AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0778560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778560 MtrunA17_Chr5g0434621 96.739 276 9 0 4 279 78 353 0.0 551
Msa0778560 MtrunA17_Chr3g0092131 45.070 284 144 3 7 278 79 362 1.17e-83 255
Msa0778560 MtrunA17_Chr4g0060811 46.718 259 136 2 7 263 83 341 2.48e-80 246
Msa0778560 MtrunA17_Chr3g0077571 41.221 262 151 2 4 264 81 340 2.70e-69 218
Msa0778560 MtrunA17_Chr8g0380041 41.473 258 144 6 13 265 91 346 1.89e-66 211
Msa0778560 MtrunA17_Chr7g0274991 39.163 263 157 3 4 263 85 347 7.60e-66 209
Msa0778560 MtrunA17_Chr4g0068441 40.580 276 155 4 6 275 87 359 7.64e-66 209
Msa0778560 MtrunA17_Chr2g0294301 39.773 264 153 3 7 264 88 351 1.52e-63 204
Msa0778560 MtrunA17_Chr2g0294311 38.550 262 157 2 6 263 94 355 2.72e-62 201
Msa0778560 MtrunA17_Chr7g0275011 37.970 266 162 3 2 264 84 349 4.77e-62 200
Msa0778560 MtrunA17_Chr3g0086641 37.143 245 150 3 25 265 109 353 1.50e-61 198
Msa0778560 MtrunA17_Chr4g0017431 35.606 264 166 3 2 261 80 343 2.67e-61 197
Msa0778560 MtrunA17_Chr4g0008851 37.970 266 160 4 4 264 84 349 3.54e-61 197
Msa0778560 MtrunA17_Chr2g0285061 36.719 256 155 6 25 275 103 356 1.18e-59 193
Msa0778560 MtrunA17_Chr8g0374101 38.462 247 145 4 24 263 112 358 3.32e-59 192
Msa0778560 MtrunA17_Chr1g0189901 35.849 265 167 3 2 263 81 345 1.25e-58 191
Msa0778560 MtrunA17_Chr7g0275021 36.364 264 165 3 4 264 86 349 1.86e-58 191
Msa0778560 MtrunA17_Chr6g0457921 37.121 264 163 3 4 264 82 345 1.56e-57 188
Msa0778560 MtrunA17_Chr7g0275001 37.023 262 161 3 6 263 79 340 8.17e-56 183
Msa0778560 MtrunA17_Chr1g0182811 37.643 263 159 5 7 264 88 350 3.94e-55 182
Msa0778560 MtrunA17_Chr7g0215961 34.717 265 170 3 3 264 71 335 4.62e-55 181
Msa0778560 MtrunA17_Chr1g0189931 34.848 264 169 3 4 264 84 347 5.49e-55 181
Msa0778560 MtrunA17_Chr5g0396511 34.586 266 171 2 2 264 96 361 1.01e-52 176
Msa0778560 MtrunA17_Chr3g0131321 33.955 268 171 5 2 264 86 352 8.39e-51 171
Msa0778560 MtrunA17_Chr3g0077581 36.466 266 157 6 18 271 96 361 9.53e-51 171
Msa0778560 MtrunA17_Chr5g0438621 34.432 273 172 6 2 269 80 350 5.66e-48 163
Msa0778560 MtrunA17_Chr5g0444401 32.491 277 175 5 2 269 79 352 2.51e-47 161
Msa0778560 MtrunA17_Chr2g0284921 37.097 248 145 6 25 268 106 346 6.72e-47 160
Msa0778560 MtrunA17_Chr1g0189891 35.206 267 160 7 3 264 81 339 7.81e-47 160
Msa0778560 MtrunA17_Chr3g0085881 37.449 243 141 5 25 265 103 336 1.67e-46 159
Msa0778560 MtrunA17_Chr3g0099161 32.384 281 175 5 4 277 145 417 5.74e-46 159
Msa0778560 MtrunA17_Chr5g0438641 32.955 264 170 6 2 260 82 343 9.76e-46 157
Msa0778560 MtrunA17_Chr3g0099231 30.249 281 180 6 4 277 81 352 1.15e-45 157
Msa0778560 MtrunA17_Chr6g0459921 34.649 228 145 4 48 271 125 352 1.50e-44 154
Msa0778560 MtrunA17_Chr3g0099151 32.482 274 164 7 4 264 140 405 2.08e-44 155
Msa0778560 MtrunA17_Chr5g0438631 32.482 274 177 6 2 269 78 349 3.81e-44 153
Msa0778560 MtrunA17_Chr6g0455661 34.956 226 143 4 50 271 238 463 5.71e-44 155
Msa0778560 MtrunA17_Chr3g0120861 32.700 263 170 5 2 259 88 348 1.29e-43 152
Msa0778560 MtrunA17_Chr2g0320671 33.824 272 167 8 2 265 80 346 1.06e-42 149
Msa0778560 MtrunA17_Chr3g0105401 32.669 251 164 4 13 259 90 339 1.56e-42 149
Msa0778560 MtrunA17_Chr2g0284991 34.694 245 150 6 25 265 104 342 1.29e-41 147
Msa0778560 MtrunA17_Chr1g0156911 33.846 260 166 5 4 259 89 346 3.84e-41 145
Msa0778560 MtrunA17_Chr5g0405821 35.688 269 158 9 4 263 97 359 2.39e-40 143
Msa0778560 MtrunA17_Chr2g0301641 33.463 257 149 7 28 272 118 364 2.58e-40 144
Msa0778560 MtrunA17_Chr2g0285001 34.800 250 151 6 21 265 101 343 4.27e-40 143
Msa0778560 MtrunA17_Chr2g0284951 35.918 245 143 7 25 265 104 338 8.51e-40 142
Msa0778560 MtrunA17_Chr8g0341001 34.074 270 164 8 2 262 82 346 1.20e-39 141
Msa0778560 MtrunA17_Chr8g0370951 30.233 258 172 3 10 260 91 347 7.48e-39 139
Msa0778560 MtrunA17_Chr3g0142921 32.296 257 168 5 2 254 87 341 8.58e-39 139
Msa0778560 MtrunA17_Chr5g0405831 35.496 262 160 7 4 259 96 354 3.26e-38 137
Msa0778560 MtrunA17_Chr8g0380031 32.171 258 152 6 25 278 155 393 3.73e-38 138
Msa0778560 MtrunA17_Chr8g0371471 32.443 262 166 8 7 261 96 353 4.87e-38 137
Msa0778560 MtrunA17_Chr8g0370961 33.043 230 140 6 42 264 6 228 1.91e-37 132
Msa0778560 MtrunA17_Chr5g0432101 30.451 266 176 6 2 260 83 346 2.08e-37 135
Msa0778560 MtrunA17_Chr2g0330781 32.453 265 167 7 4 260 83 343 3.05e-37 135
Msa0778560 MtrunA17_Chr1g0156931 31.250 256 167 6 4 254 93 344 8.42e-37 134
Msa0778560 MtrunA17_Chr1g0156921 31.128 257 166 6 4 253 94 346 1.01e-36 134
Msa0778560 MtrunA17_Chr1g0156891 30.916 262 165 7 2 254 94 348 1.85e-36 133
Msa0778560 MtrunA17_Chr4g0027521 30.403 273 176 7 2 264 77 345 6.10e-36 131
Msa0778560 MtrunA17_Chr8g0371481 30.798 263 170 8 7 261 96 354 2.94e-35 130
Msa0778560 MtrunA17_Chr3g0085231 31.599 269 160 7 4 264 82 334 5.59e-35 129
Msa0778560 MtrunA17_Chr8g0371491 31.439 264 172 7 2 259 86 346 9.88e-35 128
Msa0778560 MtrunA17_Chr2g0284941 33.197 244 134 6 25 265 104 321 1.09e-34 128
Msa0778560 MtrunA17_Chr1g0156901 30.739 257 172 5 2 254 100 354 1.26e-34 128
Msa0778560 MtrunA17_Chr3g0142941 30.502 259 166 7 4 254 99 351 1.52e-34 128
Msa0778560 MtrunA17_Chr8g0344931 32.083 240 149 5 26 260 110 340 1.62e-34 127
Msa0778560 MtrunA17_Chr5g0440501 28.384 229 145 5 51 265 10 233 1.33e-33 122
Msa0778560 MtrunA17_Chr8g0344941 30.657 274 171 8 2 264 92 357 1.57e-33 125
Msa0778560 MtrunA17_Chr5g0420811 29.710 276 178 8 2 273 83 346 1.64e-31 119
Msa0778560 MtrunA17_Chr8g0349341 27.823 248 161 5 26 264 110 348 2.06e-29 114
Msa0778560 MtrunA17_Chr2g0283191 27.407 270 174 9 2 254 88 352 2.55e-28 111
Msa0778560 MtrunA17_Chr8g0349321 27.823 248 161 5 26 264 110 348 6.14e-28 110
Msa0778560 MtrunA17_Chr4g0046151 29.151 271 166 11 2 254 86 348 2.67e-27 108
Msa0778560 MtrunA17_Chr4g0027571 31.604 212 138 5 54 260 2 211 3.89e-26 102
Msa0778560 MtrunA17_Chr1g0160101 30.544 239 140 8 55 271 146 380 7.20e-26 105
Msa0778560 MtrunA17_Chr1g0157001 29.851 268 168 6 4 260 88 346 2.67e-25 103
Msa0778560 MtrunA17_Chr6g0450731 29.070 258 164 6 28 271 102 354 3.33e-25 102
Msa0778560 MtrunA17_Chr5g0437421 28.727 275 168 8 2 258 82 346 5.02e-25 102
Msa0778560 MtrunA17_Chr6g0450721 32.663 199 113 5 79 268 163 349 1.63e-23 98.2
Msa0778560 MtrunA17_Chr8g0370981 25.649 308 166 8 10 263 103 401 4.47e-23 97.8
Msa0778560 MtrunA17_Chr2g0284931 27.982 218 132 5 50 265 8 202 9.14e-23 93.6
Msa0778560 MtrunA17_Chr7g0271551 29.565 230 140 7 55 269 133 355 3.42e-22 94.7
Msa0778560 MtrunA17_Chr1g0159971 28.631 241 142 7 55 271 150 384 4.49e-22 94.7
Msa0778560 MtrunA17_Chr1g0160031 27.306 271 165 8 28 271 109 374 4.52e-22 94.4
Msa0778560 MtrunA17_Chr8g0349301 27.363 201 134 3 22 219 105 296 8.11e-22 92.8
Msa0778560 MtrunA17_Chr6g0450711 29.236 301 168 10 2 271 168 454 9.34e-22 94.4
Msa0778560 MtrunA17_Chr7g0226941 29.139 302 167 12 2 268 79 368 2.18e-21 92.4
Msa0778560 MtrunA17_Chr4g0057991 25.862 290 183 10 2 271 91 368 4.02e-21 91.7
Msa0778560 MtrunA17_Chr1g0159991 28.638 213 128 6 78 271 166 373 6.12e-21 91.3
Msa0778560 MtrunA17_Chr7g0226911 24.183 306 187 11 2 271 81 377 1.24e-20 90.5
Msa0778560 MtrunA17_Chr1g0160011 26.568 271 167 9 28 271 110 375 1.77e-20 90.1
Msa0778560 MtrunA17_Chr6g0450701 27.899 276 154 9 28 271 109 371 3.37e-20 89.4
Msa0778560 MtrunA17_Chr7g0229581 36.496 137 83 3 128 260 8 144 5.28e-20 84.7
Msa0778560 MtrunA17_Chr8g0349331 27.174 184 125 3 90 264 133 316 1.01e-19 87.4
Msa0778560 MtrunA17_Chr2g0283481 26.241 282 176 9 2 260 98 370 1.53e-19 87.4
Msa0778560 MtrunA17_Chr8g0352901 27.700 213 133 4 77 271 156 365 1.58e-19 87.4
Msa0778560 MtrunA17_Chr8g0381581 24.918 305 184 11 2 271 86 380 2.79e-19 86.7
Msa0778560 MtrunA17_Chr7g0273101 26.408 284 166 10 27 277 100 373 3.28e-19 86.3
Msa0778560 MtrunA17_Chr7g0228261 47.945 73 37 1 193 264 3 75 8.42e-19 79.3
Msa0778560 MtrunA17_Chr2g0301571 25.517 290 178 10 2 271 37 308 1.09e-18 84.3
Msa0778560 MtrunA17_Chr2g0301551 25.517 290 178 9 2 271 37 308 1.24e-18 84.0
Msa0778560 MtrunA17_Chr7g0226931 23.776 286 168 9 28 268 108 388 1.35e-18 84.7
Msa0778560 MtrunA17_Chr1g0159981 27.907 215 129 6 77 271 175 383 1.41e-18 84.7
Msa0778560 MtrunA17_Chr3g0104821 24.752 303 187 11 2 275 93 383 2.17e-18 84.0
Msa0778560 MtrunA17_Chr2g0301581 25.517 290 178 9 2 271 81 352 2.54e-18 83.6
Msa0778560 MtrunA17_Chr3g0112821 25.676 296 188 10 2 277 79 362 4.46e-18 83.2
Msa0778560 MtrunA17_Chr2g0301541 25.172 290 179 9 2 271 81 352 7.26e-18 82.4
Msa0778560 MtrunA17_Chr7g0275291 24.749 299 187 11 2 271 79 368 1.01e-17 82.0
Msa0778560 MtrunA17_Chr7g0254461 25.733 307 180 11 2 271 89 384 1.94e-17 81.6
Msa0778560 MtrunA17_Chr1g0191461 28.044 271 159 11 28 269 103 366 2.04e-17 81.3
Msa0778560 MtrunA17_Chr2g0283511 25.172 290 187 10 2 268 82 364 4.27e-17 80.5
Msa0778560 MtrunA17_Chr1g0189911 30.469 128 86 3 140 264 2 129 1.11e-16 75.5
Msa0778560 MtrunA17_Chr8g0347751 25.359 209 134 6 79 271 173 375 6.80e-16 77.0
Msa0778560 MtrunA17_Chr3g0104831 24.055 291 173 11 20 275 25 302 2.87e-15 74.3
Msa0778560 MtrunA17_Chr0c01g0489581 25.510 294 182 11 2 275 78 354 1.36e-14 72.8
Msa0778560 MtrunA17_Chr2g0308211 33.588 131 82 3 2 129 19 147 1.40e-14 69.7
Msa0778560 MtrunA17_Chr2g0317271 25.170 294 183 11 2 275 78 354 1.57e-14 72.8
Msa0778560 MtrunA17_Chr0c01g0489571 25.510 294 182 11 2 275 78 354 2.50e-14 72.0
Msa0778560 MtrunA17_Chr4g0018571 33.784 148 94 3 125 268 28 175 4.59e-14 68.9
Msa0778560 MtrunA17_Chr1g0178931 24.254 268 180 9 2 260 84 337 5.38e-14 71.2
Msa0778560 MtrunA17_Chr1g0198351 25.191 262 167 7 2 251 88 332 6.41e-14 70.9
Msa0778560 MtrunA17_Chr3g0112691 24.917 301 190 11 2 277 76 365 1.33e-13 70.1
Msa0778560 MtrunA17_Chr7g0266061 24.060 266 171 9 2 254 89 336 4.60e-13 68.6
Msa0778560 MtrunA17_Chr6g0469521 32.061 131 85 3 118 244 22 152 1.47e-12 63.9
Msa0778560 MtrunA17_Chr1g0178941 24.460 278 175 10 2 260 87 348 1.95e-12 66.6
Msa0778560 MtrunA17_Chr8g0339251 27.778 162 105 3 67 219 132 290 4.60e-12 65.5
Msa0778560 MtrunA17_Chr2g0285041 33.607 122 77 4 13 131 9 129 2.23e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778560 AT5G37690.2 73.077 260 70 0 4 263 72 331 5.68e-148 418
Msa0778560 AT5G37690.1 72.692 260 71 0 4 263 80 339 2.12e-147 417
Msa0778560 AT1G74460.1 43.007 286 153 3 4 279 76 361 2.78e-80 247
Msa0778560 AT1G71691.1 41.154 260 149 3 7 264 8 265 3.88e-67 210
Msa0778560 AT1G71691.2 40.909 264 152 3 4 265 106 367 3.63e-66 211
Msa0778560 AT5G15720.3 42.279 272 144 6 3 264 48 316 3.89e-65 207
Msa0778560 AT5G15720.1 41.852 270 150 4 2 264 78 347 4.71e-65 207
Msa0778560 AT2G23540.1 41.700 247 137 4 24 263 123 369 1.31e-63 204
Msa0778560 AT3G50400.1 39.630 270 154 6 3 263 87 356 1.15e-62 202
Msa0778560 AT1G29670.1 38.202 267 157 6 13 275 92 354 1.22e-62 201
Msa0778560 AT5G33370.1 36.742 264 164 3 4 264 82 345 5.29e-62 200
Msa0778560 AT1G29670.2 38.202 267 157 6 13 275 160 422 1.69e-61 200
Msa0778560 AT1G29660.1 38.550 262 154 5 13 269 92 351 1.89e-58 191
Msa0778560 AT1G71250.1 37.121 264 162 3 4 263 92 355 2.35e-58 191
Msa0778560 AT4G18970.1 38.281 256 151 5 25 275 99 352 6.42e-58 189
Msa0778560 AT4G18970.2 38.281 256 151 5 25 275 99 352 5.09e-57 188
Msa0778560 AT5G45670.1 37.295 244 148 4 25 263 100 343 8.63e-57 186
Msa0778560 AT3G04290.1 35.606 264 167 3 4 264 81 344 4.91e-55 182
Msa0778560 AT5G08460.1 35.185 270 168 4 2 264 99 368 5.87e-55 182
Msa0778560 AT1G33811.1 37.308 260 149 6 24 271 104 361 1.97e-53 178
Msa0778560 AT4G10950.2 33.083 266 175 2 2 264 121 386 2.86e-52 176
Msa0778560 AT4G10950.1 33.333 261 171 2 7 264 122 382 4.59e-51 172
Msa0778560 AT5G18430.1 34.211 266 170 4 4 264 80 345 1.63e-50 170
Msa0778560 AT5G41890.1 37.091 275 144 8 7 260 88 354 8.29e-50 169
Msa0778560 AT4G28780.1 34.286 245 158 2 23 264 102 346 1.17e-49 168
Msa0778560 AT2G42990.1 32.472 271 174 7 2 266 78 345 7.88e-49 165
Msa0778560 AT1G71691.3 40.865 208 120 2 4 210 106 311 5.64e-47 159
Msa0778560 AT2G04570.1 32.841 271 175 6 2 267 78 346 5.97e-45 155
Msa0778560 AT5G15720.2 39.535 215 124 3 2 210 78 292 1.05e-43 151
Msa0778560 AT5G03810.1 33.457 269 169 7 2 263 80 345 2.69e-43 151
Msa0778560 AT5G33370.2 34.928 209 134 2 4 210 82 290 5.12e-43 150
Msa0778560 AT4G26790.1 32.955 264 168 7 2 259 79 339 8.97e-43 149
Msa0778560 AT4G26790.2 32.955 264 168 7 2 259 79 339 8.97e-43 149
Msa0778560 AT2G19060.1 33.735 249 146 7 28 269 104 340 4.91e-42 147
Msa0778560 AT5G03820.1 33.456 272 166 8 2 263 83 349 1.05e-41 147
Msa0778560 AT5G42170.1 31.502 273 175 7 2 268 100 366 2.59e-41 146
Msa0778560 AT5G03820.2 33.456 272 166 8 2 263 111 377 3.47e-41 146
Msa0778560 AT2G19010.1 31.599 269 162 8 12 274 91 343 1.47e-39 141
Msa0778560 AT2G19050.1 32.129 249 148 8 28 269 105 339 2.10e-39 140
Msa0778560 AT2G19010.2 31.599 269 162 8 12 274 121 373 3.54e-39 140
Msa0778560 AT3G16370.1 34.066 273 168 8 4 268 82 350 1.53e-38 139
Msa0778560 AT1G75880.1 32.463 268 171 6 3 263 103 367 1.09e-37 137
Msa0778560 AT5G22810.1 34.420 276 163 10 2 265 84 353 1.55e-37 136
Msa0778560 AT1G75890.2 31.461 267 176 5 2 263 98 362 1.66e-37 136
Msa0778560 AT1G75890.3 31.461 267 176 5 2 263 127 391 2.56e-37 136
Msa0778560 AT1G75890.1 30.466 279 176 5 2 263 98 375 4.71e-37 135
Msa0778560 AT5G55050.1 32.787 244 151 7 24 260 118 355 6.15e-37 135
Msa0778560 AT1G20120.1 32.721 272 164 8 2 262 128 391 7.16e-37 135
Msa0778560 AT1G58430.1 31.395 258 167 5 4 254 88 342 1.88e-36 133
Msa0778560 AT2G30220.1 31.783 258 166 5 4 254 86 340 2.48e-36 133
Msa0778560 AT5G45950.1 29.963 267 180 5 2 266 90 351 3.51e-36 132
Msa0778560 AT1G75880.2 32.463 268 170 7 3 263 103 366 5.41e-36 132
Msa0778560 AT2G40250.1 29.242 277 181 6 2 267 86 358 5.69e-36 132
Msa0778560 AT2G30310.1 31.395 258 167 5 4 254 87 341 6.34e-36 132
Msa0778560 AT1G75900.1 30.268 261 174 6 4 259 95 352 7.65e-36 132
Msa0778560 AT4G16230.1 40.764 157 89 2 13 165 90 246 2.58e-34 125
Msa0778560 AT2G31540.1 29.889 271 164 7 4 259 88 347 2.64e-34 127
Msa0778560 AT1G20135.1 33.462 260 150 7 2 254 79 322 2.71e-34 127
Msa0778560 AT5G40990.1 31.298 262 157 7 28 277 114 364 2.81e-34 127
Msa0778560 AT3G53100.1 30.970 268 168 9 2 259 79 339 3.36e-34 127
Msa0778560 AT5G45960.1 30.142 282 168 10 2 269 97 363 1.08e-33 126
Msa0778560 AT3G14225.1 31.890 254 155 6 25 264 111 360 1.99e-33 125
Msa0778560 AT3G14225.2 31.746 252 154 6 25 264 111 356 4.09e-33 124
Msa0778560 AT2G24560.1 30.502 259 168 7 4 254 87 341 5.16e-33 124
Msa0778560 AT1G06990.1 27.106 273 189 6 2 267 87 356 1.52e-32 123
Msa0778560 AT3G14820.1 30.855 269 169 11 4 264 84 343 1.98e-32 122
Msa0778560 AT1G20130.2 29.577 284 176 9 2 266 234 512 3.52e-32 124
Msa0778560 AT1G20130.1 29.577 284 176 9 2 266 254 532 4.96e-32 124
Msa0778560 AT1G23500.1 32.061 262 152 8 13 266 97 340 1.48e-31 120
Msa0778560 AT1G59406.1 28.676 272 180 9 4 268 82 346 3.59e-31 119
Msa0778560 AT1G59030.1 28.676 272 180 9 4 268 82 346 3.59e-31 119
Msa0778560 AT1G58725.1 28.676 272 180 9 4 268 82 346 3.59e-31 119
Msa0778560 AT1G53990.1 28.058 278 175 8 2 260 72 343 4.42e-31 119
Msa0778560 AT4G30140.1 30.488 246 154 7 28 269 107 339 5.22e-31 118
Msa0778560 AT2G31550.1 29.493 217 129 5 59 261 2 208 2.90e-30 113
Msa0778560 AT5G63170.1 31.641 256 156 9 4 254 80 321 1.09e-29 115
Msa0778560 AT1G53940.2 28.520 277 175 7 13 277 101 366 1.76e-29 115
Msa0778560 AT2G03980.2 31.365 271 169 9 2 263 93 355 8.23e-29 113
Msa0778560 AT2G03980.3 31.365 271 169 9 2 263 93 355 8.23e-29 113
Msa0778560 AT2G03980.1 31.365 271 169 9 2 263 93 355 8.23e-29 113
Msa0778560 AT2G03980.4 31.365 271 169 9 2 263 93 355 8.23e-29 113
Msa0778560 AT1G73610.1 30.075 266 170 7 4 266 87 339 5.24e-27 107
Msa0778560 AT1G20132.1 27.306 271 182 8 2 263 111 375 8.17e-27 108
Msa0778560 AT1G75930.1 29.804 255 159 9 13 260 91 332 1.57e-26 106
Msa0778560 AT1G71120.1 25.207 242 165 7 28 264 111 341 1.89e-26 106
Msa0778560 AT4G16233.1 40.367 109 63 1 158 264 5 113 3.80e-26 100
Msa0778560 AT1G58520.3 27.574 272 176 10 4 268 82 339 5.11e-26 105
Msa0778560 AT1G58525.1 27.574 272 176 10 4 268 82 339 5.11e-26 105
Msa0778560 AT1G56670.1 31.336 217 126 6 71 272 157 365 1.41e-25 104
Msa0778560 AT1G75910.1 29.545 264 172 6 3 261 79 333 1.47e-25 103
Msa0778560 AT2G19050.2 33.721 172 104 5 28 196 105 269 2.72e-25 102
Msa0778560 AT1G53920.1 26.939 245 165 5 13 249 110 348 4.96e-25 103
Msa0778560 AT3G43570.1 26.866 268 161 8 4 268 82 317 5.93e-25 102
Msa0778560 AT1G09390.1 31.556 225 124 7 63 272 153 362 8.23e-24 99.8
Msa0778560 AT1G75920.4 28.625 269 177 7 3 266 52 310 2.04e-23 97.8
Msa0778560 AT1G54020.1 27.160 243 159 6 27 265 19 247 2.82e-23 96.7
Msa0778560 AT1G54020.5 27.160 243 159 6 27 265 19 247 2.82e-23 96.7
Msa0778560 AT1G54020.3 27.160 243 159 6 27 265 19 247 2.82e-23 96.7
Msa0778560 AT1G75920.2 28.625 269 177 7 3 266 80 338 5.35e-23 97.1
Msa0778560 AT1G75920.1 28.625 269 177 7 3 266 90 348 5.88e-23 97.1
Msa0778560 AT1G54020.2 26.336 262 168 7 15 265 86 333 5.92e-23 97.1
Msa0778560 AT1G54030.1 29.130 230 145 6 28 255 124 337 6.63e-23 97.4
Msa0778560 AT1G54000.1 28.629 248 154 8 27 265 108 341 2.60e-22 95.5
Msa0778560 AT1G54010.1 28.854 253 159 8 24 265 99 341 3.84e-22 95.1
Msa0778560 AT1G54020.4 29.167 192 130 4 78 265 9 198 4.34e-22 92.4
Msa0778560 AT2G24560.2 29.245 212 143 5 4 210 87 296 4.38e-21 91.3
Msa0778560 AT3G14210.1 29.032 248 153 7 27 265 110 343 9.84e-21 91.3
Msa0778560 AT1G54790.3 25.175 286 167 9 27 277 103 376 2.17e-20 90.1
Msa0778560 AT1G54790.1 25.175 286 167 9 27 277 102 375 2.28e-20 90.1
Msa0778560 AT1G53940.1 28.638 213 137 5 13 220 101 303 3.28e-20 88.6
Msa0778560 AT5G14450.1 26.246 301 183 10 2 271 87 379 1.02e-19 88.2
Msa0778560 AT1G28580.2 26.621 293 183 13 2 271 8 291 1.06e-19 87.4
Msa0778560 AT1G28580.1 26.621 293 183 13 2 271 89 372 3.07e-19 87.0
Msa0778560 AT3G14210.2 29.333 225 140 6 50 265 1 215 4.57e-19 84.7
Msa0778560 AT2G27360.1 26.027 292 187 10 2 271 85 369 6.87e-19 85.9
Msa0778560 AT1G75920.3 27.426 237 158 6 34 266 81 307 1.12e-18 84.3
Msa0778560 AT3G14220.1 25.806 248 163 8 25 264 102 336 1.94e-18 84.3
Msa0778560 AT3G05180.1 30.000 220 120 7 79 273 166 376 1.97e-18 84.7
Msa0778560 AT3G43550.1 27.830 212 141 7 4 210 82 286 4.21e-18 82.4
Msa0778560 AT3G48460.1 25.874 286 184 11 2 268 90 366 1.48e-17 82.0
Msa0778560 AT3G27950.1 25.735 272 164 7 28 271 102 363 1.58e-17 82.0
Msa0778560 AT5G45910.1 26.441 295 181 12 2 268 81 367 3.30e-17 80.9
Msa0778560 AT4G01130.3 23.832 214 137 3 79 271 79 287 5.78e-17 79.3
Msa0778560 AT1G67830.1 26.102 295 173 10 2 261 76 360 6.06e-17 80.1
Msa0778560 AT4G01130.1 23.832 214 137 3 79 271 165 373 1.12e-16 79.7
Msa0778560 AT1G28600.1 25.085 295 184 11 2 271 83 365 1.70e-16 79.0
Msa0778560 AT1G31550.2 25.424 295 183 9 2 271 88 370 1.87e-16 79.0
Msa0778560 AT3G62280.1 25.287 261 165 7 27 268 106 355 4.59e-16 77.8
Msa0778560 AT5G03610.1 23.239 284 188 9 2 269 90 359 3.68e-15 75.1
Msa0778560 AT1G28640.1 24.483 290 189 11 2 269 87 368 3.78e-15 75.1
Msa0778560 AT1G28610.2 24.823 282 179 11 2 260 83 354 5.13e-15 74.7
Msa0778560 AT1G56670.2 32.192 146 88 4 71 210 157 297 1.37e-14 72.8
Msa0778560 AT1G54030.2 28.261 184 115 5 28 209 124 292 3.75e-14 71.6
Msa0778560 AT3G09930.2 25.926 270 161 9 2 252 86 335 8.35e-14 70.9
Msa0778560 AT3G09930.1 25.926 270 161 9 2 252 86 335 8.35e-14 70.9
Msa0778560 AT3G26430.1 22.623 305 191 10 2 271 77 371 1.01e-13 70.9
Msa0778560 AT1G28660.2 24.080 299 187 14 2 276 87 369 1.42e-13 70.5
Msa0778560 AT1G31550.1 24.490 294 184 10 2 271 88 367 2.36e-13 70.1
Msa0778560 AT1G28590.1 24.068 295 188 12 2 271 88 371 6.01e-13 68.9
Msa0778560 AT2G04020.2 26.482 253 125 10 13 255 104 305 2.64e-12 66.2
Msa0778560 AT2G04020.1 29.655 145 92 4 13 154 104 241 8.21e-11 61.6

Find 44 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGGAATGAATATGTATTT+TGG 0.087334 5_2:-59094418 Msa0778560:CDS
TAATTTCTTGCAGCCGTTTA+TGG 0.179040 5_2:-59095029 Msa0778560:CDS
AGAAGCAATCACAGGAAAAT+TGG 0.218279 5_2:-59095243 Msa0778560:CDS
TACCTTAAGTTGTTGATCTA+AGG 0.241725 5_2:+59094955 None:intergenic
CTTTAAACATTGTCCTCGTT+TGG 0.294051 5_2:+59094765 None:intergenic
AATGTCGATGCCCTTCTTAA+AGG 0.305737 5_2:-59095460 Msa0778560:CDS
CCCAAAATACATATTCATTC+CGG 0.339117 5_2:+59094417 None:intergenic
ATGTCGATGCCCTTCTTAAA+GGG 0.339544 5_2:-59095459 Msa0778560:CDS
AATGAAGCCACATACTTCAT+TGG 0.342866 5_2:-59095194 Msa0778560:CDS
AACCTTAGATCAACAACTTA+AGG 0.379257 5_2:-59094957 Msa0778560:intron
ATGAAGCCACATACTTCATT+GGG 0.403535 5_2:-59095193 Msa0778560:CDS
GTTTAAAGCAAGTTAATGAA+TGG 0.410689 5_2:-59094750 Msa0778560:CDS
GAAGCAATCACAGGAAAATT+GGG 0.432117 5_2:-59095242 Msa0778560:CDS
CATAATTTACCCCTTTAAGA+AGG 0.440529 5_2:+59095449 None:intergenic
AAAGGGGTAAATTATGCATC+TGG 0.445959 5_2:-59095442 Msa0778560:CDS
ACTCATCATGAGTATATTGT+TGG 0.446312 5_2:+59094999 None:intergenic
ATCGATAATCCATCTACATA+TGG 0.448631 5_2:-59094619 Msa0778560:intron
GCCACATACTTCATTGGGAT+TGG 0.457148 5_2:-59095188 Msa0778560:intron
TGTTGGCCATCTGCCATAAA+CGG 0.464753 5_2:+59095016 None:intergenic
TTGCAGCCGTTTATGGCAGA+TGG 0.485530 5_2:-59095022 Msa0778560:CDS
TCGATTAAGTCAAGAACTAA+AGG 0.488857 5_2:+59094637 None:intergenic
TTGGATTTAACTCTTTGTGA+TGG 0.494538 5_2:+59094784 None:intergenic
TTGGGATGCATTTCATCCAT+CGG 0.499623 5_2:-59094399 Msa0778560:CDS
AATTATGCATCTGGTGGAGC+AGG 0.502570 5_2:-59095433 Msa0778560:CDS
TGAGGCACTGATAAATAAGC+TGG 0.518664 5_2:+59095484 None:intergenic
AATGTAGACACAAGCATTGG+AGG 0.524774 5_2:-59094473 Msa0778560:CDS
TTTCACGGACTTGGTCCACT+CGG 0.540757 5_2:-59094814 Msa0778560:CDS
TGCAATGTAGACACAAGCAT+TGG 0.545648 5_2:-59094476 Msa0778560:CDS
ATAATTTACCCCTTTAAGAA+GGG 0.545649 5_2:+59095450 None:intergenic
GAAGGACTAGGTGCTGCAGA+TGG 0.561603 5_2:+59094320 None:intergenic
ATAGCATTTGCTGCATCCGA+TGG 0.561842 5_2:+59094383 None:intergenic
TAAGTCAAGAACTAAAGGAT+AGG 0.566656 5_2:+59094642 None:intergenic
ACCAATCCCAATGAAGTATG+TGG 0.567868 5_2:+59095187 None:intergenic
AAAACTAAAGAAGCAATCAC+AGG 0.588868 5_2:-59095251 Msa0778560:CDS
TGTCGATGCCCTTCTTAAAG+GGG 0.611078 5_2:-59095458 Msa0778560:CDS
GGGGTAAATTATGCATCTGG+TGG 0.613940 5_2:-59095439 Msa0778560:CDS
AGCAGGAATTCTCAATGACA+CGG 0.627462 5_2:-59095416 Msa0778560:CDS
CTAATCATCAAACTAAACCA+TGG 0.634969 5_2:-59094697 Msa0778560:CDS
TACCAGAGACTGTATCAGCT+AGG 0.639509 5_2:-59094853 Msa0778560:intron
TTGATGTATGAGAAATTAGG+GGG 0.649925 5_2:+59094298 None:intergenic
GCAGGAATTCTCAATGACAC+GGG 0.662694 5_2:-59095415 Msa0778560:CDS
CAAAGAGTTAAATCCAAACG+AGG 0.700821 5_2:-59094778 Msa0778560:CDS
GGCACTGATAAATAAGCTGG+TGG 0.727847 5_2:+59095487 None:intergenic
TGTGATGGAATACAACCGAG+TGG 0.734121 5_2:+59094799 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATCTTAAGCATAATGTA+AGG + chr5_2:59095258-59095277 None:intergenic 20.0%
!! ATAATCTTAAGCATAATGTA+AGG + chr5_2:59095258-59095277 None:intergenic 20.0%
!! ATAATTTACCCCTTTAAGAA+GGG + chr5_2:59094386-59094405 None:intergenic 25.0%
!! GTTTAAAGCAAGTTAATGAA+TGG - chr5_2:59095083-59095102 Msa0778560:intron 25.0%
!! GAAATTTTACCATATGTAGA+TGG + chr5_2:59095226-59095245 None:intergenic 25.0%
!!! TTTTTGCATAACTTTGAGTT+TGG + chr5_2:59095396-59095415 None:intergenic 25.0%
!! ATAATTTACCCCTTTAAGAA+GGG + chr5_2:59094386-59094405 None:intergenic 25.0%
!! GTTTAAAGCAAGTTAATGAA+TGG - chr5_2:59095083-59095102 Msa0778560:intron 25.0%
!! GAAATTTTACCATATGTAGA+TGG + chr5_2:59095226-59095245 None:intergenic 25.0%
!!! TTTTTGCATAACTTTGAGTT+TGG + chr5_2:59095396-59095415 None:intergenic 25.0%
! CATAATTTACCCCTTTAAGA+AGG + chr5_2:59094387-59094406 None:intergenic 30.0%
AAAACTAAAGAAGCAATCAC+AGG - chr5_2:59094582-59094601 Msa0778560:intron 30.0%
CTAGTAAACTACATTTATGC+AGG - chr5_2:59094763-59094782 Msa0778560:CDS 30.0%
ACTCATCATGAGTATATTGT+TGG + chr5_2:59094837-59094856 None:intergenic 30.0%
AACCTTAGATCAACAACTTA+AGG - chr5_2:59094876-59094895 Msa0778560:intron 30.0%
! TACCTTAAGTTGTTGATCTA+AGG + chr5_2:59094881-59094900 None:intergenic 30.0%
! GCACAAAAAATGGTTTTTCA+CGG - chr5_2:59095004-59095023 Msa0778560:CDS 30.0%
TTGGATTTAACTCTTTGTGA+TGG + chr5_2:59095052-59095071 None:intergenic 30.0%
CTAATCATCAAACTAAACCA+TGG - chr5_2:59095136-59095155 Msa0778560:intron 30.0%
TAAGTCAAGAACTAAAGGAT+AGG + chr5_2:59095194-59095213 None:intergenic 30.0%
TCGATTAAGTCAAGAACTAA+AGG + chr5_2:59095199-59095218 None:intergenic 30.0%
ATCGATAATCCATCTACATA+TGG - chr5_2:59095214-59095233 Msa0778560:CDS 30.0%
! TTTTGTTGCTGTATTTCAAC+AGG - chr5_2:59095309-59095328 Msa0778560:intron 30.0%
ACTCAAAGTTATGCAAAAAC+CGG - chr5_2:59095397-59095416 Msa0778560:intron 30.0%
! ACCGGAATGAATATGTATTT+TGG - chr5_2:59095415-59095434 Msa0778560:CDS 30.0%
CCCAAAATACATATTCATTC+CGG + chr5_2:59095419-59095438 None:intergenic 30.0%
! CCGGAATGAATATGTATTTT+GGG - chr5_2:59095416-59095435 Msa0778560:CDS 30.0%
! CATAATTTACCCCTTTAAGA+AGG + chr5_2:59094387-59094406 None:intergenic 30.0%
AAAACTAAAGAAGCAATCAC+AGG - chr5_2:59094582-59094601 Msa0778560:intron 30.0%
CTAGTAAACTACATTTATGC+AGG - chr5_2:59094763-59094782 Msa0778560:CDS 30.0%
ACTCATCATGAGTATATTGT+TGG + chr5_2:59094837-59094856 None:intergenic 30.0%
AACCTTAGATCAACAACTTA+AGG - chr5_2:59094876-59094895 Msa0778560:intron 30.0%
! TACCTTAAGTTGTTGATCTA+AGG + chr5_2:59094881-59094900 None:intergenic 30.0%
! GCACAAAAAATGGTTTTTCA+CGG - chr5_2:59095004-59095023 Msa0778560:CDS 30.0%
TTGGATTTAACTCTTTGTGA+TGG + chr5_2:59095052-59095071 None:intergenic 30.0%
CTAATCATCAAACTAAACCA+TGG - chr5_2:59095136-59095155 Msa0778560:intron 30.0%
TAAGTCAAGAACTAAAGGAT+AGG + chr5_2:59095194-59095213 None:intergenic 30.0%
TCGATTAAGTCAAGAACTAA+AGG + chr5_2:59095199-59095218 None:intergenic 30.0%
ATCGATAATCCATCTACATA+TGG - chr5_2:59095214-59095233 Msa0778560:CDS 30.0%
! TTTTGTTGCTGTATTTCAAC+AGG - chr5_2:59095309-59095328 Msa0778560:intron 30.0%
ACTCAAAGTTATGCAAAAAC+CGG - chr5_2:59095397-59095416 Msa0778560:intron 30.0%
! ACCGGAATGAATATGTATTT+TGG - chr5_2:59095415-59095434 Msa0778560:CDS 30.0%
CCCAAAATACATATTCATTC+CGG + chr5_2:59095419-59095438 None:intergenic 30.0%
! CCGGAATGAATATGTATTTT+GGG - chr5_2:59095416-59095435 Msa0778560:CDS 30.0%
AAAGGGGTAAATTATGCATC+TGG - chr5_2:59094391-59094410 Msa0778560:CDS 35.0%
AGAAGCAATCACAGGAAAAT+TGG - chr5_2:59094590-59094609 Msa0778560:intron 35.0%
GAAGCAATCACAGGAAAATT+GGG - chr5_2:59094591-59094610 Msa0778560:intron 35.0%
AATGAAGCCACATACTTCAT+TGG - chr5_2:59094639-59094658 Msa0778560:CDS 35.0%
ATGAAGCCACATACTTCATT+GGG - chr5_2:59094640-59094659 Msa0778560:CDS 35.0%
TAATTTCTTGCAGCCGTTTA+TGG - chr5_2:59094804-59094823 Msa0778560:CDS 35.0%
ATCATGAGTAGTTCAGTTCT+TGG + chr5_2:59094921-59094940 None:intergenic 35.0%
! AAAATGGTTTTTCACGGACT+TGG - chr5_2:59095010-59095029 Msa0778560:CDS 35.0%
CAAAGAGTTAAATCCAAACG+AGG - chr5_2:59095055-59095074 Msa0778560:intron 35.0%
CTTTAAACATTGTCCTCGTT+TGG + chr5_2:59095071-59095090 None:intergenic 35.0%
! GCAAAGACAAGTTTTGCATT+TGG + chr5_2:59095166-59095185 None:intergenic 35.0%
GCATAATGTAAGGCTTAATG+TGG + chr5_2:59095248-59095267 None:intergenic 35.0%
AAAGGGGTAAATTATGCATC+TGG - chr5_2:59094391-59094410 Msa0778560:CDS 35.0%
AGAAGCAATCACAGGAAAAT+TGG - chr5_2:59094590-59094609 Msa0778560:intron 35.0%
GAAGCAATCACAGGAAAATT+GGG - chr5_2:59094591-59094610 Msa0778560:intron 35.0%
AATGAAGCCACATACTTCAT+TGG - chr5_2:59094639-59094658 Msa0778560:CDS 35.0%
ATGAAGCCACATACTTCATT+GGG - chr5_2:59094640-59094659 Msa0778560:CDS 35.0%
TAATTTCTTGCAGCCGTTTA+TGG - chr5_2:59094804-59094823 Msa0778560:CDS 35.0%
ATCATGAGTAGTTCAGTTCT+TGG + chr5_2:59094921-59094940 None:intergenic 35.0%
! AAAATGGTTTTTCACGGACT+TGG - chr5_2:59095010-59095029 Msa0778560:CDS 35.0%
CAAAGAGTTAAATCCAAACG+AGG - chr5_2:59095055-59095074 Msa0778560:intron 35.0%
CTTTAAACATTGTCCTCGTT+TGG + chr5_2:59095071-59095090 None:intergenic 35.0%
! GCAAAGACAAGTTTTGCATT+TGG + chr5_2:59095166-59095185 None:intergenic 35.0%
GCATAATGTAAGGCTTAATG+TGG + chr5_2:59095248-59095267 None:intergenic 35.0%
! CATTTTGCAGCATCAAAGCT+TGG - chr5_2:59094313-59094332 Msa0778560:CDS 40.0%
!! TGAGGCACTGATAAATAAGC+TGG + chr5_2:59094352-59094371 None:intergenic 40.0%
AATGTCGATGCCCTTCTTAA+AGG - chr5_2:59094373-59094392 Msa0778560:CDS 40.0%
ATGTCGATGCCCTTCTTAAA+GGG - chr5_2:59094374-59094393 Msa0778560:CDS 40.0%
AGCAGGAATTCTCAATGACA+CGG - chr5_2:59094417-59094436 Msa0778560:CDS 40.0%
ACCAATCCCAATGAAGTATG+TGG + chr5_2:59094649-59094668 None:intergenic 40.0%
! TCAGCTAGGAGCACAAAAAA+TGG - chr5_2:59094994-59095013 Msa0778560:CDS 40.0%
! GTTTTGCATTTGGAAGACCA+TGG + chr5_2:59095156-59095175 None:intergenic 40.0%
TGCAATGTAGACACAAGCAT+TGG - chr5_2:59095357-59095376 Msa0778560:intron 40.0%
!! AATGTAGACACAAGCATTGG+AGG - chr5_2:59095360-59095379 Msa0778560:intron 40.0%
TTGGGATGCATTTCATCCAT+CGG - chr5_2:59095434-59095453 Msa0778560:CDS 40.0%
! CATTTTGCAGCATCAAAGCT+TGG - chr5_2:59094313-59094332 Msa0778560:CDS 40.0%
!! TGAGGCACTGATAAATAAGC+TGG + chr5_2:59094352-59094371 None:intergenic 40.0%
AATGTCGATGCCCTTCTTAA+AGG - chr5_2:59094373-59094392 Msa0778560:CDS 40.0%
ATGTCGATGCCCTTCTTAAA+GGG - chr5_2:59094374-59094393 Msa0778560:CDS 40.0%
AGCAGGAATTCTCAATGACA+CGG - chr5_2:59094417-59094436 Msa0778560:CDS 40.0%
ACCAATCCCAATGAAGTATG+TGG + chr5_2:59094649-59094668 None:intergenic 40.0%
! TCAGCTAGGAGCACAAAAAA+TGG - chr5_2:59094994-59095013 Msa0778560:CDS 40.0%
! GTTTTGCATTTGGAAGACCA+TGG + chr5_2:59095156-59095175 None:intergenic 40.0%
TGCAATGTAGACACAAGCAT+TGG - chr5_2:59095357-59095376 Msa0778560:intron 40.0%
!! AATGTAGACACAAGCATTGG+AGG - chr5_2:59095360-59095379 Msa0778560:intron 40.0%
TTGGGATGCATTTCATCCAT+CGG - chr5_2:59095434-59095453 Msa0778560:CDS 40.0%
!! GGCACTGATAAATAAGCTGG+TGG + chr5_2:59094349-59094368 None:intergenic 45.0%
!!! AGAAGGGCATCGACATTTTG+AGG + chr5_2:59094370-59094389 None:intergenic 45.0%
TGTCGATGCCCTTCTTAAAG+GGG - chr5_2:59094375-59094394 Msa0778560:CDS 45.0%
GGGGTAAATTATGCATCTGG+TGG - chr5_2:59094394-59094413 Msa0778560:CDS 45.0%
AATTATGCATCTGGTGGAGC+AGG - chr5_2:59094400-59094419 Msa0778560:CDS 45.0%
GCAGGAATTCTCAATGACAC+GGG - chr5_2:59094418-59094437 Msa0778560:CDS 45.0%
GCCACATACTTCATTGGGAT+TGG - chr5_2:59094645-59094664 Msa0778560:CDS 45.0%
TGTTGGCCATCTGCCATAAA+CGG + chr5_2:59094820-59094839 None:intergenic 45.0%
TACCAGAGACTGTATCAGCT+AGG - chr5_2:59094980-59094999 Msa0778560:CDS 45.0%
! TGTGATGGAATACAACCGAG+TGG + chr5_2:59095037-59095056 None:intergenic 45.0%
! ATAGCATTTGCTGCATCCGA+TGG + chr5_2:59095453-59095472 None:intergenic 45.0%
!! GGCACTGATAAATAAGCTGG+TGG + chr5_2:59094349-59094368 None:intergenic 45.0%
!!! AGAAGGGCATCGACATTTTG+AGG + chr5_2:59094370-59094389 None:intergenic 45.0%
TGTCGATGCCCTTCTTAAAG+GGG - chr5_2:59094375-59094394 Msa0778560:CDS 45.0%
GGGGTAAATTATGCATCTGG+TGG - chr5_2:59094394-59094413 Msa0778560:CDS 45.0%
AATTATGCATCTGGTGGAGC+AGG - chr5_2:59094400-59094419 Msa0778560:CDS 45.0%
GCAGGAATTCTCAATGACAC+GGG - chr5_2:59094418-59094437 Msa0778560:CDS 45.0%
GCCACATACTTCATTGGGAT+TGG - chr5_2:59094645-59094664 Msa0778560:CDS 45.0%
TGTTGGCCATCTGCCATAAA+CGG + chr5_2:59094820-59094839 None:intergenic 45.0%
TACCAGAGACTGTATCAGCT+AGG - chr5_2:59094980-59094999 Msa0778560:CDS 45.0%
! TGTGATGGAATACAACCGAG+TGG + chr5_2:59095037-59095056 None:intergenic 45.0%
! ATAGCATTTGCTGCATCCGA+TGG + chr5_2:59095453-59095472 None:intergenic 45.0%
TTGCAGCCGTTTATGGCAGA+TGG - chr5_2:59094811-59094830 Msa0778560:CDS 50.0%
CTCCTAGCTGATACAGTCTC+TGG + chr5_2:59094985-59095004 None:intergenic 50.0%
! TTTCACGGACTTGGTCCACT+CGG - chr5_2:59095019-59095038 Msa0778560:CDS 50.0%
TTGCAGCCGTTTATGGCAGA+TGG - chr5_2:59094811-59094830 Msa0778560:CDS 50.0%
CTCCTAGCTGATACAGTCTC+TGG + chr5_2:59094985-59095004 None:intergenic 50.0%
! TTTCACGGACTTGGTCCACT+CGG - chr5_2:59095019-59095038 Msa0778560:CDS 50.0%
! GAAGGACTAGGTGCTGCAGA+TGG + chr5_2:59095516-59095535 None:intergenic 55.0%
! GAAGGACTAGGTGCTGCAGA+TGG + chr5_2:59095516-59095535 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 59094313 59095542 59094313 ID=Msa0778560;Name=Msa0778560
chr5_2 mRNA 59094313 59095542 59094313 ID=Msa0778560-mRNA-1;Parent=Msa0778560;Name=Msa0778560-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|0.2|1|1|1|5|0|279
chr5_2 exon 59094313 59094524 59094313 ID=Msa0778560-mRNA-1:exon:17455;Parent=Msa0778560-mRNA-1
chr5_2 exon 59094620 59094869 59094620 ID=Msa0778560-mRNA-1:exon:17454;Parent=Msa0778560-mRNA-1
chr5_2 exon 59094958 59095070 59094958 ID=Msa0778560-mRNA-1:exon:17453;Parent=Msa0778560-mRNA-1
chr5_2 exon 59095189 59095315 59095189 ID=Msa0778560-mRNA-1:exon:17452;Parent=Msa0778560-mRNA-1
chr5_2 exon 59095405 59095542 59095405 ID=Msa0778560-mRNA-1:exon:17451;Parent=Msa0778560-mRNA-1
chr5_2 CDS 59095405 59095542 59095405 ID=Msa0778560-mRNA-1:cds;Parent=Msa0778560-mRNA-1
chr5_2 CDS 59095189 59095315 59095189 ID=Msa0778560-mRNA-1:cds;Parent=Msa0778560-mRNA-1
chr5_2 CDS 59094958 59095070 59094958 ID=Msa0778560-mRNA-1:cds;Parent=Msa0778560-mRNA-1
chr5_2 CDS 59094620 59094869 59094620 ID=Msa0778560-mRNA-1:cds;Parent=Msa0778560-mRNA-1
chr5_2 CDS 59094313 59094524 59094313 ID=Msa0778560-mRNA-1:cds;Parent=Msa0778560-mRNA-1
Gene Sequence

>Msa0778560

CATTTTGCAGCATCAAAGCTTGGAATTCAATCACCACCAGCTTATTTATCAGTGCCTCAAAATGTCGATGCCCTTCTTAAAGGGGTAAATTATGCATCTGGTGGAGCAGGAATTCTCAATGACACGGGACTTTACTTTATTCAGAGACTGACTCTTGATGATCAAATAGAAAGTTTCAAGAAAACTAAAGAAGCAATCACAGGAAAATTGGGTGAAGCTGCTGCTAACAAGCATTTCAATGAAGCCACATACTTCATTGGGATTGGCAGCAATGATTATGTCAATAATTTCTTGCAGCCGTTTATGGCAGATGGCCAACAATATACTCATGATGAGTTCATAGAGCTCTTAATCTCAACCTTAGATCAACAACTTAAGAGACTGTATCAGCTAGGAGCACAAAAAATGGTTTTTCACGGACTTGGTCCACTCGGTTGTATTCCATCACAAAGAGTTAAATCCAAACGAGGACAATGTTTAAAGCAAGTTAATGAATGGATTCAACAATTCAACTCAAAAGTACAGAAGCTAATCATCAAACTAAACCATGGTCTTCCAAATGCAAAACTTGTCTTTGCAGACACCTATCCTTTAGTTCTTGACTTAATCGATAATCCATCTACATATGGTTTTAAAGTTTCAAATACATCTTGTTGCAATGTAGACACAAGCATTGGAGGTTTATGCTTACCAAACTCAAAGTTATGCAAAAACCGGAATGAATATGTATTTTGGGATGCATTTCATCCATCGGATGCAGCAAATGCTATTCTAGCAGAGAAATTCTTCTCTAGTCTTTTCTCATCAGCTCCATCTGCAGCACCTAGTCCTTCCCCCTAA
Protein sequence

>Msa0778560

HFAASKLGIQSPPAYLSVPQNVDALLKGVNYASGGAGILNDTGLYFIQRLTLDDQIESFKKTKEAITGKLGEAAANKHFNEATYFIGIGSNDYVNNFLQPFMADGQQYTHDEFIELLISTLDQQLKRLYQLGAQKMVFHGLGPLGCIPSQRVKSKRGQCLKQVNEWIQQFNSKVQKLIIKLNHGLPNAKLVFADTYPLVLDLIDNPSTYGFKVSNTSCCNVDTSIGGLCLPNSKLCKNRNEYVFWDAFHPSDAANAILAEKFFSSLFSSAPSAAPSPSP*