AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0815930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815930 MtrunA17_Chr5g0434621 96.739 276 9 0 4 279 78 353 0.0 551
Msa0815930 MtrunA17_Chr3g0092131 45.848 277 146 4 7 279 79 355 4.78e-83 253
Msa0815930 MtrunA17_Chr4g0060811 46.332 259 137 2 7 263 83 341 1.05e-79 245
Msa0815930 MtrunA17_Chr3g0077571 41.221 262 151 2 4 264 81 340 1.03e-69 219
Msa0815930 MtrunA17_Chr8g0380041 41.085 258 145 6 13 265 91 346 8.45e-66 209
Msa0815930 MtrunA17_Chr4g0068441 40.580 276 155 4 6 275 87 359 1.47e-65 209
Msa0815930 MtrunA17_Chr7g0274991 38.783 263 158 3 4 263 85 347 2.62e-65 208
Msa0815930 MtrunA17_Chr2g0294301 39.773 264 153 3 7 264 88 351 3.03e-63 203
Msa0815930 MtrunA17_Chr7g0275011 37.970 266 162 3 2 264 84 349 4.72e-62 200
Msa0815930 MtrunA17_Chr2g0294311 38.550 262 157 2 6 263 94 355 5.84e-62 199
Msa0815930 MtrunA17_Chr4g0008851 38.346 266 159 4 4 264 84 349 8.57e-62 199
Msa0815930 MtrunA17_Chr3g0086641 37.143 245 150 3 25 265 109 353 2.09e-61 198
Msa0815930 MtrunA17_Chr4g0017431 35.606 264 166 3 2 261 80 343 3.42e-61 197
Msa0815930 MtrunA17_Chr2g0285061 36.719 256 155 6 25 275 103 356 1.30e-59 193
Msa0815930 MtrunA17_Chr1g0189901 36.226 265 166 3 2 263 81 345 6.29e-59 192
Msa0815930 MtrunA17_Chr7g0275021 36.742 264 164 3 4 264 86 349 1.17e-58 191
Msa0815930 MtrunA17_Chr8g0374101 38.462 247 145 4 24 263 112 358 1.66e-58 191
Msa0815930 MtrunA17_Chr6g0457921 37.121 264 163 3 4 264 82 345 1.53e-57 188
Msa0815930 MtrunA17_Chr7g0275001 37.405 262 160 3 6 263 79 340 8.53e-57 186
Msa0815930 MtrunA17_Chr1g0189931 35.606 264 167 3 4 264 84 347 3.59e-56 184
Msa0815930 MtrunA17_Chr1g0182811 37.643 263 159 5 7 264 88 350 3.43e-55 182
Msa0815930 MtrunA17_Chr7g0215961 34.717 265 170 3 3 264 71 335 8.60e-55 181
Msa0815930 MtrunA17_Chr5g0396511 34.586 266 171 2 2 264 96 361 1.38e-52 176
Msa0815930 MtrunA17_Chr3g0131321 33.955 268 171 5 2 264 86 352 8.85e-51 171
Msa0815930 MtrunA17_Chr3g0077581 36.466 266 157 6 18 271 96 361 1.14e-50 170
Msa0815930 MtrunA17_Chr2g0284921 37.500 248 144 6 25 268 106 346 1.59e-47 162
Msa0815930 MtrunA17_Chr5g0444401 32.491 277 175 5 2 269 79 352 2.85e-47 161
Msa0815930 MtrunA17_Chr5g0438621 33.700 273 174 6 2 269 80 350 1.50e-46 159
Msa0815930 MtrunA17_Chr3g0085881 37.037 243 142 5 25 265 103 336 2.90e-46 158
Msa0815930 MtrunA17_Chr1g0189891 34.831 267 161 7 3 264 81 339 6.32e-46 158
Msa0815930 MtrunA17_Chr3g0099161 32.384 281 175 5 4 277 145 417 1.36e-45 158
Msa0815930 MtrunA17_Chr3g0099231 30.249 281 180 6 4 277 81 352 2.55e-45 157
Msa0815930 MtrunA17_Chr5g0438641 32.576 264 171 6 2 260 82 343 5.50e-45 155
Msa0815930 MtrunA17_Chr6g0459921 34.649 228 145 4 48 271 125 352 1.42e-44 154
Msa0815930 MtrunA17_Chr3g0099151 32.482 274 164 7 4 264 140 405 4.61e-44 154
Msa0815930 MtrunA17_Chr6g0455661 34.513 226 144 4 50 271 238 463 2.05e-43 154
Msa0815930 MtrunA17_Chr5g0438631 31.752 274 179 6 2 269 78 349 8.56e-43 149
Msa0815930 MtrunA17_Chr3g0120861 31.939 263 172 5 2 259 88 348 2.69e-42 148
Msa0815930 MtrunA17_Chr2g0284991 34.694 245 150 6 25 265 104 342 1.22e-41 147
Msa0815930 MtrunA17_Chr2g0320671 33.088 272 169 8 2 265 80 346 1.76e-41 146
Msa0815930 MtrunA17_Chr3g0105401 31.873 251 166 4 13 259 90 339 2.86e-41 145
Msa0815930 MtrunA17_Chr1g0156911 33.077 260 168 5 4 259 89 346 2.56e-40 143
Msa0815930 MtrunA17_Chr2g0301641 33.463 257 149 7 28 272 118 364 2.69e-40 144
Msa0815930 MtrunA17_Chr2g0285001 34.400 250 152 6 21 265 101 343 8.27e-40 142
Msa0815930 MtrunA17_Chr5g0405821 35.316 269 159 9 4 263 97 359 1.05e-39 141
Msa0815930 MtrunA17_Chr8g0370951 30.620 258 171 3 10 260 91 347 3.10e-39 140
Msa0815930 MtrunA17_Chr2g0284951 35.102 245 145 7 25 265 104 338 1.41e-38 139
Msa0815930 MtrunA17_Chr3g0142921 32.296 257 168 5 2 254 87 341 1.54e-38 138
Msa0815930 MtrunA17_Chr8g0341001 33.333 270 166 8 2 262 82 346 1.97e-38 138
Msa0815930 MtrunA17_Chr5g0405831 35.115 262 161 7 4 259 96 354 1.46e-37 136
Msa0815930 MtrunA17_Chr8g0380031 31.783 258 153 6 25 278 155 393 1.61e-37 137
Msa0815930 MtrunA17_Chr8g0370961 33.043 230 140 6 42 264 6 228 2.29e-37 132
Msa0815930 MtrunA17_Chr2g0330781 32.453 265 167 7 4 260 83 343 2.98e-37 135
Msa0815930 MtrunA17_Chr8g0371471 32.061 262 167 8 7 261 96 353 3.79e-37 135
Msa0815930 MtrunA17_Chr5g0432101 30.075 266 177 6 2 260 83 346 1.07e-36 134
Msa0815930 MtrunA17_Chr1g0156921 31.128 257 166 6 4 253 94 346 6.02e-36 131
Msa0815930 MtrunA17_Chr1g0156931 30.859 256 168 6 4 254 93 344 8.55e-36 131
Msa0815930 MtrunA17_Chr1g0156891 30.916 262 165 7 2 254 94 348 9.03e-36 131
Msa0815930 MtrunA17_Chr3g0142941 30.888 259 165 7 4 254 99 351 9.11e-35 129
Msa0815930 MtrunA17_Chr4g0027521 29.670 273 178 7 2 264 77 345 1.00e-34 128
Msa0815930 MtrunA17_Chr2g0284941 32.787 244 135 6 25 265 104 321 1.86e-34 127
Msa0815930 MtrunA17_Chr8g0371481 30.418 263 171 8 7 261 96 354 2.21e-34 127
Msa0815930 MtrunA17_Chr1g0156901 30.739 257 172 5 2 254 100 354 3.60e-34 127
Msa0815930 MtrunA17_Chr8g0344931 31.667 240 150 5 26 260 110 340 6.12e-34 126
Msa0815930 MtrunA17_Chr5g0440501 28.384 229 145 5 51 265 10 233 7.22e-34 123
Msa0815930 MtrunA17_Chr3g0085231 30.855 269 162 7 4 264 82 334 8.67e-34 125
Msa0815930 MtrunA17_Chr8g0371491 31.061 264 173 7 2 259 86 346 9.84e-34 125
Msa0815930 MtrunA17_Chr8g0344941 30.657 274 171 8 2 264 92 357 1.27e-33 125
Msa0815930 MtrunA17_Chr5g0420811 30.072 276 177 8 2 273 83 346 5.54e-32 120
Msa0815930 MtrunA17_Chr8g0349341 27.419 248 162 5 26 264 110 348 7.10e-29 112
Msa0815930 MtrunA17_Chr2g0283191 27.778 270 173 9 2 254 88 352 2.77e-28 111
Msa0815930 MtrunA17_Chr8g0349321 27.823 248 161 5 26 264 110 348 7.84e-28 110
Msa0815930 MtrunA17_Chr4g0046151 29.151 271 166 11 2 254 86 348 7.39e-27 107
Msa0815930 MtrunA17_Chr1g0157001 29.851 268 168 6 4 260 88 346 2.12e-25 103
Msa0815930 MtrunA17_Chr1g0160101 30.126 239 141 8 55 271 146 380 2.60e-25 103
Msa0815930 MtrunA17_Chr4g0027571 30.660 212 140 5 54 260 2 211 5.97e-25 99.4
Msa0815930 MtrunA17_Chr6g0450731 28.682 258 165 6 28 271 102 354 9.22e-25 101
Msa0815930 MtrunA17_Chr5g0437421 28.364 275 169 8 2 258 82 346 2.26e-24 100
Msa0815930 MtrunA17_Chr6g0450721 29.771 262 148 8 28 268 103 349 2.10e-23 97.8
Msa0815930 MtrunA17_Chr8g0370981 25.649 308 166 8 10 263 103 401 7.03e-23 97.1
Msa0815930 MtrunA17_Chr7g0271551 29.707 239 141 8 50 269 125 355 3.56e-22 94.7
Msa0815930 MtrunA17_Chr1g0160031 27.306 271 165 8 28 271 109 374 4.57e-22 94.4
Msa0815930 MtrunA17_Chr8g0349301 27.363 201 134 3 22 219 105 296 7.79e-22 92.8
Msa0815930 MtrunA17_Chr1g0159971 28.216 241 143 7 55 271 150 384 8.27e-22 94.0
Msa0815930 MtrunA17_Chr2g0284931 27.064 218 134 5 50 265 8 202 1.37e-21 90.5
Msa0815930 MtrunA17_Chr6g0450711 28.904 301 169 10 2 271 168 454 2.12e-21 93.2
Msa0815930 MtrunA17_Chr4g0057991 25.862 290 183 10 2 271 91 368 3.94e-21 91.7
Msa0815930 MtrunA17_Chr7g0226941 28.808 302 168 12 2 268 79 368 6.84e-21 91.3
Msa0815930 MtrunA17_Chr1g0159991 26.740 273 166 9 28 271 106 373 9.25e-21 90.9
Msa0815930 MtrunA17_Chr1g0160011 26.568 271 167 9 28 271 110 375 1.73e-20 90.1
Msa0815930 MtrunA17_Chr6g0450701 27.723 303 170 11 2 271 85 371 2.17e-20 89.7
Msa0815930 MtrunA17_Chr2g0283481 26.596 282 175 9 2 260 98 370 3.66e-20 89.4
Msa0815930 MtrunA17_Chr8g0352901 26.642 274 165 7 28 271 98 365 6.62e-20 88.2
Msa0815930 MtrunA17_Chr7g0226911 23.529 306 189 11 2 271 81 377 1.45e-19 87.4
Msa0815930 MtrunA17_Chr7g0229581 35.766 137 84 3 128 260 8 144 1.83e-19 83.2
Msa0815930 MtrunA17_Chr7g0273101 26.408 284 166 10 27 277 100 373 2.47e-19 86.7
Msa0815930 MtrunA17_Chr8g0349331 26.630 184 126 3 90 264 133 316 3.92e-19 85.5
Msa0815930 MtrunA17_Chr8g0381581 24.918 305 184 11 2 271 86 380 4.19e-19 86.3
Msa0815930 MtrunA17_Chr7g0228261 47.945 73 37 1 193 264 3 75 7.83e-19 79.3
Msa0815930 MtrunA17_Chr2g0301571 25.517 290 178 10 2 271 37 308 1.03e-18 84.3
Msa0815930 MtrunA17_Chr2g0301551 25.517 290 178 9 2 271 37 308 1.32e-18 84.0
Msa0815930 MtrunA17_Chr2g0301581 25.517 290 178 9 2 271 81 352 2.42e-18 84.0
Msa0815930 MtrunA17_Chr1g0159981 26.182 275 165 10 28 271 116 383 3.60e-18 83.6
Msa0815930 MtrunA17_Chr7g0254461 26.059 307 179 11 2 271 89 384 3.63e-18 83.6
Msa0815930 MtrunA17_Chr7g0226931 23.427 286 169 9 28 268 108 388 4.08e-18 83.6
Msa0815930 MtrunA17_Chr3g0104821 24.422 303 188 11 2 275 93 383 5.87e-18 82.8
Msa0815930 MtrunA17_Chr2g0301541 25.172 290 179 9 2 271 81 352 7.40e-18 82.4
Msa0815930 MtrunA17_Chr3g0112821 25.676 296 188 10 2 277 79 362 7.91e-18 82.4
Msa0815930 MtrunA17_Chr7g0275291 24.749 299 187 11 2 271 79 368 1.14e-17 82.0
Msa0815930 MtrunA17_Chr1g0191461 28.044 271 159 11 28 269 103 366 1.57e-17 81.6
Msa0815930 MtrunA17_Chr1g0189911 30.469 128 86 3 140 264 2 129 9.88e-17 75.5
Msa0815930 MtrunA17_Chr2g0283511 24.483 290 189 10 2 268 82 364 4.29e-16 77.4
Msa0815930 MtrunA17_Chr8g0347751 25.359 209 134 6 79 271 173 375 7.92e-16 76.6
Msa0815930 MtrunA17_Chr0c01g0489581 25.510 294 182 11 2 275 78 354 8.86e-15 73.6
Msa0815930 MtrunA17_Chr3g0104831 23.711 291 174 11 20 275 25 302 9.03e-15 73.2
Msa0815930 MtrunA17_Chr2g0317271 25.170 294 183 11 2 275 78 354 1.06e-14 73.2
Msa0815930 MtrunA17_Chr0c01g0489571 25.510 294 182 11 2 275 78 354 1.81e-14 72.8
Msa0815930 MtrunA17_Chr2g0308211 32.824 131 83 3 2 129 19 147 6.19e-14 67.8
Msa0815930 MtrunA17_Chr1g0178931 24.254 268 180 9 2 260 84 337 1.60e-13 69.7
Msa0815930 MtrunA17_Chr4g0018571 33.108 148 95 3 125 268 28 175 1.65e-13 67.4
Msa0815930 MtrunA17_Chr1g0198351 25.191 262 167 7 2 251 88 332 1.76e-13 69.7
Msa0815930 MtrunA17_Chr3g0112691 24.917 301 190 11 2 277 76 365 2.01e-13 69.7
Msa0815930 MtrunA17_Chr7g0266061 24.060 266 171 9 2 254 89 336 5.44e-13 68.2
Msa0815930 MtrunA17_Chr1g0178941 24.460 278 175 10 2 260 87 348 3.17e-12 65.9
Msa0815930 MtrunA17_Chr8g0339251 27.778 162 105 3 67 219 132 290 3.64e-12 65.9
Msa0815930 MtrunA17_Chr6g0469521 31.298 131 86 3 118 244 22 152 4.82e-12 62.8
Msa0815930 MtrunA17_Chr2g0285041 33.607 122 77 4 13 131 9 129 2.47e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815930 AT5G37690.2 73.077 260 70 0 4 263 72 331 1.33e-147 417
Msa0815930 AT5G37690.1 72.692 260 71 0 4 263 80 339 4.46e-147 416
Msa0815930 AT1G74460.1 42.657 286 154 3 4 279 76 361 1.20e-79 245
Msa0815930 AT1G71691.1 41.154 260 149 3 7 264 8 265 3.80e-67 211
Msa0815930 AT1G71691.2 40.909 264 152 3 4 265 106 367 3.56e-66 211
Msa0815930 AT5G15720.3 42.279 272 144 6 3 264 48 316 7.51e-65 206
Msa0815930 AT5G15720.1 41.852 270 150 4 2 264 78 347 8.60e-65 207
Msa0815930 AT2G23540.1 41.700 247 137 4 24 263 123 369 6.33e-63 203
Msa0815930 AT1G29670.1 37.828 267 158 6 13 275 92 354 1.98e-62 201
Msa0815930 AT5G33370.1 36.742 264 164 3 4 264 82 345 5.71e-62 200
Msa0815930 AT3G50400.1 39.259 270 155 6 3 263 87 356 1.87e-61 199
Msa0815930 AT1G29670.2 37.828 267 158 6 13 275 160 422 2.33e-61 200
Msa0815930 AT1G71250.1 37.121 264 162 3 4 263 92 355 2.00e-58 191
Msa0815930 AT1G29660.1 38.168 262 155 5 13 269 92 351 1.73e-57 188
Msa0815930 AT4G18970.1 37.891 256 152 5 25 275 99 352 2.23e-57 188
Msa0815930 AT4G18970.2 37.891 256 152 5 25 275 99 352 1.77e-56 187
Msa0815930 AT5G45670.1 36.885 244 149 4 25 263 100 343 3.02e-56 185
Msa0815930 AT3G04290.1 35.227 264 168 3 4 264 81 344 1.58e-54 181
Msa0815930 AT5G08460.1 34.815 270 169 4 2 264 99 368 7.76e-54 179
Msa0815930 AT1G33811.1 36.923 260 150 6 24 271 104 361 7.00e-53 176
Msa0815930 AT4G10950.2 32.707 266 176 2 2 264 121 386 1.20e-51 174
Msa0815930 AT5G18430.1 34.586 266 169 4 4 264 80 345 8.69e-51 171
Msa0815930 AT4G10950.1 32.950 261 172 2 7 264 122 382 1.99e-50 171
Msa0815930 AT4G28780.1 32.955 264 174 2 4 264 83 346 2.44e-49 167
Msa0815930 AT5G41890.1 36.727 275 145 8 7 260 88 354 3.07e-49 167
Msa0815930 AT2G42990.1 32.103 271 175 7 2 266 78 345 1.04e-47 162
Msa0815930 AT1G71691.3 40.865 208 120 2 4 210 106 311 5.23e-47 159
Msa0815930 AT2G04570.1 32.103 271 177 6 2 267 78 346 1.15e-43 152
Msa0815930 AT5G15720.2 39.535 215 124 3 2 210 78 292 2.10e-43 150
Msa0815930 AT5G03810.1 33.457 269 169 7 2 263 80 345 2.87e-43 151
Msa0815930 AT5G33370.2 34.928 209 134 2 4 210 82 290 5.75e-43 149
Msa0815930 AT5G42170.1 31.868 273 174 7 2 268 100 366 1.17e-41 147
Msa0815930 AT5G03820.1 33.456 272 166 8 2 263 83 349 1.21e-41 147
Msa0815930 AT2G19060.1 33.333 249 147 7 28 269 104 340 1.75e-41 146
Msa0815930 AT4G26790.1 32.197 264 170 7 2 259 79 339 2.28e-41 146
Msa0815930 AT4G26790.2 32.197 264 170 7 2 259 79 339 2.28e-41 146
Msa0815930 AT5G03820.2 33.456 272 166 8 2 263 111 377 3.62e-41 146
Msa0815930 AT2G19050.1 32.530 249 147 8 28 269 105 339 5.62e-40 142
Msa0815930 AT2G19010.1 31.599 269 162 8 12 274 91 343 1.93e-39 140
Msa0815930 AT2G19010.2 31.599 269 162 8 12 274 121 373 5.85e-39 140
Msa0815930 AT1G75890.2 31.461 267 176 5 2 263 98 362 1.93e-37 136
Msa0815930 AT3G16370.1 33.333 273 170 8 4 268 82 350 2.77e-37 135
Msa0815930 AT1G75890.3 31.461 267 176 5 2 263 127 391 3.09e-37 136
Msa0815930 AT1G75880.1 32.090 268 172 6 3 263 103 367 3.94e-37 135
Msa0815930 AT1G75890.1 30.466 279 176 5 2 263 98 375 5.74e-37 135
Msa0815930 AT5G55050.1 32.787 244 151 7 24 260 118 355 6.02e-37 135
Msa0815930 AT1G20120.1 32.353 272 165 8 2 262 128 391 3.09e-36 133
Msa0815930 AT5G22810.1 33.696 276 165 10 2 265 84 353 3.21e-36 132
Msa0815930 AT2G30220.1 31.783 258 166 5 4 254 86 340 6.09e-36 132
Msa0815930 AT5G45950.1 29.588 267 181 5 2 266 90 351 1.11e-35 131
Msa0815930 AT1G58430.1 30.620 258 169 5 4 254 88 342 1.23e-35 131
Msa0815930 AT2G30310.1 31.395 258 167 5 4 254 87 341 1.40e-35 131
Msa0815930 AT1G75880.2 32.090 268 171 7 3 263 103 366 2.23e-35 130
Msa0815930 AT2G40250.1 28.881 277 182 6 2 267 86 358 2.61e-35 130
Msa0815930 AT1G75900.1 29.885 261 175 6 4 259 95 352 4.45e-35 129
Msa0815930 AT4G16230.1 40.625 160 91 2 10 165 87 246 2.90e-34 125
Msa0815930 AT2G31540.1 29.889 271 164 7 4 259 88 347 5.03e-34 127
Msa0815930 AT3G14225.1 32.283 254 154 6 25 264 111 360 5.13e-34 127
Msa0815930 AT1G20135.1 33.077 260 151 7 2 254 79 322 1.04e-33 125
Msa0815930 AT3G14225.2 32.143 252 153 6 25 264 111 356 1.06e-33 126
Msa0815930 AT5G40990.1 30.916 262 158 7 28 277 114 364 1.07e-33 126
Msa0815930 AT3G53100.1 30.597 268 169 9 2 259 79 339 1.27e-33 125
Msa0815930 AT5G45960.1 30.142 282 168 10 2 269 97 363 1.77e-33 125
Msa0815930 AT2G24560.1 30.116 259 169 7 4 254 87 341 1.03e-32 123
Msa0815930 AT3G14820.1 30.855 269 169 11 4 264 84 343 2.65e-32 122
Msa0815930 AT1G20130.2 29.577 284 176 9 2 266 234 512 6.75e-32 123
Msa0815930 AT1G20130.1 29.577 284 176 9 2 266 254 532 8.40e-32 123
Msa0815930 AT1G06990.1 26.740 273 190 6 2 267 87 356 9.47e-32 120
Msa0815930 AT1G23500.1 32.061 262 152 8 13 266 97 340 1.52e-31 120
Msa0815930 AT1G59406.1 28.676 272 180 9 4 268 82 346 8.12e-31 118
Msa0815930 AT1G59030.1 28.676 272 180 9 4 268 82 346 8.12e-31 118
Msa0815930 AT1G58725.1 28.676 272 180 9 4 268 82 346 8.12e-31 118
Msa0815930 AT1G53990.1 27.698 278 176 8 2 260 72 343 1.77e-30 117
Msa0815930 AT4G30140.1 30.081 246 155 7 28 269 107 339 1.82e-30 117
Msa0815930 AT2G31550.1 29.032 217 130 5 59 261 2 208 1.02e-29 112
Msa0815930 AT5G63170.1 31.250 256 157 9 4 254 80 321 4.32e-29 113
Msa0815930 AT1G53940.2 28.159 277 176 7 13 277 101 366 6.37e-29 113
Msa0815930 AT2G03980.2 30.996 271 170 9 2 263 93 355 5.51e-28 110
Msa0815930 AT2G03980.3 30.996 271 170 9 2 263 93 355 5.51e-28 110
Msa0815930 AT2G03980.1 30.996 271 170 9 2 263 93 355 5.51e-28 110
Msa0815930 AT2G03980.4 30.996 271 170 9 2 263 93 355 5.51e-28 110
Msa0815930 AT1G73610.1 30.075 266 170 7 4 266 87 339 4.27e-27 108
Msa0815930 AT1G75930.1 29.804 255 159 9 13 260 91 332 1.51e-26 106
Msa0815930 AT1G20132.1 27.413 259 174 7 13 263 123 375 3.13e-26 106
Msa0815930 AT1G71120.1 25.207 242 165 7 28 264 111 341 3.65e-26 105
Msa0815930 AT2G19050.2 34.302 172 103 5 28 196 105 269 7.55e-26 103
Msa0815930 AT1G58520.3 27.574 272 176 10 4 268 82 339 1.11e-25 104
Msa0815930 AT1G58525.1 27.574 272 176 10 4 268 82 339 1.11e-25 104
Msa0815930 AT1G56670.1 31.336 217 126 6 71 272 157 365 1.48e-25 104
Msa0815930 AT4G16233.1 39.450 109 64 1 158 264 5 113 1.52e-25 98.6
Msa0815930 AT3G43570.1 26.866 268 161 8 4 268 82 317 3.41e-25 102
Msa0815930 AT1G75910.1 29.167 264 173 6 3 261 79 333 5.38e-25 102
Msa0815930 AT1G53920.1 26.953 256 173 6 2 249 99 348 1.12e-24 102
Msa0815930 AT1G09390.1 31.556 225 124 7 63 272 153 362 1.05e-23 99.4
Msa0815930 AT1G75920.4 28.625 269 177 7 3 266 52 310 2.43e-23 97.4
Msa0815930 AT1G54020.1 26.749 243 160 6 27 265 19 247 4.37e-23 96.3
Msa0815930 AT1G54020.5 26.749 243 160 6 27 265 19 247 4.37e-23 96.3
Msa0815930 AT1G54020.3 26.749 243 160 6 27 265 19 247 4.37e-23 96.3
Msa0815930 AT1G54030.1 29.130 230 145 6 28 255 124 337 6.43e-23 97.8
Msa0815930 AT1G75920.2 28.625 269 177 7 3 266 80 338 6.48e-23 96.7
Msa0815930 AT1G75920.1 28.625 269 177 7 3 266 90 348 7.04e-23 96.7
Msa0815930 AT1G54020.2 25.954 262 169 7 15 265 86 333 9.94e-23 96.7
Msa0815930 AT1G54000.1 28.629 248 154 8 27 265 108 341 2.52e-22 95.9
Msa0815930 AT1G54010.1 28.458 253 160 8 24 265 99 341 6.36e-22 94.4
Msa0815930 AT1G54020.4 28.646 192 131 4 78 265 9 198 1.54e-21 90.9
Msa0815930 AT2G24560.2 28.774 212 144 5 4 210 87 296 8.94e-21 90.5
Msa0815930 AT1G54790.1 25.175 286 167 9 27 277 102 375 1.86e-20 90.5
Msa0815930 AT1G54790.3 25.175 286 167 9 27 277 103 376 1.87e-20 90.5
Msa0815930 AT3G14210.1 28.629 248 154 7 27 265 110 343 2.97e-20 89.7
Msa0815930 AT1G28580.2 26.621 293 183 13 2 271 8 291 8.18e-20 87.8
Msa0815930 AT1G53940.1 28.169 213 138 5 13 220 101 303 1.15e-19 87.0
Msa0815930 AT2G27360.1 26.370 292 186 10 2 271 85 369 2.25e-19 87.4
Msa0815930 AT1G28580.1 26.621 293 183 13 2 271 89 372 2.82e-19 87.0
Msa0815930 AT5G14450.1 25.914 301 184 10 2 271 87 379 2.94e-19 87.0
Msa0815930 AT1G75920.3 27.426 237 158 6 34 266 81 307 1.08e-18 84.7
Msa0815930 AT3G14210.2 28.889 225 141 6 50 265 1 215 1.38e-18 83.6
Msa0815930 AT3G05180.1 30.000 220 120 7 79 273 166 376 1.65e-18 84.7
Msa0815930 AT3G14220.1 25.806 248 163 8 25 264 102 336 3.92e-18 83.6
Msa0815930 AT3G43550.1 27.830 212 141 7 4 210 82 286 8.63e-18 81.6
Msa0815930 AT3G27950.1 25.735 272 164 7 28 271 102 363 1.21e-17 82.4
Msa0815930 AT3G48460.1 25.524 286 185 11 2 268 90 366 4.11e-17 80.9
Msa0815930 AT1G31550.2 25.763 295 182 9 2 271 88 370 5.10e-17 80.5
Msa0815930 AT4G01130.3 23.832 214 137 3 79 271 79 287 5.78e-17 79.3
Msa0815930 AT1G67830.1 26.102 295 173 10 2 261 76 360 6.12e-17 80.1
Msa0815930 AT4G01130.1 23.832 214 137 3 79 271 165 373 1.13e-16 79.7
Msa0815930 AT1G28600.1 25.085 295 184 11 2 271 83 365 1.70e-16 79.0
Msa0815930 AT5G45910.1 26.102 295 182 12 2 268 81 367 2.10e-16 78.6
Msa0815930 AT3G62280.1 25.287 261 165 7 27 268 106 355 2.58e-16 78.6
Msa0815930 AT1G28640.1 24.483 290 189 11 2 269 87 368 2.39e-15 75.9
Msa0815930 AT1G28610.2 24.823 282 179 11 2 260 83 354 6.56e-15 74.3
Msa0815930 AT5G03610.1 23.239 284 188 9 2 269 90 359 9.19e-15 73.9
Msa0815930 AT1G56670.2 32.192 146 88 4 71 210 157 297 1.52e-14 72.8
Msa0815930 AT3G26430.1 22.951 305 190 10 2 271 77 371 2.41e-14 72.8
Msa0815930 AT1G54030.2 28.261 184 115 5 28 209 124 292 3.90e-14 71.6
Msa0815930 AT1G31550.1 24.830 294 183 10 2 271 88 367 6.28e-14 71.6
Msa0815930 AT3G09930.2 25.926 270 161 9 2 252 86 335 2.03e-13 70.1
Msa0815930 AT3G09930.1 25.926 270 161 9 2 252 86 335 2.03e-13 70.1
Msa0815930 AT1G28660.2 24.080 299 187 14 2 276 87 369 2.20e-13 70.1
Msa0815930 AT1G28590.1 24.068 295 188 12 2 271 88 371 2.27e-13 70.1
Msa0815930 AT2G04020.2 26.482 253 125 10 13 255 104 305 6.17e-12 65.5

Find 47 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGGAATGAATATGTATTT+TGG 0.087334 5_3:-49681914 Msa0815930:CDS
TAATTTCTTGCAGCCGTTTA+TGG 0.179040 5_3:-49682525 Msa0815930:CDS
AGAAGCAATCACAGGAAAAT+TGG 0.218279 5_3:-49682739 Msa0815930:CDS
TACCTTAAGTTGTTGATCTA+AGG 0.241725 5_3:+49682451 None:intergenic
CTTTAAACATTGGCCTCGTT+TGG 0.307988 5_3:+49682261 None:intergenic
CCCAAAATACATATTCATTC+CGG 0.339117 5_3:+49681913 None:intergenic
AATGAAGCCACATACTTCAT+TGG 0.342866 5_3:-49682690 Msa0815930:CDS
AACCTTAGATCAACAACTTA+AGG 0.379257 5_3:-49682453 Msa0815930:intron
GTTTAAAGCAAGTTAATGAA+TGG 0.410689 5_3:-49682246 Msa0815930:CDS
ATGTCGATGCCCTTCTCAAA+GGG 0.417332 5_3:-49682955 Msa0815930:CDS
GAAGCAATCACAGGAAAATT+GGG 0.432117 5_3:-49682738 Msa0815930:CDS
ATGAAGCCACATACTTCATT+GGG 0.432552 5_3:-49682689 Msa0815930:CDS
ACTCATCATGAGTATATTGT+TGG 0.446312 5_3:+49682495 None:intergenic
ATCGATAATCCATCTACATA+TGG 0.448631 5_3:-49682115 Msa0815930:intron
AAAGGGGTAAATTATGCATC+TGG 0.463353 5_3:-49682938 Msa0815930:CDS
CATTAACTTGCTTTAAACAT+TGG 0.463554 5_3:+49682251 None:intergenic
TGTTGGCCATCTGCCATAAA+CGG 0.464753 5_3:+49682512 None:intergenic
TTGCAGCCGTTTATGGCAGA+TGG 0.485530 5_3:-49682518 Msa0815930:CDS
AGAAATTAAGGGGAAGGGCT+AGG 0.486488 5_3:+49681804 None:intergenic
TCGATTAAGTCAAGAACTAA+AGG 0.488857 5_3:+49682133 None:intergenic
TTGGATTTAACTCTTTGTGA+TGG 0.494538 5_3:+49682280 None:intergenic
CATAATTTACCCCTTTGAGA+AGG 0.498835 5_3:+49682945 None:intergenic
TACCAGAGACTGTATCAGTT+AGG 0.512597 5_3:-49682349 Msa0815930:intron
AATTATGCATCTGGTGGAGC+GGG 0.521880 5_3:-49682929 Msa0815930:CDS
AATGTAGACACAAGCATTGG+AGG 0.524774 5_3:-49681969 Msa0815930:CDS
GAAGGGCTAGGTGCTGCAGA+TGG 0.535879 5_3:+49681816 None:intergenic
ATAGCATTTGCTGCATCTGA+TGG 0.538022 5_3:+49681879 None:intergenic
TGAGGCACTGACAAATAAGC+TGG 0.538105 5_3:+49682980 None:intergenic
TTTCACGGACTTGGTCCACT+CGG 0.540757 5_3:-49682310 Msa0815930:CDS
TGCAATGTAGACACAAGCAT+TGG 0.545648 5_3:-49681972 Msa0815930:CDS
AATGTCGATGCCCTTCTCAA+AGG 0.551571 5_3:-49682956 Msa0815930:CDS
ATAATTTACCCCTTTGAGAA+GGG 0.552596 5_3:+49682946 None:intergenic
ACCTATCCCAATGAAGTATG+TGG 0.560796 5_3:+49682683 None:intergenic
TGTATGAGAAATTAAGGGGA+AGG 0.565693 5_3:+49681798 None:intergenic
TAAGTCAAGAACTAAAGGAT+AGG 0.566656 5_3:+49682138 None:intergenic
GTATGAGAAATTAAGGGGAA+GGG 0.581762 5_3:+49681799 None:intergenic
AAAACTAAAGAAGCAATCAC+AGG 0.588868 5_3:-49682747 Msa0815930:CDS
TTGATGTATGAGAAATTAAG+GGG 0.591200 5_3:+49681794 None:intergenic
GGGGTAAATTATGCATCTGG+TGG 0.613940 5_3:-49682935 Msa0815930:CDS
AAATTATGCATCTGGTGGAG+CGG 0.615664 5_3:-49682930 Msa0815930:CDS
CTAATCATCAAACTAAACCA+TGG 0.634969 5_3:-49682193 Msa0815930:CDS
GCCACATACTTCATTGGGAT+AGG 0.636934 5_3:-49682684 Msa0815930:intron
TGTCGATGCCCTTCTCAAAG+GGG 0.661110 5_3:-49682954 Msa0815930:CDS
GCGGGAATTCTCAATGACAC+AGG 0.663648 5_3:-49682911 Msa0815930:CDS
CAAAGAGTTAAATCCAAACG+AGG 0.705796 5_3:-49682274 Msa0815930:CDS
TGTGATGGAATACAACCGAG+TGG 0.734121 5_3:+49682295 None:intergenic
GGCACTGACAAATAAGCTGG+TGG 0.736961 5_3:+49682983 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATCTTAAGCATAATGTA+AGG + chr5_3:49682754-49682773 None:intergenic 20.0%
!! ATAATCTTAAGCATAATGTA+AGG + chr5_3:49682754-49682773 None:intergenic 20.0%
!!! CATTAACTTGCTTTAAACAT+TGG + chr5_3:49682577-49682596 None:intergenic 25.0%
!! GTTTAAAGCAAGTTAATGAA+TGG - chr5_3:49682579-49682598 Msa0815930:intron 25.0%
!! GAAATTTTACCATATGTAGA+TGG + chr5_3:49682722-49682741 None:intergenic 25.0%
!!! TTTTTGCATAACTTTGAGTT+TGG + chr5_3:49682892-49682911 None:intergenic 25.0%
!!! CATTAACTTGCTTTAAACAT+TGG + chr5_3:49682577-49682596 None:intergenic 25.0%
!! GTTTAAAGCAAGTTAATGAA+TGG - chr5_3:49682579-49682598 Msa0815930:intron 25.0%
!! GAAATTTTACCATATGTAGA+TGG + chr5_3:49682722-49682741 None:intergenic 25.0%
!!! TTTTTGCATAACTTTGAGTT+TGG + chr5_3:49682892-49682911 None:intergenic 25.0%
! ATAATTTACCCCTTTGAGAA+GGG + chr5_3:49681882-49681901 None:intergenic 30.0%
AAAACTAAAGAAGCAATCAC+AGG - chr5_3:49682078-49682097 Msa0815930:intron 30.0%
CTAGTAAACTACATTTATGC+AGG - chr5_3:49682259-49682278 Msa0815930:CDS 30.0%
ACTCATCATGAGTATATTGT+TGG + chr5_3:49682333-49682352 None:intergenic 30.0%
AACCTTAGATCAACAACTTA+AGG - chr5_3:49682372-49682391 Msa0815930:intron 30.0%
! TACCTTAAGTTGTTGATCTA+AGG + chr5_3:49682377-49682396 None:intergenic 30.0%
! GCACAAAAAATGGTTTTTCA+CGG - chr5_3:49682500-49682519 Msa0815930:CDS 30.0%
TTGGATTTAACTCTTTGTGA+TGG + chr5_3:49682548-49682567 None:intergenic 30.0%
CTAATCATCAAACTAAACCA+TGG - chr5_3:49682632-49682651 Msa0815930:intron 30.0%
TAAGTCAAGAACTAAAGGAT+AGG + chr5_3:49682690-49682709 None:intergenic 30.0%
TCGATTAAGTCAAGAACTAA+AGG + chr5_3:49682695-49682714 None:intergenic 30.0%
ATCGATAATCCATCTACATA+TGG - chr5_3:49682710-49682729 Msa0815930:CDS 30.0%
! TTTTGTTGCTGTATTTCAAC+AGG - chr5_3:49682805-49682824 Msa0815930:intron 30.0%
ACTCAAAGTTATGCAAAAAC+CGG - chr5_3:49682893-49682912 Msa0815930:intron 30.0%
! ACCGGAATGAATATGTATTT+TGG - chr5_3:49682911-49682930 Msa0815930:CDS 30.0%
CCCAAAATACATATTCATTC+CGG + chr5_3:49682915-49682934 None:intergenic 30.0%
! CCGGAATGAATATGTATTTT+GGG - chr5_3:49682912-49682931 Msa0815930:CDS 30.0%
! ATAATTTACCCCTTTGAGAA+GGG + chr5_3:49681882-49681901 None:intergenic 30.0%
AAAACTAAAGAAGCAATCAC+AGG - chr5_3:49682078-49682097 Msa0815930:intron 30.0%
CTAGTAAACTACATTTATGC+AGG - chr5_3:49682259-49682278 Msa0815930:CDS 30.0%
ACTCATCATGAGTATATTGT+TGG + chr5_3:49682333-49682352 None:intergenic 30.0%
AACCTTAGATCAACAACTTA+AGG - chr5_3:49682372-49682391 Msa0815930:intron 30.0%
! TACCTTAAGTTGTTGATCTA+AGG + chr5_3:49682377-49682396 None:intergenic 30.0%
! GCACAAAAAATGGTTTTTCA+CGG - chr5_3:49682500-49682519 Msa0815930:CDS 30.0%
TTGGATTTAACTCTTTGTGA+TGG + chr5_3:49682548-49682567 None:intergenic 30.0%
CTAATCATCAAACTAAACCA+TGG - chr5_3:49682632-49682651 Msa0815930:intron 30.0%
TAAGTCAAGAACTAAAGGAT+AGG + chr5_3:49682690-49682709 None:intergenic 30.0%
TCGATTAAGTCAAGAACTAA+AGG + chr5_3:49682695-49682714 None:intergenic 30.0%
ATCGATAATCCATCTACATA+TGG - chr5_3:49682710-49682729 Msa0815930:CDS 30.0%
! TTTTGTTGCTGTATTTCAAC+AGG - chr5_3:49682805-49682824 Msa0815930:intron 30.0%
ACTCAAAGTTATGCAAAAAC+CGG - chr5_3:49682893-49682912 Msa0815930:intron 30.0%
! ACCGGAATGAATATGTATTT+TGG - chr5_3:49682911-49682930 Msa0815930:CDS 30.0%
CCCAAAATACATATTCATTC+CGG + chr5_3:49682915-49682934 None:intergenic 30.0%
! CCGGAATGAATATGTATTTT+GGG - chr5_3:49682912-49682931 Msa0815930:CDS 30.0%
! CATAATTTACCCCTTTGAGA+AGG + chr5_3:49681883-49681902 None:intergenic 35.0%
AAAGGGGTAAATTATGCATC+TGG - chr5_3:49681887-49681906 Msa0815930:CDS 35.0%
AGAAGCAATCACAGGAAAAT+TGG - chr5_3:49682086-49682105 Msa0815930:intron 35.0%
GAAGCAATCACAGGAAAATT+GGG - chr5_3:49682087-49682106 Msa0815930:intron 35.0%
AATGAAGCCACATACTTCAT+TGG - chr5_3:49682135-49682154 Msa0815930:CDS 35.0%
ATGAAGCCACATACTTCATT+GGG - chr5_3:49682136-49682155 Msa0815930:CDS 35.0%
TAATTTCTTGCAGCCGTTTA+TGG - chr5_3:49682300-49682319 Msa0815930:CDS 35.0%
ATCATGAGTAGTTCAGTTCT+TGG + chr5_3:49682417-49682436 None:intergenic 35.0%
! TCAGTTAGGAGCACAAAAAA+TGG - chr5_3:49682490-49682509 Msa0815930:CDS 35.0%
! AAAATGGTTTTTCACGGACT+TGG - chr5_3:49682506-49682525 Msa0815930:CDS 35.0%
CAAAGAGTTAAATCCAAACG+AGG - chr5_3:49682551-49682570 Msa0815930:intron 35.0%
! GCAAAGACAAGTTTTGCATT+TGG + chr5_3:49682662-49682681 None:intergenic 35.0%
GCATAATGTAAGGCTTAATG+TGG + chr5_3:49682744-49682763 None:intergenic 35.0%
! CATAATTTACCCCTTTGAGA+AGG + chr5_3:49681883-49681902 None:intergenic 35.0%
AAAGGGGTAAATTATGCATC+TGG - chr5_3:49681887-49681906 Msa0815930:CDS 35.0%
AGAAGCAATCACAGGAAAAT+TGG - chr5_3:49682086-49682105 Msa0815930:intron 35.0%
GAAGCAATCACAGGAAAATT+GGG - chr5_3:49682087-49682106 Msa0815930:intron 35.0%
AATGAAGCCACATACTTCAT+TGG - chr5_3:49682135-49682154 Msa0815930:CDS 35.0%
ATGAAGCCACATACTTCATT+GGG - chr5_3:49682136-49682155 Msa0815930:CDS 35.0%
TAATTTCTTGCAGCCGTTTA+TGG - chr5_3:49682300-49682319 Msa0815930:CDS 35.0%
ATCATGAGTAGTTCAGTTCT+TGG + chr5_3:49682417-49682436 None:intergenic 35.0%
! TCAGTTAGGAGCACAAAAAA+TGG - chr5_3:49682490-49682509 Msa0815930:CDS 35.0%
! AAAATGGTTTTTCACGGACT+TGG - chr5_3:49682506-49682525 Msa0815930:CDS 35.0%
CAAAGAGTTAAATCCAAACG+AGG - chr5_3:49682551-49682570 Msa0815930:intron 35.0%
! GCAAAGACAAGTTTTGCATT+TGG + chr5_3:49682662-49682681 None:intergenic 35.0%
GCATAATGTAAGGCTTAATG+TGG + chr5_3:49682744-49682763 None:intergenic 35.0%
! CATTTTGCAGCATCAAAGCT+AGG - chr5_3:49681809-49681828 Msa0815930:CDS 40.0%
AAATTATGCATCTGGTGGAG+CGG - chr5_3:49681895-49681914 Msa0815930:CDS 40.0%
ACCTATCCCAATGAAGTATG+TGG + chr5_3:49682145-49682164 None:intergenic 40.0%
TACCAGAGACTGTATCAGTT+AGG - chr5_3:49682476-49682495 Msa0815930:CDS 40.0%
! CTTTAAACATTGGCCTCGTT+TGG + chr5_3:49682567-49682586 None:intergenic 40.0%
! GTTTTGCATTTGGAAGACCA+TGG + chr5_3:49682652-49682671 None:intergenic 40.0%
TGCAATGTAGACACAAGCAT+TGG - chr5_3:49682853-49682872 Msa0815930:intron 40.0%
!! AATGTAGACACAAGCATTGG+AGG - chr5_3:49682856-49682875 Msa0815930:intron 40.0%
! ATAGCATTTGCTGCATCTGA+TGG + chr5_3:49682949-49682968 None:intergenic 40.0%
! CATTTTGCAGCATCAAAGCT+AGG - chr5_3:49681809-49681828 Msa0815930:CDS 40.0%
AAATTATGCATCTGGTGGAG+CGG - chr5_3:49681895-49681914 Msa0815930:CDS 40.0%
ACCTATCCCAATGAAGTATG+TGG + chr5_3:49682145-49682164 None:intergenic 40.0%
TACCAGAGACTGTATCAGTT+AGG - chr5_3:49682476-49682495 Msa0815930:CDS 40.0%
! CTTTAAACATTGGCCTCGTT+TGG + chr5_3:49682567-49682586 None:intergenic 40.0%
! GTTTTGCATTTGGAAGACCA+TGG + chr5_3:49682652-49682671 None:intergenic 40.0%
TGCAATGTAGACACAAGCAT+TGG - chr5_3:49682853-49682872 Msa0815930:intron 40.0%
!! AATGTAGACACAAGCATTGG+AGG - chr5_3:49682856-49682875 Msa0815930:intron 40.0%
! ATAGCATTTGCTGCATCTGA+TGG + chr5_3:49682949-49682968 None:intergenic 40.0%
!! TGAGGCACTGACAAATAAGC+TGG + chr5_3:49681848-49681867 None:intergenic 45.0%
!!! AGAAGGGCATCGACATTTTG+AGG + chr5_3:49681866-49681885 None:intergenic 45.0%
AATGTCGATGCCCTTCTCAA+AGG - chr5_3:49681869-49681888 Msa0815930:CDS 45.0%
ATGTCGATGCCCTTCTCAAA+GGG - chr5_3:49681870-49681889 Msa0815930:CDS 45.0%
GGGGTAAATTATGCATCTGG+TGG - chr5_3:49681890-49681909 Msa0815930:CDS 45.0%
AATTATGCATCTGGTGGAGC+GGG - chr5_3:49681896-49681915 Msa0815930:CDS 45.0%
GCCACATACTTCATTGGGAT+AGG - chr5_3:49682141-49682160 Msa0815930:CDS 45.0%
TGTTGGCCATCTGCCATAAA+CGG + chr5_3:49682316-49682335 None:intergenic 45.0%
CTCCTAACTGATACAGTCTC+TGG + chr5_3:49682481-49682500 None:intergenic 45.0%
! TGTGATGGAATACAACCGAG+TGG + chr5_3:49682533-49682552 None:intergenic 45.0%
!! TGAGGCACTGACAAATAAGC+TGG + chr5_3:49681848-49681867 None:intergenic 45.0%
!!! AGAAGGGCATCGACATTTTG+AGG + chr5_3:49681866-49681885 None:intergenic 45.0%
AATGTCGATGCCCTTCTCAA+AGG - chr5_3:49681869-49681888 Msa0815930:CDS 45.0%
ATGTCGATGCCCTTCTCAAA+GGG - chr5_3:49681870-49681889 Msa0815930:CDS 45.0%
GGGGTAAATTATGCATCTGG+TGG - chr5_3:49681890-49681909 Msa0815930:CDS 45.0%
AATTATGCATCTGGTGGAGC+GGG - chr5_3:49681896-49681915 Msa0815930:CDS 45.0%
GCCACATACTTCATTGGGAT+AGG - chr5_3:49682141-49682160 Msa0815930:CDS 45.0%
TGTTGGCCATCTGCCATAAA+CGG + chr5_3:49682316-49682335 None:intergenic 45.0%
CTCCTAACTGATACAGTCTC+TGG + chr5_3:49682481-49682500 None:intergenic 45.0%
! TGTGATGGAATACAACCGAG+TGG + chr5_3:49682533-49682552 None:intergenic 45.0%
!! GGCACTGACAAATAAGCTGG+TGG + chr5_3:49681845-49681864 None:intergenic 50.0%
TGTCGATGCCCTTCTCAAAG+GGG - chr5_3:49681871-49681890 Msa0815930:CDS 50.0%
GCGGGAATTCTCAATGACAC+AGG - chr5_3:49681914-49681933 Msa0815930:CDS 50.0%
TTGCAGCCGTTTATGGCAGA+TGG - chr5_3:49682307-49682326 Msa0815930:CDS 50.0%
! TTTCACGGACTTGGTCCACT+CGG - chr5_3:49682515-49682534 Msa0815930:CDS 50.0%
!! GGCACTGACAAATAAGCTGG+TGG + chr5_3:49681845-49681864 None:intergenic 50.0%
TGTCGATGCCCTTCTCAAAG+GGG - chr5_3:49681871-49681890 Msa0815930:CDS 50.0%
GCGGGAATTCTCAATGACAC+AGG - chr5_3:49681914-49681933 Msa0815930:CDS 50.0%
TTGCAGCCGTTTATGGCAGA+TGG - chr5_3:49682307-49682326 Msa0815930:CDS 50.0%
! TTTCACGGACTTGGTCCACT+CGG - chr5_3:49682515-49682534 Msa0815930:CDS 50.0%
! GAAGGGCTAGGTGCTGCAGA+TGG + chr5_3:49683012-49683031 None:intergenic 60.0%
! GAAGGGCTAGGTGCTGCAGA+TGG + chr5_3:49683012-49683031 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 49681809 49683038 49681809 ID=Msa0815930;Name=Msa0815930
chr5_3 mRNA 49681809 49683038 49681809 ID=Msa0815930-mRNA-1;Parent=Msa0815930;Name=Msa0815930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|0.2|1|1|1|5|0|279
chr5_3 exon 49681809 49682020 49681809 ID=Msa0815930-mRNA-1:exon:14944;Parent=Msa0815930-mRNA-1
chr5_3 exon 49682116 49682365 49682116 ID=Msa0815930-mRNA-1:exon:14943;Parent=Msa0815930-mRNA-1
chr5_3 exon 49682454 49682566 49682454 ID=Msa0815930-mRNA-1:exon:14942;Parent=Msa0815930-mRNA-1
chr5_3 exon 49682685 49682811 49682685 ID=Msa0815930-mRNA-1:exon:14941;Parent=Msa0815930-mRNA-1
chr5_3 exon 49682901 49683038 49682901 ID=Msa0815930-mRNA-1:exon:14940;Parent=Msa0815930-mRNA-1
chr5_3 CDS 49682901 49683038 49682901 ID=Msa0815930-mRNA-1:cds;Parent=Msa0815930-mRNA-1
chr5_3 CDS 49682685 49682811 49682685 ID=Msa0815930-mRNA-1:cds;Parent=Msa0815930-mRNA-1
chr5_3 CDS 49682454 49682566 49682454 ID=Msa0815930-mRNA-1:cds;Parent=Msa0815930-mRNA-1
chr5_3 CDS 49682116 49682365 49682116 ID=Msa0815930-mRNA-1:cds;Parent=Msa0815930-mRNA-1
chr5_3 CDS 49681809 49682020 49681809 ID=Msa0815930-mRNA-1:cds;Parent=Msa0815930-mRNA-1
Gene Sequence

>Msa0815930

CATTTTGCAGCATCAAAGCTAGGTATCGAATCACCACCAGCTTATTTGTCAGTGCCTCAAAATGTCGATGCCCTTCTCAAAGGGGTAAATTATGCATCTGGTGGAGCGGGAATTCTCAATGACACAGGACTTTACTTTATTCAGAGACTGACTCTTGATGATCAAATAAAAAGTTTCAAGAAAACTAAAGAAGCAATCACAGGAAAATTGGGTGAAGCTGCTGCTAACAAGCATTTCAATGAAGCCACATACTTCATTGGGATAGGCAGCAATGATTATGTCAATAATTTCTTGCAGCCGTTTATGGCAGATGGCCAACAATATACTCATGATGAGTTCATAGAGCTCTTAATCTCAACCTTAGATCAACAACTTAAGAGACTGTATCAGTTAGGAGCACAAAAAATGGTTTTTCACGGACTTGGTCCACTCGGTTGTATTCCATCACAAAGAGTTAAATCCAAACGAGGCCAATGTTTAAAGCAAGTTAATGAATGGATTCAACAATTCAACTCTGAAGTACAGAAGCTAATCATCAAACTAAACCATGGTCTTCCAAATGCAAAACTTGTCTTTGCAGACACCTATCCTTTAGTTCTTGACTTAATCGATAATCCATCTACATATGGTTTTAAAGTTTCAAATACATCTTGTTGCAATGTAGACACAAGCATTGGAGGTTTATGCTTACCAAACTCAAAGTTATGCAAAAACCGGAATGAATATGTATTTTGGGATGCATTTCATCCATCAGATGCAGCAAATGCTATTCTAGCAGAGAAATTCTTCTCTAGTCTTTTCTCATCAGCTCCATCTGCAGCACCTAGCCCTTCCCCTTAA
Protein sequence

>Msa0815930

HFAASKLGIESPPAYLSVPQNVDALLKGVNYASGGAGILNDTGLYFIQRLTLDDQIKSFKKTKEAITGKLGEAAANKHFNEATYFIGIGSNDYVNNFLQPFMADGQQYTHDEFIELLISTLDQQLKRLYQLGAQKMVFHGLGPLGCIPSQRVKSKRGQCLKQVNEWIQQFNSEVQKLIIKLNHGLPNAKLVFADTYPLVLDLIDNPSTYGFKVSNTSCCNVDTSIGGLCLPNSKLCKNRNEYVFWDAFHPSDAANAILAEKFFSSLFSSAPSAAPSPSP*