNA-1 |
chr5_2 | exon | 56132452 | 56133018 | 56132452 | ID=Msa0777270-mRNA-1:exon:16595;Parent=Msa0777270-mRNA-1 |
chr5_2 | CDS | 56131634 | 56131849 | 56131634 | ID=Msa0777270-mRNA-1:cds;Parent=Msa0777270-mRNA-1 |
chr5_2 | CDS | 56131997 | 56132191 | 56131997 | ID=Msa0777270-mRNA-1:cds;Parent=Msa0777270-mRNA-1 |
chr5_2 | CDS | 56132452 | 56133018 | 56132452 | ID=Msa0777270-mRNA-1:cds;Parent=Msa0777270-mRNA-1 |
Gene Sequence |
Protein sequence |