AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0830830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0830830 MtrunA17_Chr5g0396951 99.013 304 3 0 1 304 1 304 0.0 625
Msa0830830 MtrunA17_Chr4g0049381 71.803 305 84 2 1 304 1 304 1.49e-165 462
Msa0830830 MtrunA17_Chr7g0275331 69.836 305 90 2 1 304 1 304 2.49e-165 462
Msa0830830 MtrunA17_Chr2g0298101 67.241 290 93 1 17 304 14 303 9.33e-153 430
Msa0830830 MtrunA17_Chr6g0449291 54.138 290 130 3 15 304 3 289 3.16e-115 334
Msa0830830 MtrunA17_Chr4g0000451 65.882 170 56 1 137 304 6 175 4.18e-80 241
Msa0830830 MtrunA17_Chr4g0000441 68.421 114 36 0 22 135 33 146 1.72e-55 177
Msa0830830 MtrunA17_Chr5g0404381 33.218 289 174 7 15 301 41 312 4.54e-43 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0830830 AT4G23730.1 69.608 306 91 2 1 304 1 306 1.17e-165 462
Msa0830830 AT3G61610.1 74.483 290 73 1 16 304 15 304 6.78e-165 461
Msa0830830 AT3G61610.2 74.483 290 73 1 16 304 9 298 7.51e-165 461
Msa0830830 AT4G23730.3 68.269 312 91 3 1 304 1 312 6.02e-163 456
Msa0830830 AT4G23730.2 73.881 268 68 2 39 304 4 271 1.66e-154 433
Msa0830830 AT5G57330.1 67.698 291 92 1 16 304 9 299 2.90e-154 434
Msa0830830 AT3G01590.1 60.000 285 112 2 20 304 8 290 6.35e-130 372
Msa0830830 AT3G01590.2 60.000 285 112 2 20 304 8 290 6.35e-130 372
Msa0830830 AT5G14500.1 57.586 290 121 2 15 304 3 290 8.63e-130 372
Msa0830830 AT5G14500.2 53.016 315 121 3 15 304 3 315 1.41e-123 357
Msa0830830 AT4G25900.1 51.042 288 136 2 16 303 32 314 4.78e-112 327
Msa0830830 AT5G66530.4 34.021 291 171 9 13 300 6 278 1.41e-44 153
Msa0830830 AT5G66530.1 34.021 291 171 9 13 300 34 306 3.06e-44 153
Msa0830830 AT5G66530.2 34.021 291 171 9 13 300 34 306 3.06e-44 153
Msa0830830 AT5G66530.3 34.021 291 171 9 13 300 34 306 3.06e-44 153

Find 137 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAGTCAATAGTGGATTT+TGG 0.129984 5_4:-3844072 Msa0830830:CDS
CTCTTTGTATCTCTTGATTT+TGG 0.153081 5_4:-3846317 Msa0830830:five_prime_UTR
AACCTTAATAAAGCTTTAAA+TGG 0.190531 5_4:+3846907 None:intergenic
GATTATGGACCTTTCATTTC+AGG 0.210499 5_4:+3846944 None:intergenic
ATTCCTCCTCGTACTGGTTT+TGG 0.222742 5_4:+3845461 None:intergenic
GTCAACTGGGTCGTTTATTC+TGG 0.237336 5_4:-3846811 Msa0830830:five_prime_UTR
GACAGTGAAGTGAGGGTAGA+AGG 0.250795 5_4:-3844555 Msa0830830:intron
ACAAAATATTGAGGATAAAA+TGG 0.260033 5_4:+3846468 None:intergenic
CTCCATTTAAAGCTTTATTA+AGG 0.263109 5_4:-3846909 Msa0830830:five_prime_UTR
GAGGAAGACTTGGTGGATTA+TGG 0.293107 5_4:+3846929 None:intergenic
GTTGTAGTTAACTTTATAAA+AGG 0.296743 5_4:-3843643 Msa0830830:three_prime_UTR
CACATATAGTTGGAAGAAAT+TGG 0.297432 5_4:-3846253 Msa0830830:five_prime_UTR
TAATCTGTAAACCGTTAGTT+AGG 0.313002 5_4:+3847028 None:intergenic
GCCTGCTACCACTGTTGTGC+TGG 0.326166 5_4:+3846975 None:intergenic
CAACTTTGATGTGACAGAAT+TGG 0.327754 5_4:+3846146 None:intergenic
AAACAATAACCAATGCTTGA+TGG 0.340522 5_4:+3843882 None:intergenic
TACAACTCTGAATTGTCAAC+TGG 0.351270 5_4:-3846825 Msa0830830:five_prime_UTR
GATTTGCAAGGAATAAGATA+TGG 0.355587 5_4:-3845291 Msa0830830:CDS
AAAGGAGTATTTGTAGGAGT+TGG 0.357575 5_4:+3843592 None:intergenic
TTCATATTAAATTCCACAAT+AGG 0.357582 5_4:-3846735 Msa0830830:five_prime_UTR
TAATATGAAAATTGTTACTT+TGG 0.362563 5_4:+3846749 None:intergenic
CAGATAATAACTGAATTATT+AGG 0.363282 5_4:-3846364 Msa0830830:five_prime_UTR
TTACACATTGAATAGTTGTT+TGG 0.364398 5_4:-3844113 Msa0830830:intron
ACGGAGGGCAAGTTCTTTCA+TGG 0.380303 5_4:-3845771 Msa0830830:CDS
AAGGCTTGCCATTGACATTC+CGG 0.382320 5_4:+3844802 None:intergenic
TACGGACCTGATATCTGATA+TGG 0.394110 5_4:+3844746 None:intergenic
TAAATTTGAATTGAATGGTT+TGG 0.395726 5_4:+3846702 None:intergenic
TGAAGCGTTCCTTCTGGTAT+AGG 0.403091 5_4:+3844505 None:intergenic
ATATGAAAATCTAATTGAAA+AGG 0.404528 5_4:+3846406 None:intergenic
CTGAAGACGATATGAAGATA+TGG 0.407969 5_4:-3845192 Msa0830830:CDS
CGGCCGGTCCATTCTTCTCC+CGG 0.408566 5_4:+3843982 None:intergenic
TGTGTTAAATTTGAATTGAA+TGG 0.410209 5_4:+3846697 None:intergenic
GTTCTGTGAAGCGTTCCTTC+TGG 0.411774 5_4:+3844499 None:intergenic
TTATCTCGATTCTAGCAGTA+TGG 0.412644 5_4:-3844328 Msa0830830:CDS
TGAAGTGAGGGTAGAAGGGT+TGG 0.418375 5_4:-3844550 Msa0830830:CDS
ATTACCTGTGGAAAACAGAT+TGG 0.421320 5_4:+3845437 None:intergenic
GAAAGACACTTACCAACATC+TGG 0.431173 5_4:+3844249 None:intergenic
AAGGAGTATTTGTAGGAGTT+GGG 0.433989 5_4:+3843593 None:intergenic
ATTTCTCCATATCAGATATC+AGG 0.439981 5_4:-3844752 Msa0830830:intron
CAAGACAAAGGAGTATTTGT+AGG 0.445320 5_4:+3843586 None:intergenic
GTTTCGCCTAAGGGTCTGTT+TGG 0.445507 5_4:-3844859 Msa0830830:CDS
CAATTCTGTCACATCAAAGT+TGG 0.449100 5_4:-3846145 Msa0830830:five_prime_UTR
TGTTTCTAAATTCTAAGTAA+TGG 0.450840 5_4:+3846081 None:intergenic
ACTTTGAGAGTAACAATTCA+AGG 0.452042 5_4:+3846025 None:intergenic
ATTTCTAGATCACATATAGT+TGG 0.454310 5_4:-3846263 Msa0830830:five_prime_UTR
GAATAGTTGTTTGGAATCCC+TGG 0.459977 5_4:-3844104 Msa0830830:intron
CCATTTGAATCCGTGGGCAG+TGG 0.460101 5_4:+3845247 None:intergenic
AGAAGAATGGACCGGCCGCT+TGG 0.461091 5_4:-3843977 Msa0830830:CDS
GTTGTTCTTCGAAACGTTCG+AGG 0.461265 5_4:-3845913 Msa0830830:CDS
AAATCCGATAACCTTAAAAC+CGG 0.461715 5_4:-3844001 Msa0830830:CDS
AATGCAAAGCATACATAAAG+AGG 0.463360 5_4:+3843699 None:intergenic
CCTTAAAACCGGGAGAAGAA+TGG 0.474210 5_4:-3843990 Msa0830830:CDS
TTACCTGTGGAAAACAGATT+GGG 0.476013 5_4:+3845438 None:intergenic
ATTGGGATTCCTCCTCGTAC+TGG 0.478898 5_4:+3845455 None:intergenic
AACATCAGTTGAAGTTATCA+AGG 0.479030 5_4:-3845956 Msa0830830:CDS
GAATCCGTGGGCAGTGGTGG+AGG 0.481987 5_4:+3845253 None:intergenic
TTGAAGTCAAGTCAAGTAGA+AGG 0.484710 5_4:+3843940 None:intergenic
CAGCTTCGAGTTTCGCCTAA+GGG 0.487911 5_4:-3844868 Msa0830830:CDS
TCAGCTTCGAGTTTCGCCTA+AGG 0.489943 5_4:-3844869 Msa0830830:intron
AATCTGTAAACCGTTAGTTA+GGG 0.490789 5_4:+3847029 None:intergenic
GCTTTAAATGGAGGAAGACT+TGG 0.491945 5_4:+3846919 None:intergenic
ACAGTGAAGTGAGGGTAGAA+GGG 0.492013 5_4:-3844554 Msa0830830:intron
CCTTCTGGTATAGGTTATCC+AGG 0.493007 5_4:+3844514 None:intergenic
TCGTGAAGATTGAAAATGAA+AGG 0.494067 5_4:+3846230 None:intergenic
TGCTTTAACATTTGAATCTG+AGG 0.495159 5_4:-3844469 Msa0830830:intron
GGGGTCATACAACACTCAAA+AGG 0.495972 5_4:+3847049 None:intergenic
TATGAAAATCTAATTGAAAA+GGG 0.498751 5_4:+3846407 None:intergenic
TTAAATGGAGGAAGACTTGG+TGG 0.503443 5_4:+3846922 None:intergenic
ACATATTAGTGATGTATATG+AGG 0.506124 5_4:-3843764 Msa0830830:three_prime_UTR
GTTATTGTTCACTAGTACCA+AGG 0.506527 5_4:-3845728 Msa0830830:intron
TGAATATGATATCTCGCATC+CGG 0.512657 5_4:-3844821 Msa0830830:CDS
ATTTGCAAGGAATAAGATAT+GGG 0.514716 5_4:-3845290 Msa0830830:CDS
CCCAGCACAACAGTGGTAGC+AGG 0.515068 5_4:-3846976 Msa0830830:five_prime_UTR
TCTCGCATCCGGAATGTCAA+TGG 0.518066 5_4:-3844810 Msa0830830:CDS
TTCAGGTTAGCTTGCACGGA+GGG 0.519016 5_4:-3845786 Msa0830830:intron
TTTGAATCCGTGGGCAGTGG+TGG 0.520143 5_4:+3845250 None:intergenic
CCTGCTACCACTGTTGTGCT+GGG 0.521769 5_4:+3846976 None:intergenic
TGGACTTTCAACGCCTATTG+TGG 0.522765 5_4:+3846722 None:intergenic
ACAATTTCATCTACATGACT+TGG 0.525178 5_4:+3843664 None:intergenic
AATAGTTGTTTGGAATCCCT+GGG 0.525696 5_4:-3844103 Msa0830830:intron
CCACTGCCCACGGATTCAAA+TGG 0.526642 5_4:-3845247 Msa0830830:CDS
TTGTCACAAGAAAGTTGTCA+TGG 0.526878 5_4:-3846196 Msa0830830:five_prime_UTR
CTTAATAAAGCTTTAAATGG+AGG 0.530126 5_4:+3846910 None:intergenic
GGGTCATACAACACTCAAAA+GGG 0.530920 5_4:+3847050 None:intergenic
CATGTTGCTCTAGTGTTCCA+CGG 0.532159 5_4:+3845314 None:intergenic
AAACAGTCACATAATAATGA+AGG 0.533995 5_4:+3846585 None:intergenic
CCTTTCATTTCAGGTCAACA+AGG 0.535521 5_4:+3846953 None:intergenic
ATAAATAAACCATCAAGCAT+TGG 0.537410 5_4:-3843891 Msa0830830:three_prime_UTR
TTTCTTCTCATGATCTAGAA+CGG 0.537918 5_4:+3844302 None:intergenic
ATCTTCATATCGTCTTCAGA+TGG 0.538140 5_4:+3845196 None:intergenic
AGGGTCTGTTTGGCAGCAGA+TGG 0.540406 5_4:-3844849 Msa0830830:CDS
AACAGAAAGCTCCAAGCGGC+CGG 0.541122 5_4:+3843966 None:intergenic
TGCGTGGATGGTGCAGCAGT+TGG 0.542462 5_4:-3844024 Msa0830830:CDS
GTTGGAGACTCTTGACTACC+TGG 0.542710 5_4:-3844532 Msa0830830:CDS
TACTTAGAATTTAGAAACAC+AGG 0.545071 5_4:-3846077 Msa0830830:five_prime_UTR
AAGCAAATGCTCTGCGTGGA+TGG 0.557893 5_4:-3844036 Msa0830830:CDS
ATGTGTATATACTTGAAAAG+TGG 0.559564 5_4:+3843783 None:intergenic
AACTGAATTATTAGGCCTAA+CGG 0.567176 5_4:-3846356 Msa0830830:five_prime_UTR
GATCAATAACTAAGCGGCAA+AGG 0.568982 5_4:+3846661 None:intergenic
GAAATATGTATGAAATGCAA+AGG 0.575295 5_4:+3844770 None:intergenic
GAATCAAGAACAAAATATTG+AGG 0.576370 5_4:+3846459 None:intergenic
TGTCACAAGAAAGTTGTCAT+GGG 0.578918 5_4:-3846195 Msa0830830:five_prime_UTR
GATCTTTCAAACCCTTAAAG+CGG 0.583628 5_4:+3846849 None:intergenic
AAGGAAGGTCTTCCAGATGT+TGG 0.585878 5_4:-3844261 Msa0830830:intron
CTGCTGCCAAACAGACCCTT+AGG 0.589405 5_4:+3844853 None:intergenic
CGATTATTGACAGTGAAGTG+AGG 0.590022 5_4:-3844563 Msa0830830:intron
AAATCCTCCACCACTGCCCA+CGG 0.590093 5_4:-3845257 Msa0830830:CDS
AAGGAACGCTTCACAGAACA+AGG 0.595906 5_4:-3844495 Msa0830830:CDS
AAACCGGGAGAAGAATGGAC+CGG 0.609197 5_4:-3843985 Msa0830830:CDS
CCTTGTTGACCTGAAATGAA+AGG 0.609996 5_4:-3846953 Msa0830830:five_prime_UTR
TGAGCAATATCAATAAGAAG+AGG 0.610630 5_4:-3843831 Msa0830830:three_prime_UTR
GTTGTATGACCCCTAACTAA+CGG 0.618883 5_4:-3847039 Msa0830830:five_prime_UTR
ACTGTTGTGCTGGGATTGAG+AGG 0.624297 5_4:+3846985 None:intergenic
AATGCAAAGGAGAAACTGAA+AGG 0.627775 5_4:+3844783 None:intergenic
GATTATTGACAGTGAAGTGA+GGG 0.633522 5_4:-3844562 Msa0830830:intron
ACGAACATTTGTGATACGAA+AGG 0.635723 5_4:-3844280 Msa0830830:CDS
ATATGAAGATATGGCCACAT+AGG 0.635993 5_4:-3845183 Msa0830830:intron
CCTGGATAACCTATACCAGA+AGG 0.640312 5_4:-3844514 Msa0830830:CDS
ATCTGTAAACCGTTAGTTAG+GGG 0.642974 5_4:+3847030 None:intergenic
CGTGGAACACTAGAGCAACA+TGG 0.643884 5_4:-3845313 Msa0830830:CDS
TAAAGCGTGTCGCACCTATG+TGG 0.645929 5_4:+3845169 None:intergenic
ATATGTGATCAATAACTAAG+CGG 0.652155 5_4:+3846655 None:intergenic
TAGAGCAACATGGATTTGCA+AGG 0.656362 5_4:-3845303 Msa0830830:CDS
TTTCAGGTTAGCTTGCACGG+AGG 0.662583 5_4:-3845787 Msa0830830:intron
TCTCAATCCCAGCACAACAG+TGG 0.662845 5_4:-3846983 Msa0830830:five_prime_UTR
ACATTTGTGATACGAAAGGA+AGG 0.663497 5_4:-3844276 Msa0830830:CDS
CGTTCGAGGAGCTTCAGCAA+CGG 0.664112 5_4:-3845899 Msa0830830:intron
CTTTCATGGAAAACAGAACG+CGG 0.670837 5_4:-3845757 Msa0830830:CDS
TTGTGCTGGGATTGAGAGGG+AGG 0.672378 5_4:+3846989 None:intergenic
ACAACTCTGAATTGTCAACT+GGG 0.674618 5_4:-3846824 Msa0830830:five_prime_UTR
TGCGAGATATCATATTCAGA+CGG 0.674803 5_4:+3844826 None:intergenic
AATCCGATAACCTTAAAACC+GGG 0.679316 5_4:-3844000 Msa0830830:CDS
GTACAAGCAAATGCTCTGCG+TGG 0.681422 5_4:-3844040 Msa0830830:CDS
CTGTTGTGCTGGGATTGAGA+GGG 0.705035 5_4:+3846986 None:intergenic
CCTCCAAAACCAGTACGAGG+AGG 0.735431 5_4:-3845464 Msa0830830:CDS
GTACAACAGAAAGCTCCAAG+CGG 0.740861 5_4:+3843962 None:intergenic
ACTCCTCCAAAACCAGTACG+AGG 0.754632 5_4:-3845467 Msa0830830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTCTTTTTTATTTTAATA+TGG + chr5_4:3844130-3844149 None:intergenic 10.0%
!!! AAATATACTTGTTATTATAT+AGG + chr5_4:3845701-3845720 None:intergenic 10.0%
!! TTTATAAAATTTAAAAACGA+AGG + chr5_4:3846020-3846039 None:intergenic 10.0%
!!! AATTTAACTTGATAAATATA+AGG + chr5_4:3846239-3846258 None:intergenic 10.0%
!!! TAATATGAAAATTGTTACTT+TGG + chr5_4:3843904-3843923 None:intergenic 15.0%
!!! CTTTTTTATTTTAATATGGA+CGG + chr5_4:3844126-3844145 None:intergenic 15.0%
!! TATGAAAATCTAATTGAAAA+GGG + chr5_4:3844246-3844265 None:intergenic 15.0%
!! ATATGAAAATCTAATTGAAA+AGG + chr5_4:3844247-3844266 None:intergenic 15.0%
!!! TACAAAGAGTTATATATTTT+TGG + chr5_4:3844322-3844341 None:intergenic 15.0%
!!! ACATTTTACAAACAAAATTA+AGG + chr5_4:3845116-3845135 None:intergenic 15.0%
!! ATATAGATAGATAGATAATA+AGG - chr5_4:3845282-3845301 Msa0830830:CDS 15.0%
!!! AACCTTAATAAAGCTTTAAA+TGG + chr5_4:3843746-3843765 None:intergenic 20.0%
!! TTCATATTAAATTCCACAAT+AGG - chr5_4:3843915-3843934 Msa0830830:three_prime_UTR 20.0%
!! TAAATTTGAATTGAATGGTT+TGG + chr5_4:3843951-3843970 None:intergenic 20.0%
!! TGTGTTAAATTTGAATTGAA+TGG + chr5_4:3843956-3843975 None:intergenic 20.0%
!! TTCAAAAAAGAAAACAATGA+AGG + chr5_4:3844034-3844053 None:intergenic 20.0%
!!! TTTTGAAGAATTAATGAGAT+GGG + chr5_4:3844102-3844121 None:intergenic 20.0%
!!! ATTTTGAAGAATTAATGAGA+TGG + chr5_4:3844103-3844122 None:intergenic 20.0%
!! ACAAAATATTGAGGATAAAA+TGG + chr5_4:3844185-3844204 None:intergenic 20.0%
!! CAGATAATAACTGAATTATT+AGG - chr5_4:3844286-3844305 Msa0830830:CDS 20.0%
!!! ATAACTGATAAATCAGTTTT+TGG - chr5_4:3844543-3844562 Msa0830830:CDS 20.0%
!!! TGTTTCTAAATTCTAAGTAA+TGG + chr5_4:3844572-3844591 None:intergenic 20.0%
!! CAAACAAAATTAAGGTTAAT+TGG + chr5_4:3845108-3845127 None:intergenic 20.0%
!! TATATAGATTTCTGTAATTC+AGG + chr5_4:3845267-3845286 None:intergenic 20.0%
!!! AGCATTTTACTTATGAATTT+GGG - chr5_4:3845532-3845551 Msa0830830:intron 20.0%
!! GCTATATATAGAACTATTAA+AGG - chr5_4:3845588-3845607 Msa0830830:intron 20.0%
!!! CAAGATCAATTATTTTATCA+AGG - chr5_4:3845955-3845974 Msa0830830:CDS 20.0%
!! TAACTTGATAAATATAAGGA+TGG + chr5_4:3846235-3846254 None:intergenic 20.0%
!! CAAAATCTAAGTACTATAAT+TGG - chr5_4:3846450-3846469 Msa0830830:five_prime_UTR 20.0%
!! GTTGTAGTTAACTTTATAAA+AGG - chr5_4:3847007-3847026 Msa0830830:five_prime_UTR 20.0%
!! AAAAAAAAGAAAGATTTGAC+AGG - chr5_4:3847032-3847051 Msa0830830:five_prime_UTR 20.0%
!!! CTTAATAAAGCTTTAAATGG+AGG + chr5_4:3843743-3843762 None:intergenic 25.0%
!!! CTCCATTTAAAGCTTTATTA+AGG - chr5_4:3843741-3843760 Msa0830830:three_prime_UTR 25.0%
!! TAACTTTTAAACCGCTTTAA+GGG - chr5_4:3843790-3843809 Msa0830830:three_prime_UTR 25.0%
! ATATGTGATCAATAACTAAG+CGG + chr5_4:3843998-3844017 None:intergenic 25.0%
! AAACAGTCACATAATAATGA+AGG + chr5_4:3844068-3844087 None:intergenic 25.0%
!!! TTGTCGATTTTTTGTAATTG+AGG + chr5_4:3844158-3844177 None:intergenic 25.0%
! GAATCAAGAACAAAATATTG+AGG + chr5_4:3844194-3844213 None:intergenic 25.0%
!! ATTTCTAGATCACATATAGT+TGG - chr5_4:3844387-3844406 Msa0830830:intron 25.0%
! TACTTAGAATTTAGAAACAC+AGG - chr5_4:3844573-3844592 Msa0830830:intron 25.0%
!!! TTTTTTGAGATGAATCATTC+TGG - chr5_4:3844650-3844669 Msa0830830:intron 25.0%
! AGATAGATAGATAATAAGGT+TGG - chr5_4:3845286-3845305 Msa0830830:CDS 25.0%
!!! TGGTGTGATTTATTTTAGTT+TGG - chr5_4:3845310-3845329 Msa0830830:CDS 25.0%
! ATTTGCAAGGAATAAGATAT+GGG - chr5_4:3845360-3845379 Msa0830830:intron 25.0%
! CAAATTCATAAGTAAAATGC+TGG + chr5_4:3845533-3845552 None:intergenic 25.0%
!! CAGCATTTTACTTATGAATT+TGG - chr5_4:3845531-3845550 Msa0830830:intron 25.0%
!! GCATTTTACTTATGAATTTG+GGG - chr5_4:3845533-3845552 Msa0830830:intron 25.0%
!! CATTTTACTTATGAATTTGG+GGG - chr5_4:3845534-3845553 Msa0830830:intron 25.0%
! AATAACTGAGATAAATTGAG+AGG - chr5_4:3845566-3845585 Msa0830830:intron 25.0%
! TAGAACTATTAAAGGACTAT+TGG - chr5_4:3845596-3845615 Msa0830830:intron 25.0%
!! TTGTTATTATATAGGAACTG+GGG + chr5_4:3845693-3845712 None:intergenic 25.0%
!!! CTTGTTATTATATAGGAACT+GGG + chr5_4:3845694-3845713 None:intergenic 25.0%
!!! ACTTGTTATTATATAGGAAC+TGG + chr5_4:3845695-3845714 None:intergenic 25.0%
! GAAATATGTATGAAATGCAA+AGG + chr5_4:3845883-3845902 None:intergenic 25.0%
!!! ATAGTACTTAGATTTTGAGT+CGG + chr5_4:3846447-3846466 None:intergenic 25.0%
! ATTCAATGTGTAAATTGACA+TGG + chr5_4:3846530-3846549 None:intergenic 25.0%
! TTACACATTGAATAGTTGTT+TGG - chr5_4:3846537-3846556 Msa0830830:five_prime_UTR 25.0%
! GAAAAAATCAAAGTCAATAG+TGG - chr5_4:3846571-3846590 Msa0830830:five_prime_UTR 25.0%
! ATAAATAAACCATCAAGCAT+TGG - chr5_4:3846759-3846778 Msa0830830:five_prime_UTR 25.0%
!! TGATATTGCTCATGATTTTT+AGG + chr5_4:3846811-3846830 None:intergenic 25.0%
! ATGTGTATATACTTGAAAAG+TGG + chr5_4:3846870-3846889 None:intergenic 25.0%
! ACATATTAGTGATGTATATG+AGG - chr5_4:3846886-3846905 Msa0830830:five_prime_UTR 25.0%
AATCTGTAAACCGTTAGTTA+GGG + chr5_4:3843624-3843643 None:intergenic 30.0%
TAATCTGTAAACCGTTAGTT+AGG + chr5_4:3843625-3843644 None:intergenic 30.0%
! CTAACTTTTAAACCGCTTTA+AGG - chr5_4:3843789-3843808 Msa0830830:three_prime_UTR 30.0%
!! ATGTGACTGTTTCTTTTAAC+TGG - chr5_4:3844076-3844095 Msa0830830:CDS 30.0%
AACTGAATTATTAGGCCTAA+CGG - chr5_4:3844294-3844313 Msa0830830:CDS 30.0%
!!! TATATATTTTTGGCACCGTT+AGG + chr5_4:3844312-3844331 None:intergenic 30.0%
! CTCTTTGTATCTCTTGATTT+TGG - chr5_4:3844333-3844352 Msa0830830:CDS 30.0%
CACATATAGTTGGAAGAAAT+TGG - chr5_4:3844397-3844416 Msa0830830:intron 30.0%
TCGTGAAGATTGAAAATGAA+AGG + chr5_4:3844423-3844442 None:intergenic 30.0%
! ACTTTGAGAGTAACAATTCA+AGG + chr5_4:3844628-3844647 None:intergenic 30.0%
AACATCAGTTGAAGTTATCA+AGG - chr5_4:3844694-3844713 Msa0830830:intron 30.0%
GAAGTTATCAAGGACAAAAA+TGG - chr5_4:3844704-3844723 Msa0830830:intron 30.0%
! TCTACCCTTTTGAATTTGAT+TGG - chr5_4:3844817-3844836 Msa0830830:CDS 30.0%
AGCACCAATCAAATTCAAAA+GGG + chr5_4:3844824-3844843 None:intergenic 30.0%
TAGCACCAATCAAATTCAAA+AGG + chr5_4:3844825-3844844 None:intergenic 30.0%
CAAAAAAACCTCATTTACCT+TGG + chr5_4:3844942-3844961 None:intergenic 30.0%
! TATATGTGATAGTGATTCGT+AGG - chr5_4:3845063-3845082 Msa0830830:intron 30.0%
ATTTCTCTCTCTTTCCAATT+AGG - chr5_4:3845152-3845171 Msa0830830:intron 30.0%
! CTACTATCTAAAATTACCTG+TGG + chr5_4:3845228-3845247 None:intergenic 30.0%
! AGATAGATAATAAGGTTGGT+TGG - chr5_4:3845290-3845309 Msa0830830:CDS 30.0%
!!! TTATTTTAGTTTGGAAACCG+TGG - chr5_4:3845319-3845338 Msa0830830:CDS 30.0%
GATTTGCAAGGAATAAGATA+TGG - chr5_4:3845359-3845378 Msa0830830:intron 30.0%
!! GCGATTCATTTTTCTTTGTA+AGG + chr5_4:3845631-3845650 None:intergenic 30.0%
ATCTTGAGAATTGAGATTGT+TGG - chr5_4:3845726-3845745 Msa0830830:intron 30.0%
ATTTCTCCATATCAGATATC+AGG - chr5_4:3845898-3845917 Msa0830830:intron 30.0%
!! TTATCTTGAAAGTGTTGGAA+TGG + chr5_4:3845932-3845951 None:intergenic 30.0%
! TGATCTTATCTTGAAAGTGT+TGG + chr5_4:3845937-3845956 None:intergenic 30.0%
TCAATAATCGGCAAAAGTTA+AGG + chr5_4:3846077-3846096 None:intergenic 30.0%
TGCTTTAACATTTGAATCTG+AGG - chr5_4:3846181-3846200 Msa0830830:five_prime_UTR 30.0%
! GCATGTTGGTAAAATTTCAA+GGG + chr5_4:3846271-3846290 None:intergenic 30.0%
! AGCATGTTGGTAAAATTTCA+AGG + chr5_4:3846272-3846291 None:intergenic 30.0%
! GAAATTTTACCAACATGCTA+AGG - chr5_4:3846273-3846292 Msa0830830:five_prime_UTR 30.0%
TTTCTTCTCATGATCTAGAA+CGG + chr5_4:3846351-3846370 None:intergenic 30.0%
AATGTGTAAATTGACATGGA+TGG + chr5_4:3846526-3846545 None:intergenic 30.0%
!!! TCAAAGTCAATAGTGGATTT+TGG - chr5_4:3846578-3846597 Msa0830830:five_prime_UTR 30.0%
!!! CAAAGTCAATAGTGGATTTT+GGG - chr5_4:3846579-3846598 Msa0830830:five_prime_UTR 30.0%
!!! AAAGTCAATAGTGGATTTTG+GGG - chr5_4:3846580-3846599 Msa0830830:five_prime_UTR 30.0%
AAATCCGATAACCTTAAAAC+CGG - chr5_4:3846649-3846668 Msa0830830:five_prime_UTR 30.0%
AAACAATAACCAATGCTTGA+TGG + chr5_4:3846771-3846790 None:intergenic 30.0%
TGAGCAATATCAATAAGAAG+AGG - chr5_4:3846819-3846838 Msa0830830:five_prime_UTR 30.0%
AATGCAAAGCATACATAAAG+AGG + chr5_4:3846954-3846973 None:intergenic 30.0%
ACAATTTCATCTACATGACT+TGG + chr5_4:3846989-3847008 None:intergenic 30.0%
ATCTGTAAACCGTTAGTTAG+GGG + chr5_4:3843623-3843642 None:intergenic 35.0%
GATTATGGACCTTTCATTTC+AGG + chr5_4:3843709-3843728 None:intergenic 35.0%
GATCTTTCAAACCCTTAAAG+CGG + chr5_4:3843804-3843823 None:intergenic 35.0%
TACAACTCTGAATTGTCAAC+TGG - chr5_4:3843825-3843844 Msa0830830:three_prime_UTR 35.0%
ACAACTCTGAATTGTCAACT+GGG - chr5_4:3843826-3843845 Msa0830830:three_prime_UTR 35.0%
TTGTCACAAGAAAGTTGTCA+TGG - chr5_4:3844454-3844473 Msa0830830:intron 35.0%
TGTCACAAGAAAGTTGTCAT+GGG - chr5_4:3844455-3844474 Msa0830830:intron 35.0%
CAACTTTGATGTGACAGAAT+TGG + chr5_4:3844507-3844526 None:intergenic 35.0%
CAATTCTGTCACATCAAAGT+TGG - chr5_4:3844505-3844524 Msa0830830:CDS 35.0%
CAAATTCAAAAGGGTAGATG+CGG + chr5_4:3844815-3844834 None:intergenic 35.0%
GTTATTGTTCACTAGTACCA+AGG - chr5_4:3844922-3844941 Msa0830830:intron 35.0%
AGTGCTACATAGGAAATAAC+TGG + chr5_4:3844967-3844986 None:intergenic 35.0%
! GCACTGACACTTCAAATTAA+AGG - chr5_4:3844982-3845001 Msa0830830:intron 35.0%
! CTTCAAATTAAAGGCATGTC+CGG - chr5_4:3844991-3845010 Msa0830830:intron 35.0%
TTACCTGTGGAAAACAGATT+GGG + chr5_4:3845215-3845234 None:intergenic 35.0%
ATTACCTGTGGAAAACAGAT+TGG + chr5_4:3845216-3845235 None:intergenic 35.0%
ATCTTCATATCGTCTTCAGA+TGG + chr5_4:3845457-3845476 None:intergenic 35.0%
CTGAAGACGATATGAAGATA+TGG - chr5_4:3845458-3845477 Msa0830830:CDS 35.0%
ATATGAAGATATGGCCACAT+AGG - chr5_4:3845467-3845486 Msa0830830:CDS 35.0%
! GTATCTAGCTACATGCTTTT+GGG + chr5_4:3845671-3845690 None:intergenic 35.0%
TGCGAGATATCATATTCAGA+CGG + chr5_4:3845827-3845846 None:intergenic 35.0%
TGAATATGATATCTCGCATC+CGG - chr5_4:3845829-3845848 Msa0830830:intron 35.0%
AATGCAAAGGAGAAACTGAA+AGG + chr5_4:3845870-3845889 None:intergenic 35.0%
CTCACTTCACTGTCAATAAT+CGG + chr5_4:3846089-3846108 None:intergenic 35.0%
GATTATTGACAGTGAAGTGA+GGG - chr5_4:3846088-3846107 Msa0830830:five_prime_UTR 35.0%
! TAACATTTGAATCTGAGGTG+AGG - chr5_4:3846186-3846205 Msa0830830:five_prime_UTR 35.0%
CAAATAAGACCTTAGCATGT+TGG + chr5_4:3846285-3846304 None:intergenic 35.0%
!! GCTAAGGTCTTATTTGTGTT+AGG - chr5_4:3846289-3846308 Msa0830830:five_prime_UTR 35.0%
!! AAGGTCTTATTTGTGTTAGG+TGG - chr5_4:3846292-3846311 Msa0830830:five_prime_UTR 35.0%
TTATCTCGATTCTAGCAGTA+TGG - chr5_4:3846322-3846341 Msa0830830:five_prime_UTR 35.0%
ACGAACATTTGTGATACGAA+AGG - chr5_4:3846370-3846389 Msa0830830:five_prime_UTR 35.0%
ACATTTGTGATACGAAAGGA+AGG - chr5_4:3846374-3846393 Msa0830830:five_prime_UTR 35.0%
! AATAGTTGTTTGGAATCCCT+GGG - chr5_4:3846547-3846566 Msa0830830:five_prime_UTR 35.0%
!!! GACTTTGATTTTTTCTCCCA+GGG + chr5_4:3846566-3846585 None:intergenic 35.0%
!!! TGACTTTGATTTTTTCTCCC+AGG + chr5_4:3846567-3846586 None:intergenic 35.0%
AATCCGATAACCTTAAAACC+GGG - chr5_4:3846650-3846669 Msa0830830:five_prime_UTR 35.0%
TTGAAGTCAAGTCAAGTAGA+AGG + chr5_4:3846713-3846732 None:intergenic 35.0%
GGGTCATACAACACTCAAAA+GGG + chr5_4:3843603-3843622 None:intergenic 40.0%
GTTGTATGACCCCTAACTAA+CGG - chr5_4:3843611-3843630 Msa0830830:three_prime_UTR 40.0%
! CCTTTCATTTCAGGTCAACA+AGG + chr5_4:3843700-3843719 None:intergenic 40.0%
CCTTGTTGACCTGAAATGAA+AGG - chr5_4:3843697-3843716 Msa0830830:three_prime_UTR 40.0%
TTAAATGGAGGAAGACTTGG+TGG + chr5_4:3843731-3843750 None:intergenic 40.0%
! GCTTTAAATGGAGGAAGACT+TGG + chr5_4:3843734-3843753 None:intergenic 40.0%
GATCAATAACTAAGCGGCAA+AGG + chr5_4:3843992-3844011 None:intergenic 40.0%
!! GTTGTGTGTGTGACTTTTTC+AGG - chr5_4:3844847-3844866 Msa0830830:CDS 40.0%
!!! CTTTTTCAGGTTAGCTTGCA+CGG - chr5_4:3844860-3844879 Msa0830830:CDS 40.0%
CTTTCATGGAAAACAGAACG+CGG - chr5_4:3844893-3844912 Msa0830830:intron 40.0%
CACTAGTACCAAGGTAAATG+AGG - chr5_4:3844931-3844950 Msa0830830:intron 40.0%
! TTGAAGTGTCAGTGCTACAT+AGG + chr5_4:3844977-3844996 None:intergenic 40.0%
ACACCAATCATAGAAGTGAC+CGG + chr5_4:3845013-3845032 None:intergenic 40.0%
ATCAGACACAACACTGATAC+TGG + chr5_4:3845044-3845063 None:intergenic 40.0%
!!! TGGTTTTGGAGGAGTATAGA+CGG + chr5_4:3845178-3845197 None:intergenic 40.0%
! AATCCCAATCTGTTTTCCAC+AGG - chr5_4:3845209-3845228 Msa0830830:CDS 40.0%
TAGAGCAACATGGATTTGCA+AGG - chr5_4:3845347-3845366 Msa0830830:intron 40.0%
! GCTTTTCCATTTGAATCCGT+GGG + chr5_4:3845412-3845431 None:intergenic 40.0%
! AGCTTTTCCATTTGAATCCG+TGG + chr5_4:3845413-3845432 None:intergenic 40.0%
AAAATGAATCGCATCCAGAG+AGG - chr5_4:3845639-3845658 Msa0830830:intron 40.0%
! GGTATCTAGCTACATGCTTT+TGG + chr5_4:3845672-3845691 None:intergenic 40.0%
TACGGACCTGATATCTGATA+TGG + chr5_4:3845907-3845926 None:intergenic 40.0%
!! GAAAGTGTTGGAATGGCATA+CGG + chr5_4:3845925-3845944 None:intergenic 40.0%
CGATTATTGACAGTGAAGTG+AGG - chr5_4:3846087-3846106 Msa0830830:five_prime_UTR 40.0%
GGTAAAATTTCAAGGGTTGC+AGG + chr5_4:3846264-3846283 None:intergenic 40.0%
GAAAGACACTTACCAACATC+TGG + chr5_4:3846404-3846423 None:intergenic 40.0%
! GAATAGTTGTTTGGAATCCC+TGG - chr5_4:3846546-3846565 Msa0830830:five_prime_UTR 40.0%
!!! TCTCCCGGTTTTAAGGTTAT+CGG + chr5_4:3846656-3846675 None:intergenic 40.0%
GGGGTCATACAACACTCAAA+AGG + chr5_4:3843604-3843623 None:intergenic 45.0%
!! GAGGAAGACTTGGTGGATTA+TGG + chr5_4:3843724-3843743 None:intergenic 45.0%
GTCAACTGGGTCGTTTATTC+TGG - chr5_4:3843839-3843858 Msa0830830:three_prime_UTR 45.0%
TGGACTTTCAACGCCTATTG+TGG + chr5_4:3843931-3843950 None:intergenic 45.0%
GTTGTTCTTCGAAACGTTCG+AGG - chr5_4:3844737-3844756 Msa0830830:intron 45.0%
TGTCCGGTCACTTCTATGAT+TGG - chr5_4:3845007-3845026 Msa0830830:intron 45.0%
! AGGAGTATAGACGGCCTAAT+TGG + chr5_4:3845169-3845188 None:intergenic 45.0%
!!! ATTCCTCCTCGTACTGGTTT+TGG + chr5_4:3845192-3845211 None:intergenic 45.0%
CATGTTGCTCTAGTGTTCCA+CGG + chr5_4:3845339-3845358 None:intergenic 45.0%
!!! CTTTTGGGATTTCTCCTCTC+TGG + chr5_4:3845656-3845675 None:intergenic 45.0%
AAGGCTTGCCATTGACATTC+CGG + chr5_4:3845851-3845870 None:intergenic 45.0%
ACAGTGAAGTGAGGGTAGAA+GGG - chr5_4:3846096-3846115 Msa0830830:five_prime_UTR 45.0%
CCTTCTGGTATAGGTTATCC+AGG + chr5_4:3846139-3846158 None:intergenic 45.0%
CCTGGATAACCTATACCAGA+AGG - chr5_4:3846136-3846155 Msa0830830:five_prime_UTR 45.0%
! TGAAGCGTTCCTTCTGGTAT+AGG + chr5_4:3846148-3846167 None:intergenic 45.0%
AAGGAACGCTTCACAGAACA+AGG - chr5_4:3846155-3846174 Msa0830830:five_prime_UTR 45.0%
AAGGAAGGTCTTCCAGATGT+TGG - chr5_4:3846389-3846408 Msa0830830:five_prime_UTR 45.0%
! CCATTCTTCTCCCGGTTTTA+AGG + chr5_4:3846663-3846682 None:intergenic 45.0%
CCTTAAAACCGGGAGAAGAA+TGG - chr5_4:3846660-3846679 Msa0830830:five_prime_UTR 45.0%
GTACAACAGAAAGCTCCAAG+CGG + chr5_4:3846691-3846710 None:intergenic 45.0%
CTGTTGTGCTGGGATTGAGA+GGG + chr5_4:3843667-3843686 None:intergenic 50.0%
ACTGTTGTGCTGGGATTGAG+AGG + chr5_4:3843668-3843687 None:intergenic 50.0%
TCTCAATCCCAGCACAACAG+TGG - chr5_4:3843667-3843686 Msa0830830:three_prime_UTR 50.0%
!! TTTCAGGTTAGCTTGCACGG+AGG - chr5_4:3844863-3844882 Msa0830830:CDS 50.0%
!! TTCAGGTTAGCTTGCACGGA+GGG - chr5_4:3844864-3844883 Msa0830830:CDS 50.0%
ACGGAGGGCAAGTTCTTTCA+TGG - chr5_4:3844879-3844898 Msa0830830:intron 50.0%
ACTCCTCCAAAACCAGTACG+AGG - chr5_4:3845183-3845202 Msa0830830:intron 50.0%
ATTGGGATTCCTCCTCGTAC+TGG + chr5_4:3845198-3845217 None:intergenic 50.0%
CGTGGAACACTAGAGCAACA+TGG - chr5_4:3845337-3845356 Msa0830830:intron 50.0%
TAAAGCGTGTCGCACCTATG+TGG + chr5_4:3845484-3845503 None:intergenic 50.0%
! TCAGCTTCGAGTTTCGCCTA+AGG - chr5_4:3845781-3845800 Msa0830830:CDS 50.0%
! CAGCTTCGAGTTTCGCCTAA+GGG - chr5_4:3845782-3845801 Msa0830830:CDS 50.0%
GTTTCGCCTAAGGGTCTGTT+TGG - chr5_4:3845791-3845810 Msa0830830:intron 50.0%
TCTCGCATCCGGAATGTCAA+TGG - chr5_4:3845840-3845859 Msa0830830:intron 50.0%
GACAGTGAAGTGAGGGTAGA+AGG - chr5_4:3846095-3846114 Msa0830830:five_prime_UTR 50.0%
TGAAGTGAGGGTAGAAGGGT+TGG - chr5_4:3846100-3846119 Msa0830830:five_prime_UTR 50.0%
GTTGGAGACTCTTGACTACC+TGG - chr5_4:3846118-3846137 Msa0830830:five_prime_UTR 50.0%
! GTTCTGTGAAGCGTTCCTTC+TGG + chr5_4:3846154-3846173 None:intergenic 50.0%
GTACAAGCAAATGCTCTGCG+TGG - chr5_4:3846610-3846629 Msa0830830:five_prime_UTR 50.0%
AAGCAAATGCTCTGCGTGGA+TGG - chr5_4:3846614-3846633 Msa0830830:five_prime_UTR 50.0%
AAACCGGGAGAAGAATGGAC+CGG - chr5_4:3846665-3846684 Msa0830830:five_prime_UTR 50.0%
TTGTGCTGGGATTGAGAGGG+AGG + chr5_4:3843664-3843683 None:intergenic 55.0%
CCTGCTACCACTGTTGTGCT+GGG + chr5_4:3843677-3843696 None:intergenic 55.0%
CGTTCGAGGAGCTTCAGCAA+CGG - chr5_4:3844751-3844770 Msa0830830:intron 55.0%
!!! CCTCCTCGTACTGGTTTTGG+AGG + chr5_4:3845189-3845208 None:intergenic 55.0%
CCTCCAAAACCAGTACGAGG+AGG - chr5_4:3845186-3845205 Msa0830830:CDS 55.0%
AAATCCTCCACCACTGCCCA+CGG - chr5_4:3845393-3845412 Msa0830830:intron 55.0%
TTTGAATCCGTGGGCAGTGG+TGG + chr5_4:3845403-3845422 None:intergenic 55.0%
CCATTTGAATCCGTGGGCAG+TGG + chr5_4:3845406-3845425 None:intergenic 55.0%
CCACTGCCCACGGATTCAAA+TGG - chr5_4:3845403-3845422 Msa0830830:intron 55.0%
CTGCTGCCAAACAGACCCTT+AGG + chr5_4:3845800-3845819 None:intergenic 55.0%
AGGGTCTGTTTGGCAGCAGA+TGG - chr5_4:3845801-3845820 Msa0830830:intron 55.0%
AACAGAAAGCTCCAAGCGGC+CGG + chr5_4:3846687-3846706 None:intergenic 55.0%
CCCAGCACAACAGTGGTAGC+AGG - chr5_4:3843674-3843693 Msa0830830:three_prime_UTR 60.0%
GCCTGCTACCACTGTTGTGC+TGG + chr5_4:3843678-3843697 None:intergenic 60.0%
TGCGTGGATGGTGCAGCAGT+TGG - chr5_4:3846626-3846645 Msa0830830:five_prime_UTR 60.0%
AGAAGAATGGACCGGCCGCT+TGG - chr5_4:3846673-3846692 Msa0830830:five_prime_UTR 60.0%
GAATCCGTGGGCAGTGGTGG+AGG + chr5_4:3845400-3845419 None:intergenic 65.0%
CGGCCGGTCCATTCTTCTCC+CGG + chr5_4:3846671-3846690 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 3843597 3847075 3843597 ID=Msa0830830;Name=Msa0830830
chr5_4 mRNA 3843597 3847075 3843597 ID=Msa0830830-mRNA-1;Parent=Msa0830830;Name=Msa0830830-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1062|1|1|1|1|1|8|354|304
chr5_4 exon 3843597 3844120 3843597 ID=Msa0830830-mRNA-1:exon:1513;Parent=Msa0830830-mRNA-1
chr5_4 exon 3844262 3844361 3844262 ID=Msa0830830-mRNA-1:exon:1512;Parent=Msa0830830-mRNA-1
chr5_4 exon 3844470 3844572 3844470 ID=Msa0830830-mRNA-1:exon:1511;Parent=Msa0830830-mRNA-1
chr5_4 exon 3844753 3844887 3844753 ID=Msa0830830-mRNA-1:exon:1510;Parent=Msa0830830-mRNA-1
chr5_4 exon 3845184 3845344 3845184 ID=Msa0830830-mRNA-1:exon:1509;Parent=Msa0830830-mRNA-1
chr5_4 exon 3845442 3845498 3845442 ID=Msa0830830-mRNA-1:exon:1508;Parent=Msa0830830-mRNA-1
chr5_4 exon 3845729 3845803 3845729 ID=Msa0830830-mRNA-1:exon:1507;Parent=Msa0830830-mRNA-1
chr5_4 exon 3845900 3847075 3845900 ID=Msa0830830-mRNA-1:exon:1506;Parent=Msa0830830-mRNA-1
chr5_4 five_prime_UTR 3846014 3847075 3846014 ID=Msa0830830-mRNA-1:five_prime_utr;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3845900 3846013 3845900 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3845729 3845803 3845729 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3845442 3845498 3845442 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3845184 3845344 3845184 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3844753 3844887 3844753 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3844470 3844572 3844470 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3844262 3844361 3844262 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 CDS 3843951 3844120 3843951 ID=Msa0830830-mRNA-1:cds;Parent=Msa0830830-mRNA-1
chr5_4 three_prime_UTR 3843597 3843950 3843597 ID=Msa0830830-mRNA-1:three_prime_utr;Parent=Msa0830830-mRNA-1
Gene Sequence

>Msa0830830

ATGAATCATTCTGGAGCTGAAAGTGATCATAAAATAACATCAGTTGAAGTTATCAAGGACAAAAATGGAATAGAACAAGTTGTTCTTCGAAACGTTCGAGGAGCTTCAGCAACGGTTAGCTTGCACGGAGGGCAAGTTCTTTCATGGAAAACAGAACGCGGTGAAGAGTTATTGTTCACTAGTACCAAGGCCGTCTATACTCCTCCAAAACCAGTACGAGGAGGAATCCCAATCTGTTTTCCACAGTTTGGAAACCGTGGAACACTAGAGCAACATGGATTTGCAAGGAATAAGATATGGGTTATCGATCAAAATCCTCCACCACTGCCCACGGATTCAAATGGAAAAGCTTGCATCGACTTGCTGCTCAAACCATCTGAAGACGATATGAAGATATGGCCACATAGCTTCGAGTTTCGCCTAAGGGTCTGTTTGGCAGCAGATGGCCGTCTGAATATGATATCTCGCATCCGGAATGTCAATGGCAAGCCTTTCAGTTTCTCCTTTGCATTTCATACATATTTCTCCATATCAGATATCAGTGAAGTGAGGGTAGAAGGGTTGGAGACTCTTGACTACCTGGATAACCTATACCAGAAGGAACGCTTCACAGAACAAGGAGATGCTTTAACATTTGAATCTGAGGTGGATCGAGTTTATCTCGATTCTAGCAGTATGGTAGCCGTTCTAGATCATGAGAAGAAACGAACATTTGTGATACGAAAGGAAGGTCTTCCAGATGTTGTTGTTTGGAATCCCTGGGAGAAAAAATCAAAGTCAATAGTGGATTTTGGGGATGAAGAGTACAAGCAAATGCTCTGCGTGGATGGTGCAGCAGTTGGAAATCCGATAACCTTAAAACCGGGAGAAGAATGGACCGGCCGCTTGGAGCTTTCTGTTGTACCTTCTACTTGA

Protein sequence

>Msa0830830

MNHSGAESDHKITSVEVIKDKNGIEQVVLRNVRGASATVSLHGGQVLSWKTERGEELLFTSTKAVYTPPKPVRGGIPICFPQFGNRGTLEQHGFARNKIWVIDQNPPPLPTDSNGKACIDLLLKPSEDDMKIWPHSFEFRLRVCLAADGRLNMISRIRNVNGKPFSFSFAFHTYFSISDISEVRVEGLETLDYLDNLYQKERFTEQGDALTFESEVDRVYLDSSSMVAVLDHEKKRTFVIRKEGLPDVVVWNPWEKKSKSIVDFGDEEYKQMLCVDGAAVGNPITLKPGEEWTGRLELSVVPST*