AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0777680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777680 MtrunA17_Chr5g0433051 95.549 719 17 2 1 707 1 716 0.0 1405
Msa0777680 MtrunA17_Chr5g0433071 81.956 726 104 6 1 707 1 718 0.0 1175
Msa0777680 MtrunA17_Chr3g0123411 36.795 443 261 9 268 695 710 1148 2.86e-69 246
Msa0777680 MtrunA17_Chr3g0123411 39.688 320 179 6 384 695 180 493 7.03e-54 201
Msa0777680 MtrunA17_Chr1g0156821 35.862 435 265 8 271 694 803 1234 1.38e-68 244
Msa0777680 MtrunA17_Chr1g0156821 46.091 243 130 1 454 695 370 612 1.35e-52 197
Msa0777680 MtrunA17_Chr7g0264631 38.557 402 221 10 303 688 925 1316 2.53e-68 244
Msa0777680 MtrunA17_Chr7g0264631 41.066 319 175 5 382 693 354 666 2.85e-62 226
Msa0777680 MtrunA17_Chr5g0410921 46.296 270 139 4 430 694 963 1231 6.06e-67 239
Msa0777680 MtrunA17_Chr5g0410921 37.275 389 221 8 304 681 206 582 2.10e-58 214
Msa0777680 MtrunA17_Chr4g0061601 30.129 541 351 10 159 690 101 623 8.14e-67 232
Msa0777680 MtrunA17_Chr3g0128381 34.497 487 276 16 234 693 167 637 2.23e-66 231
Msa0777680 MtrunA17_Chr1g0180601 37.562 402 225 10 303 688 899 1290 9.90e-65 233
Msa0777680 MtrunA17_Chr1g0180601 42.006 319 172 5 382 693 327 639 3.18e-63 229
Msa0777680 MtrunA17_Chr6g0451911 31.740 523 314 13 184 682 740 1243 2.16e-64 232
Msa0777680 MtrunA17_Chr6g0451911 47.162 229 119 1 455 681 359 587 2.06e-57 211
Msa0777680 MtrunA17_Chr4g0039821 32.882 517 312 13 183 688 776 1268 6.02e-64 231
Msa0777680 MtrunA17_Chr4g0039821 38.043 368 216 6 329 688 247 610 1.25e-54 203
Msa0777680 MtrunA17_Chr4g0041871 35.011 457 263 11 261 695 804 1248 1.05e-63 230
Msa0777680 MtrunA17_Chr4g0041871 42.471 259 143 2 443 695 329 587 3.70e-58 214
Msa0777680 MtrunA17_Chr4g0069351 32.271 502 325 10 197 688 774 1270 1.29e-63 230
Msa0777680 MtrunA17_Chr4g0069351 37.931 377 204 11 329 688 249 612 9.15e-57 209
Msa0777680 MtrunA17_Chr4g0069361 32.816 515 315 12 183 688 778 1270 3.98e-62 225
Msa0777680 MtrunA17_Chr4g0069361 45.570 237 126 2 455 688 376 612 1.11e-54 203
Msa0777680 MtrunA17_Chr6g0453051 36.816 402 226 10 311 696 861 1250 4.30e-62 225
Msa0777680 MtrunA17_Chr6g0453051 44.828 261 141 2 431 688 336 596 3.70e-61 223
Msa0777680 MtrunA17_Chr6g0452061 37.101 407 222 12 302 688 374 766 4.66e-62 221
Msa0777680 MtrunA17_Chr6g0452061 48.696 115 58 1 587 700 14 128 2.36e-23 105
Msa0777680 MtrunA17_Chr6g0481921 32.685 514 310 14 196 688 664 1162 4.95e-62 225
Msa0777680 MtrunA17_Chr6g0481921 41.392 273 154 4 431 698 244 515 2.45e-56 208
Msa0777680 MtrunA17_Chr7g0233901 36.744 430 236 13 273 679 806 1222 6.27e-62 225
Msa0777680 MtrunA17_Chr7g0233901 43.580 257 140 3 437 688 335 591 4.53e-58 213
Msa0777680 MtrunA17_Chr2g0285301 34.113 513 304 14 196 688 758 1256 7.34e-62 224
Msa0777680 MtrunA17_Chr2g0285301 40.441 272 158 3 431 698 337 608 1.80e-55 206
Msa0777680 MtrunA17_Chr6g0452071 34.793 434 243 13 271 680 23 440 1.05e-61 213
Msa0777680 MtrunA17_Chr4g0069411 45.802 262 138 3 431 688 1023 1284 1.07e-61 224
Msa0777680 MtrunA17_Chr4g0069411 38.158 380 199 12 329 688 267 630 1.33e-55 206
Msa0777680 MtrunA17_Chr6g0452111 31.332 533 320 15 194 699 753 1266 1.39e-61 224
Msa0777680 MtrunA17_Chr6g0452111 45.113 266 142 3 438 700 350 614 7.73e-59 216
Msa0777680 MtrunA17_Chr6g0452171 31.648 534 319 15 194 698 755 1271 7.56e-61 222
Msa0777680 MtrunA17_Chr6g0452171 47.162 229 119 1 455 681 359 587 1.03e-58 215
Msa0777680 MtrunA17_Chr6g0451881 30.885 531 325 13 193 696 740 1255 9.47e-61 221
Msa0777680 MtrunA17_Chr6g0451881 48.035 229 117 1 455 681 359 587 8.07e-59 216
Msa0777680 MtrunA17_Chr8g0366481 44.610 269 145 3 430 695 360 627 1.55e-60 214
Msa0777680 MtrunA17_Chr8g0344651 36.236 356 207 5 348 688 481 831 4.80e-60 219
Msa0777680 MtrunA17_Chr8g0344651 35.012 417 254 8 281 688 1069 1477 5.90e-54 201
Msa0777680 MtrunA17_Chr2g0285311 45.076 264 140 4 430 688 997 1260 5.57e-60 219
Msa0777680 MtrunA17_Chr2g0285311 43.882 237 130 2 455 688 367 603 1.55e-54 202
Msa0777680 MtrunA17_Chr2g0285191 46.212 264 137 4 430 688 1025 1288 1.83e-59 218
Msa0777680 MtrunA17_Chr2g0285191 43.130 262 145 3 431 688 371 632 1.65e-58 214
Msa0777680 MtrunA17_Chr3g0119381 35.484 403 228 10 314 698 255 643 2.06e-59 218
Msa0777680 MtrunA17_Chr3g0119381 46.414 237 124 2 455 688 1055 1291 2.53e-53 199
Msa0777680 MtrunA17_Chr1g0194001 44.488 254 137 3 430 679 119 372 1.54e-58 202
Msa0777680 MtrunA17_Chr6g0452141 31.068 515 305 13 194 680 752 1244 3.24e-58 214
Msa0777680 MtrunA17_Chr6g0452141 48.230 226 115 1 455 678 360 585 1.04e-57 212
Msa0777680 MtrunA17_Chr6g0452041 31.461 534 315 15 194 696 754 1267 5.25e-58 213
Msa0777680 MtrunA17_Chr6g0452041 46.725 229 120 1 455 681 359 587 5.19e-57 210
Msa0777680 MtrunA17_Chr7g0227391 28.743 501 344 7 196 688 165 660 8.81e-57 205
Msa0777680 MtrunA17_Chr6g0486841 31.078 473 310 8 233 695 776 1242 2.48e-56 208
Msa0777680 MtrunA17_Chr6g0486841 40.304 263 152 3 431 688 331 593 3.49e-52 196
Msa0777680 MtrunA17_Chr1g0193991 42.748 262 146 3 431 688 362 623 3.81e-56 207
Msa0777680 MtrunA17_Chr1g0193991 44.318 264 142 4 430 688 1016 1279 3.44e-55 205
Msa0777680 MtrunA17_Chr4g0069401 45.247 263 140 3 430 688 1006 1268 4.03e-56 207
Msa0777680 MtrunA17_Chr4g0069401 43.511 262 144 3 431 688 346 607 1.32e-55 206
Msa0777680 MtrunA17_Chr5g0412741 29.167 552 358 10 158 697 171 701 4.38e-56 203
Msa0777680 MtrunA17_Chr3g0138211 31.286 521 325 10 193 688 760 1272 5.32e-56 207
Msa0777680 MtrunA17_Chr3g0138211 41.603 262 149 3 431 688 369 630 7.16e-54 201
Msa0777680 MtrunA17_Chr1g0194031 41.603 262 149 3 431 688 357 618 1.11e-55 204
Msa0777680 MtrunA17_Chr1g0178481 32.064 499 310 14 197 679 119 604 4.30e-55 199
Msa0777680 MtrunA17_Chr6g0452081 46.411 209 104 2 455 660 25 228 5.79e-54 185
Msa0777680 MtrunA17_Chr6g0474071 41.250 240 137 2 455 690 211 450 2.13e-52 187
Msa0777680 MtrunA17_Chr1g0212701 39.925 268 157 3 423 688 367 632 2.34e-50 190
Msa0777680 MtrunA17_Chr1g0212701 31.724 435 271 12 271 688 956 1381 6.75e-48 182
Msa0777680 MtrunA17_Chr7g0222781 33.333 399 248 9 301 688 998 1389 2.04e-49 187
Msa0777680 MtrunA17_Chr7g0222781 43.220 236 131 2 455 688 404 638 8.43e-48 182
Msa0777680 MtrunA17_Chr2g0295911 34.717 265 170 3 432 694 1235 1498 7.34e-41 161
Msa0777680 MtrunA17_Chr2g0295911 24.330 448 270 16 288 704 468 877 1.16e-20 97.8
Msa0777680 MtrunA17_Chr2g0295921 36.100 241 152 2 455 694 1271 1510 5.79e-40 158
Msa0777680 MtrunA17_Chr2g0295921 29.876 241 146 4 469 704 667 889 1.59e-19 94.0
Msa0777680 MtrunA17_Chr2g0295901 34.717 265 170 3 432 694 1232 1495 5.96e-40 158
Msa0777680 MtrunA17_Chr2g0295901 28.936 235 152 3 469 702 655 875 1.01e-18 91.7
Msa0777680 MtrunA17_Chr8g0363771 33.585 265 173 3 432 694 1232 1495 2.75e-39 156
Msa0777680 MtrunA17_Chr8g0363771 30.172 232 139 4 478 704 659 872 1.30e-19 94.4
Msa0777680 MtrunA17_Chr8g0376961 35.593 236 149 3 455 688 1196 1430 4.99e-39 155
Msa0777680 MtrunA17_Chr8g0376961 30.244 205 127 4 478 680 610 800 3.52e-16 83.2
Msa0777680 MtrunA17_Chr3g0085281 35.169 236 150 3 455 688 1219 1453 7.85e-38 152
Msa0777680 MtrunA17_Chr3g0085281 30.806 211 129 5 477 684 614 810 5.65e-16 82.4
Msa0777680 MtrunA17_Chr6g0472531 27.488 422 282 7 272 672 976 1394 2.59e-37 150
Msa0777680 MtrunA17_Chr6g0472531 29.183 257 152 7 443 688 554 791 4.51e-20 95.9
Msa0777680 MtrunA17_Chr6g0463131 29.248 359 231 6 335 672 1088 1444 3.58e-37 150
Msa0777680 MtrunA17_Chr6g0463131 28.235 255 153 7 445 688 606 841 4.38e-17 86.3
Msa0777680 MtrunA17_Chr8g0359291 27.793 367 238 9 329 672 263 625 1.93e-36 145
Msa0777680 MtrunA17_Chr6g0463181 27.793 367 238 9 329 672 1065 1427 2.92e-36 147
Msa0777680 MtrunA17_Chr6g0463181 23.383 402 274 9 298 688 449 827 2.59e-17 87.0
Msa0777680 MtrunA17_Chr8g0337191 34.874 238 151 3 445 679 1225 1461 3.54e-36 147
Msa0777680 MtrunA17_Chr8g0337191 30.738 244 150 5 460 699 610 838 6.60e-22 101
Msa0777680 MtrunA17_Chr8g0337121 34.874 238 151 3 445 679 1245 1481 3.66e-36 147
Msa0777680 MtrunA17_Chr8g0337121 30.364 247 153 5 460 702 630 861 2.56e-21 99.8
Msa0777680 MtrunA17_Chr6g0463141 27.123 365 243 6 329 672 1106 1468 5.77e-36 146
Msa0777680 MtrunA17_Chr6g0463141 24.768 323 191 8 410 698 571 875 5.40e-17 85.9
Msa0777680 MtrunA17_Chr7g0262191 38.725 204 116 2 472 671 1300 1498 1.77e-35 144
Msa0777680 MtrunA17_Chr7g0262191 25.221 452 296 10 263 700 448 871 9.38e-24 107
Msa0777680 MtrunA17_Chr6g0463151 28.989 376 230 9 325 672 895 1261 2.74e-35 144
Msa0777680 MtrunA17_Chr6g0463151 24.816 407 264 12 304 695 286 665 2.70e-20 96.3
Msa0777680 MtrunA17_Chr1g0183191 38.288 222 127 3 455 671 1282 1498 9.25e-35 142
Msa0777680 MtrunA17_Chr1g0183191 22.595 447 314 8 263 700 452 875 1.66e-20 97.1
Msa0777680 MtrunA17_Chr6g0471281 27.594 424 279 10 272 672 1026 1444 9.99e-35 142
Msa0777680 MtrunA17_Chr6g0471281 28.571 252 153 6 455 698 619 851 1.43e-18 90.9
Msa0777680 MtrunA17_Chr1g0195691 35.156 256 159 5 436 688 1253 1504 1.68e-34 141
Msa0777680 MtrunA17_Chr1g0195691 29.060 234 151 3 473 705 668 887 2.80e-20 96.7
Msa0777680 MtrunA17_Chr6g0463121 33.913 230 147 4 446 672 1216 1443 2.14e-34 141
Msa0777680 MtrunA17_Chr6g0463121 30.275 218 135 4 473 688 638 840 9.40e-20 94.7
Msa0777680 MtrunA17_Chr5g0412941 32.627 236 156 3 455 688 83 317 2.72e-34 133
Msa0777680 MtrunA17_Chr6g0463391 27.926 376 246 10 335 688 273 645 3.43e-34 139
Msa0777680 MtrunA17_Chr2g0285731 34.138 290 182 4 402 683 1175 1463 7.07e-34 139
Msa0777680 MtrunA17_Chr2g0285731 29.323 266 159 7 449 700 607 857 7.35e-23 104
Msa0777680 MtrunA17_Chr3g0080941 34.375 288 180 4 402 681 1173 1459 2.22e-33 138
Msa0777680 MtrunA17_Chr3g0080941 23.791 517 327 18 196 687 372 846 6.58e-21 98.6
Msa0777680 MtrunA17_Chr8g0341751 31.599 269 180 4 422 688 1009 1275 4.58e-33 137
Msa0777680 MtrunA17_Chr8g0341751 26.838 272 176 6 425 688 388 644 1.19e-20 97.4
Msa0777680 MtrunA17_Chr8g0353541 33.191 235 155 2 455 688 826 1059 6.39e-33 136
Msa0777680 MtrunA17_Chr8g0353541 28.413 271 177 4 432 700 185 440 3.41e-24 108
Msa0777680 MtrunA17_Chr5g0412721 33.475 236 154 3 455 688 1244 1478 7.26e-33 136
Msa0777680 MtrunA17_Chr5g0412721 28.383 303 190 8 407 701 569 852 1.78e-19 94.0
Msa0777680 MtrunA17_Chr6g0463211 32.389 247 160 6 446 688 1288 1531 7.52e-33 136
Msa0777680 MtrunA17_Chr6g0463211 24.086 465 302 16 261 703 464 899 1.42e-19 94.4
Msa0777680 MtrunA17_Chr8g0341761 32.766 235 156 2 455 688 1203 1436 9.09e-33 136
Msa0777680 MtrunA17_Chr8g0341761 27.817 284 182 6 425 700 560 828 2.30e-23 106
Msa0777680 MtrunA17_Chr1g0202221 31.169 231 155 3 455 683 1133 1361 1.72e-32 135
Msa0777680 MtrunA17_Chr1g0202221 26.250 240 155 6 455 688 616 839 4.22e-16 82.8
Msa0777680 MtrunA17_Chr8g0341851 28.996 269 188 3 422 688 1185 1452 1.85e-32 135
Msa0777680 MtrunA17_Chr8g0341851 31.395 258 148 7 453 701 602 839 5.23e-22 102
Msa0777680 MtrunA17_Chr5g0445741 32.627 236 156 3 455 688 1249 1483 1.97e-32 135
Msa0777680 MtrunA17_Chr5g0445741 30.603 232 142 5 473 701 648 863 6.31e-19 92.0
Msa0777680 MtrunA17_Chr8g0353781 30.916 262 179 2 428 688 1182 1442 2.22e-32 135
Msa0777680 MtrunA17_Chr8g0353781 27.306 271 180 4 432 700 576 831 3.14e-21 99.4
Msa0777680 MtrunA17_Chr2g0333911 31.325 249 163 4 440 682 752 998 7.01e-32 133
Msa0777680 MtrunA17_Chr2g0333911 26.768 198 129 4 472 667 177 360 3.41e-13 73.6
Msa0777680 MtrunA17_Chr6g0463201 33.478 230 147 5 446 672 1222 1448 8.49e-32 133
Msa0777680 MtrunA17_Chr6g0463201 28.512 242 153 6 451 688 620 845 9.17e-19 91.7
Msa0777680 MtrunA17_Chr3g0080981 34.100 261 164 3 422 681 1205 1458 2.26e-31 132
Msa0777680 MtrunA17_Chr3g0080981 27.240 279 181 8 432 701 588 853 5.18e-21 99.0
Msa0777680 MtrunA17_Chr5g0445671 32.068 237 158 3 455 689 858 1093 2.29e-31 131
Msa0777680 MtrunA17_Chr5g0445671 30.435 230 145 6 473 701 257 472 4.52e-19 92.4
Msa0777680 MtrunA17_Chr3g0101441 32.203 236 157 3 455 688 1060 1294 3.28e-31 131
Msa0777680 MtrunA17_Chr3g0101441 26.490 302 197 7 407 701 382 665 2.51e-20 96.7
Msa0777680 MtrunA17_Chr3g0128391 41.401 157 90 1 431 585 230 386 4.43e-31 128
Msa0777680 MtrunA17_Chr3g0128391 52.336 107 51 0 587 693 447 553 8.20e-27 115
Msa0777680 MtrunA17_Chr8g0341811 31.064 235 160 2 455 688 1030 1263 6.82e-31 130
Msa0777680 MtrunA17_Chr8g0341811 26.502 283 189 5 410 688 390 657 2.94e-22 102
Msa0777680 MtrunA17_Chr3g0101471 31.780 236 158 3 455 688 1058 1292 1.12e-30 129
Msa0777680 MtrunA17_Chr3g0101471 23.316 386 248 10 330 701 312 663 2.72e-19 93.2
Msa0777680 MtrunA17_Chr6g0484351 31.716 268 175 4 422 688 383 643 3.17e-30 127
Msa0777680 MtrunA17_Chr3g0101481 32.203 236 157 3 455 688 1253 1487 3.17e-30 128
Msa0777680 MtrunA17_Chr3g0101481 31.064 235 141 5 472 702 641 858 5.31e-21 99.0
Msa0777680 MtrunA17_Chr8g0341801 31.489 235 159 2 455 688 185 418 7.21e-30 123
Msa0777680 MtrunA17_Chr8g0393151 32.963 270 152 8 431 688 1 253 1.55e-29 117
Msa0777680 MtrunA17_Chr3g0101461 31.780 236 158 3 455 688 1060 1294 1.85e-29 125
Msa0777680 MtrunA17_Chr3g0101461 28.139 231 149 4 473 701 450 665 1.90e-18 90.5
Msa0777680 MtrunA17_Chr5g0445701 34.574 188 122 1 472 659 12 198 3.37e-29 116
Msa0777680 MtrunA17_Chr8g0366471 50.000 104 52 0 578 681 10 113 2.57e-27 108
Msa0777680 MtrunA17_Chr6g0452051 42.963 135 75 1 455 587 280 414 4.32e-25 108
Msa0777680 MtrunA17_Chr8g0366451 31.068 309 185 9 290 587 156 447 5.41e-25 108
Msa0777680 MtrunA17_Chr5g0412921 31.034 232 141 5 473 701 628 843 9.16e-20 94.7
Msa0777680 MtrunA17_Chr5g0408061 32.589 224 119 6 469 674 62 271 8.15e-19 90.9
Msa0777680 MtrunA17_Chr1g0202431 32.432 259 129 10 472 701 50 291 8.62e-19 90.9
Msa0777680 MtrunA17_Chr1g0198931 32.618 233 132 10 470 690 105 324 2.87e-18 89.4
Msa0777680 MtrunA17_Chr3g0130211 28.261 230 138 6 453 673 32 243 6.56e-18 84.3
Msa0777680 MtrunA17_Chr8g0341791 29.825 171 116 3 532 700 15 183 1.39e-17 85.1
Msa0777680 MtrunA17_Chr1g0176451 32.870 216 129 9 469 673 20 230 1.64e-17 86.7
Msa0777680 MtrunA17_Chr4g0060421 25.424 295 193 10 410 686 76 361 3.03e-17 85.1
Msa0777680 MtrunA17_Chr3g0093091 26.512 215 145 6 476 686 641 846 5.44e-17 85.5
Msa0777680 MtrunA17_Chr8g0359931 31.944 216 129 8 469 673 63 271 7.76e-17 84.7
Msa0777680 MtrunA17_Chr2g0285231 50.649 77 38 0 603 679 24 100 7.81e-17 76.6
Msa0777680 MtrunA17_Chr4g0060471 26.601 203 136 6 488 686 1 194 8.10e-17 81.6
Msa0777680 MtrunA17_Chr4g0060401 25.085 295 194 10 410 686 554 839 8.40e-17 85.1
Msa0777680 MtrunA17_Chr2g0318061 31.019 216 131 8 469 673 28 236 1.14e-16 82.4
Msa0777680 MtrunA17_Chr7g0249091 29.200 250 128 10 457 673 86 319 1.31e-16 82.0
Msa0777680 MtrunA17_Chr4g0060431 25.822 213 145 6 478 686 623 826 2.11e-16 83.6
Msa0777680 MtrunA17_Chr1g0176441 33.023 215 129 10 469 673 168 377 2.84e-16 83.2
Msa0777680 MtrunA17_Chr4g0060501 25.822 213 149 5 478 686 638 845 3.28e-16 83.2
Msa0777680 MtrunA17_Chr7g0267971 32.093 215 131 10 469 673 157 366 6.62e-16 82.0
Msa0777680 MtrunA17_Chr6g0463401 23.575 386 265 10 261 638 434 797 9.65e-16 81.6
Msa0777680 MtrunA17_Chr5g0411621 27.723 303 172 13 428 699 1 287 1.30e-15 80.9
Msa0777680 MtrunA17_Chr5g0446901 30.660 212 139 6 470 673 107 318 2.15e-15 80.1
Msa0777680 MtrunA17_Chr3g0102731 29.412 221 124 6 471 673 97 303 3.04e-15 79.3
Msa0777680 MtrunA17_Chr1g0199471 30.466 279 144 13 430 673 462 725 4.14e-15 79.7
Msa0777680 MtrunA17_Chr1g0200651 28.972 214 139 7 469 673 87 296 4.71e-15 79.0
Msa0777680 MtrunA17_Chr3g0130331 28.148 270 139 9 436 681 35 273 4.82e-15 79.0
Msa0777680 MtrunA17_Chr4g0065231 27.941 272 157 10 459 705 56 313 6.87e-15 78.6
Msa0777680 MtrunA17_Chr8g0384391 28.378 222 142 8 470 681 54 268 4.30e-14 75.9
Msa0777680 MtrunA17_Chr8g0349441 27.189 217 138 4 422 637 12 209 4.55e-14 72.0
Msa0777680 MtrunA17_Chr8g0393191 26.378 254 161 9 454 684 40 290 6.22e-14 75.5
Msa0777680 MtrunA17_Chr6g0484361 27.801 241 142 7 425 652 567 788 1.45e-13 74.3
Msa0777680 MtrunA17_Chr7g0263351 28.571 259 149 10 429 673 98 334 1.17e-12 71.6
Msa0777680 MtrunA17_Chr4g0039261 29.091 220 135 9 470 676 49 260 2.48e-12 70.5
Msa0777680 MtrunA17_Chr7g0257341 26.271 236 155 8 440 669 543 765 3.17e-12 70.5
Msa0777680 MtrunA17_Chr3g0124171 26.667 255 167 6 418 665 409 650 1.05e-11 68.6
Msa0777680 MtrunA17_Chr4g0039251 28.767 219 131 8 470 673 91 299 1.89e-11 67.4
Msa0777680 MtrunA17_Chr2g0316301 26.957 230 131 7 472 680 73 286 4.41e-11 66.2
Msa0777680 MtrunA17_Chr6g0477811 28.169 213 140 6 470 673 64 272 5.80e-11 65.9
Msa0777680 MtrunA17_Chr8g0371961 34.940 83 54 0 472 554 18 100 6.42e-11 60.5
Msa0777680 MtrunA17_Chr4g0050221 27.149 221 135 7 470 673 29 240 8.98e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777680 AT5G58270.1 70.959 699 167 5 38 705 34 727 0.0 993
Msa0777680 AT4G28630.1 68.981 648 175 4 65 697 41 677 0.0 911
Msa0777680 AT4G28620.1 70.894 615 160 3 98 697 69 679 0.0 886
Msa0777680 AT1G10680.1 37.750 400 221 8 309 693 835 1221 9.76e-68 242
Msa0777680 AT1G10680.1 35.240 437 249 12 271 688 174 595 3.65e-60 220
Msa0777680 AT2G36910.1 36.567 402 229 9 303 688 868 1259 5.70e-65 234
Msa0777680 AT2G36910.1 41.066 319 175 5 382 693 296 608 2.73e-62 226
Msa0777680 AT4G25960.1 45.896 268 141 3 430 694 1004 1270 4.13e-64 232
Msa0777680 AT4G25960.1 43.130 262 145 3 431 688 374 635 3.42e-57 211
Msa0777680 AT1G27940.2 33.264 484 287 11 222 688 560 1024 5.28e-64 230
Msa0777680 AT1G27940.2 43.830 235 131 1 455 688 156 390 2.23e-55 205
Msa0777680 AT1G27940.1 33.263 475 299 8 222 688 774 1238 1.35e-63 230
Msa0777680 AT1G27940.1 43.830 235 131 1 455 688 370 604 2.81e-55 205
Msa0777680 AT3G28380.1 32.358 547 314 15 170 692 722 1236 3.54e-63 229
Msa0777680 AT3G28380.1 44.074 270 147 3 423 688 324 593 6.78e-62 225
Msa0777680 AT5G46540.1 38.520 392 212 12 314 688 861 1240 2.73e-62 226
Msa0777680 AT5G46540.1 41.221 262 150 3 431 688 330 591 1.02e-54 204
Msa0777680 AT4G18050.1 36.429 420 250 8 282 688 813 1228 3.81e-62 226
Msa0777680 AT4G18050.1 45.570 237 126 2 455 688 353 589 5.72e-57 210
Msa0777680 AT4G18050.2 36.429 420 250 8 282 688 823 1238 3.99e-62 226
Msa0777680 AT4G18050.2 45.570 237 126 2 455 688 363 599 6.41e-57 210
Msa0777680 AT3G28415.1 44.074 270 147 3 423 688 303 572 8.43e-62 225
Msa0777680 AT3G28415.1 36.432 398 215 11 306 682 825 1205 3.23e-60 220
Msa0777680 AT3G28415.2 44.074 270 147 3 423 688 311 580 9.05e-62 225
Msa0777680 AT3G28415.2 36.432 398 215 11 306 682 833 1213 3.43e-60 220
Msa0777680 AT1G28010.1 30.609 575 351 12 137 688 691 1240 1.27e-61 224
Msa0777680 AT1G28010.1 44.000 250 139 1 445 693 361 610 1.91e-56 209
Msa0777680 AT1G70610.2 29.070 516 340 9 196 696 14 518 1.79e-61 215
Msa0777680 AT3G28390.1 50.424 236 113 2 455 686 978 1213 2.63e-61 223
Msa0777680 AT3G28390.1 46.988 249 129 2 443 688 333 581 8.67e-61 222
Msa0777680 AT3G28345.1 44.569 267 145 2 443 706 345 611 3.04e-61 223
Msa0777680 AT3G28345.1 33.051 472 276 11 233 682 771 1224 1.80e-58 215
Msa0777680 AT1G02520.1 45.038 262 140 3 431 688 354 615 3.91e-61 223
Msa0777680 AT1G02520.1 45.324 278 138 5 417 688 1000 1269 1.29e-59 218
Msa0777680 AT1G02520.2 45.038 262 140 3 431 688 354 615 3.91e-61 223
Msa0777680 AT1G02520.2 45.324 278 138 5 417 688 1000 1269 1.29e-59 218
Msa0777680 AT1G02520.3 45.038 262 140 3 431 688 354 615 3.91e-61 223
Msa0777680 AT1G02520.3 45.324 278 138 5 417 688 1000 1269 1.29e-59 218
Msa0777680 AT1G70610.1 28.261 552 367 10 160 696 162 699 7.04e-61 217
Msa0777680 AT3G28860.1 47.200 250 130 1 441 688 349 598 2.64e-60 220
Msa0777680 AT3G28860.1 46.531 245 128 2 455 696 1008 1252 5.05e-60 219
Msa0777680 AT1G10680.2 35.240 437 249 12 271 688 174 595 3.13e-60 220
Msa0777680 AT1G10680.2 38.209 335 180 7 309 629 835 1156 1.93e-53 200
Msa0777680 AT1G02530.2 43.893 262 143 3 431 688 341 602 1.57e-59 217
Msa0777680 AT3G28360.1 44.788 259 140 2 433 688 321 579 3.74e-59 217
Msa0777680 AT3G28360.1 32.164 513 306 14 201 688 723 1218 2.93e-58 214
Msa0777680 AT1G02530.1 43.893 262 143 3 431 688 341 602 5.03e-59 217
Msa0777680 AT1G02530.1 44.245 278 141 5 417 688 995 1264 6.58e-59 216
Msa0777680 AT3G62150.3 43.494 269 148 3 431 695 376 644 1.06e-58 216
Msa0777680 AT3G62150.3 45.136 257 136 4 436 688 1032 1287 3.06e-57 211
Msa0777680 AT3G62150.2 43.494 269 148 3 431 695 376 644 1.06e-58 216
Msa0777680 AT3G62150.2 45.136 257 136 4 436 688 1032 1287 3.06e-57 211
Msa0777680 AT3G62150.1 43.494 269 148 3 431 695 376 644 1.06e-58 216
Msa0777680 AT3G62150.1 45.136 257 136 4 436 688 1032 1287 3.06e-57 211
Msa0777680 AT5G39040.1 29.320 515 348 8 196 701 136 643 2.56e-58 209
Msa0777680 AT4G01830.2 43.893 262 143 3 431 688 92 353 2.75e-58 213
Msa0777680 AT4G01830.2 37.500 392 217 12 314 688 607 987 3.29e-58 213
Msa0777680 AT4G01830.1 43.893 262 143 3 431 688 326 587 3.28e-58 214
Msa0777680 AT4G01830.1 37.500 392 217 12 314 688 841 1221 4.26e-58 214
Msa0777680 AT2G47000.3 42.748 262 146 3 431 688 357 618 1.62e-57 211
Msa0777680 AT2G47000.7 42.748 262 146 3 431 688 357 618 1.62e-57 211
Msa0777680 AT4G01820.2 44.275 262 142 3 431 688 321 582 2.97e-57 210
Msa0777680 AT2G47000.4 42.748 262 146 3 431 688 357 618 3.04e-57 211
Msa0777680 AT2G47000.2 42.748 262 146 3 431 688 357 618 3.15e-57 211
Msa0777680 AT2G47000.2 34.969 163 102 3 430 588 1014 1176 8.55e-21 98.6
Msa0777680 AT2G47000.6 42.748 262 146 3 431 688 357 618 3.52e-57 211
Msa0777680 AT2G47000.6 42.803 264 146 4 430 688 1014 1277 5.71e-56 207
Msa0777680 AT2G47000.5 42.748 262 146 3 431 688 357 618 3.52e-57 211
Msa0777680 AT2G47000.5 42.803 264 146 4 430 688 1014 1277 5.71e-56 207
Msa0777680 AT2G47000.1 42.748 262 146 3 431 688 357 618 3.52e-57 211
Msa0777680 AT2G47000.1 42.803 264 146 4 430 688 1014 1277 5.71e-56 207
Msa0777680 AT4G01820.1 44.275 262 142 3 431 688 321 582 6.11e-57 210
Msa0777680 AT4G01820.1 43.066 274 143 5 420 688 955 1220 6.38e-54 201
Msa0777680 AT4G25450.3 40.698 258 148 3 439 692 284 540 6.42e-54 194
Msa0777680 AT4G25450.1 40.698 258 148 3 439 692 453 709 1.22e-52 194
Msa0777680 AT3G55320.1 40.299 268 156 3 423 688 381 646 1.08e-49 189
Msa0777680 AT3G55320.1 32.874 435 266 13 271 688 968 1393 1.85e-49 188
Msa0777680 AT5G03910.1 32.321 461 276 10 224 671 176 613 3.44e-49 183
Msa0777680 AT2G39480.2 43.220 236 131 2 455 688 230 464 1.07e-48 185
Msa0777680 AT2G39480.2 41.350 237 136 2 455 688 976 1212 3.86e-47 181
Msa0777680 AT2G39480.1 43.220 236 131 2 455 688 410 644 1.37e-48 185
Msa0777680 AT2G39480.1 41.350 237 136 2 455 688 1156 1392 4.51e-47 181
Msa0777680 AT3G60970.1 37.727 220 135 2 453 671 798 1016 4.07e-38 153
Msa0777680 AT3G60970.1 26.225 408 275 8 277 679 39 425 7.26e-26 114
Msa0777680 AT3G60160.1 37.273 220 136 2 453 671 1251 1469 1.93e-37 151
Msa0777680 AT3G60160.1 26.464 427 290 7 277 699 455 861 4.54e-23 105
Msa0777680 AT3G60160.3 37.273 220 136 2 453 671 1215 1433 1.99e-37 151
Msa0777680 AT3G60160.3 26.464 427 290 7 277 699 419 825 5.12e-23 105
Msa0777680 AT1G04120.1 36.404 228 143 2 455 681 1266 1492 6.95e-36 146
Msa0777680 AT1G04120.1 26.857 350 225 7 359 700 528 854 2.82e-24 109
Msa0777680 AT1G04120.3 36.404 228 143 2 455 681 1231 1457 8.64e-36 146
Msa0777680 AT1G04120.3 29.021 286 176 6 423 700 553 819 2.13e-23 107
Msa0777680 AT3G62700.1 34.646 254 163 3 436 688 1277 1528 1.41e-35 145
Msa0777680 AT3G62700.1 23.133 415 272 12 302 700 488 871 4.58e-20 96.3
Msa0777680 AT3G21250.5 32.593 270 178 3 421 688 1174 1441 9.37e-35 142
Msa0777680 AT3G21250.5 27.333 300 188 6 407 702 554 827 1.10e-19 95.1
Msa0777680 AT3G21250.4 32.593 270 178 3 421 688 1185 1452 1.09e-34 142
Msa0777680 AT3G21250.4 28.000 300 197 5 407 702 554 838 1.69e-23 107
Msa0777680 AT3G21250.1 32.593 270 178 3 421 688 1168 1435 1.20e-34 142
Msa0777680 AT3G21250.1 27.333 300 188 6 407 702 548 821 1.41e-19 94.7
Msa0777680 AT3G21250.2 32.593 270 178 3 421 688 1179 1446 1.36e-34 142
Msa0777680 AT3G21250.2 28.000 300 197 5 407 702 548 832 2.27e-23 107
Msa0777680 AT3G21250.6 32.593 270 178 3 421 688 763 1030 1.63e-34 141
Msa0777680 AT3G21250.6 28.000 300 197 5 407 702 132 416 2.05e-23 106
Msa0777680 AT3G21250.3 32.593 270 178 3 421 688 763 1030 1.63e-34 141
Msa0777680 AT3G21250.3 28.000 300 197 5 407 702 132 416 2.05e-23 106
Msa0777680 AT2G34660.1 36.145 249 155 3 437 683 1222 1468 2.69e-34 141
Msa0777680 AT2G34660.1 28.472 288 182 7 407 688 566 835 2.44e-25 113
Msa0777680 AT2G34660.2 36.145 249 155 3 437 683 1222 1468 2.69e-34 141
Msa0777680 AT2G34660.2 28.472 288 182 7 407 688 566 835 2.44e-25 113
Msa0777680 AT2G34660.3 36.145 249 155 3 437 683 935 1181 2.98e-34 141
Msa0777680 AT2G34660.3 28.472 288 182 7 407 688 279 548 1.83e-25 113
Msa0777680 AT1G04120.2 35.897 234 131 4 455 681 1266 1487 4.33e-33 137
Msa0777680 AT1G04120.2 26.857 350 225 7 359 700 528 854 3.20e-24 109
Msa0777680 AT1G30400.2 37.991 229 140 2 455 682 1235 1462 1.74e-32 135
Msa0777680 AT1G30400.2 26.433 314 196 9 407 704 566 860 3.41e-24 109
Msa0777680 AT1G30400.1 37.991 229 140 2 455 682 1235 1462 1.74e-32 135
Msa0777680 AT1G30400.1 26.433 314 196 9 407 704 566 860 3.41e-24 109
Msa0777680 AT1G30410.1 34.375 288 175 7 402 678 1176 1460 1.93e-32 135
Msa0777680 AT1G30410.1 30.147 272 168 7 407 673 570 824 5.77e-23 105
Msa0777680 AT1G30410.2 34.375 288 175 7 402 678 1173 1457 2.05e-32 135
Msa0777680 AT1G30410.2 30.147 272 168 7 407 673 567 821 5.38e-23 105
Msa0777680 AT1G30410.6 34.375 288 175 7 402 678 1173 1457 2.05e-32 135
Msa0777680 AT1G30410.6 30.147 272 168 7 407 673 567 821 5.38e-23 105
Msa0777680 AT1G30410.4 34.375 288 175 7 402 678 1173 1457 2.05e-32 135
Msa0777680 AT1G30410.4 30.147 272 168 7 407 673 567 821 5.38e-23 105
Msa0777680 AT2G47800.1 33.205 259 170 3 432 688 1248 1505 2.18e-32 135
Msa0777680 AT2G47800.1 23.704 405 265 11 312 700 497 873 1.68e-20 97.8
Msa0777680 AT1G30410.5 34.375 288 175 7 402 678 1058 1342 2.32e-32 135
Msa0777680 AT1G30410.5 30.147 272 168 7 407 673 452 706 5.29e-23 105
Msa0777680 AT1G30420.1 36.555 238 146 4 445 678 1221 1457 2.69e-32 135
Msa0777680 AT1G30420.1 31.140 228 141 5 449 673 607 821 3.81e-23 106
Msa0777680 AT3G13080.1 31.707 246 162 4 445 688 1260 1501 1.22e-31 133
Msa0777680 AT3G13080.1 28.070 171 115 4 536 702 708 874 2.30e-13 74.7
Msa0777680 AT3G59140.1 31.050 219 149 2 455 672 1205 1422 1.80e-31 132
Msa0777680 AT3G59140.1 22.500 440 305 10 261 688 407 822 8.55e-20 95.5
Msa0777680 AT3G13090.1 31.707 246 162 4 445 688 1210 1451 4.55e-31 131
Msa0777680 AT3G13090.1 29.487 156 106 3 549 702 682 835 1.67e-15 81.6
Msa0777680 AT3G13080.5 33.036 224 145 3 445 667 1260 1479 4.95e-31 131
Msa0777680 AT3G13080.5 28.070 171 115 4 536 702 708 874 2.73e-13 74.3
Msa0777680 AT3G13100.2 31.301 246 163 4 445 688 987 1228 3.87e-30 128
Msa0777680 AT3G13100.2 27.575 301 195 8 407 701 329 612 8.48e-19 92.0
Msa0777680 AT3G13100.1 31.301 246 163 4 445 688 1232 1473 4.48e-30 128
Msa0777680 AT3G13100.1 27.575 301 195 8 407 701 574 857 9.08e-19 92.0
Msa0777680 AT1G67940.1 33.617 235 123 8 471 688 43 261 7.28e-29 116
Msa0777680 AT2G07680.4 30.314 287 190 6 402 681 1105 1388 1.39e-28 123
Msa0777680 AT2G07680.4 30.000 200 124 3 476 673 579 764 1.32e-15 81.6
Msa0777680 AT2G07680.3 30.314 287 190 6 402 681 1130 1413 1.42e-28 123
Msa0777680 AT2G07680.3 30.000 200 124 3 476 673 604 789 1.32e-15 81.6
Msa0777680 AT2G07680.1 30.314 287 190 6 402 681 1108 1391 1.52e-28 123
Msa0777680 AT2G07680.1 30.000 200 124 3 476 673 582 767 1.40e-15 81.6
Msa0777680 AT2G07680.6 30.314 287 190 6 402 681 1031 1314 1.54e-28 123
Msa0777680 AT2G07680.6 30.102 196 121 3 476 669 505 686 1.48e-15 81.6
Msa0777680 AT2G07680.5 30.314 287 190 6 402 681 1114 1397 1.65e-28 123
Msa0777680 AT2G07680.5 30.000 200 124 3 476 673 588 773 1.49e-15 81.6
Msa0777680 AT4G25450.2 37.349 166 99 3 439 600 453 617 1.38e-25 112
Msa0777680 AT3G13080.2 29.675 246 142 5 445 688 1260 1476 7.24e-24 108
Msa0777680 AT3G13080.2 28.070 171 115 4 536 702 708 874 2.45e-13 74.3
Msa0777680 AT1G30420.2 31.140 228 141 5 449 673 607 821 4.12e-23 105
Msa0777680 AT3G60160.2 26.464 427 290 7 277 699 455 861 4.53e-23 105
Msa0777680 AT3G60160.2 38.596 114 68 2 453 565 1251 1363 9.64e-17 85.5
Msa0777680 AT1G30410.3 30.147 272 168 7 407 673 567 821 5.55e-23 105
Msa0777680 AT1G30410.3 32.275 189 115 6 402 580 1173 1358 1.11e-16 85.1
Msa0777680 AT5G39040.2 23.706 367 265 7 196 554 136 495 5.55e-19 91.7
Msa0777680 AT1G31770.1 30.942 223 122 6 469 673 78 286 3.90e-17 86.3
Msa0777680 AT3G47780.1 26.852 216 145 6 475 686 636 842 4.51e-17 86.3
Msa0777680 AT3G47750.1 26.389 216 150 5 475 686 638 848 8.10e-17 85.5
Msa0777680 AT3G25620.2 28.821 229 144 8 470 690 97 314 8.65e-17 85.1
Msa0777680 AT4G25750.1 30.769 221 124 6 472 678 30 235 9.61e-17 84.7
Msa0777680 AT5G19410.2 27.823 248 159 7 472 705 75 316 9.70e-17 84.7
Msa0777680 AT5G19410.1 27.823 248 159 7 472 705 66 307 1.24e-16 84.3
Msa0777680 AT3G47760.1 26.457 223 153 6 469 686 591 807 1.58e-16 84.3
Msa0777680 AT3G25620.1 29.437 231 140 9 470 690 97 314 1.66e-16 83.2
Msa0777680 AT3G47760.3 26.457 223 153 6 469 686 631 847 1.71e-16 84.3
Msa0777680 AT3G47760.2 26.457 223 153 6 469 686 601 817 1.81e-16 84.3
Msa0777680 AT5G52860.1 33.333 213 118 7 472 673 44 243 2.11e-16 83.6
Msa0777680 AT3G47770.2 26.996 263 170 9 437 686 586 839 2.38e-16 84.0
Msa0777680 AT3G47770.1 26.996 263 170 9 437 686 560 813 3.08e-16 83.6
Msa0777680 AT5G61740.2 25.455 275 175 10 425 686 525 782 5.49e-16 82.8
Msa0777680 AT5G61740.1 25.455 275 175 10 425 686 559 816 5.81e-16 82.8
Msa0777680 AT5G61740.3 25.714 280 168 11 425 686 420 677 6.85e-16 82.4
Msa0777680 AT2G07680.2 30.000 200 124 3 476 673 604 789 1.11e-15 82.0
Msa0777680 AT5G06530.2 32.558 215 130 9 469 673 176 385 1.29e-15 81.3
Msa0777680 AT5G06530.1 32.558 215 130 9 469 673 176 385 1.29e-15 81.3
Msa0777680 AT5G06530.3 32.558 215 130 9 469 673 176 385 1.50e-15 81.3
Msa0777680 AT3G47740.1 25.676 222 150 7 470 686 628 839 1.91e-15 80.9
Msa0777680 AT3G47790.1 25.806 217 150 6 475 686 609 819 3.71e-15 80.1
Msa0777680 AT2G13610.1 28.972 214 135 8 470 673 60 266 2.48e-14 77.0
Msa0777680 AT4G27420.1 29.204 226 125 8 469 673 63 274 5.42e-14 75.9
Msa0777680 AT3G13220.1 30.660 212 135 7 470 673 104 311 7.53e-14 75.5
Msa0777680 AT1G65410.1 27.490 251 138 12 457 676 85 322 8.56e-14 73.9
Msa0777680 AT2G37360.1 29.864 221 137 9 465 673 126 340 9.05e-14 75.5
Msa0777680 AT3G13080.3 28.070 171 115 4 536 702 708 874 1.68e-13 74.7
Msa0777680 AT3G13080.4 28.070 171 115 4 536 702 708 874 1.68e-13 74.7
Msa0777680 AT1G53270.1 27.848 237 150 8 451 673 27 256 2.47e-13 73.9
Msa0777680 AT1G71960.1 29.767 215 137 8 469 673 80 290 2.82e-13 73.9
Msa0777680 AT1G71330.1 29.688 128 87 2 576 702 21 146 2.89e-13 72.0
Msa0777680 AT3G53510.1 29.412 221 134 9 467 673 121 333 6.70e-13 72.8
Msa0777680 AT1G51500.1 30.531 226 133 9 463 673 35 251 7.76e-13 72.4
Msa0777680 AT1G17840.1 28.169 213 140 6 470 673 67 275 8.23e-12 68.9
Msa0777680 AT3G55090.1 27.928 222 140 8 465 673 100 314 9.07e-12 68.9
Msa0777680 AT5G06530.4 31.282 195 119 9 489 673 1 190 2.17e-11 67.4
Msa0777680 AT2G39350.1 27.650 217 137 8 470 673 107 316 2.98e-11 67.4
Msa0777680 AT3G55130.1 28.372 215 139 7 470 673 97 307 3.24e-11 67.4
Msa0777680 AT2G41700.1 25.778 225 154 6 451 669 543 760 6.41e-11 66.6
Msa0777680 AT2G41700.2 25.778 225 154 6 451 669 473 690 7.32e-11 66.6
Msa0777680 AT3G55100.1 27.830 212 137 8 470 670 49 255 7.62e-11 65.9
Msa0777680 AT3G55100.2 27.830 212 137 8 470 670 49 255 7.62e-11 65.9
Msa0777680 AT1G53390.1 27.778 216 139 9 470 673 521 731 9.64e-11 65.9

Find 166 sgRNAs with CRISPR-Local

Find 738 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATGGATTGCTGCTTTC+CGG 0.169477 5_2:+56967393 None:intergenic
TAAATTCATACATAATTTAT+TGG 0.185031 5_2:-56965924 Msa0777680:three_prime_UTR
GGTAACTAATAAGGGATTTA+AGG 0.199103 5_2:+56976555 None:intergenic
AATATGCAGGTGATGGTAAA+TGG 0.199922 5_2:-56971678 Msa0777680:intron
TCATCCAAAGGTAACTAATA+AGG 0.229718 5_2:+56976546 None:intergenic
TTTATAGAGAAAATTGAAAT+TGG 0.231104 5_2:+56976728 None:intergenic
GAACCAATTACTTACTCTTT+AGG 0.235839 5_2:+56972252 None:intergenic
GCAATTTCAGATCATTGTTT+TGG 0.251898 5_2:-56966259 Msa0777680:intron
TAAAATGTACATTCTCAAAT+TGG 0.252189 5_2:+56969745 None:intergenic
GCAAAGCCTCTAAGGTTTAA+TGG 0.262886 5_2:-56969777 Msa0777680:CDS
TCTTTATGCTCCCACTTTGA+TGG 0.273508 5_2:+56966125 None:intergenic
CTGTCAGTTGCTGCATATAT+TGG 0.275745 5_2:-56972766 Msa0777680:CDS
ACTGTAACGGTAACCGCTTC+TGG 0.304299 5_2:+56976796 None:intergenic
ATGGCAGTGTTGATTGGATA+TGG 0.306041 5_2:-56974033 Msa0777680:CDS
GTCATGGATTGCTGCTTTCC+GGG 0.308116 5_2:+56967394 None:intergenic
GGTATTCTGGCCTACAAATA+TGG 0.309377 5_2:-56972814 Msa0777680:CDS
AAGAAAATGCAAAGCCTCTA+AGG 0.319198 5_2:-56969785 Msa0777680:CDS
AGTTTCACATTCTTTATCAT+TGG 0.321818 5_2:-56965982 Msa0777680:three_prime_UTR
GTCATTATCAGCCTTATTCA+TGG 0.325503 5_2:+56972479 None:intergenic
CAAAGCCTCTAAGGTTTAAT+GGG 0.325662 5_2:-56969776 Msa0777680:CDS
TTCAGTGGAGGACTAAATTC+AGG 0.326820 5_2:-56972506 Msa0777680:intron
ATCTATGGTATCAGGTATTC+TGG 0.331441 5_2:-56972827 Msa0777680:CDS
CATCCAAAGGTAACTAATAA+GGG 0.332237 5_2:+56976547 None:intergenic
AGGAAGATATGCACAGCTTT+GGG 0.333688 5_2:-56966184 Msa0777680:CDS
AATCCCTTATTAGTTACCTT+TGG 0.335581 5_2:-56976550 Msa0777680:CDS
GGATATGGGATTGCACGTTC+TGG 0.341254 5_2:-56974018 Msa0777680:CDS
CTGATAATGACGCTAGTACT+AGG 0.342140 5_2:-56972467 Msa0777680:CDS
ACTGAGGCATACCTCTAATA+TGG 0.351079 5_2:+56973030 None:intergenic
ATGTATCCCTTGAGAGTTTA+CGG 0.355828 5_2:-56967718 Msa0777680:CDS
CAGAATGACTGTTGGTGATT+TGG 0.356379 5_2:-56971946 Msa0777680:intron
TAATCTTGAATTTCAGCTTC+GGG 0.356883 5_2:-56976519 Msa0777680:intron
AGATAGATGATCAAGATATT+CGG 0.357328 5_2:-56967742 Msa0777680:CDS
TATTCAAGCTTGGAGTTGAT+TGG 0.357739 5_2:-56974128 Msa0777680:CDS
ATTCAGGAAAGCCATGAATA+AGG 0.357979 5_2:-56972490 Msa0777680:CDS
GTCAGTTGCAAGATCTCTTC+AGG 0.373756 5_2:-56966008 Msa0777680:three_prime_UTR
ACATGGCTTTCATGTCGATT+AGG 0.378610 5_2:+56971589 None:intergenic
ATCCAGATATCTATGGTATC+AGG 0.379838 5_2:-56972835 Msa0777680:intron
CTTGTTATTTAGAAGTGCTT+TGG 0.385533 5_2:+56965791 None:intergenic
GATAGATGATCAAGATATTC+GGG 0.387294 5_2:-56967741 Msa0777680:CDS
GTCCCTTTCTTATTCAAGCT+TGG 0.390085 5_2:-56974138 Msa0777680:CDS
TTGGACATGGTTTGAGTTGA+CGG 0.395260 5_2:+56976747 None:intergenic
CAGAATACTTACAGTATTGC+AGG 0.395874 5_2:+56966896 None:intergenic
TCTCTTCCACTCTATTTCCT+TGG 0.399272 5_2:-56971639 Msa0777680:CDS
ATAATCTTGAATTTCAGCTT+CGG 0.401531 5_2:-56976520 Msa0777680:CDS
AAACGAAGCTCTACTATTTG+AGG 0.405288 5_2:+56976670 None:intergenic
CTTCCACTCTATTTCCTTGG+TGG 0.407177 5_2:-56971636 Msa0777680:CDS
ACAGAAAGAAAGATACTAGA+TGG 0.408317 5_2:-56968718 Msa0777680:CDS
CATATCGATCCAGATATCTA+TGG 0.408701 5_2:-56972842 Msa0777680:intron
CAGGAAGATATGCACAGCTT+TGG 0.409037 5_2:-56966185 Msa0777680:CDS
TTGACCTTCGATATCATCTA+AGG 0.409081 5_2:-56973412 Msa0777680:intron
CATAGTACCTACCATATTAG+AGG 0.409705 5_2:-56973041 Msa0777680:intron
CATTTCTTACACTTCCAGAA+TGG 0.414448 5_2:+56968079 None:intergenic
TGATTCACTTATTAATTATG+AGG 0.415165 5_2:-56972439 Msa0777680:intron
GTTTCACATTCTTTATCATT+GGG 0.416978 5_2:-56965981 Msa0777680:three_prime_UTR
GAGAGTTTACGGAAGTCTAT+TGG 0.418543 5_2:-56967707 Msa0777680:CDS
ATTTCTTACACTTCCAGAAT+GGG 0.419330 5_2:+56968080 None:intergenic
TTCCTTGCTCTTCAAGAAAG+AGG 0.421148 5_2:-56966088 Msa0777680:three_prime_UTR
TACGCCGTTCCCACCACTTC+CGG 0.426178 5_2:-56976884 Msa0777680:CDS
AAATGATTGCCGCTGCTTCA+AGG 0.426756 5_2:-56976907 Msa0777680:CDS
ATATTTCATAACATTCACTA+TGG 0.428886 5_2:-56967558 Msa0777680:CDS
GAGCCTGTGAGCAATGAAAA+TGG 0.429900 5_2:+56966622 None:intergenic
GGTAAAAGTGTTGCAATTGT+TGG 0.434197 5_2:-56968673 Msa0777680:CDS
AATAGAGTGGAAGAGATAGT+TGG 0.442703 5_2:+56971646 None:intergenic
GGACAATTCGTTTAGTTTCA+AGG 0.447929 5_2:-56973661 Msa0777680:CDS
AGTCTTGCTTTGTTGAACTT+TGG 0.448486 5_2:-56972038 Msa0777680:CDS
ACTCCAAGCTTGAATAAGAA+AGG 0.455100 5_2:+56974135 None:intergenic
TCTGGAGCTTCTGCTTTCAA+TGG 0.464823 5_2:-56974000 Msa0777680:intron
CCGGCAGTGGCAATCGTGTC+CGG 0.467385 5_2:-56976865 Msa0777680:CDS
CAATATATGCAGCAACTGAC+AGG 0.468437 5_2:+56972767 None:intergenic
ATATGCAGGTGATGGTAAAT+GGG 0.470801 5_2:-56971677 Msa0777680:intron
CATAATTTATTGGTGTTCAA+AGG 0.474740 5_2:-56965914 Msa0777680:three_prime_UTR
TTCATAACATTCACTATGGC+CGG 0.475062 5_2:-56967554 Msa0777680:CDS
TGAGTGGCCTGTGGTGATAC+AGG 0.476342 5_2:+56976826 None:intergenic
TATCCAATCAACACTGCCAT+GGG 0.493620 5_2:+56974036 None:intergenic
CAAGATTATCTTTCATCCAA+AGG 0.496040 5_2:+56976534 None:intergenic
ATTGCCACTGCCGGAAGTGG+TGG 0.497645 5_2:+56976874 None:intergenic
ACGATTGCCACTGCCGGAAG+TGG 0.501249 5_2:+56976871 None:intergenic
GTTCCCACCACTTCCGGCAG+TGG 0.502483 5_2:-56976878 Msa0777680:CDS
GTAAAAGTGTTGCAATTGTT+GGG 0.502684 5_2:-56968672 Msa0777680:CDS
TGTTCTCATGGGATCATGAA+TGG 0.505984 5_2:-56971969 Msa0777680:CDS
CGAACAATTGATCGTGGTAG+CGG 0.506493 5_2:-56973100 Msa0777680:CDS
TACTGCTCTTTCAACAGCAA+TGG 0.507400 5_2:-56971997 Msa0777680:CDS
AAAAGGTGCTCCATATTTGT+AGG 0.511489 5_2:+56972804 None:intergenic
TGGCAGTGTTGATTGGATAT+GGG 0.515347 5_2:-56974032 Msa0777680:CDS
CCTCTTCTGTTGCGGAAAGC+CGG 0.519867 5_2:+56967535 None:intergenic
TGCTTCGAATCCTACTATGA+TGG 0.521863 5_2:-56974073 Msa0777680:CDS
TTCCTCTTTCTTGAAGAGCA+AGG 0.523375 5_2:+56966086 None:intergenic
GTTGCAATTGTTGGGACTAG+TGG 0.533303 5_2:-56968664 Msa0777680:CDS
CCGGACACGATTGCCACTGC+CGG 0.534664 5_2:+56976865 None:intergenic
TGATAATGACGCTAGTACTA+GGG 0.535198 5_2:-56972466 Msa0777680:CDS
AGGGAAGTAATCCACGCAAA+AGG 0.535230 5_2:+56972787 None:intergenic
TGTTTACTTACAGTATCTTG+TGG 0.535732 5_2:+56967677 None:intergenic
ATCTGAATAGCATTCTGAGA+AGG 0.535884 5_2:+56968112 None:intergenic
TGTGGGAGAACGAGGGCTAA+AGG 0.544014 5_2:-56967336 Msa0777680:intron
TCTGAATAGCATTCTGAGAA+GGG 0.544820 5_2:+56968113 None:intergenic
CCGGCTTTCCGCAACAGAAG+AGG 0.545355 5_2:-56967535 Msa0777680:CDS
TAGACTTCCGTAAACTCTCA+AGG 0.546719 5_2:+56967711 None:intergenic
TCCACTGTTGTGGGAGAACG+AGG 0.546737 5_2:-56967344 Msa0777680:CDS
GAAGTTGAGTCGTCTTTCCG+TGG 0.546866 5_2:-56965869 Msa0777680:three_prime_UTR
CTCCAAGCTTGAATAAGAAA+GGG 0.548586 5_2:+56974136 None:intergenic
ATATCACTAGTTGTGCCAGC+TGG 0.564123 5_2:-56968694 Msa0777680:CDS
AGCCATGTTTCAGTTACTTG+AGG 0.564217 5_2:-56971574 Msa0777680:intron
ACTGCCGGAAGTGGTGGGAA+CGG 0.564652 5_2:+56976880 None:intergenic
GAGAAAATTGAAATTGGACA+TGG 0.565089 5_2:+56976734 None:intergenic
GATTGGTTGAATACTGCCAC+GGG 0.569944 5_2:-56974111 Msa0777680:CDS
AATTCGTTTAGTTTCAAGGA+AGG 0.573258 5_2:-56973657 Msa0777680:intron
CACTCAATTCCCACCAGAAG+CGG 0.573528 5_2:-56976809 Msa0777680:CDS
TACAGGTCTATGAAGCCGCC+CGG 0.575555 5_2:-56967412 Msa0777680:intron
GAAGTGCTCTTAGCAAATGC+AGG 0.576844 5_2:-56966204 Msa0777680:CDS
AGGAAGCAGTTAAAAGCGAC+CGG 0.579293 5_2:+56976846 None:intergenic
TTCTGTTACCGTGACTGTAA+CGG 0.581229 5_2:+56976783 None:intergenic
TTGCCACTGCCGGAAGTGGT+GGG 0.585352 5_2:+56976875 None:intergenic
ACCATCACTAAATCACCTCC+AGG 0.586523 5_2:-56976605 Msa0777680:CDS
ATACAAAATCTTGCTGTCCA+CGG 0.587784 5_2:+56965852 None:intergenic
AGGTACCTCCTCTTCTGTTG+CGG 0.587904 5_2:+56967527 None:intergenic
GCAAAATAAGCAATATACAC+TGG 0.590106 5_2:+56965735 None:intergenic
ACTGCTTCCTGTATCACCAC+AGG 0.594273 5_2:-56976833 Msa0777680:CDS
TGATTGGTTGAATACTGCCA+CGG 0.594998 5_2:-56974112 Msa0777680:CDS
AGACTTCCGTAAACTCTCAA+GGG 0.595043 5_2:+56967712 None:intergenic
ATATCCAATCAACACTGCCA+TGG 0.596395 5_2:+56974035 None:intergenic
TTTCTTACACTTCCAGAATG+GGG 0.596447 5_2:+56968081 None:intergenic
AGTCTAGCACTCAATATACA+AGG 0.598470 5_2:+56965760 None:intergenic
TCAGCAATTTGACCACCACC+TGG 0.600283 5_2:+56976587 None:intergenic
ACTAAATCACCTCCAGGTGG+TGG 0.601225 5_2:-56976599 Msa0777680:CDS
GGAAGATATGCACAGCTTTG+GGG 0.602281 5_2:-56966183 Msa0777680:CDS
CTAGTATCTTTCTTTCTGTG+AGG 0.603754 5_2:+56968722 None:intergenic
GAAAACTCGTGATAGTGTCA+TGG 0.607580 5_2:+56967378 None:intergenic
AGCGGTTACCGTTACAGTCA+CGG 0.609028 5_2:-56976791 Msa0777680:CDS
GTAACGGTAACCGCTTCTGG+TGG 0.618800 5_2:+56976799 None:intergenic
CGCTTCTGGTGGGAATTGAG+TGG 0.619297 5_2:+56976810 None:intergenic
ATTGTTGGGACTAGTGGAAG+TGG 0.622893 5_2:-56968658 Msa0777680:intron
AGGCATACCTCTAATATGGT+AGG 0.623046 5_2:+56973034 None:intergenic
TAACGGTAACCGCTTCTGGT+GGG 0.623777 5_2:+56976800 None:intergenic
AATGGAAAGATGGTTGAGCA+TGG 0.626094 5_2:-56966234 Msa0777680:CDS
CCCTCGTTCTCCCACAACAG+TGG 0.627489 5_2:+56967343 None:intergenic
TTAGATGATATCGAAGGTCA+AGG 0.630784 5_2:+56973414 None:intergenic
ATTGATACAGCCATCAAAGT+GGG 0.631411 5_2:-56966135 Msa0777680:CDS
ACCTGGAGGTGATTTAGTGA+TGG 0.632148 5_2:+56976604 None:intergenic
AACGGCGTACCTTGAAGCAG+CGG 0.638230 5_2:+56976898 None:intergenic
AAGAGCAGTACTAAATATAG+CGG 0.639907 5_2:+56972010 None:intergenic
GACACTGTATCACGAAACAA+TGG 0.644863 5_2:+56966028 None:intergenic
AAAGCCTCTAAGGTTTAATG+GGG 0.645999 5_2:-56969775 Msa0777680:CDS
CTCATCACACTGCATTGCAG+TGG 0.646215 5_2:+56966598 None:intergenic
AACTGATTGTGGCAGAACTG+CGG 0.647147 5_2:-56973712 Msa0777680:intron
ACACCACCAAGGAAATAGAG+TGG 0.647574 5_2:+56971633 None:intergenic
AATATATGCAGCAACTGACA+GGG 0.647725 5_2:+56972768 None:intergenic
TACCTCAAGTAACTGAAACA+TGG 0.647937 5_2:+56971572 None:intergenic
TCCAATCAACACTGCCATGG+GGG 0.650176 5_2:+56974038 None:intergenic
GGTGGGAATTGAGTGGCCTG+TGG 0.652594 5_2:+56976817 None:intergenic
ATGAATGGCAGAATGACTGT+TGG 0.653422 5_2:-56971954 Msa0777680:CDS
GCTTTCCGCAACAGAAGAGG+AGG 0.661756 5_2:-56967532 Msa0777680:intron
TTTGCTAAGAGCACTTCATG+TGG 0.665476 5_2:+56966210 None:intergenic
ATTAGAATCACTTCTTTACG+AGG 0.665784 5_2:+56965636 None:intergenic
CACTGCAATGCAGTGTGATG+AGG 0.671303 5_2:-56966597 Msa0777680:intron
ATCCAATCAACACTGCCATG+GGG 0.677898 5_2:+56974037 None:intergenic
CATACCTTAGATGATATCGA+AGG 0.682222 5_2:+56973408 None:intergenic
CCACTGTTGTGGGAGAACGA+GGG 0.687524 5_2:-56967343 Msa0777680:CDS
TTAAGTCGAACAATTGATCG+TGG 0.689325 5_2:-56973106 Msa0777680:CDS
AATTGATACAGCCATCAAAG+TGG 0.690779 5_2:-56966136 Msa0777680:CDS
TACTATGTTGAACAACGTAG+AGG 0.691074 5_2:+56973057 None:intergenic
ATGGATTGCTGCTTTCCGGG+CGG 0.692123 5_2:+56967397 None:intergenic
AACAACACTAGCATTGCCCG+TGG 0.713368 5_2:+56974095 None:intergenic
GCAATTTGACCACCACCTGG+AGG 0.730091 5_2:+56976590 None:intergenic
AAGCCTCTAAGGTTTAATGG+GGG 0.730399 5_2:-56969774 Msa0777680:CDS
ATCACTAAATCACCTCCAGG+TGG 0.737032 5_2:-56976602 Msa0777680:CDS
TTGCACGATAAACACCACCA+AGG 0.767423 5_2:+56971622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTATATTTTTTA+TGG - chr5_2:56966246-56966265 Msa0777680:CDS 0.0%
!!! TTATTTTTTATATTTTTTAT+GGG - chr5_2:56966247-56966266 Msa0777680:CDS 0.0%
!! ATTAGAAAATATTATATACT+CGG + chr5_2:56972342-56972361 None:intergenic 10.0%
!!! TTTAATTTTAAGATTGTTAT+GGG - chr5_2:56972733-56972752 Msa0777680:intron 10.0%
!! AAATTCTAATGAAAAATAAA+GGG + chr5_2:56973873-56973892 None:intergenic 10.0%
!! AAAATTCTAATGAAAAATAA+AGG + chr5_2:56973874-56973893 None:intergenic 10.0%
!! TAAATTCATACATAATTTAT+TGG - chr5_2:56976401-56976420 Msa0777680:intron 10.0%
!! TTTATAGAGAAAATTGAAAT+TGG + chr5_2:56965600-56965619 None:intergenic 15.0%
!! TTAGAATATTGTTAGTATAA+AGG + chr5_2:56966343-56966362 None:intergenic 15.0%
!! AACAAGGATATTAAAAAATT+TGG - chr5_2:56966686-56966705 Msa0777680:CDS 15.0%
!! TAATTATATATGTAACAAAC+TGG - chr5_2:56967648-56967667 Msa0777680:intron 15.0%
!!! ATTTTCTATTTTTCCTTTTT+TGG - chr5_2:56967720-56967739 Msa0777680:CDS 15.0%
!!! TTTTCTATTTTTCCTTTTTT+GGG - chr5_2:56967721-56967740 Msa0777680:CDS 15.0%
!!! TTTAGAGTAAATATACAATT+TGG + chr5_2:56967885-56967904 None:intergenic 15.0%
!! AATGGTATTTATAAATGAAA+TGG - chr5_2:56968343-56968362 Msa0777680:intron 15.0%
!! GACTAAAAAAAAAAAAAACT+AGG + chr5_2:56969185-56969204 None:intergenic 15.0%
!! ACAAATACATTAAATCAAAA+AGG + chr5_2:56970546-56970565 None:intergenic 15.0%
!!! TAACTTTTTAAAGTTTAATG+TGG + chr5_2:56970783-56970802 None:intergenic 15.0%
!!! GAATTTTGAAATAATTAGTT+TGG - chr5_2:56970965-56970984 Msa0777680:intron 15.0%
!! TTTCATATCATTTCAAAATT+TGG - chr5_2:56971627-56971646 Msa0777680:CDS 15.0%
!! ATTGAATTATTTAACTGAAT+TGG - chr5_2:56971994-56972013 Msa0777680:CDS 15.0%
!! ATATATTGAACATATAAACT+TGG + chr5_2:56972031-56972050 None:intergenic 15.0%
!! TGTTCAATATATTAATTAGT+TGG - chr5_2:56972039-56972058 Msa0777680:CDS 15.0%
!!! GTTTAATTTTAAGATTGTTA+TGG - chr5_2:56972732-56972751 Msa0777680:intron 15.0%
!! AGTAATTCTTATTGAAATTA+TGG + chr5_2:56972951-56972970 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr5_2:56973066-56973085 None:intergenic 15.0%
!! AAAGTAGAATATATTGTATT+GGG + chr5_2:56973106-56973125 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + chr5_2:56973130-56973149 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + chr5_2:56973131-56973150 None:intergenic 15.0%
!! AGTACATAAATATAAATACA+AGG + chr5_2:56973270-56973289 None:intergenic 15.0%
!! ACAGTTATATTTGTATTATA+AGG + chr5_2:56973416-56973435 None:intergenic 15.0%
!!! TTTTCATTAGAATTTTTTTG+AGG - chr5_2:56973878-56973897 Msa0777680:intron 15.0%
!!! ATTAATTATTTTATGCTTAC+AGG - chr5_2:56974896-56974915 Msa0777680:intron 15.0%
!!! CAAAAGATTTTTTTTTTGTT+TGG - chr5_2:56976044-56976063 Msa0777680:intron 15.0%
!!! TTTTTGTTTATATTTGAGAC+CGG + chr5_2:56966069-56966088 None:intergenic 20.0%
!! AAAGTAGTAAATATCCAATT+TGG - chr5_2:56966285-56966304 Msa0777680:intron 20.0%
!! ATTTGAATATCCAACAATAT+TGG + chr5_2:56967263-56967282 None:intergenic 20.0%
!!! TCAAGTTATTGTATTTTGAT+TGG - chr5_2:56967322-56967341 Msa0777680:intron 20.0%
!! ATTCTCTCTTGTATATAAAT+TGG - chr5_2:56967746-56967765 Msa0777680:CDS 20.0%
!!! CTGATATGTAAAAGTATTTT+CGG - chr5_2:56968718-56968737 Msa0777680:CDS 20.0%
!! ATTCTGTGATTATGAAAAAT+AGG + chr5_2:56968816-56968835 None:intergenic 20.0%
!! ACGAAATACTGAAAAAAAAA+AGG - chr5_2:56969050-56969069 Msa0777680:intron 20.0%
!! TGATTCACTTATTAATTATG+AGG - chr5_2:56969886-56969905 Msa0777680:intron 20.0%
!!! TTCTTTTATTGTATTACAGA+CGG - chr5_2:56970001-56970020 Msa0777680:intron 20.0%
!!! TAGCAACTTTTAAAAAATCT+TGG - chr5_2:56970121-56970140 Msa0777680:intron 20.0%
!!! AGATTTCTTAAGCTTTATTT+AGG + chr5_2:56970201-56970220 None:intergenic 20.0%
!!! AAATAATTAGTTTGGATTAG+AGG - chr5_2:56970973-56970992 Msa0777680:intron 20.0%
!!! AATAATTAGTTTGGATTAGA+GGG - chr5_2:56970974-56970993 Msa0777680:intron 20.0%
!! AGGTTGTAATATATATTCAT+AGG - chr5_2:56970999-56971018 Msa0777680:intron 20.0%
!! TTGTAATATATATTCATAGG+AGG - chr5_2:56971002-56971021 Msa0777680:intron 20.0%
!!! TAATAGATTTGTTTGATCTA+TGG - chr5_2:56971599-56971618 Msa0777680:CDS 20.0%
!! TATCATTTCAAAATTTGGAA+TGG - chr5_2:56971632-56971651 Msa0777680:CDS 20.0%
!!! ATCATTTCAAAATTTGGAAT+GGG - chr5_2:56971633-56971652 Msa0777680:CDS 20.0%
!!! CTCATTTTTTAGATTGAATT+TGG + chr5_2:56971902-56971921 None:intergenic 20.0%
!! TCTAAAAAATGAGTGTATTA+AGG - chr5_2:56971909-56971928 Msa0777680:intron 20.0%
!!! ATATTATTCACTGTTATTTC+TGG - chr5_2:56972179-56972198 Msa0777680:intron 20.0%
!! TCTTTGTATAATTCTAACAT+AGG + chr5_2:56972211-56972230 None:intergenic 20.0%
!!! TTACAATTTTCCTCAAATTT+TGG - chr5_2:56972389-56972408 Msa0777680:intron 20.0%
!! TAAAATGTACATTCTCAAAT+TGG + chr5_2:56972583-56972602 None:intergenic 20.0%
!!! AATTTGAGAATGTACATTTT+AGG - chr5_2:56972582-56972601 Msa0777680:intron 20.0%
!!! GTTTGATTTGCTTAAAAATT+TGG - chr5_2:56972678-56972697 Msa0777680:intron 20.0%
!! AAAAATTTGGTACTTGAAAA+AGG - chr5_2:56972691-56972710 Msa0777680:intron 20.0%
!!! TTTTAAGTAGTGTTTACATT+GGG + chr5_2:56972830-56972849 None:intergenic 20.0%
!!! ATTTTAAGTAGTGTTTACAT+TGG + chr5_2:56972831-56972850 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr5_2:56972996-56973015 None:intergenic 20.0%
!! GAAAGTAGAATATATTGTAT+TGG + chr5_2:56973107-56973126 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + chr5_2:56973129-56973148 None:intergenic 20.0%
!! GAATTGAGTTTATGTAATTA+CGG - chr5_2:56973220-56973239 Msa0777680:intron 20.0%
!!! TTCTAAAACATGAAATGTAT+CGG - chr5_2:56974076-56974095 Msa0777680:CDS 20.0%
!!! TTTTATACATCTGTACTATA+TGG - chr5_2:56974355-56974374 Msa0777680:intron 20.0%
!! ATATTTCATAACATTCACTA+TGG - chr5_2:56974767-56974786 Msa0777680:intron 20.0%
!!! TACCATATATGCAATTTTAT+TGG - chr5_2:56975044-56975063 Msa0777680:intron 20.0%
!!! CATTGATAGCTAAATTTTAA+GGG + chr5_2:56975140-56975159 None:intergenic 20.0%
!! TTATTTACAGTATTGCATTA+GGG + chr5_2:56975302-56975321 None:intergenic 20.0%
!! TTTATTTACAGTATTGCATT+AGG + chr5_2:56975303-56975322 None:intergenic 20.0%
!! TATTCTGATCATATATATTC+TGG - chr5_2:56975445-56975464 Msa0777680:intron 20.0%
!! ATTCTGATCATATATATTCT+GGG - chr5_2:56975446-56975465 Msa0777680:intron 20.0%
!!! ATCACATCAATTTTCTATAA+AGG - chr5_2:56976369-56976388 Msa0777680:intron 20.0%
!!! TTTTTTACATTATTGTAGAG+TGG - chr5_2:56976620-56976639 Msa0777680:CDS 20.0%
! ATAATCTTGAATTTCAGCTT+CGG - chr5_2:56965805-56965824 Msa0777680:three_prime_UTR 25.0%
! TATATAGCAATCACAGATTA+GGG + chr5_2:56965893-56965912 None:intergenic 25.0%
! ATATATAGCAATCACAGATT+AGG + chr5_2:56965894-56965913 None:intergenic 25.0%
!!! ACTTTTCACTTTTTAGAAAG+TGG + chr5_2:56965950-56965969 None:intergenic 25.0%
!! TAGTAACTTTTAAATGGTCA+TGG + chr5_2:56966044-56966063 None:intergenic 25.0%
!! GTAATTAATCTTTTCACCAA+AGG + chr5_2:56966169-56966188 None:intergenic 25.0%
! TATAATTTCAGAGACCAAAT+TGG + chr5_2:56966302-56966321 None:intergenic 25.0%
!!! AATTTGGTCTCTGAAATTAT+AGG - chr5_2:56966301-56966320 Msa0777680:intron 25.0%
! TCCTTATAAATACCAATAGA+CGG + chr5_2:56966404-56966423 None:intergenic 25.0%
! GGATTATAATGACATTATGT+TGG - chr5_2:56966421-56966440 Msa0777680:intron 25.0%
! AGTTACAAAAAGACATTGTA+TGG - chr5_2:56966626-56966645 Msa0777680:CDS 25.0%
!!! GTCTGTTTTGTTATTTTCTT+GGG - chr5_2:56966880-56966899 Msa0777680:intron 25.0%
! CTAACAGAATACGAAATATA+TGG + chr5_2:56967121-56967140 None:intergenic 25.0%
! GGATCTTTACGTATATTAAA+AGG - chr5_2:56967197-56967216 Msa0777680:intron 25.0%
!!! AGTTATTGTATTTTGATTGG+AGG - chr5_2:56967325-56967344 Msa0777680:intron 25.0%
! TATCAAACATAAGTTCCATA+GGG + chr5_2:56967452-56967471 None:intergenic 25.0%
! TTATCAAACATAAGTTCCAT+AGG + chr5_2:56967453-56967472 None:intergenic 25.0%
! GTTACATATATAATTACCTG+AGG + chr5_2:56967644-56967663 None:intergenic 25.0%
!!! ATTTTGGAAAATTGATAACG+TGG - chr5_2:56967822-56967841 Msa0777680:intron 25.0%
! TGTTCAAAAGAGCTTATAAA+AGG + chr5_2:56967969-56967988 None:intergenic 25.0%
! AATATGTGCTTATCTTATCA+TGG + chr5_2:56968010-56968029 None:intergenic 25.0%
! AACTATTTAACATTCTGTTG+TGG - chr5_2:56968069-56968088 Msa0777680:intron 25.0%
!!! AAAAGCATCTACATCAATAT+TGG + chr5_2:56968528-56968547 None:intergenic 25.0%
! TTAAATGATTCAACTGATTG+TGG - chr5_2:56968602-56968621 Msa0777680:intron 25.0%
!! TTTTATTATGTGAACAGTTC+TGG - chr5_2:56968779-56968798 Msa0777680:intron 25.0%
! TTTCATAATCACAGAATAGT+TGG - chr5_2:56968819-56968838 Msa0777680:intron 25.0%
! CAAGAAAACTAAGAAAAGAA+AGG - chr5_2:56969007-56969026 Msa0777680:intron 25.0%
! AAAAAAAAAAACTAGGTGAG+AGG + chr5_2:56969178-56969197 None:intergenic 25.0%
!!! TTTTTTTTTAGTCGAGAAAC+TGG - chr5_2:56969192-56969211 Msa0777680:intron 25.0%
! TCTAAACATGAAAATGTGTT+TGG - chr5_2:56969623-56969642 Msa0777680:intron 25.0%
! AAAAGTCAAATGAAGTACAA+AGG + chr5_2:56969703-56969722 None:intergenic 25.0%
! GCATAAATCAATTAAAGTGT+TGG + chr5_2:56969933-56969952 None:intergenic 25.0%
!!! TGCTGTTTTTATCTTCAATT+TGG - chr5_2:56969950-56969969 Msa0777680:intron 25.0%
! ACAAAATTCACAAAAATCAC+CGG + chr5_2:56970515-56970534 None:intergenic 25.0%
! CAGGTCATGATTATTAAATA+TGG + chr5_2:56970611-56970630 None:intergenic 25.0%
! CATATTTAATAATCATGACC+TGG - chr5_2:56970609-56970628 Msa0777680:intron 25.0%
! ATTGAGTTAGATTATAATCC+AGG + chr5_2:56970630-56970649 None:intergenic 25.0%
! TATAATCTAACTCAATATGC+AGG - chr5_2:56970634-56970653 Msa0777680:intron 25.0%
!!! CTTTTTAAAGTTTAATGTGG+AGG + chr5_2:56970780-56970799 None:intergenic 25.0%
! ATTCTAAATGTGTATGCTTA+TGG - chr5_2:56970814-56970833 Msa0777680:intron 25.0%
! AAATCGAGTAGCAAATAATT+GGG + chr5_2:56970933-56970952 None:intergenic 25.0%
! AAAATCGAGTAGCAAATAAT+TGG + chr5_2:56970934-56970953 None:intergenic 25.0%
!!! TACTCGATTTTTTCGTTAAT+CGG - chr5_2:56970943-56970962 Msa0777680:intron 25.0%
! AATATATATTCATAGGAGGA+AGG - chr5_2:56971006-56971025 Msa0777680:intron 25.0%
! ATATATATTCATAGGAGGAA+GGG - chr5_2:56971007-56971026 Msa0777680:intron 25.0%
!!! TTTGTTTTTGTGGTTGAATT+AGG + chr5_2:56971370-56971389 None:intergenic 25.0%
! GATCAAACAAATCTATTAGT+GGG + chr5_2:56971597-56971616 None:intergenic 25.0%
! AGATCAAACAAATCTATTAG+TGG + chr5_2:56971598-56971617 None:intergenic 25.0%
!!! ACATATTTTAGGATGCTTTT+GGG + chr5_2:56971667-56971686 None:intergenic 25.0%
! TGGTCATATATACTTTAATG+TGG - chr5_2:56971718-56971737 Msa0777680:intron 25.0%
! GGTCATATATACTTTAATGT+GGG - chr5_2:56971719-56971738 Msa0777680:intron 25.0%
!! GAAAATCCCTTTTTATCAAT+AGG - chr5_2:56971958-56971977 Msa0777680:CDS 25.0%
! ATTCTGCCTATTGATAAAAA+GGG + chr5_2:56971967-56971986 None:intergenic 25.0%
! TATTCTGCCTATTGATAAAA+AGG + chr5_2:56971968-56971987 None:intergenic 25.0%
! CATATAAACTTGGAAGAAAA+AGG + chr5_2:56972021-56972040 None:intergenic 25.0%
! GCATTTATTCGAATAAATGA+AGG + chr5_2:56972415-56972434 None:intergenic 25.0%
! AAGATTGCGAATTAAGAATT+TGG + chr5_2:56972895-56972914 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr5_2:56972997-56973016 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + chr5_2:56973018-56973037 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + chr5_2:56973019-56973038 None:intergenic 25.0%
! CAAAGTAGGTCAATTAAATT+GGG - chr5_2:56973166-56973185 Msa0777680:intron 25.0%
! TACTCTATATAATATTCGCT+AGG - chr5_2:56973286-56973305 Msa0777680:intron 25.0%
! AATAGACATGTTGAATTAAC+AGG - chr5_2:56973375-56973394 Msa0777680:intron 25.0%
! AATTCATTTCCTAATAGACA+TGG - chr5_2:56973466-56973485 Msa0777680:intron 25.0%
! TACAAATTTCCATGTCTATT+AGG + chr5_2:56973478-56973497 None:intergenic 25.0%
! GCAAGTAAGAAATTTCATAA+TGG + chr5_2:56973702-56973721 None:intergenic 25.0%
! TTAGTGATATAGTGCTAAAA+GGG + chr5_2:56973797-56973816 None:intergenic 25.0%
! ATTAGTGATATAGTGCTAAA+AGG + chr5_2:56973798-56973817 None:intergenic 25.0%
!! ATTATTGTTTCACCTTTTCT+TGG - chr5_2:56973906-56973925 Msa0777680:intron 25.0%
!! AATGTATCGGTATTCAAATT+TGG - chr5_2:56974089-56974108 Msa0777680:CDS 25.0%
! TCATATTCATACATATTGAC+AGG - chr5_2:56974181-56974200 Msa0777680:intron 25.0%
! ATCAAATGTCATATATAGCA+TGG + chr5_2:56974301-56974320 None:intergenic 25.0%
!! TAGAGTGTCTTAAATCATTA+TGG - chr5_2:56974415-56974434 Msa0777680:intron 25.0%
!!! TGAATGACTAGTTTAAAGAT+TGG - chr5_2:56974487-56974506 Msa0777680:intron 25.0%
!! GTAGTTGCCTTTTATATTTA+AGG - chr5_2:56974509-56974528 Msa0777680:intron 25.0%
!!! AAGAGCACCTTAAATATAAA+AGG + chr5_2:56974519-56974538 None:intergenic 25.0%
! AGATAGATGATCAAGATATT+CGG - chr5_2:56974583-56974602 Msa0777680:intron 25.0%
! CTTTACAAATTTCCTTTGTT+AGG - chr5_2:56974853-56974872 Msa0777680:intron 25.0%
! TTAATAAGCTAAGAACATGT+TGG + chr5_2:56974881-56974900 None:intergenic 25.0%
! TGCCAATAAAATTGCATATA+TGG + chr5_2:56975049-56975068 None:intergenic 25.0%
!!! CCATTGATAGCTAAATTTTA+AGG + chr5_2:56975141-56975160 None:intergenic 25.0%
! CCTTAAAATTTAGCTATCAA+TGG - chr5_2:56975138-56975157 Msa0777680:intron 25.0%
! AATTTAGCTATCAATGGATA+AGG - chr5_2:56975144-56975163 Msa0777680:intron 25.0%
!!! TGCTTTTTTTAACAGTTAAG+TGG - chr5_2:56975360-56975379 Msa0777680:intron 25.0%
!!! TTTTTTTAACAGTTAAGTGG+TGG - chr5_2:56975363-56975382 Msa0777680:intron 25.0%
! TTCTGATCATATATATTCTG+GGG - chr5_2:56975447-56975466 Msa0777680:intron 25.0%
!! ACACACTTCTAATCTAAAAT+AGG + chr5_2:56975494-56975513 None:intergenic 25.0%
! ACAAAATTGAGAACTGTTAA+AGG + chr5_2:56975780-56975799 None:intergenic 25.0%
! GTAAATAAACAGCTAAATAC+TGG + chr5_2:56975813-56975832 None:intergenic 25.0%
! TCGATTAGTAATCTATATGT+TGG - chr5_2:56975910-56975929 Msa0777680:intron 25.0%
! AGTTTCACATTCTTTATCAT+TGG - chr5_2:56976343-56976362 Msa0777680:intron 25.0%
! GTTTCACATTCTTTATCATT+GGG - chr5_2:56976344-56976363 Msa0777680:intron 25.0%
!! CATAATTTATTGGTGTTCAA+AGG - chr5_2:56976411-56976430 Msa0777680:intron 25.0%
GAGAAAATTGAAATTGGACA+TGG + chr5_2:56965594-56965613 None:intergenic 30.0%
! TGATGATGATGATGATGAAT+TGG + chr5_2:56965634-56965653 None:intergenic 30.0%
GGTAACTAATAAGGGATTTA+AGG + chr5_2:56965773-56965792 None:intergenic 30.0%
AATCCCTTATTAGTTACCTT+TGG - chr5_2:56965775-56965794 Msa0777680:three_prime_UTR 30.0%
CATCCAAAGGTAACTAATAA+GGG + chr5_2:56965781-56965800 None:intergenic 30.0%
TCATCCAAAGGTAACTAATA+AGG + chr5_2:56965782-56965801 None:intergenic 30.0%
CAAGATTATCTTTCATCCAA+AGG + chr5_2:56965794-56965813 None:intergenic 30.0%
TAATCTTGAATTTCAGCTTC+GGG - chr5_2:56965806-56965825 Msa0777680:three_prime_UTR 30.0%
!!! TTTTTTACTTGTTGGAGCTA+AGG - chr5_2:56965842-56965861 Msa0777680:three_prime_UTR 30.0%
! AAGTTTCTTACATTTGAGAC+CGG + chr5_2:56965966-56965985 None:intergenic 30.0%
! AAGTTTCTTACATTTGAGAC+CGG - chr5_2:56965966-56965985 Msa0777680:three_prime_UTR 30.0%
CCATTTAAAAGTTACTACTC+CGG - chr5_2:56966047-56966066 Msa0777680:three_prime_UTR 30.0%
GTTAGTATAAAGGACTAGAT+CGG + chr5_2:56966333-56966352 None:intergenic 30.0%
AGTAAAATTCATCCGTCTAT+TGG - chr5_2:56966389-56966408 Msa0777680:intron 30.0%
TCCGTCTATTGGTATTTATA+AGG - chr5_2:56966400-56966419 Msa0777680:intron 30.0%
!! ATTATGTTGGTATTGACTTC+TGG - chr5_2:56966434-56966453 Msa0777680:intron 30.0%
TGAACAAAGTTGTTATCTTG+TGG - chr5_2:56966759-56966778 Msa0777680:intron 30.0%
CTCTTTCTTACCAAAGATTT+CGG - chr5_2:56966858-56966877 Msa0777680:intron 30.0%
!!! GGTCTGTTTTGTTATTTTCT+TGG - chr5_2:56966879-56966898 Msa0777680:intron 30.0%
!! ATGAAGACATTGCTATTTCT+CGG - chr5_2:56966922-56966941 Msa0777680:CDS 30.0%
TCTTGATATCTTGAAAGAGA+AGG - chr5_2:56966956-56966975 Msa0777680:intron 30.0%
ATTCTTGATTGTAAACCAGT+TGG - chr5_2:56966979-56966998 Msa0777680:intron 30.0%
TTATGTAGAAGCTTCACATT+AGG + chr5_2:56967022-56967041 None:intergenic 30.0%
ACGTATATTAAAAGGTCACT+TGG - chr5_2:56967205-56967224 Msa0777680:intron 30.0%
CGTATATTAAAAGGTCACTT+GGG - chr5_2:56967206-56967225 Msa0777680:intron 30.0%
TTGGATATTCAAATGCAGAT+TGG - chr5_2:56967269-56967288 Msa0777680:intron 30.0%
TGGATATTCAAATGCAGATT+GGG - chr5_2:56967270-56967289 Msa0777680:intron 30.0%
ATTCAACCATAAAAGTTCAC+AGG + chr5_2:56967394-56967413 None:intergenic 30.0%
! GAGTTGAAATTTTATGAGCT+AGG - chr5_2:56967426-56967445 Msa0777680:intron 30.0%
TAAATCCTCTCTTGAAAAAC+AGG + chr5_2:56967504-56967523 None:intergenic 30.0%
!! AGGTTTTAATGATGTCAGAA+AGG + chr5_2:56967565-56967584 None:intergenic 30.0%
ATTATTTGAGCTCATTGAAG+AGG + chr5_2:56967585-56967604 None:intergenic 30.0%
! ATTATTCACCTCGATCATTT+TGG - chr5_2:56967806-56967825 Msa0777680:intron 30.0%
! TCAATTTTCCAAAATGATCG+AGG + chr5_2:56967817-56967836 None:intergenic 30.0%
CGTGGAAAACTAAATTGATA+CGG - chr5_2:56967840-56967859 Msa0777680:intron 30.0%
ATACGGTCCTATATAATTTC+AGG - chr5_2:56967857-56967876 Msa0777680:intron 30.0%
TACGGTCCTATATAATTTCA+GGG - chr5_2:56967858-56967877 Msa0777680:intron 30.0%
TTTGGTCCCTGAAATTATAT+AGG + chr5_2:56967867-56967886 None:intergenic 30.0%
CCACAACACAATAAATAAGA+GGG + chr5_2:56968047-56968066 None:intergenic 30.0%
ACCACAACACAATAAATAAG+AGG + chr5_2:56968048-56968067 None:intergenic 30.0%
! GGATTATTGACTATTGTTGT+TGG - chr5_2:56968090-56968109 Msa0777680:CDS 30.0%
! TTGACTATTGTTGTTGGTAA+TGG - chr5_2:56968096-56968115 Msa0777680:CDS 30.0%
ATTGGAATGCCAATATCTAA+TGG + chr5_2:56968510-56968529 None:intergenic 30.0%
GAATGAATCTTGAAAAACCA+AGG + chr5_2:56968569-56968588 None:intergenic 30.0%
! AATTCGTTTAGTTTCAAGGA+AGG - chr5_2:56968668-56968687 Msa0777680:CDS 30.0%
CTGTGATTATGAAAAATAGG+TGG + chr5_2:56968813-56968832 None:intergenic 30.0%
TCAACTAGTGTAGATCATTT+AGG - chr5_2:56969351-56969370 Msa0777680:intron 30.0%
!!! GTATCTTAATTTTGACTTCC+TGG - chr5_2:56969400-56969419 Msa0777680:intron 30.0%
TTAATGAAAACATAGACACC+AGG + chr5_2:56969421-56969440 None:intergenic 30.0%
! TTTTACACTTTCTATCACAC+AGG - chr5_2:56969582-56969601 Msa0777680:intron 30.0%
TTCATGTTTAGATCAGTTCA+AGG + chr5_2:56969615-56969634 None:intergenic 30.0%
!!! TGCTCTTTTGTTTTCGTTTT+TGG - chr5_2:56969646-56969665 Msa0777680:intron 30.0%
TTCAATTTGGTTATCGCTAT+GGG - chr5_2:56969963-56969982 Msa0777680:intron 30.0%
GTACCTAAAGAGTAAGTAAT+TGG - chr5_2:56970070-56970089 Msa0777680:intron 30.0%
GAACCAATTACTTACTCTTT+AGG + chr5_2:56970076-56970095 None:intergenic 30.0%
! AGAGTAAGTAATTGGTTCTT+TGG - chr5_2:56970078-56970097 Msa0777680:intron 30.0%
!!! ACTCATCCTTTTTTTTTTGC+AGG - chr5_2:56970233-56970252 Msa0777680:intron 30.0%
!!! CTCATCCTTTTTTTTTTGCA+GGG - chr5_2:56970234-56970253 Msa0777680:intron 30.0%
TCATACCCTGCAAAAAAAAA+AGG + chr5_2:56970242-56970261 None:intergenic 30.0%
!!! TTTTTTTTTTGCAGGGTATG+AGG - chr5_2:56970241-56970260 Msa0777680:intron 30.0%
AAGAGCAGTACTAAATATAG+CGG + chr5_2:56970318-56970337 None:intergenic 30.0%
!!! TGTGTTTTGCTATTGTATTG+AGG - chr5_2:56970477-56970496 Msa0777680:intron 30.0%
!! CGTCATTTTGGAGATAATTA+TGG - chr5_2:56971047-56971066 Msa0777680:intron 30.0%
TACACACATAAAGTCAAGAA+TGG - chr5_2:56971182-56971201 Msa0777680:intron 30.0%
! TTCTCCAACTACATAGTTTT+CGG + chr5_2:56971226-56971245 None:intergenic 30.0%
TATGTAGTTGGAGAAAATCA+AGG - chr5_2:56971231-56971250 Msa0777680:intron 30.0%
!!! ACTACATGAGTTTGTTTTTG+TGG + chr5_2:56971380-56971399 None:intergenic 30.0%
! AGATTTGTTTGATCTATGGT+AGG - chr5_2:56971603-56971622 Msa0777680:CDS 30.0%
!!! CATATTTTAGGATGCTTTTG+GGG + chr5_2:56971666-56971685 None:intergenic 30.0%
!!! CACATATTTTAGGATGCTTT+TGG + chr5_2:56971668-56971687 None:intergenic 30.0%
! AAAGCATCCTAAAATATGTG+AGG - chr5_2:56971668-56971687 Msa0777680:CDS 30.0%
AGAGTAACACTTTATGAAGA+TGG - chr5_2:56971857-56971876 Msa0777680:intron 30.0%
!!! AAAAGGATACATGCTGATTT+TGG - chr5_2:56972243-56972262 Msa0777680:intron 30.0%
!!! CAAAGGTGTCAATTTTATGA+CGG - chr5_2:56972307-56972326 Msa0777680:CDS 30.0%
!!! AAAGGTGTCAATTTTATGAC+GGG - chr5_2:56972308-56972327 Msa0777680:CDS 30.0%
TAAATGAAGGCCAAAATTTG+AGG + chr5_2:56972402-56972421 None:intergenic 30.0%
GTGTATGTGATCATATTTAC+TGG - chr5_2:56972436-56972455 Msa0777680:intron 30.0%
! CTTTTTCCTGTCACAATATT+AGG + chr5_2:56972505-56972524 None:intergenic 30.0%
TGGCATTATTATGGAGTAAA+GGG + chr5_2:56972619-56972638 None:intergenic 30.0%
AAAGTAAACTAAAGGAATGG+TGG + chr5_2:56972639-56972658 None:intergenic 30.0%
CCAAAAGTAAACTAAAGGAA+TGG + chr5_2:56972642-56972661 None:intergenic 30.0%
!! CCATTCCTTTAGTTTACTTT+TGG - chr5_2:56972639-56972658 Msa0777680:intron 30.0%
!! TTTACTTTTGGCCATCAAAT+AGG - chr5_2:56972651-56972670 Msa0777680:intron 30.0%
ATCAAACAGATCCTATTTGA+TGG + chr5_2:56972665-56972684 None:intergenic 30.0%
CCAATTTAATTGACCTACTT+TGG + chr5_2:56973168-56973187 None:intergenic 30.0%
CCAAAGTAGGTCAATTAAAT+TGG - chr5_2:56973165-56973184 Msa0777680:intron 30.0%
TTATGTAATTACGGCACTTA+AGG - chr5_2:56973229-56973248 Msa0777680:intron 30.0%
ACAGAAAGAAAGATACTAGA+TGG - chr5_2:56973607-56973626 Msa0777680:intron 30.0%
!! GTAAAAGTGTTGCAATTGTT+GGG - chr5_2:56973653-56973672 Msa0777680:intron 30.0%
CAAAAAAAAATTCCGACCAT+AGG + chr5_2:56973755-56973774 None:intergenic 30.0%
AAAGGGTAAAAATATAGCCA+CGG + chr5_2:56973780-56973799 None:intergenic 30.0%
TGAAAAATAAAGGGAAACAG+TGG + chr5_2:56973864-56973883 None:intergenic 30.0%
! TTGGTAACTTCGTTGAATAA+TGG - chr5_2:56973925-56973944 Msa0777680:intron 30.0%
TCGGTATTCAAATTTGGATA+TGG - chr5_2:56974095-56974114 Msa0777680:CDS 30.0%
!!! TGGTGTTCTGTTTTATTTTC+TGG - chr5_2:56974115-56974134 Msa0777680:CDS 30.0%
ATTTCTTACACTTCCAGAAT+GGG + chr5_2:56974248-56974267 None:intergenic 30.0%
TTGATGTTTACTGTCCTATT+TGG - chr5_2:56974316-56974335 Msa0777680:intron 30.0%
CAATTACATGTATCAAACCA+CGG + chr5_2:56974460-56974479 None:intergenic 30.0%
GATAGATGATCAAGATATTC+GGG - chr5_2:56974584-56974603 Msa0777680:intron 30.0%
TGTTTACTTACAGTATCTTG+TGG + chr5_2:56974651-56974670 None:intergenic 30.0%
CAAATGTATAGCAGTACAAA+AGG + chr5_2:56974821-56974840 None:intergenic 30.0%
TGAACAGTTGTAACTTGATA+TGG - chr5_2:56975094-56975113 Msa0777680:intron 30.0%
!! TGATAGCTAAATTTTAAGGG+AGG + chr5_2:56975137-56975156 None:intergenic 30.0%
! GACAATCTCTCAAATTTTCA+CGG - chr5_2:56975333-56975352 Msa0777680:intron 30.0%
AAATGACTCCTCTATCAAAA+TGG + chr5_2:56975521-56975540 None:intergenic 30.0%
TATTCCAGAACACATATAAC+TGG - chr5_2:56975880-56975899 Msa0777680:intron 30.0%
AAAACCAGTTATATGTGTTC+TGG + chr5_2:56975887-56975906 None:intergenic 30.0%
! TGTGTGACGAATTTTTATGA+TGG + chr5_2:56975957-56975976 None:intergenic 30.0%
! TTTTGATGTAAGTCATGCAA+TGG + chr5_2:56976029-56976048 None:intergenic 30.0%
! GCAATTTCAGATCATTGTTT+TGG - chr5_2:56976066-56976085 Msa0777680:intron 30.0%
!!! CAGATCATTGTTTTGGAAAA+TGG - chr5_2:56976073-56976092 Msa0777680:intron 30.0%
!!! TGTTTTGGAAAATGGAAAGA+TGG - chr5_2:56976081-56976100 Msa0777680:intron 30.0%
!! CTTGTTATTTAGAAGTGCTT+TGG + chr5_2:56976537-56976556 None:intergenic 30.0%
GCAAAATAAGCAATATACAC+TGG + chr5_2:56976593-56976612 None:intergenic 30.0%
ATTAGAATCACTTCTTTACG+AGG + chr5_2:56976692-56976711 None:intergenic 30.0%
AAACGAAGCTCTACTATTTG+AGG + chr5_2:56965658-56965677 None:intergenic 35.0%
!!! GCTGCAACTTTTTTACTTGT+TGG - chr5_2:56965834-56965853 Msa0777680:three_prime_UTR 35.0%
TGCTATATATATACTCCCTC+CGG - chr5_2:56965904-56965923 Msa0777680:three_prime_UTR 35.0%
! CCGGAGTAGTAACTTTTAAA+TGG + chr5_2:56966050-56966069 None:intergenic 35.0%
! TCTTTGCTTGTATTTGAGAC+CGG - chr5_2:56966119-56966138 Msa0777680:exon 35.0%
ATGTAGATGATATTGTCCGT+AGG + chr5_2:56966570-56966589 None:intergenic 35.0%
!! GGTTGAATAAGTGTTGCTTT+AGG + chr5_2:56966839-56966858 None:intergenic 35.0%
CGAAATCTTTGGTAAGAAAG+AGG + chr5_2:56966860-56966879 None:intergenic 35.0%
ACAAAACAGACCGAAATCTT+TGG + chr5_2:56966871-56966890 None:intergenic 35.0%
!! CTATAGAAGTATCAACCAAC+TGG + chr5_2:56966997-56967016 None:intergenic 35.0%
! GCATATAGATGAGGTTAGTT+GGG - chr5_2:56967068-56967087 Msa0777680:intron 35.0%
TTTCTAAACTCACCTTGTGA+TGG - chr5_2:56967154-56967173 Msa0777680:intron 35.0%
TCATTCCAATTACCATCACA+AGG + chr5_2:56967169-56967188 None:intergenic 35.0%
!! TGACTTGTTTATTACGACAG+AGG - chr5_2:56967232-56967251 Msa0777680:intron 35.0%
AGAGGCTATACCAATATTGT+TGG - chr5_2:56967250-56967269 Msa0777680:intron 35.0%
TTGGAGGAAACTTAATCTCA+TGG - chr5_2:56967341-56967360 Msa0777680:CDS 35.0%
TAAAAGTTCACAGGTAGTGT+AGG + chr5_2:56967385-56967404 None:intergenic 35.0%
! ACACTACCTGTGAACTTTTA+TGG - chr5_2:56967385-56967404 Msa0777680:CDS 35.0%
!!! CAAATCCTGTTTTTCAAGAG+AGG - chr5_2:56967496-56967515 Msa0777680:intron 35.0%
!! TAGAGGTTTGGTGAAGATAT+CGG + chr5_2:56967615-56967634 None:intergenic 35.0%
AAGAGAGAATCTCCCAAAAA+AGG + chr5_2:56967736-56967755 None:intergenic 35.0%
! CCCTCTTATTTATTGTGTTG+TGG - chr5_2:56968044-56968063 Msa0777680:intron 35.0%
!!! GTGCTCTATTTTTGTCTTTC+AGG - chr5_2:56968150-56968169 Msa0777680:intron 35.0%
!!! CTTTCAGGTTTTGAATGTTC+AGG - chr5_2:56968165-56968184 Msa0777680:intron 35.0%
CTCCAAGCTTGAATAAGAAA+GGG + chr5_2:56968192-56968211 None:intergenic 35.0%
ACTCCAAGCTTGAATAAGAA+AGG + chr5_2:56968193-56968212 None:intergenic 35.0%
! TATTCAAGCTTGGAGTTGAT+TGG - chr5_2:56968197-56968216 Msa0777680:intron 35.0%
GACACATTAACTCATGAGTT+GGG + chr5_2:56968406-56968425 None:intergenic 35.0%
AGACACATTAACTCATGAGT+TGG + chr5_2:56968407-56968426 None:intergenic 35.0%
GAGTTAATGTGTCTAACTTG+AGG - chr5_2:56968413-56968432 Msa0777680:intron 35.0%
GATTCTCCTCCATTAGATAT+TGG - chr5_2:56968498-56968517 Msa0777680:intron 35.0%
!!! TGTTTTCTAAGGTAGCACTA+CGG - chr5_2:56968643-56968662 Msa0777680:intron 35.0%
! GGACAATTCGTTTAGTTTCA+AGG - chr5_2:56968664-56968683 Msa0777680:CDS 35.0%
TAGTTGGTTGTATGATGTCA+CGG - chr5_2:56968835-56968854 Msa0777680:intron 35.0%
TGTTAGTATTTGACTGTTGC+AGG - chr5_2:56968869-56968888 Msa0777680:intron 35.0%
TTAGATGATATCGAAGGTCA+AGG + chr5_2:56968914-56968933 None:intergenic 35.0%
TTGACCTTCGATATCATCTA+AGG - chr5_2:56968913-56968932 Msa0777680:intron 35.0%
CATACCTTAGATGATATCGA+AGG + chr5_2:56968920-56968939 None:intergenic 35.0%
! CTTCGATATCATCTAAGGTA+TGG - chr5_2:56968918-56968937 Msa0777680:intron 35.0%
! ACAGATTAGCCATTTCTTCA+TGG + chr5_2:56968950-56968969 None:intergenic 35.0%
GGAGGAGAATATTATCTACT+GGG + chr5_2:56969106-56969125 None:intergenic 35.0%
TGGAGGAGAATATTATCTAC+TGG + chr5_2:56969107-56969126 None:intergenic 35.0%
ATGCAGAAAAGAAGCAGAAA+TGG + chr5_2:56969127-56969146 None:intergenic 35.0%
TTAAGTCGAACAATTGATCG+TGG - chr5_2:56969219-56969238 Msa0777680:intron 35.0%
TACTATGTTGAACAACGTAG+AGG + chr5_2:56969271-56969290 None:intergenic 35.0%
CATAGTACCTACCATATTAG+AGG - chr5_2:56969284-56969303 Msa0777680:intron 35.0%
GCAACAAGAAAAGAAAACTG+AGG + chr5_2:56969314-56969333 None:intergenic 35.0%
! GTGTAGATCATTTAGGATCA+CGG - chr5_2:56969358-56969377 Msa0777680:intron 35.0%
CATATCGATCCAGATATCTA+TGG - chr5_2:56969483-56969502 Msa0777680:intron 35.0%
ATCCAGATATCTATGGTATC+AGG - chr5_2:56969490-56969509 Msa0777680:intron 35.0%
TACCTGATACCATAGATATC+TGG + chr5_2:56969495-56969514 None:intergenic 35.0%
ATCTATGGTATCAGGTATTC+TGG - chr5_2:56969498-56969517 Msa0777680:intron 35.0%
!! AAAAGGTGCTCCATATTTGT+AGG + chr5_2:56969524-56969543 None:intergenic 35.0%
AATATATGCAGCAACTGACA+GGG + chr5_2:56969560-56969579 None:intergenic 35.0%
TTGTAATTAGCCAACTGCAT+TGG - chr5_2:56969746-56969765 Msa0777680:CDS 35.0%
! TATATTCTCTGCCTTTTCAG+TGG - chr5_2:56969804-56969823 Msa0777680:CDS 35.0%
AATTTAGTCCTCCACTGAAA+AGG + chr5_2:56969818-56969837 None:intergenic 35.0%
ATTCAGGAAAGCCATGAATA+AGG - chr5_2:56969835-56969854 Msa0777680:intron 35.0%
!! GTCATTATCAGCCTTATTCA+TGG + chr5_2:56969849-56969868 None:intergenic 35.0%
! TGATAATGACGCTAGTACTA+GGG - chr5_2:56969859-56969878 Msa0777680:intron 35.0%
CTTCAATTTGGTTATCGCTA+TGG - chr5_2:56969962-56969981 Msa0777680:intron 35.0%
! AGTCTTGCTTTGTTGAACTT+TGG - chr5_2:56970287-56970306 Msa0777680:intron 35.0%
!!! CAATGGTTTTGTGTTCTCAT+GGG - chr5_2:56970345-56970364 Msa0777680:intron 35.0%
AAATTCACAAAAATCACCGG+AGG + chr5_2:56970512-56970531 None:intergenic 35.0%
! AATATGCAGGTGATGGTAAA+TGG - chr5_2:56970647-56970666 Msa0777680:intron 35.0%
! ATATGCAGGTGATGGTAAAT+GGG - chr5_2:56970648-56970667 Msa0777680:intron 35.0%
AATAGAGTGGAAGAGATAGT+TGG + chr5_2:56970682-56970701 None:intergenic 35.0%
TACCTCAAGTAACTGAAACA+TGG + chr5_2:56970756-56970775 None:intergenic 35.0%
AAATGTAAGTGTTAGCCGTT+AGG - chr5_2:56970899-56970918 Msa0777680:intron 35.0%
! TCGAAGTTCTTCAAGTTTGT+CGG - chr5_2:56971096-56971115 Msa0777680:intron 35.0%
TACTAGCATTGTGAGAAATC+TGG + chr5_2:56971131-56971150 None:intergenic 35.0%
TCCATCATAGGAATTCTTCA+TGG - chr5_2:56971159-56971178 Msa0777680:intron 35.0%
ACCATGAAGAATTCCTATGA+TGG + chr5_2:56971163-56971182 None:intergenic 35.0%
AACTCTACTCCTCATTTGTA+GGG - chr5_2:56971463-56971482 Msa0777680:intron 35.0%
! TGGCAATCCTCACATATTTT+AGG + chr5_2:56971678-56971697 None:intergenic 35.0%
AAGTAGTCCTTATAAGGCTT+TGG + chr5_2:56971698-56971717 None:intergenic 35.0%
! AAGCCTTATAAGGACTACTT+TGG - chr5_2:56971698-56971717 Msa0777680:intron 35.0%
TGACCAAAGTAGTCCTTATA+AGG + chr5_2:56971704-56971723 None:intergenic 35.0%
GAGGCTAATGTGAAATAATG+AGG - chr5_2:56971804-56971823 Msa0777680:intron 35.0%
! AACCAATTTCCTAGGTTTTG+CGG + chr5_2:56971832-56971851 None:intergenic 35.0%
AAGATGGAGTGTACTATACA+AGG - chr5_2:56971873-56971892 Msa0777680:intron 35.0%
AGATGGAGTGTACTATACAA+GGG - chr5_2:56971874-56971893 Msa0777680:intron 35.0%
TCTACTTTCTAATGAGCTTC+CGG - chr5_2:56972090-56972109 Msa0777680:intron 35.0%
GAATTATACAAAGACAGCCT+AGG - chr5_2:56972217-56972236 Msa0777680:intron 35.0%
! ATTTTGGATCCCATGACATT+TGG - chr5_2:56972259-56972278 Msa0777680:intron 35.0%
! TTTTGGATCCCATGACATTT+GGG - chr5_2:56972260-56972279 Msa0777680:intron 35.0%
! ACACCTTTGATAACTGATTC+CGG + chr5_2:56972296-56972315 None:intergenic 35.0%
GGAAAATTGTAATCTGACAC+AGG + chr5_2:56972381-56972400 None:intergenic 35.0%
TCCTGTCACAATATTAGGAA+TGG + chr5_2:56972500-56972519 None:intergenic 35.0%
ACAGGAAAAAGCAGACATTA+AGG - chr5_2:56972514-56972533 Msa0777680:intron 35.0%
AAGAAAATGCAAAGCCTCTA+AGG - chr5_2:56972540-56972559 Msa0777680:intron 35.0%
!! CAAAGCCTCTAAGGTTTAAT+GGG - chr5_2:56972549-56972568 Msa0777680:intron 35.0%
!! AAAGCCTCTAAGGTTTAATG+GGG - chr5_2:56972550-56972569 Msa0777680:intron 35.0%
GTGGCATTATTATGGAGTAA+AGG + chr5_2:56972620-56972639 None:intergenic 35.0%
AAGGAATGGTGGCATTATTA+TGG + chr5_2:56972628-56972647 None:intergenic 35.0%
GATGGCCAAAAGTAAACTAA+AGG + chr5_2:56972647-56972666 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr5_2:56972983-56973002 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr5_2:56973152-56973171 Msa0777680:intron 35.0%
GTAGGTCAATTAAATTGGGA+CGG - chr5_2:56973170-56973189 Msa0777680:intron 35.0%
TAATTACGGCACTTAAGGTA+AGG - chr5_2:56973234-56973253 Msa0777680:intron 35.0%
CTAGTATCTTTCTTTCTGTG+AGG + chr5_2:56973606-56973625 None:intergenic 35.0%
!! GGTAAAAGTGTTGCAATTGT+TGG - chr5_2:56973652-56973671 Msa0777680:intron 35.0%
!!! CGGAATTTTTTTTTGTTCCG+TGG - chr5_2:56973760-56973779 Msa0777680:intron 35.0%
TCAACGAAGTTACCAAGAAA+AGG + chr5_2:56973921-56973940 None:intergenic 35.0%
AGATATCTGATGGAAGATCA+TGG - chr5_2:56973980-56973999 Msa0777680:intron 35.0%
! CAATGCAAAAGCATGATACA+TGG + chr5_2:56974018-56974037 None:intergenic 35.0%
! TCTGAATAGCATTCTGAGAA+GGG + chr5_2:56974215-56974234 None:intergenic 35.0%
! ATCTGAATAGCATTCTGAGA+AGG + chr5_2:56974216-56974235 None:intergenic 35.0%
!!! AGATTTTTTGATCCCCATTC+TGG - chr5_2:56974232-56974251 Msa0777680:intron 35.0%
TTTCTTACACTTCCAGAATG+GGG + chr5_2:56974247-56974266 None:intergenic 35.0%
CATTTCTTACACTTCCAGAA+TGG + chr5_2:56974249-56974268 None:intergenic 35.0%
TAATGACCATCGATCCAAAT+AGG + chr5_2:56974333-56974352 None:intergenic 35.0%
ATGTATCCCTTGAGAGTTTA+CGG - chr5_2:56974607-56974626 Msa0777680:intron 35.0%
AAACCTGAGTGATTATGTGT+AGG - chr5_2:56974727-56974746 Msa0777680:intron 35.0%
TTCATAACATTCACTATGGC+CGG - chr5_2:56974771-56974790 Msa0777680:intron 35.0%
AACATGTTGGAACCTAACAA+AGG + chr5_2:56974868-56974887 None:intergenic 35.0%
!! ACAACAGTGGAGTATTTTTC+AGG + chr5_2:56974972-56974991 None:intergenic 35.0%
TGAAAAATACTCCACTGTTG+TGG - chr5_2:56974971-56974990 Msa0777680:intron 35.0%
GAAAAATACTCCACTGTTGT+GGG - chr5_2:56974972-56974991 Msa0777680:intron 35.0%
CATCAAAGCACGATAAATAG+TGG + chr5_2:56975023-56975042 None:intergenic 35.0%
! CAATTTTATTGGCATGCCAT+TGG - chr5_2:56975055-56975074 Msa0777680:intron 35.0%
AACTACAATCATCACACCAA+TGG + chr5_2:56975074-56975093 None:intergenic 35.0%
ACTTGATATGGACAAACACT+TGG - chr5_2:56975106-56975125 Msa0777680:intron 35.0%
ACCGAGTATTCCATACTATT+CGG - chr5_2:56975188-56975207 Msa0777680:intron 35.0%
ACCGAATAGTATGGAATACT+CGG + chr5_2:56975192-56975211 None:intergenic 35.0%
!! TATTCCATACTATTCGGTGT+GGG - chr5_2:56975194-56975213 Msa0777680:intron 35.0%
! AAGCATGTTGATAAGGACTT+GGG + chr5_2:56975239-56975258 None:intergenic 35.0%
TTTACAGTATTGCATTAGGG+AGG + chr5_2:56975299-56975318 None:intergenic 35.0%
CAGAATACTTACAGTATTGC+AGG + chr5_2:56975432-56975451 None:intergenic 35.0%
!! GTGTGTTACCATTTTGATAG+AGG - chr5_2:56975510-56975529 Msa0777680:intron 35.0%
TAATGAAACAAGCGTGTGTA+TGG + chr5_2:56975558-56975577 None:intergenic 35.0%
ACACGGCAGTTAAAAGAAAA+TGG + chr5_2:56975583-56975602 None:intergenic 35.0%
TAAGTCATGCAATGGCATAA+GGG + chr5_2:56976021-56976040 None:intergenic 35.0%
AATTGATACAGCCATCAAAG+TGG - chr5_2:56976189-56976208 Msa0777680:intron 35.0%
ATTGATACAGCCATCAAAGT+GGG - chr5_2:56976190-56976209 Msa0777680:intron 35.0%
! ATACAAAATCTTGCTGTCCA+CGG + chr5_2:56976476-56976495 None:intergenic 35.0%
AGTCTAGCACTCAATATACA+AGG + chr5_2:56976568-56976587 None:intergenic 35.0%
! GAGAACAATGCATCTTTTTC+TGG + chr5_2:56976666-56976685 None:intergenic 35.0%
TTCTGTTACCGTGACTGTAA+CGG + chr5_2:56965545-56965564 None:intergenic 40.0%
!! TTGGACATGGTTTGAGTTGA+CGG + chr5_2:56965581-56965600 None:intergenic 40.0%
! GCTTCGTTTTCAACTGATGA+TGG - chr5_2:56965669-56965688 Msa0777680:three_prime_UTR 40.0%
! TTCTTACATTTGAGACCGGA+GGG + chr5_2:56965970-56965989 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG + chr5_2:56965969-56965988 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG - chr5_2:56965969-56965988 Msa0777680:three_prime_UTR 40.0%
! TTCTTACATTTGAGACCGGA+GGG - chr5_2:56965970-56965989 Msa0777680:three_prime_UTR 40.0%
! TGACTACCAAGTTAGCTTCT+AGG - chr5_2:56966011-56966030 Msa0777680:three_prime_UTR 40.0%
TCTCATCCTAGAAGCTAACT+TGG + chr5_2:56966020-56966039 None:intergenic 40.0%
!! AGGAGGAGAGTACTTACTTA+GGG - chr5_2:56966142-56966161 Msa0777680:CDS 40.0%
AAGTGGTCTCAGCAAAACAT+GGG + chr5_2:56966534-56966553 None:intergenic 40.0%
TAAGTGGTCTCAGCAAAACA+TGG + chr5_2:56966535-56966554 None:intergenic 40.0%
TGAGACCACTTAAAGCATGT+GGG - chr5_2:56966543-56966562 Msa0777680:intron 40.0%
!! TTGGTTCGGAAAGTTCAACA+AGG - chr5_2:56966670-56966689 Msa0777680:CDS 40.0%
! GAAGAGCTATTTCCTAACCT+AGG - chr5_2:56967046-56967065 Msa0777680:intron 40.0%
CTCATCTATATGCCTAGGTT+AGG + chr5_2:56967061-56967080 None:intergenic 40.0%
CTAACCTAGGCATATAGATG+AGG - chr5_2:56967059-56967078 Msa0777680:intron 40.0%
CTAACCTCATCTATATGCCT+AGG + chr5_2:56967066-56967085 None:intergenic 40.0%
GGCATATAGATGAGGTTAGT+TGG - chr5_2:56967067-56967086 Msa0777680:intron 40.0%
ACTCACCTTGTGATGGTAAT+TGG - chr5_2:56967161-56967180 Msa0777680:intron 40.0%
TGATGGTAATTGGAATGACG+TGG - chr5_2:56967171-56967190 Msa0777680:intron 40.0%
GTAATTGGAATGACGTGGTT+CGG - chr5_2:56967176-56967195 Msa0777680:intron 40.0%
! ATTTTATGAGCTAGGCCCTA+TGG - chr5_2:56967434-56967453 Msa0777680:intron 40.0%
GTAACAAACTGGATGCATTG+CGG - chr5_2:56967659-56967678 Msa0777680:intron 40.0%
TAACAAACTGGATGCATTGC+GGG - chr5_2:56967660-56967679 Msa0777680:intron 40.0%
!! ACAATAAATAAGAGGGCGTC+TGG + chr5_2:56968040-56968059 None:intergenic 40.0%
GTCCCTTTCTTATTCAAGCT+TGG - chr5_2:56968187-56968206 Msa0777680:intron 40.0%
! TGATTGGTTGAATACTGCCA+CGG - chr5_2:56968213-56968232 Msa0777680:intron 40.0%
TGCTTCGAATCCTACTATGA+TGG - chr5_2:56968252-56968271 Msa0777680:intron 40.0%
!! GCAAAAAGTGCCATCATAGT+AGG + chr5_2:56968265-56968284 None:intergenic 40.0%
TATCCAATCAACACTGCCAT+GGG + chr5_2:56968292-56968311 None:intergenic 40.0%
ATATCCAATCAACACTGCCA+TGG + chr5_2:56968293-56968312 None:intergenic 40.0%
!! ATGGCAGTGTTGATTGGATA+TGG - chr5_2:56968292-56968311 Msa0777680:intron 40.0%
!! TGGCAGTGTTGATTGGATAT+GGG - chr5_2:56968293-56968312 Msa0777680:intron 40.0%
! TCATGAGTTGGGTTTCAGAT+AGG + chr5_2:56968395-56968414 None:intergenic 40.0%
ATGGAGGAGAATCACAACTA+GGG + chr5_2:56968491-56968510 None:intergenic 40.0%
AATGGAGGAGAATCACAACT+AGG + chr5_2:56968492-56968511 None:intergenic 40.0%
GGAATGCCAATATCTAATGG+AGG + chr5_2:56968507-56968526 None:intergenic 40.0%
! TGTTTCTTTGAGAAGAGCCT+TGG - chr5_2:56968549-56968568 Msa0777680:intron 40.0%
!!! GCGGAATGCTTTGTTTTCTA+AGG - chr5_2:56968632-56968651 Msa0777680:intron 40.0%
TGGCTTATGCCATGAAGAAA+TGG - chr5_2:56968938-56968957 Msa0777680:intron 40.0%
GCAAAGAAATCTCTCTTCTC+TGG + chr5_2:56969084-56969103 None:intergenic 40.0%
CAGAAAAGAAGCAGAAATGG+AGG + chr5_2:56969124-56969143 None:intergenic 40.0%
AGGCATACCTCTAATATGGT+AGG + chr5_2:56969294-56969313 None:intergenic 40.0%
ACTGAGGCATACCTCTAATA+TGG + chr5_2:56969298-56969317 None:intergenic 40.0%
GGATCACGGAGAATATTTAG+CGG - chr5_2:56969372-56969391 Msa0777680:intron 40.0%
GATCACGGAGAATATTTAGC+GGG - chr5_2:56969373-56969392 Msa0777680:intron 40.0%
GGTATTCTGGCCTACAAATA+TGG - chr5_2:56969511-56969530 Msa0777680:intron 40.0%
CAATATATGCAGCAACTGAC+AGG + chr5_2:56969561-56969580 None:intergenic 40.0%
CTGTCAGTTGCTGCATATAT+TGG - chr5_2:56969559-56969578 Msa0777680:intron 40.0%
! GGTCTTGTCAGATACATTAC+TGG - chr5_2:56969667-56969686 Msa0777680:intron 40.0%
TTCAGTGGAGGACTAAATTC+AGG - chr5_2:56969819-56969838 Msa0777680:intron 40.0%
! CTGATAATGACGCTAGTACT+AGG - chr5_2:56969858-56969877 Msa0777680:intron 40.0%
! AATCTTGGCAGTGTCGTTAT+TGG - chr5_2:56970136-56970155 Msa0777680:intron 40.0%
TCATACATCAACTCAGTGTG+GGG + chr5_2:56970178-56970197 None:intergenic 40.0%
GTCATACATCAACTCAGTGT+GGG + chr5_2:56970179-56970198 None:intergenic 40.0%
!! AAGACTCTGTTCGCTTTTCT+GGG + chr5_2:56970273-56970292 None:intergenic 40.0%
TACTGCTCTTTCAACAGCAA+TGG - chr5_2:56970328-56970347 Msa0777680:intron 40.0%
!!! GCAATGGTTTTGTGTTCTCA+TGG - chr5_2:56970344-56970363 Msa0777680:intron 40.0%
TGTTCTCATGGGATCATGAA+TGG - chr5_2:56970356-56970375 Msa0777680:intron 40.0%
ATGAATGGCAGAATGACTGT+TGG - chr5_2:56970371-56970390 Msa0777680:intron 40.0%
!! CAGAATGACTGTTGGTGATT+TGG - chr5_2:56970379-56970398 Msa0777680:intron 40.0%
ATTGAGGATCACTTATCCTC+CGG - chr5_2:56970493-56970512 Msa0777680:intron 40.0%
CTAACTCAATATGCAGGTGA+TGG - chr5_2:56970640-56970659 Msa0777680:intron 40.0%
TCTCTTCCACTCTATTTCCT+TGG - chr5_2:56970686-56970705 Msa0777680:intron 40.0%
! ACATGGCTTTCATGTCGATT+AGG + chr5_2:56970739-56970758 None:intergenic 40.0%
AGCCATGTTTCAGTTACTTG+AGG - chr5_2:56970751-56970770 Msa0777680:intron 40.0%
AATTGGGTGGAACTACCTAA+CGG + chr5_2:56970917-56970936 None:intergenic 40.0%
TCGAGTAGCAAATAATTGGG+TGG + chr5_2:56970930-56970949 None:intergenic 40.0%
! TTAGTTTGGATTAGAGGGCT+AGG - chr5_2:56970979-56970998 Msa0777680:intron 40.0%
TTTGGAGATAATTATGGCCG+TGG - chr5_2:56971053-56971072 Msa0777680:intron 40.0%
TTGGAGATAATTATGGCCGT+GGG - chr5_2:56971054-56971073 Msa0777680:intron 40.0%
AGTATCTGAGCTTCCATCAT+AGG - chr5_2:56971147-56971166 Msa0777680:intron 40.0%
AAGTCAAGAATGGAGTTGAC+TGG - chr5_2:56971192-56971211 Msa0777680:intron 40.0%
AATGGAGTTGACTGGATAGT+TGG - chr5_2:56971200-56971219 Msa0777680:intron 40.0%
TTGGCCGAAAACTATGTAGT+TGG - chr5_2:56971219-56971238 Msa0777680:intron 40.0%
!! ATCAAGGATCGAGCCATTTT+TGG - chr5_2:56971247-56971266 Msa0777680:intron 40.0%
TAGTCAACCACAGCCAAAAA+TGG + chr5_2:56971263-56971282 None:intergenic 40.0%
! CTCTTTTGAATCTTCAGCCA+AGG + chr5_2:56971286-56971305 None:intergenic 40.0%
TGGCAAAAGCAGTTCTTACA+AGG + chr5_2:56971417-56971436 None:intergenic 40.0%
CATGTGTCTCTAGTCAATGT+GGG - chr5_2:56971435-56971454 Msa0777680:intron 40.0%
CAACTCTACTCCTCATTTGT+AGG - chr5_2:56971462-56971481 Msa0777680:intron 40.0%
! AGGATTGCCAAAGCCTTATA+AGG - chr5_2:56971688-56971707 Msa0777680:intron 40.0%
! CATGCTTTAGATGTCATCCT+AGG + chr5_2:56971769-56971788 None:intergenic 40.0%
! CTAGGATGACATCTAAAGCA+TGG - chr5_2:56971767-56971786 Msa0777680:intron 40.0%
TCTCACTCAACCAATTTCCT+AGG + chr5_2:56971840-56971859 None:intergenic 40.0%
CTACTTTCTAATGAGCTTCC+GGG - chr5_2:56972091-56972110 Msa0777680:intron 40.0%
!! TATCTCCATGAAAGTACTCC+CGG + chr5_2:56972112-56972131 None:intergenic 40.0%
AAAGACAGCCTAGGTAGAAA+AGG - chr5_2:56972226-56972245 Msa0777680:intron 40.0%
! GCATGTATCCTTTTCTACCT+AGG + chr5_2:56972237-56972256 None:intergenic 40.0%
TTTGGATCCCATGACATTTG+GGG - chr5_2:56972261-56972280 Msa0777680:intron 40.0%
TAGGAAACCCCAAATGTCAT+GGG + chr5_2:56972271-56972290 None:intergenic 40.0%
GCAATATCTCAAAGTGATGC+AGG + chr5_2:56972474-56972493 None:intergenic 40.0%
GCCATTCCTAATATTGTGAC+AGG - chr5_2:56972496-56972515 Msa0777680:CDS 40.0%
!! GCAAAGCCTCTAAGGTTTAA+TGG - chr5_2:56972548-56972567 Msa0777680:intron 40.0%
!! AAGCCTCTAAGGTTTAATGG+GGG - chr5_2:56972551-56972570 Msa0777680:intron 40.0%
TTTCCCCCATTAAACCTTAG+AGG + chr5_2:56972557-56972576 None:intergenic 40.0%
GAAGTTGTCTCATAGTTCGT+TGG + chr5_2:56972803-56972822 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr5_2:56972982-56973001 None:intergenic 40.0%
AGTTGCGAAGTAAGAAAACG+AGG + chr5_2:56973350-56973369 None:intergenic 40.0%
! TCGTTTTCTTACTTCGCAAC+TGG - chr5_2:56973349-56973368 Msa0777680:intron 40.0%
! ATTGCAACACTTTTACCAGC+TGG + chr5_2:56973649-56973668 None:intergenic 40.0%
!!! AAACTTTTTTCCGCTGCCTA+TGG - chr5_2:56973736-56973755 Msa0777680:intron 40.0%
! AACTTTGTTTGTGATTGGGG+TGG + chr5_2:56973838-56973857 None:intergenic 40.0%
! CGCAACTTTGTTTGTGATTG+GGG + chr5_2:56973841-56973860 None:intergenic 40.0%
! GCGCAACTTTGTTTGTGATT+GGG + chr5_2:56973842-56973861 None:intergenic 40.0%
! GCAAAAGCATGATACATGGA+TGG + chr5_2:56974014-56974033 None:intergenic 40.0%
TACTGTCCTATTTGGATCGA+TGG - chr5_2:56974324-56974343 Msa0777680:intron 40.0%
AGACTTCCGTAAACTCTCAA+GGG + chr5_2:56974616-56974635 None:intergenic 40.0%
TAGACTTCCGTAAACTCTCA+AGG + chr5_2:56974617-56974636 None:intergenic 40.0%
GAGAGTTTACGGAAGTCTAT+TGG - chr5_2:56974618-56974637 Msa0777680:intron 40.0%
! AACATATTTCTGCCCTTGCT+AGG - chr5_2:56974690-56974709 Msa0777680:intron 40.0%
CAATTTGCAAGACCTAGCAA+GGG + chr5_2:56974705-56974724 None:intergenic 40.0%
ACAATTTGCAAGACCTAGCA+AGG + chr5_2:56974706-56974725 None:intergenic 40.0%
GTACCTACACATAATCACTC+AGG + chr5_2:56974733-56974752 None:intergenic 40.0%
! GAAAACTCGTGATAGTGTCA+TGG + chr5_2:56974950-56974969 None:intergenic 40.0%
GGTGGAGAATTTATGTGGTT+TGG + chr5_2:56975171-56975190 None:intergenic 40.0%
! TACTCGGTGGAGAATTTATG+TGG + chr5_2:56975176-56975195 None:intergenic 40.0%
GAATAGTATGGAATACTCGG+TGG + chr5_2:56975189-56975208 None:intergenic 40.0%
! GTATTCCATACTATTCGGTG+TGG - chr5_2:56975193-56975212 Msa0777680:intron 40.0%
! CAAGCATGTTGATAAGGACT+TGG + chr5_2:56975240-56975259 None:intergenic 40.0%
AGTCCTTATCAACATGCTTG+TGG - chr5_2:56975240-56975259 Msa0777680:intron 40.0%
GTCCTTATCAACATGCTTGT+GGG - chr5_2:56975241-56975260 Msa0777680:intron 40.0%
TCCTTATCAACATGCTTGTG+GGG - chr5_2:56975242-56975261 Msa0777680:intron 40.0%
AAGAAAGGAACACAAACCTC+TGG - chr5_2:56975266-56975285 Msa0777680:intron 40.0%
AGAAAGGAACACAAACCTCT+GGG - chr5_2:56975267-56975286 Msa0777680:intron 40.0%
! CTTCCATTTTCATTGCTCAC+AGG - chr5_2:56975700-56975719 Msa0777680:intron 40.0%
TTGGACTCATCTTCACTGTA+AGG - chr5_2:56975929-56975948 Msa0777680:intron 40.0%
GTAAGTCATGCAATGGCATA+AGG + chr5_2:56976022-56976041 None:intergenic 40.0%
AATGGAAAGATGGTTGAGCA+TGG - chr5_2:56976091-56976110 Msa0777680:intron 40.0%
!! TTTGCTAAGAGCACTTCATG+TGG + chr5_2:56976118-56976137 None:intergenic 40.0%
AGGAAGATATGCACAGCTTT+GGG - chr5_2:56976141-56976160 Msa0777680:intron 40.0%
TCTTTATGCTCCCACTTTGA+TGG + chr5_2:56976203-56976222 None:intergenic 40.0%
TTCCTTGCTCTTCAAGAAAG+AGG - chr5_2:56976237-56976256 Msa0777680:intron 40.0%
TTCCTCTTTCTTGAAGAGCA+AGG + chr5_2:56976242-56976261 None:intergenic 40.0%
GACACTGTATCACGAAACAA+TGG + chr5_2:56976300-56976319 None:intergenic 40.0%
AGGAAGCAGTTAAAAGCGAC+CGG + chr5_2:56965482-56965501 None:intergenic 45.0%
ACCATCACTAAATCACCTCC+AGG - chr5_2:56965720-56965739 Msa0777680:three_prime_UTR 45.0%
ACCTGGAGGTGATTTAGTGA+TGG + chr5_2:56965724-56965743 None:intergenic 45.0%
ATCACTAAATCACCTCCAGG+TGG - chr5_2:56965723-56965742 Msa0777680:three_prime_UTR 45.0%
! TTGCTTGTATTTGAGACCGG+AGG - chr5_2:56966122-56966141 Msa0777680:exon 45.0%
AAGTAAGTACTCTCCTCCTC+CGG + chr5_2:56966141-56966160 None:intergenic 45.0%
!! GAGGAGGAGAGTACTTACTT+AGG - chr5_2:56966141-56966160 Msa0777680:CDS 45.0%
!! GGAGGAGAGTACTTACTTAG+GGG - chr5_2:56966143-56966162 Msa0777680:CDS 45.0%
AGTACTTACTTAGGGGCCTT+TGG - chr5_2:56966150-56966169 Msa0777680:CDS 45.0%
AAGTCATACGAACAAGCGGT+GGG + chr5_2:56966507-56966526 None:intergenic 45.0%
AGGCAAGTCATACGAACAAG+CGG + chr5_2:56966511-56966530 None:intergenic 45.0%
CTGAGACCACTTAAAGCATG+TGG - chr5_2:56966542-56966561 Msa0777680:intron 45.0%
! TAGGACCCACATGCTTTAAG+TGG + chr5_2:56966551-56966570 None:intergenic 45.0%
CTTAAAGCATGTGGGTCCTA+CGG - chr5_2:56966551-56966570 Msa0777680:intron 45.0%
TCTACATAACCTTCTGCCTC+AGG - chr5_2:56966583-56966602 Msa0777680:intron 45.0%
CTACATAACCTTCTGCCTCA+GGG - chr5_2:56966584-56966603 Msa0777680:intron 45.0%
TACATAACCTTCTGCCTCAG+GGG - chr5_2:56966585-56966604 Msa0777680:intron 45.0%
GAAAACAATCACCTCGAGCT+TGG - chr5_2:56966651-56966670 Msa0777680:CDS 45.0%
ATCTTCACCAAACCTCTACG+TGG - chr5_2:56967617-56967636 Msa0777680:intron 45.0%
TGCTGCTAAGTCACTTGTGA+TGG - chr5_2:56968124-56968143 Msa0777680:CDS 45.0%
! GATTGGTTGAATACTGCCAC+GGG - chr5_2:56968214-56968233 Msa0777680:intron 45.0%
ATCCAATCAACACTGCCATG+GGG + chr5_2:56968291-56968310 None:intergenic 45.0%
! TCTGGAGCTTCTGCTTTCAA+TGG - chr5_2:56968325-56968344 Msa0777680:intron 45.0%
AACTGATTGTGGCAGAACTG+CGG - chr5_2:56968613-56968632 Msa0777680:intron 45.0%
CGAACAATTGATCGTGGTAG+CGG - chr5_2:56969225-56969244 Msa0777680:intron 45.0%
!! AATATGGAGCACCTTTTGCG+TGG - chr5_2:56969527-56969546 Msa0777680:intron 45.0%
AGGGAAGTAATCCACGCAAA+AGG + chr5_2:56969541-56969560 None:intergenic 45.0%
! AATTAGCCAACTGCATTGGC+AGG - chr5_2:56969750-56969769 Msa0777680:CDS 45.0%
! ATTAGCCAACTGCATTGGCA+GGG - chr5_2:56969751-56969770 Msa0777680:CDS 45.0%
! ATTTTCCCTGCCAATGCAGT+TGG + chr5_2:56969759-56969778 None:intergenic 45.0%
! AACTGCATTGGCAGGGAAAA+TGG - chr5_2:56969758-56969777 Msa0777680:CDS 45.0%
! ATTCTCTGCCTTTTCAGTGG+AGG - chr5_2:56969807-56969826 Msa0777680:CDS 45.0%
ATCAACTCAGTGTGGGGATT+TGG + chr5_2:56970172-56970191 None:intergenic 45.0%
GGTCATACATCAACTCAGTG+TGG + chr5_2:56970180-56970199 None:intergenic 45.0%
!! CAAGACTCTGTTCGCTTTTC+TGG + chr5_2:56970274-56970293 None:intergenic 45.0%
CTTCCACTCTATTTCCTTGG+TGG - chr5_2:56970689-56970708 Msa0777680:intron 45.0%
ACACCACCAAGGAAATAGAG+TGG + chr5_2:56970695-56970714 None:intergenic 45.0%
TTGCACGATAAACACCACCA+AGG + chr5_2:56970706-56970725 None:intergenic 45.0%
ACACACACAAGTGCATACTC+AGG + chr5_2:56970856-56970875 None:intergenic 45.0%
TGCACTTGTGTGTGTGAACA+TGG - chr5_2:56970861-56970880 Msa0777680:intron 45.0%
TCATAGGAGGAAGGGATTAG+AGG - chr5_2:56971015-56971034 Msa0777680:intron 45.0%
CATAGGAGGAAGGGATTAGA+GGG - chr5_2:56971016-56971035 Msa0777680:intron 45.0%
TGGAGATAATTATGGCCGTG+GGG - chr5_2:56971055-56971074 Msa0777680:intron 45.0%
ATAATTATGGCCGTGGGGAT+AGG - chr5_2:56971060-56971079 Msa0777680:intron 45.0%
TAATTATGGCCGTGGGGATA+GGG - chr5_2:56971061-56971080 Msa0777680:intron 45.0%
! CCACATTGACTAGAGACACA+TGG + chr5_2:56971437-56971456 None:intergenic 45.0%
CCATGTGTCTCTAGTCAATG+TGG - chr5_2:56971434-56971453 Msa0777680:intron 45.0%
CAAATGTGGCCCTACAAATG+AGG + chr5_2:56971475-56971494 None:intergenic 45.0%
CTCATTTGTAGGGCCACATT+TGG - chr5_2:56971473-56971492 Msa0777680:intron 45.0%
ATTTGTCCCTGCTCCAAATG+TGG + chr5_2:56971489-56971508 None:intergenic 45.0%
! TTTGGAGCAGGGACAAATGT+CGG - chr5_2:56971491-56971510 Msa0777680:intron 45.0%
CAACACATTGTCTCTCACCT+AGG - chr5_2:56971537-56971556 Msa0777680:intron 45.0%
CATTGTCTCTCACCTAGGAT+TGG - chr5_2:56971542-56971561 Msa0777680:intron 45.0%
CACTCTAAACGTCCAATCCT+AGG + chr5_2:56971557-56971576 None:intergenic 45.0%
! AAGCATGGACAGAAGCATGA+TGG - chr5_2:56971782-56971801 Msa0777680:intron 45.0%
TGCCGCAAAACCTAGGAAAT+TGG - chr5_2:56971827-56971846 Msa0777680:intron 45.0%
CTAGGAAACCCCAAATGTCA+TGG + chr5_2:56972272-56972291 None:intergenic 45.0%
! CATGACATTTGGGGTTTCCT+AGG - chr5_2:56972270-56972289 Msa0777680:CDS 45.0%
! TTGATAACTGATTCCGGCCT+AGG + chr5_2:56972290-56972309 None:intergenic 45.0%
AGGCCGGAATCAGTTATCAA+AGG - chr5_2:56972290-56972309 Msa0777680:CDS 45.0%
GGTCAATTAAATTGGGACGG+AGG - chr5_2:56973173-56973192 Msa0777680:intron 45.0%
ATATCACTAGTTGTGCCAGC+TGG - chr5_2:56973631-56973650 Msa0777680:intron 45.0%
GTTGCAATTGTTGGGACTAG+TGG - chr5_2:56973661-56973680 Msa0777680:CDS 45.0%
! ATTGTTGGGACTAGTGGAAG+TGG - chr5_2:56973667-56973686 Msa0777680:CDS 45.0%
!!! TTTTTTCCGCTGCCTATGGT+CGG - chr5_2:56973740-56973759 Msa0777680:intron 45.0%
AAAATTCCGACCATAGGCAG+CGG + chr5_2:56973749-56973768 None:intergenic 45.0%
TGTGATTGGGGTGGCTAAAA+GGG + chr5_2:56973829-56973848 None:intergenic 45.0%
TTGTGATTGGGGTGGCTAAA+AGG + chr5_2:56973830-56973849 None:intergenic 45.0%
! GGCGCAACTTTGTTTGTGAT+TGG + chr5_2:56973843-56973862 None:intergenic 45.0%
CCATTGTGACTGCTAAGACA+CGG - chr5_2:56973954-56973973 Msa0777680:intron 45.0%
!! GACACGGACTAGATATCTGA+TGG - chr5_2:56973970-56973989 Msa0777680:intron 45.0%
!! TGTCATGGATTGCTGCTTTC+CGG + chr5_2:56974935-56974954 None:intergenic 45.0%
TGATAAGGACTTGGGTGTCA+AGG + chr5_2:56975231-56975250 None:intergenic 45.0%
TCCCCACAAGCATGTTGATA+AGG + chr5_2:56975246-56975265 None:intergenic 45.0%
ACATGCTTGTGGGGAAAGAA+AGG - chr5_2:56975251-56975270 Msa0777680:intron 45.0%
AGTATTGCATTAGGGAGGAG+GGG + chr5_2:56975294-56975313 None:intergenic 45.0%
CAGTATTGCATTAGGGAGGA+GGG + chr5_2:56975295-56975314 None:intergenic 45.0%
ACAGTATTGCATTAGGGAGG+AGG + chr5_2:56975296-56975315 None:intergenic 45.0%
GAGCCTGTGAGCAATGAAAA+TGG + chr5_2:56975706-56975725 None:intergenic 45.0%
! GAAGTGCTCTTAGCAAATGC+AGG - chr5_2:56976121-56976140 Msa0777680:intron 45.0%
CAGGAAGATATGCACAGCTT+TGG - chr5_2:56976140-56976159 Msa0777680:intron 45.0%
GGAAGATATGCACAGCTTTG+GGG - chr5_2:56976142-56976161 Msa0777680:intron 45.0%
GTCAGTTGCAAGATCTCTTC+AGG - chr5_2:56976317-56976336 Msa0777680:intron 45.0%
ACTGCTTCCTGTATCACCAC+AGG - chr5_2:56965492-56965511 Msa0777680:three_prime_UTR 50.0%
CACTCAATTCCCACCAGAAG+CGG - chr5_2:56965516-56965535 Msa0777680:three_prime_UTR 50.0%
TAACGGTAACCGCTTCTGGT+GGG + chr5_2:56965528-56965547 None:intergenic 50.0%
ACTGTAACGGTAACCGCTTC+TGG + chr5_2:56965532-56965551 None:intergenic 50.0%
AGCGGTTACCGTTACAGTCA+CGG - chr5_2:56965534-56965553 Msa0777680:three_prime_UTR 50.0%
ACTAAATCACCTCCAGGTGG+TGG - chr5_2:56965726-56965745 Msa0777680:three_prime_UTR 50.0%
TCAGCAATTTGACCACCACC+TGG + chr5_2:56965741-56965760 None:intergenic 50.0%
! CTTGTATTTGAGACCGGAGG+AGG - chr5_2:56966125-56966144 Msa0777680:exon 50.0%
CGTATTGCAGAGAGAGTGAG+AGG - chr5_2:56966188-56966207 Msa0777680:CDS 50.0%
CAAGTCATACGAACAAGCGG+TGG + chr5_2:56966508-56966527 None:intergenic 50.0%
TGGTCTCAGCAAAACATGGG+AGG + chr5_2:56966531-56966550 None:intergenic 50.0%
CAATCACCTCGAGCTTGGTT+CGG - chr5_2:56966656-56966675 Msa0777680:CDS 50.0%
AACTTTCCGAACCAAGCTCG+AGG + chr5_2:56966665-56966684 None:intergenic 50.0%
ATTACCTGAGGTCCACGTAG+AGG + chr5_2:56967632-56967651 None:intergenic 50.0%
AACAACACTAGCATTGCCCG+TGG + chr5_2:56968233-56968252 None:intergenic 50.0%
TCCAATCAACACTGCCATGG+GGG + chr5_2:56968290-56968309 None:intergenic 50.0%
GGATATGGGATTGCACGTTC+TGG - chr5_2:56968307-56968326 Msa0777680:intron 50.0%
ACGAGCTCATGAGCTATCTG+AGG + chr5_2:56968456-56968475 None:intergenic 50.0%
TCAGATAGCTCATGAGCTCG+TGG - chr5_2:56968455-56968474 Msa0777680:intron 50.0%
GAGGAGAATCACAACTAGGG+TGG + chr5_2:56968488-56968507 None:intergenic 50.0%
! AGGGAGTGGTCTCGTCATTT+TGG - chr5_2:56971035-56971054 Msa0777680:intron 50.0%
!!! GATCGAGCCATTTTTGGCTG+TGG - chr5_2:56971253-56971272 Msa0777680:intron 50.0%
TTGGCTGTGGTTGACTACCT+TGG - chr5_2:56971266-56971285 Msa0777680:intron 50.0%
GGGACAAATGTCGGTGGAAA+TGG - chr5_2:56971500-56971519 Msa0777680:intron 50.0%
GATGTCATCCTAGGCGTGAA+GGG + chr5_2:56971760-56971779 None:intergenic 50.0%
AGATGTCATCCTAGGCGTGA+AGG + chr5_2:56971761-56971780 None:intergenic 50.0%
! CATGGACAGAAGCATGATGG+AGG - chr5_2:56971785-56971804 Msa0777680:intron 50.0%
!! AATGAGGTGCCGCAAAACCT+AGG - chr5_2:56971820-56971839 Msa0777680:intron 50.0%
!! AGCTTCCGGGAGTACTTTCA+TGG - chr5_2:56972104-56972123 Msa0777680:intron 50.0%
! ACATTTGGGGTTTCCTAGGC+CGG - chr5_2:56972274-56972293 Msa0777680:CDS 50.0%
AAGAATTACTCCCTCCGTCC+CGG - chr5_2:56972961-56972980 Msa0777680:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr5_2:56972978-56972997 None:intergenic 50.0%
CCGTGTCTTAGCAGTCACAA+TGG + chr5_2:56973957-56973976 None:intergenic 50.0%
AATACTAGAGTCCAACGCCG+TGG - chr5_2:56974440-56974459 Msa0777680:intron 50.0%
CATGTATCAAACCACGGCGT+TGG + chr5_2:56974454-56974473 None:intergenic 50.0%
AGGTACCTCCTCTTCTGTTG+CGG + chr5_2:56974801-56974820 None:intergenic 50.0%
!! GTCATGGATTGCTGCTTTCC+GGG + chr5_2:56974934-56974953 None:intergenic 50.0%
ACGTCCCACACCGAATAGTA+TGG + chr5_2:56975201-56975220 None:intergenic 50.0%
!! TACTATTCGGTGTGGGACGT+TGG - chr5_2:56975201-56975220 Msa0777680:intron 50.0%
CACAACCTACGAGCAAGACA+CGG + chr5_2:56975600-56975619 None:intergenic 50.0%
CTCATCACACTGCATTGCAG+TGG + chr5_2:56975730-56975749 None:intergenic 50.0%
CACTGCAATGCAGTGTGATG+AGG - chr5_2:56975728-56975747 Msa0777680:intron 50.0%
GAAGTTGAGTCGTCTTTCCG+TGG - chr5_2:56976456-56976475 Msa0777680:intron 50.0%
AACGGCGTACCTTGAAGCAG+CGG + chr5_2:56965430-56965449 None:intergenic 55.0%
TGAGTGGCCTGTGGTGATAC+AGG + chr5_2:56965502-56965521 None:intergenic 55.0%
CGCTTCTGGTGGGAATTGAG+TGG + chr5_2:56965518-56965537 None:intergenic 55.0%
GTAACGGTAACCGCTTCTGG+TGG + chr5_2:56965529-56965548 None:intergenic 55.0%
GCAATTTGACCACCACCTGG+AGG + chr5_2:56965738-56965757 None:intergenic 55.0%
ACACACACACACACTCCCTC+CGG + chr5_2:56965988-56966007 None:intergenic 55.0%
AAAAACGGGTGGCTAGAGGC+TGG + chr5_2:56966477-56966496 None:intergenic 55.0%
TCATACGAACAAGCGGTGGG+TGG + chr5_2:56966504-56966523 None:intergenic 55.0%
TACGAGACCATACTCCCCTG+AGG + chr5_2:56966602-56966621 None:intergenic 55.0%
CTGAGGTCCACGTAGAGGTT+TGG + chr5_2:56967627-56967646 None:intergenic 55.0%
CAAACCTCTACGTGGACCTC+AGG - chr5_2:56967625-56967644 Msa0777680:intron 55.0%
!! GGCACTTTTTGCTACCCCCA+TGG - chr5_2:56968273-56968292 Msa0777680:intron 55.0%
!! ACCCCCATGGCAGTGTTGAT+TGG - chr5_2:56968286-56968305 Msa0777680:intron 55.0%
GAGGAAGGGATTAGAGGGAG+TGG - chr5_2:56971021-56971040 Msa0777680:intron 55.0%
TCTGCAGTTCCCTATCCCCA+CGG + chr5_2:56971073-56971092 None:intergenic 55.0%
! TGTAGGGCCACATTTGGAGC+AGG - chr5_2:56971479-56971498 Msa0777680:intron 55.0%
! GTAGGGCCACATTTGGAGCA+GGG - chr5_2:56971480-56971499 Msa0777680:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr5_2:56972974-56972993 None:intergenic 55.0%
CCTCTTCTGTTGCGGAAAGC+CGG + chr5_2:56974793-56974812 None:intergenic 55.0%
GCTTTCCGCAACAGAAGAGG+AGG - chr5_2:56974793-56974812 Msa0777680:intron 55.0%
TACAGGTCTATGAAGCCGCC+CGG - chr5_2:56974913-56974932 Msa0777680:intron 55.0%
!! ATGGATTGCTGCTTTCCGGG+CGG + chr5_2:56974931-56974950 None:intergenic 55.0%
TCCACTGTTGTGGGAGAACG+AGG - chr5_2:56974981-56975000 Msa0777680:intron 55.0%
CCACTGTTGTGGGAGAACGA+GGG - chr5_2:56974982-56975001 Msa0777680:intron 55.0%
TGTGGGAGAACGAGGGCTAA+AGG - chr5_2:56974989-56975008 Msa0777680:intron 55.0%
AACTGCCGTGTCTTGCTCGT+AGG - chr5_2:56975592-56975611 Msa0777680:intron 55.0%
TACGCCGTTCCCACCACTTC+CGG - chr5_2:56965441-56965460 Msa0777680:three_prime_UTR 60.0%
! ACTGCCGGAAGTGGTGGGAA+CGG + chr5_2:56965448-56965467 None:intergenic 60.0%
TTGCCACTGCCGGAAGTGGT+GGG + chr5_2:56965453-56965472 None:intergenic 60.0%
ATTGCCACTGCCGGAAGTGG+TGG + chr5_2:56965454-56965473 None:intergenic 60.0%
ACGATTGCCACTGCCGGAAG+TGG + chr5_2:56965457-56965476 None:intergenic 60.0%
GGTGGGAATTGAGTGGCCTG+TGG + chr5_2:56965511-56965530 None:intergenic 60.0%
! GGAGGGAGTGTGTGTGTGTG+TGG - chr5_2:56965987-56966006 Msa0777680:three_prime_UTR 60.0%
CGGCAAAAACGGGTGGCTAG+AGG + chr5_2:56966481-56966500 None:intergenic 60.0%
TACGAACAAGCGGTGGGTGG+CGG + chr5_2:56966501-56966520 None:intergenic 60.0%
CCATACTCCCCTGAGGCAGA+AGG + chr5_2:56966595-56966614 None:intergenic 60.0%
CCTTCTGCCTCAGGGGAGTA+TGG - chr5_2:56966592-56966611 Msa0777680:intron 60.0%
GGAGCAGGGACAAATGTCGG+TGG - chr5_2:56971494-56971513 Msa0777680:intron 60.0%
GTCATCCTAGGCGTGAAGGG+CGG + chr5_2:56971757-56971776 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr5_2:56972975-56972994 None:intergenic 60.0%
CCGGCTTTCCGCAACAGAAG+AGG - chr5_2:56974790-56974809 Msa0777680:intron 60.0%
CCCTCGTTCTCCCACAACAG+TGG + chr5_2:56974985-56975004 None:intergenic 60.0%
GTTCCCACCACTTCCGGCAG+TGG - chr5_2:56965447-56965466 Msa0777680:three_prime_UTR 65.0%
CCGGACACGATTGCCACTGC+CGG + chr5_2:56965463-56965482 None:intergenic 65.0%
CCGGCAGTGGCAATCGTGTC+CGG - chr5_2:56965460-56965479 Msa0777680:three_prime_UTR 65.0%
! TGGGTGGCGGCAAAAACGGG+TGG + chr5_2:56966488-56966507 None:intergenic 65.0%
! CGGTGGGTGGCGGCAAAAAC+GGG + chr5_2:56966491-56966510 None:intergenic 65.0%
! GCGGTGGGTGGCGGCAAAAA+CGG + chr5_2:56966492-56966511 None:intergenic 65.0%
CATAGCCGCCCTTCACGCCT+AGG - chr5_2:56971749-56971768 Msa0777680:intron 65.0%
TTAGGGAGGAGGGGACCCAG+AGG + chr5_2:56975285-56975304 None:intergenic 65.0%
GGTGGCTAGAGGCTGGCGTG+TGG + chr5_2:56966470-56966489 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 56965420 56976927 56965420 ID=Msa0777680;Name=Msa0777680
chr5_2 mRNA 56965420 56976927 56965420 ID=Msa0777680-mRNA-1;Parent=Msa0777680;Name=Msa0777680-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.94|0.94|1|1|1|19|708|707
chr5_2 exon 56965420 56966271 56965420 ID=Msa0777680-mRNA-1:exon:16852;Parent=Msa0777680-mRNA-1
chr5_2 exon 56966598 56966733 56966598 ID=Msa0777680-mRNA-1:exon:16851;Parent=Msa0777680-mRNA-1
chr5_2 exon 56966908 56966972 56966908 ID=Msa0777680-mRNA-1:exon:16850;Parent=Msa0777680-mRNA-1
chr5_2 exon 56967337 56967429 56967337 ID=Msa0777680-mRNA-1:exon:16849;Parent=Msa0777680-mRNA-1
chr5_2 exon 56967533 56967598 56967533 ID=Msa0777680-mRNA-1:exon:16848;Parent=Msa0777680-mRNA-1
chr5_2 exon 56967688 56967768 56967688 ID=Msa0777680-mRNA-1:exon:16847;Parent=Msa0777680-mRNA-1
chr5_2 exon 56968089 56968144 56968089 ID=Msa0777680-mRNA-1:exon:16846;Parent=Msa0777680-mRNA-1
chr5_2 exon 56968659 56968747 56968659 ID=Msa0777680-mRNA-1:exon:16845;Parent=Msa0777680-mRNA-1
chr5_2 exon 56969744 56969829 56969744 ID=Msa0777680-mRNA-1:exon:16844;Parent=Msa0777680-mRNA-1
chr5_2 exon 56971575 56971691 56971575 ID=Msa0777680-mRNA-1:exon:16843;Parent=Msa0777680-mRNA-1
chr5_2 exon 56971947 56972092 56971947 ID=Msa0777680-mRNA-1:exon:16842;Parent=Msa0777680-mRNA-1
chr5_2 exon 56972267 56972327 56972267 ID=Msa0777680-mRNA-1:exon:16841;Parent=Msa0777680-mRNA-1
chr5_2 exon 56972440 56972523 56972440 ID=Msa0777680-mRNA-1:exon:16840;Parent=Msa0777680-mRNA-1
chr5_2 exon 56972744 56972851 56972744 ID=Msa0777680-mRNA-1:exon:16839;Parent=Msa0777680-mRNA-1
chr5_2 exon 56973042 56973144 56973042 ID=Msa0777680-mRNA-1:exon:16838;Parent=Msa0777680-mRNA-1
chr5_2 exon 56973413 56973456 56973413 ID=Msa0777680-mRNA-1:exon:16837;Parent=Msa0777680-mRNA-1
chr5_2 exon 56973658 56973719 56973658 ID=Msa0777680-mRNA-1:exon:16836;Parent=Msa0777680-mRNA-1
chr5_2 exon 56974001 56974175 56974001 ID=Msa0777680-mRNA-1:exon:16835;Parent=Msa0777680-mRNA-1
chr5_2 exon 56976520 56976927 56976520 ID=Msa0777680-mRNA-1:exon:16834;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56976520 56976927 56976520 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56974001 56974175 56974001 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56973658 56973719 56973658 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56973413 56973456 56973413 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56973042 56973144 56973042 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56972744 56972851 56972744 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56972440 56972523 56972440 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56972267 56972327 56972267 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56971947 56972092 56971947 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56971575 56971691 56971575 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56969744 56969829 56969744 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56968659 56968747 56968659 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56968089 56968144 56968089 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56967688 56967768 56967688 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56967533 56967598 56967533 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56967337 56967429 56967337 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56966908 56966972 56966908 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56966598 56966733 56966598 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 CDS 56966128 56966271 56966128 ID=Msa0777680-mRNA-1:cds;Parent=Msa0777680-mRNA-1
chr5_2 three_prime_UTR 56965420 56966127 56965420 ID=Msa0777680-mRNA-1:three_prime_utr;Parent=Msa0777680-mRNA-1
Gene Sequence

>Msa0777680

ATGATTGCCGCTGCTTCAAGGTACGCCGTTCCCACCACTTCCGGCAGTGGCAATCGTGTCCGGTCGCTTTTAACTGCTTCCTGTATCACCACAGGCCACTCAATTCCCACCAGAAGCGGTTACCGTTACAGTCACGGTAACAGAATTAGTTTCAATAACCGTCAACTCAAACCATGTCCAATTTCAATTTTCTCTATAAAATGCTTTCTCTCCAATTCATCATCATCATCATCATCCTCAAATAGTAGAGCTTCGTTTTCAACTGATGATGGAAGTCTCAAGAATCAAAAAACTGCATCTACCATCACTAAATCACCTCCAGGTGGTGGTCAAATTGCTGATATCAAGATCCTTAAATCCCTTATTAGTTACCTTTGGATGAAAGATAATCTTGAATTTCAGCTTCGGGTTTTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGGAGTTGATTGGTTGAATACTGCCACGGGCAATGCTAGTGTTGTTGCTTCGAATCCTACTATGATGGCACTTTTTGCTACCCCCATGGCAGTGTTGATTGGATATGGGATTGCACGTTCTGGAGCTTCTGCTTTCAATGAACTGCGGAATGCTTTGTTTTCTAAGGTAGCACTACGGACAATTCGTTTAGTTTCAAGGAAGGTCTTTTCACATTTGCATGACCTTGACCTTCGATATCATCTAAGTCGAGAAACTGGTGCATTAAGTCGAACAATTGATCGTGGTAGCGGAGCAATAAATTTTATTCTCTCCTCTACGTTGTTCAACATAGTACCTACCATATTAGAGATATCTATGGTATCAGGTATTCTGGCCTACAAATATGGAGCACCTTTTGCGTGGATTACTTCCCTGTCAGTTGCTGCATATATTGGTTTTACACTTTCTATCACACAGTGGAGGACTAAATTCAGGAAAGCCATGAATAAGGCTGATAATGACGCTAGTACTAGGGCTATTGATTCACTTATTAATTATGAGACGGTCAAATATTTCAATAATGAAGTTCACGAAACTGATCATTATGACATGTACCTAAAGAGGTATGAGGATGCTGCCCAGAAAAGCGAACAGAGTCTTGCTTTGTTGAACTTTGGTCAAACCGCTATATTTAGTACTGCTCTTTCAACAGCAATGGTTTTGTGTTCTCATGGGATCATGAATGGCAGAATGACTGTTGGTGATTTGGTGATGGTAAATGGGCTTCTCTTCCAACTATCTCTTCCACTCTATTTCCTTGGTGGTGTTTATCGTGCAACTATACAAAGCCTAATCGACATGAAAGCCATGTTTCAGTTACTTGAGGAAAAAGCAGACATTAAGGATAAAGAAAATGCAAAGCCTCTAAGGTTTAATGGGGGAAAAATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGAATATCACTAGTTGTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCCTTCTCAGAATGCTATTCAGATTTTTTGATCCCCATTCTGGAAGTATAAAGATAGATGATCAAGATATTCGGGATGTATCCCTTGAGAGTTTACGGAAGTCTATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACGATATTTCATAACATTCACTATGGCCGGCTTTCCGCAACAGAAGAGGAGGTCTATGAAGCCGCCCGGAAAGCAGCAATCCATGACACTATCACGAGTTTTCCTGAAAAATACTCCACTGTTGTGGGAGAACGAGGGCTAAAGTTAAGTGGTGGTGAGAAACAACGTGTTTCCCTTGCTCGAGCATTCTTAAAATCACCTGCAATACTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCAGTATCAACGAATCGAACTTCCATTTTCATTGCTCACAGGCTCACCACTGCAATGCAGTGTGATGAGATCATTGTTTTGGAAAATGGAAAGATGGTTGAGCATGGACCACATGAAGTGCTCTTAGCAAATGCAGGAAGATATGCACAGCTTTGGGGACAGCAAAATAACACTATTGATGCAATTGATACAGCCATCAAAGTGGGAGCATAA
Protein sequence

>Msa0777680

MIAAASRYAVPTTSGSGNRVRSLLTASCITTGHSIPTRSGYRYSHGNRISFNNRQLKPCPISIFSIKCFLSNSSSSSSSSNSRASFSTDDGSLKNQKTASTITKSPPGGGQIADIKILKSLISYLWMKDNLEFQLRVLNVQVPFLFKLGVDWLNTATGNASVVASNPTMMALFATPMAVLIGYGIARSGASAFNELRNALFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRTIDRGSGAINFILSSTLFNIVPTILEISMVSGILAYKYGAPFAWITSLSVAAYIGFTLSITQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNEVHETDHYDMYLKRYEDAAQKSEQSLALLNFGQTAIFSTALSTAMVLCSHGIMNGRMTVGDLVMVNGLLFQLSLPLYFLGGVYRATIQSLIDMKAMFQLLEEKADIKDKENAKPLRFNGGKIQFENVHFSYLTERKILDGISLVVPAGKSVAIVGTSGSGKSTLLRMLFRFFDPHSGSIKIDDQDIRDVSLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAARKAAIHDTITSFPEKYSTVVGERGLKLSGGEKQRVSLARAFLKSPAILLCDEATSALDSTTEAEILSALKSVSTNRTSIFIAHRLTTAMQCDEIIVLENGKMVEHGPHEVLLANAGRYAQLWGQQNNTIDAIDTAIKVGA*