Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780550 | sp|F4HY56|RLT1_ARATH | 55.357 | 56 | 25 | 0 | 20 | 75 | 41 | 96 | 1.68e-13 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780550 | G7K365 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1110 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0780550 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0780550 | Msa0821920 | 0.953610 | 1.875503e-111 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780550 | MtrunA17_Chr5g0441991 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1110 |
| Msa0780550 | MtrunA17_Chr3g0094681 | 56.261 | 551 | 188 | 8 | 1 | 543 | 1 | 506 | 0.0 | 549 |
| Msa0780550 | MtrunA17_Chr4g0046591 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 3.20e-13 | 72.8 |
| Msa0780550 | MtrunA17_Chr2g0282771 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 1.08e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780550 | AT4G03250.1 | 39.432 | 563 | 261 | 17 | 3 | 544 | 4 | 507 | 1.65e-84 | 271 |
| Msa0780550 | AT1G28420.1 | 55.357 | 56 | 25 | 0 | 20 | 75 | 41 | 96 | 1.71e-14 | 77.4 |
Find 144 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGATCCTGTTGTGAGATTT+TGG | 0.105213 | 5_2:+62308219 | None:intergenic |
| TTCAATTTGACCCTTGAAAT+TGG | 0.130736 | 5_2:+62308336 | None:intergenic |
| TTCCATTGTTGTGAAGAATT+TGG | 0.166089 | 5_2:+62308192 | None:intergenic |
| TGTACAGGATGAGTTGTTTA+AGG | 0.209194 | 5_2:-62303995 | Msa0780550:intron |
| CTTCCAAACATGGACTAAAT+TGG | 0.226621 | 5_2:+62302649 | None:intergenic |
| ACACTCCTTTGCACATTCTT+TGG | 0.238382 | 5_2:+62304260 | None:intergenic |
| TTGACAGAAAAGCAAGTTTC+TGG | 0.241531 | 5_2:-62307250 | Msa0780550:CDS |
| TCACTCCTTTGCGCTTTCTT+TGG | 0.251232 | 5_2:+62304197 | None:intergenic |
| GATTGCACCTTTCGGATTTA+AGG | 0.253961 | 5_2:+62306853 | None:intergenic |
| CCGTTGCTCTCAACCTCTTT+AGG | 0.296329 | 5_2:+62307064 | None:intergenic |
| AAACAAGGAGCTTGTGATTA+AGG | 0.299273 | 5_2:+62308374 | None:intergenic |
| AAGAAAGAGGGCTATCTTCT+AGG | 0.323284 | 5_2:-62304115 | Msa0780550:CDS |
| CAGGATCGTGGCAGTGGACT+TGG | 0.326571 | 5_2:-62307136 | Msa0780550:CDS |
| GTTGCATGATGTTCATGTTC+AGG | 0.329068 | 5_2:-62304558 | Msa0780550:CDS |
| CAAAACGCCTGCACAGCTTA+AGG | 0.344150 | 5_2:-62307425 | Msa0780550:CDS |
| ACTGCTGTTAAGAAGCAATT+AGG | 0.344355 | 5_2:-62306767 | Msa0780550:CDS |
| CACATGCAATTTACTAGTTA+AGG | 0.352181 | 5_2:-62302901 | Msa0780550:three_prime_UTR |
| CCCATGTTGATTGCACCTTT+CGG | 0.370330 | 5_2:+62306845 | None:intergenic |
| CTCCTTCCATATGAGTATCT+TGG | 0.372564 | 5_2:+62304594 | None:intergenic |
| GGAACCTGTTTCATATTGTA+TGG | 0.374331 | 5_2:+62303750 | None:intergenic |
| GATCCAATTTAGTCCATGTT+TGG | 0.379275 | 5_2:-62302652 | Msa0780550:three_prime_UTR |
| CCTTTGCACATTCTTTGGAT+TGG | 0.379454 | 5_2:+62304265 | None:intergenic |
| GCATGGTGATTATAAGTATC+TGG | 0.393909 | 5_2:-62307089 | Msa0780550:CDS |
| CATGAACTGCGTCTTCAGTT+TGG | 0.394238 | 5_2:+62306672 | None:intergenic |
| AATGTAACGTAAAAGAGAAA+AGG | 0.394526 | 5_2:+62308310 | None:intergenic |
| TTGACCCTTGAAATTGGGTT+AGG | 0.400566 | 5_2:+62308342 | None:intergenic |
| GCAATTAGGAAGGAATTATC+AGG | 0.404766 | 5_2:-62306753 | Msa0780550:CDS |
| CAATCAATCCAGTGAGGAAC+TGG | 0.405732 | 5_2:+62302966 | None:intergenic |
| TCCTTCCATATGAGTATCTT+GGG | 0.407012 | 5_2:+62304595 | None:intergenic |
| GCCTGCACAGCTTAAGGGCT+TGG | 0.407132 | 5_2:-62307419 | Msa0780550:CDS |
| TATCGTGATGCAGGTGGAGC+AGG | 0.408220 | 5_2:-62303949 | Msa0780550:CDS |
| CAAACTGAAGACGCAGTTCA+TGG | 0.411080 | 5_2:-62306671 | Msa0780550:intron |
| AGAGTCTTCATACAAATCTA+AGG | 0.411845 | 5_2:+62304448 | None:intergenic |
| AAAACGCCTGCACAGCTTAA+GGG | 0.413028 | 5_2:-62307424 | Msa0780550:CDS |
| GCTCACCTCTGAGCTTTCCT+TGG | 0.413393 | 5_2:+62303711 | None:intergenic |
| CTAGAAGGCTCCATCTCATA+TGG | 0.414116 | 5_2:+62306896 | None:intergenic |
| CTTGGTTCTATCTCAGCAAC+AGG | 0.414880 | 5_2:+62303729 | None:intergenic |
| ATTGCACCTTTCGGATTTAA+GGG | 0.420903 | 5_2:+62306854 | None:intergenic |
| AAAGAAGAAGCAAATGCTAA+TGG | 0.421245 | 5_2:-62307187 | Msa0780550:CDS |
| TCAATTTGACCCTTGAAATT+GGG | 0.421790 | 5_2:+62308337 | None:intergenic |
| TTGTTCCTAACCCAATTTCA+AGG | 0.421822 | 5_2:-62308347 | Msa0780550:five_prime_UTR |
| TGACCCCAAAATCTCACAAC+AGG | 0.425309 | 5_2:-62308224 | Msa0780550:five_prime_UTR |
| TCAACCATACAATATGAAAC+AGG | 0.427437 | 5_2:-62303754 | Msa0780550:CDS |
| CAAGTCCACTGCCACGATCC+TGG | 0.429748 | 5_2:+62307137 | None:intergenic |
| GATGCTTTCAAATGAGACTA+TGG | 0.432046 | 5_2:-62303926 | Msa0780550:intron |
| GAAGAGCAGGATCAGCAATA+TGG | 0.436376 | 5_2:+62305106 | None:intergenic |
| GTACAGGATGAGTTGTTTAA+GGG | 0.451788 | 5_2:-62303994 | Msa0780550:intron |
| CAGGAAGATGGTCCACTACT+TGG | 0.459717 | 5_2:-62306734 | Msa0780550:CDS |
| TTTGTCTATGTTTGTTACCA+TGG | 0.460773 | 5_2:+62304513 | None:intergenic |
| GCTCCATCTCATATGGATCT+TGG | 0.461565 | 5_2:+62306903 | None:intergenic |
| CATATGGAAGGAGTTGACTT+TGG | 0.462273 | 5_2:-62304584 | Msa0780550:CDS |
| TCAAATGCCCCTGGAGGAAG+TGG | 0.466413 | 5_2:+62306698 | None:intergenic |
| AGGAAGTCTGCATGTTTGAC+TGG | 0.467186 | 5_2:+62304308 | None:intergenic |
| TCCAAGCCCTTAAGCTGTGC+AGG | 0.467500 | 5_2:+62307418 | None:intergenic |
| GGATGCCAAGCGCGGTGTTG+AGG | 0.467670 | 5_2:-62304384 | Msa0780550:CDS |
| TTTCTTCATAGCGATCACTA+TGG | 0.468844 | 5_2:+62304336 | None:intergenic |
| AGAGCTTTACTATATCTAGA+AGG | 0.474291 | 5_2:+62306881 | None:intergenic |
| ATGTAACGTAAAAGAGAAAA+GGG | 0.479183 | 5_2:+62308311 | None:intergenic |
| AAGAAGAAGCAAATGCTAAT+GGG | 0.480312 | 5_2:-62307186 | Msa0780550:CDS |
| GCTAATTTCAATTCCTCTGT+CGG | 0.480787 | 5_2:+62307292 | None:intergenic |
| TGACAGAAAAGCAAGTTTCT+GGG | 0.481471 | 5_2:-62307249 | Msa0780550:CDS |
| TCTGGAGAATTCAGAAGAGC+AGG | 0.481510 | 5_2:+62305093 | None:intergenic |
| GTCATCCAGGATCGTGGCAG+TGG | 0.484263 | 5_2:-62307142 | Msa0780550:CDS |
| GATTTGTATGAAGACTCTAC+TGG | 0.484462 | 5_2:-62304443 | Msa0780550:CDS |
| GATGCCAAGCGCGGTGTTGA+GGG | 0.484892 | 5_2:-62304383 | Msa0780550:CDS |
| GAATTTGATCCACTTCCTCC+AGG | 0.485743 | 5_2:-62306707 | Msa0780550:CDS |
| GTTTGGCATTCAAATGCCCC+TGG | 0.490524 | 5_2:+62306689 | None:intergenic |
| TGCTGATACCAGTTCCTCAC+TGG | 0.497663 | 5_2:-62302974 | Msa0780550:CDS |
| TGGTTCCCAAGATACTCATA+TGG | 0.513127 | 5_2:-62304600 | Msa0780550:CDS |
| TTCCAAATTCTTCACAACAA+TGG | 0.516500 | 5_2:-62308194 | Msa0780550:exon |
| AACATGGGATATAAACCATC+GGG | 0.519479 | 5_2:-62306830 | Msa0780550:CDS |
| CATACCCTCAACACCGCGCT+TGG | 0.522849 | 5_2:+62304379 | None:intergenic |
| TCGTTCAAGTGGTGTCATCC+AGG | 0.523322 | 5_2:-62307155 | Msa0780550:CDS |
| TCTAAGGAAGAGTTCCTGCC+AGG | 0.525417 | 5_2:+62304464 | None:intergenic |
| TTCTGAAAATGTCAGTGGAA+TGG | 0.528577 | 5_2:-62306984 | Msa0780550:CDS |
| GAATTGTGGATTGAGTTTGA+AGG | 0.540955 | 5_2:+62304158 | None:intergenic |
| ATCGGGATATTTGAAAGTGA+AGG | 0.542663 | 5_2:-62306813 | Msa0780550:CDS |
| GCAGGATCAGCAATATGGTA+TGG | 0.543728 | 5_2:+62305111 | None:intergenic |
| CATCACTAAGAATCATAAGA+AGG | 0.545103 | 5_2:-62304405 | Msa0780550:CDS |
| GCTATCTTCTAGGATGACTA+AGG | 0.550617 | 5_2:-62304105 | Msa0780550:intron |
| AGGATCGTGGCAGTGGACTT+GGG | 0.551473 | 5_2:-62307135 | Msa0780550:CDS |
| TGTTCCTAACCCAATTTCAA+GGG | 0.554438 | 5_2:-62308346 | Msa0780550:five_prime_UTR |
| AAATTCTTCACAACAATGGA+AGG | 0.554885 | 5_2:-62308190 | Msa0780550:intron |
| TAAGTATCTGGATCCTAAAG+AGG | 0.555927 | 5_2:-62307077 | Msa0780550:CDS |
| GGAAGGAATTATCAGGAAGA+TGG | 0.556235 | 5_2:-62306746 | Msa0780550:CDS |
| CCACAGAACCTCGAGAATTG+TGG | 0.558056 | 5_2:+62304144 | None:intergenic |
| TCATATGGATCTTGGCCTTG+AGG | 0.561124 | 5_2:+62306911 | None:intergenic |
| CCACAATTCTCGAGGTTCTG+TGG | 0.566754 | 5_2:-62304144 | Msa0780550:CDS |
| TTCACTTTCAAATATCCCGA+TGG | 0.569594 | 5_2:+62306815 | None:intergenic |
| ATCGTGATGCAGGTGGAGCA+GGG | 0.576443 | 5_2:-62303948 | Msa0780550:CDS |
| CAACATGGGATATAAACCAT+CGG | 0.579239 | 5_2:-62306831 | Msa0780550:CDS |
| AGGCCAAGATCCATATGAGA+TGG | 0.579497 | 5_2:-62306906 | Msa0780550:CDS |
| TCCGAAAGGTGCAATCAACA+TGG | 0.580879 | 5_2:-62306846 | Msa0780550:CDS |
| GATTCATATTATACTAAACA+TGG | 0.583805 | 5_2:-62304620 | Msa0780550:CDS |
| AGTTAAGGCAGTAGTAACAT+TGG | 0.585447 | 5_2:-62302886 | Msa0780550:three_prime_UTR |
| CAAGATAAGAAAGCTTTCCA+TGG | 0.585662 | 5_2:-62304530 | Msa0780550:CDS |
| GTATCTAACTCTTCCAAACA+TGG | 0.585852 | 5_2:+62302639 | None:intergenic |
| AATTTGATCCACTTCCTCCA+GGG | 0.587189 | 5_2:-62306706 | Msa0780550:CDS |
| CTACTTACAGAGCTAAGACC+AGG | 0.590912 | 5_2:+62305048 | None:intergenic |
| TCCCAAGATACTCATATGGA+AGG | 0.591524 | 5_2:-62304596 | Msa0780550:CDS |
| AACTCAATCCACAATTCTCG+AGG | 0.592657 | 5_2:-62304152 | Msa0780550:CDS |
| TACAGGATGAGTTGTTTAAG+GGG | 0.596582 | 5_2:-62303993 | Msa0780550:intron |
| TCTGTTGCAGATATGACGTA+TGG | 0.596987 | 5_2:-62307022 | Msa0780550:CDS |
| TCGGGATATTTGAAAGTGAA+GGG | 0.597023 | 5_2:-62306812 | Msa0780550:CDS |
| CCAAAATCTCACAACAGGAT+CGG | 0.602237 | 5_2:-62308219 | Msa0780550:five_prime_UTR |
| AGTCTGCATGTTTGACTGGG+AGG | 0.604885 | 5_2:+62304312 | None:intergenic |
| CTAGATTGACATGAATATGA+GGG | 0.607282 | 5_2:+62302571 | None:intergenic |
| TCGTGCGGAAGCAGTAAGCA+TGG | 0.609438 | 5_2:-62307106 | Msa0780550:CDS |
| ATTTGATCCACTTCCTCCAG+GGG | 0.610594 | 5_2:-62306705 | Msa0780550:CDS |
| CAGATATGACGTATGGACGC+AGG | 0.612034 | 5_2:-62307015 | Msa0780550:CDS |
| TCATCCTCGCTAAAGCTAGA+CGG | 0.613881 | 5_2:+62303000 | None:intergenic |
| CTGTGGATACTGAAGAAAGA+GGG | 0.615063 | 5_2:-62304127 | Msa0780550:CDS |
| TCCACAGTGAAAAGTCGACC+TGG | 0.615507 | 5_2:-62305066 | Msa0780550:CDS |
| GTTCCTGCCAGGAAAACGAC+TGG | 0.617478 | 5_2:+62304475 | None:intergenic |
| AAGCAATATCGTGATGCAGG+TGG | 0.619203 | 5_2:-62303955 | Msa0780550:CDS |
| TCAAATTCTACACCAAGTAG+TGG | 0.621557 | 5_2:+62306722 | None:intergenic |
| CAAGAACGTATGTATCCTCA+AGG | 0.624443 | 5_2:-62306926 | Msa0780550:CDS |
| CCTAAAGAGGTTGAGAGCAA+CGG | 0.628717 | 5_2:-62307064 | Msa0780550:CDS |
| ATTGAAATTAGCAATTGCTG+AGG | 0.629418 | 5_2:-62307281 | Msa0780550:CDS |
| GGAAGTCTGCATGTTTGACT+GGG | 0.632535 | 5_2:+62304309 | None:intergenic |
| CAGAAAAGCAAGTTTCTGGG+TGG | 0.634139 | 5_2:-62307246 | Msa0780550:CDS |
| CTTCCACCCTTAAATCCGAA+AGG | 0.637927 | 5_2:-62306860 | Msa0780550:CDS |
| GGGCGACAAGATCGTTCAAG+TGG | 0.643385 | 5_2:-62307166 | Msa0780550:CDS |
| AGTGGTGTCATCCAGGATCG+TGG | 0.644469 | 5_2:-62307148 | Msa0780550:CDS |
| AAAATCAAAAGACCTAGTGG+GGG | 0.645462 | 5_2:+62302762 | None:intergenic |
| CTGTTAAGAAGCAATTAGGA+AGG | 0.648535 | 5_2:-62306763 | Msa0780550:CDS |
| CAGACAAATCACGATTGTAG+AGG | 0.656746 | 5_2:+62307041 | None:intergenic |
| TCTGTGGATACTGAAGAAAG+AGG | 0.660423 | 5_2:-62304128 | Msa0780550:CDS |
| CCGAAAGGTGCAATCAACAT+GGG | 0.662695 | 5_2:-62306845 | Msa0780550:CDS |
| CCAATCCAAAGAATGTGCAA+AGG | 0.663942 | 5_2:-62304265 | Msa0780550:CDS |
| TGGCATTCAAATGCCCCTGG+AGG | 0.673262 | 5_2:+62306692 | None:intergenic |
| GCACCTTTCGGATTTAAGGG+TGG | 0.674376 | 5_2:+62306857 | None:intergenic |
| TAGAACCAAGGAAAGCTCAG+AGG | 0.675746 | 5_2:-62303716 | Msa0780550:intron |
| CAAGGAGCTTGTGATTAAGG+CGG | 0.678761 | 5_2:+62308377 | None:intergenic |
| CATAAGAAGGATGCCAAGCG+CGG | 0.680844 | 5_2:-62304392 | Msa0780550:CDS |
| TCAATCCAAAGAAAGCGCAA+AGG | 0.687671 | 5_2:-62304202 | Msa0780550:CDS |
| GGACTTGGGCAAGATTCGTG+CGG | 0.690813 | 5_2:-62307121 | Msa0780550:CDS |
| AAATCAAAAGACCTAGTGGG+GGG | 0.693291 | 5_2:+62302763 | None:intergenic |
| ACAGGATGAGTTGTTTAAGG+GGG | 0.696588 | 5_2:-62303992 | Msa0780550:intron |
| AGAGCACAAATATCCGACAG+AGG | 0.722247 | 5_2:-62307305 | Msa0780550:CDS |
| GATGCCGTCTAGCTTTAGCG+AGG | 0.724075 | 5_2:-62303004 | Msa0780550:CDS |
| AGAAGAAAATAAAGTCTCCG+CGG | 0.726053 | 5_2:-62307470 | Msa0780550:CDS |
| ACAAAACAATCAATCCAGTG+AGG | 0.737591 | 5_2:+62302960 | None:intergenic |
| CTGTTGCTGAGATAGAACCA+AGG | 0.743299 | 5_2:-62303728 | Msa0780550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTATAATTGAAATT+AGG | - | chr5_2:62303120-62303139 | Msa0780550:intron | 10.0% |
| !!! | TTTTTGTTGTTATAATTATT+TGG | - | chr5_2:62303308-62303327 | Msa0780550:intron | 10.0% |
| !! | ACAAAAAAAAGATCTAAATT+AGG | + | chr5_2:62303181-62303200 | None:intergenic | 15.0% |
| !!! | TGTTAATATATTTTATCCAA+AGG | - | chr5_2:62303677-62303696 | Msa0780550:intron | 15.0% |
| !!! | GTTAATATATTTTATCCAAA+GGG | - | chr5_2:62303678-62303697 | Msa0780550:intron | 15.0% |
| !! | CATAAAATAATTTAAATGTC+TGG | + | chr5_2:62304859-62304878 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTCAAAACTGTA+AGG | - | chr5_2:62304938-62304957 | Msa0780550:intron | 15.0% |
| !!! | TTAATTAGTTTCCTTAAAAT+CGG | - | chr5_2:62305274-62305293 | Msa0780550:intron | 15.0% |
| !!! | GTCTTTTGATTTTTATTTTT+GGG | - | chr5_2:62308291-62308310 | Msa0780550:five_prime_UTR | 15.0% |
| !!! | TTTTTTTTGTAGTTTAATTG+TGG | - | chr5_2:62308345-62308364 | Msa0780550:five_prime_UTR | 15.0% |
| !!! | TTTTATTCTTATTAGCGATT+TGG | - | chr5_2:62302896-62302915 | Msa0780550:three_prime_UTR | 20.0% |
| !! | TTTATTCTTATTAGCGATTT+GGG | - | chr5_2:62302897-62302916 | Msa0780550:three_prime_UTR | 20.0% |
| !! | TTATGAAAAATTCTCAGATA+TGG | - | chr5_2:62303381-62303400 | Msa0780550:intron | 20.0% |
| !! | TTTCACATAACTAATAGAAT+GGG | + | chr5_2:62304433-62304452 | None:intergenic | 20.0% |
| !! | CTTATCAAGTTAATTATCAT+TGG | + | chr5_2:62304749-62304768 | None:intergenic | 20.0% |
| !!! | CAATGATAATTAACTTGATA+AGG | - | chr5_2:62304747-62304766 | Msa0780550:intron | 20.0% |
| !!! | TTCTTTTCACATATGATTTA+GGG | - | chr5_2:62304806-62304825 | Msa0780550:intron | 20.0% |
| !! | AGTTGTATAACATAAATGAA+TGG | + | chr5_2:62305185-62305204 | None:intergenic | 20.0% |
| !! | ATTCATTTATGTTATACAAC+TGG | - | chr5_2:62305184-62305203 | Msa0780550:intron | 20.0% |
| !! | ATGATGCTATTCTTAAAATT+TGG | - | chr5_2:62305434-62305453 | Msa0780550:intron | 20.0% |
| !!! | GAAATATTTCTAGAAAAACA+TGG | + | chr5_2:62305784-62305803 | None:intergenic | 20.0% |
| !! | AATTAAATGACTTGAAACAA+TGG | + | chr5_2:62306241-62306260 | None:intergenic | 20.0% |
| !!! | TTGCAAGAGAAATTTTTAAA+CGG | - | chr5_2:62306259-62306278 | Msa0780550:intron | 20.0% |
| !! | AATTACTATGAGTACTTATA+TGG | + | chr5_2:62306303-62306322 | None:intergenic | 20.0% |
| !! | GATTCATATTATACTAAACA+TGG | - | chr5_2:62306423-62306442 | Msa0780550:intron | 20.0% |
| !!! | TGTTTTCATAGTTATATTGT+AGG | + | chr5_2:62306758-62306777 | None:intergenic | 20.0% |
| !!! | GGTCTTTTGATTTTTATTTT+TGG | - | chr5_2:62308290-62308309 | Msa0780550:five_prime_UTR | 20.0% |
| ! | ATGTAACGTAAAAGAGAAAA+GGG | + | chr5_2:62302735-62302754 | None:intergenic | 25.0% |
| ! | AATGTAACGTAAAAGAGAAA+AGG | + | chr5_2:62302736-62302755 | None:intergenic | 25.0% |
| !! | ACATTCTCTTTTACGTTAAA+TGG | - | chr5_2:62302751-62302770 | Msa0780550:three_prime_UTR | 25.0% |
| !! | CATTCTCTTTTACGTTAAAT+GGG | - | chr5_2:62302752-62302771 | Msa0780550:three_prime_UTR | 25.0% |
| ! | GTTGAAATTGAATCAATGTT+AGG | - | chr5_2:62302958-62302977 | Msa0780550:exon | 25.0% |
| ! | TTAGGTTAGAATCTACAATA+GGG | - | chr5_2:62302976-62302995 | Msa0780550:CDS | 25.0% |
| ! | GACATAAAGGACTTAAATTT+GGG | - | chr5_2:62303040-62303059 | Msa0780550:intron | 25.0% |
| ! | ACATAAAGGACTTAAATTTG+GGG | - | chr5_2:62303041-62303060 | Msa0780550:intron | 25.0% |
| ! | AGTTAAAGAAATAAGCTTTC+TGG | - | chr5_2:62303355-62303374 | Msa0780550:intron | 25.0% |
| ! | ATAAGATATACAACAATCAC+AGG | + | chr5_2:62303465-62303484 | None:intergenic | 25.0% |
| !! | ATCTTTTATCCTTTAACCTT+CGG | + | chr5_2:62303831-62303850 | None:intergenic | 25.0% |
| ! | GTTTCACATAACTAATAGAA+TGG | + | chr5_2:62304434-62304453 | None:intergenic | 25.0% |
| !! | GTGAAACTAAAATGTTGTTT+AGG | - | chr5_2:62304447-62304466 | Msa0780550:CDS | 25.0% |
| ! | CATCACATTGTAAAATTGTT+AGG | - | chr5_2:62304525-62304544 | Msa0780550:CDS | 25.0% |
| ! | TCTTAGTATTAATACTACCA+AGG | - | chr5_2:62304723-62304742 | Msa0780550:intron | 25.0% |
| !! | CTTCTTTTCACATATGATTT+AGG | - | chr5_2:62304805-62304824 | Msa0780550:intron | 25.0% |
| ! | TAATAAATTGAGCTGCAAAA+AGG | + | chr5_2:62304975-62304994 | None:intergenic | 25.0% |
| ! | GAATTAGTATTTGTTTGATC+TGG | - | chr5_2:62305014-62305033 | Msa0780550:intron | 25.0% |
| ! | ACATATAAATAGACAGATGT+AGG | - | chr5_2:62305058-62305077 | Msa0780550:CDS | 25.0% |
| ! | TAACATAAATGAATGGTCAA+AGG | + | chr5_2:62305178-62305197 | None:intergenic | 25.0% |
| !! | TTTATCTAGTCCATATTTTG+AGG | - | chr5_2:62305241-62305260 | Msa0780550:intron | 25.0% |
| !!! | TTATCTAGTCCATATTTTGA+GGG | - | chr5_2:62305242-62305261 | Msa0780550:intron | 25.0% |
| ! | AGGTATTAGCATTAGAATAT+AGG | - | chr5_2:62305331-62305350 | Msa0780550:intron | 25.0% |
| ! | TCAACAACTATATTAGAATC+TGG | - | chr5_2:62305567-62305586 | Msa0780550:intron | 25.0% |
| ! | CAACAACTATATTAGAATCT+GGG | - | chr5_2:62305568-62305587 | Msa0780550:intron | 25.0% |
| ! | AGAATAATAATCTTTGTGCA+AGG | - | chr5_2:62305713-62305732 | Msa0780550:intron | 25.0% |
| ! | AGAGCAAAAATAAGTTATCT+TGG | + | chr5_2:62305759-62305778 | None:intergenic | 25.0% |
| ! | GAAATATTTCATTGTAGCTA+AGG | - | chr5_2:62305794-62305813 | Msa0780550:intron | 25.0% |
| ! | TTCTTACCTTTGTATTGTTA+TGG | - | chr5_2:62305895-62305914 | Msa0780550:intron | 25.0% |
| ! | AAAATGAGAATGCATTAGAA+AGG | + | chr5_2:62306022-62306041 | None:intergenic | 25.0% |
| ! | AAAATTAAATGCAGCTGAAA+TGG | - | chr5_2:62306123-62306142 | Msa0780550:intron | 25.0% |
| ! | CAATTTATTCTGCTTACAAA+TGG | - | chr5_2:62306998-62307017 | Msa0780550:CDS | 25.0% |
| !! | ATAATCACATTCTAGAGATA+CGG | + | chr5_2:62307167-62307186 | None:intergenic | 25.0% |
| ! | AATGTTCAATAGTAAGCTTT+CGG | - | chr5_2:62307476-62307495 | Msa0780550:CDS | 25.0% |
| ! | ATCTTCATTAAAGAGGAAAA+AGG | + | chr5_2:62307552-62307571 | None:intergenic | 25.0% |
| !!! | TCTTCTTACTTAGTTTTTAC+TGG | - | chr5_2:62307957-62307976 | Msa0780550:intron | 25.0% |
| !!! | TTTCTTTTTTCAAAGGCAAT+AGG | + | chr5_2:62308243-62308262 | None:intergenic | 25.0% |
| !! | TTGCCTTTGAAAAAAGAAAT+TGG | - | chr5_2:62308244-62308263 | Msa0780550:five_prime_UTR | 25.0% |
| !!! | ACACCAATTTCTTTTTTCAA+AGG | + | chr5_2:62308250-62308269 | None:intergenic | 25.0% |
| ! | TAAAAATCAAAAGACCTAGT+GGG | + | chr5_2:62308286-62308305 | None:intergenic | 25.0% |
| ! | ATAAAAATCAAAAGACCTAG+TGG | + | chr5_2:62308287-62308306 | None:intergenic | 25.0% |
| GTTAGGAACAAAGAAAAACA+AGG | + | chr5_2:62302687-62302706 | None:intergenic | 30.0% | |
| TCAATTTGACCCTTGAAATT+GGG | + | chr5_2:62302709-62302728 | None:intergenic | 30.0% | |
| TTCAATTTGACCCTTGAAAT+TGG | + | chr5_2:62302710-62302729 | None:intergenic | 30.0% | |
| TTCCAAATTCTTCACAACAA+TGG | - | chr5_2:62302849-62302868 | Msa0780550:three_prime_UTR | 30.0% | |
| TTCCATTGTTGTGAAGAATT+TGG | + | chr5_2:62302854-62302873 | None:intergenic | 30.0% | |
| AAATTCTTCACAACAATGGA+AGG | - | chr5_2:62302853-62302872 | Msa0780550:three_prime_UTR | 30.0% | |
| GTTAGGTTAGAATCTACAAT+AGG | - | chr5_2:62302975-62302994 | Msa0780550:CDS | 30.0% | |
| CGACATAAAGGACTTAAATT+TGG | - | chr5_2:62303039-62303058 | Msa0780550:intron | 30.0% | |
| AGAAAGTGAGTCAAACTTAA+CGG | - | chr5_2:62303077-62303096 | Msa0780550:intron | 30.0% | |
| TCAAACTTAACGGTATGAAA+GGG | - | chr5_2:62303087-62303106 | Msa0780550:intron | 30.0% | |
| TCATGTATGAGATTTCATGT+TGG | - | chr5_2:62303404-62303423 | Msa0780550:intron | 30.0% | |
| TTCAACAAAAATCATCCCTT+TGG | + | chr5_2:62303696-62303715 | None:intergenic | 30.0% | |
| ATTGAAATTAGCAATTGCTG+AGG | - | chr5_2:62303762-62303781 | Msa0780550:CDS | 30.0% | |
| AAAGAAGAAGCAAATGCTAA+TGG | - | chr5_2:62303856-62303875 | Msa0780550:intron | 30.0% | |
| AAGAAGAAGCAAATGCTAAT+GGG | - | chr5_2:62303857-62303876 | Msa0780550:intron | 30.0% | |
| !! | CATTTTTCTGAAAATGTCAG+TGG | - | chr5_2:62304054-62304073 | Msa0780550:intron | 30.0% |
| AGAGCTTTACTATATCTAGA+AGG | + | chr5_2:62304165-62304184 | None:intergenic | 30.0% | |
| ATAACTAATAGAATGGGAAC+TGG | + | chr5_2:62304427-62304446 | None:intergenic | 30.0% | |
| ! | TGTTGTTTAGGTTTGAAACT+TGG | - | chr5_2:62304459-62304478 | Msa0780550:CDS | 30.0% |
| ! | GTTTGAAACTTGGAACAATA+TGG | - | chr5_2:62304469-62304488 | Msa0780550:CDS | 30.0% |
| AACAATATGGCTGATCATTT+AGG | - | chr5_2:62304482-62304501 | Msa0780550:CDS | 30.0% | |
| TGAATGCTTAAAGATAGATC+TGG | - | chr5_2:62304571-62304590 | Msa0780550:CDS | 30.0% | |
| GAATGCTTAAAGATAGATCT+GGG | - | chr5_2:62304572-62304591 | Msa0780550:CDS | 30.0% | |
| ATGTTTATGTGCTATGGATT+GGG | - | chr5_2:62304662-62304681 | Msa0780550:intron | 30.0% | |
| ! | AAGTTAATTATCATTGGCCT+TGG | + | chr5_2:62304743-62304762 | None:intergenic | 30.0% |
| ATAAATAGACAGATGTAGGT+AGG | - | chr5_2:62305062-62305081 | Msa0780550:CDS | 30.0% | |
| ATATACAGTGAGAAAATGAG+AGG | - | chr5_2:62305092-62305111 | Msa0780550:CDS | 30.0% | |
| ! | GAATAAGCTATCCGATTTTA+AGG | + | chr5_2:62305288-62305307 | None:intergenic | 30.0% |
| ATGCTAATACCTTAAAAGCA+CGG | + | chr5_2:62305323-62305342 | None:intergenic | 30.0% | |
| AGCATTAGAATATAGGTTCT+AGG | - | chr5_2:62305338-62305357 | Msa0780550:intron | 30.0% | |
| TCGATCCTAAATATGATACT+GGG | + | chr5_2:62305412-62305431 | None:intergenic | 30.0% | |
| !! | CTTACAAGACAGTTTTGTAA+GGG | + | chr5_2:62305483-62305502 | None:intergenic | 30.0% |
| AACCCAAAAAGGTAGTTTAA+GGG | - | chr5_2:62305599-62305618 | Msa0780550:intron | 30.0% | |
| TAGCATCCATAACAATACAA+AGG | + | chr5_2:62305904-62305923 | None:intergenic | 30.0% | |
| CATGGGAAAACTTAATTACT+AGG | + | chr5_2:62306053-62306072 | None:intergenic | 30.0% | |
| ! | CTAGTAATTAAGTTTTCCCA+TGG | - | chr5_2:62306051-62306070 | Msa0780550:intron | 30.0% |
| ! | AATTAAGTTTTCCCATGGAA+TGG | - | chr5_2:62306056-62306075 | Msa0780550:intron | 30.0% |
| ! | ATTAAGTTTTCCCATGGAAT+GGG | - | chr5_2:62306057-62306076 | Msa0780550:intron | 30.0% |
| AAGCAAAGGTAAGAAGTTTA+AGG | + | chr5_2:62306175-62306194 | None:intergenic | 30.0% | |
| AACTTCTTACCTTTGCTTAA+AGG | - | chr5_2:62306177-62306196 | Msa0780550:intron | 30.0% | |
| ACTTCTTACCTTTGCTTAAA+GGG | - | chr5_2:62306178-62306197 | Msa0780550:intron | 30.0% | |
| ! | TCTTATTTCCCTTTAAGCAA+AGG | + | chr5_2:62306189-62306208 | None:intergenic | 30.0% |
| AAGAAGTGAAAGATGTTTGT+AGG | - | chr5_2:62306205-62306224 | Msa0780550:intron | 30.0% | |
| ! | TTTGTCTATGTTTGTTACCA+TGG | + | chr5_2:62306533-62306552 | None:intergenic | 30.0% |
| AGAGTCTTCATACAAATCTA+AGG | + | chr5_2:62306598-62306617 | None:intergenic | 30.0% | |
| CATCACTAAGAATCATAAGA+AGG | - | chr5_2:62306638-62306657 | Msa0780550:intron | 30.0% | |
| ! | ATATTTTGTTGCATGTGTAC+AGG | - | chr5_2:62307033-62307052 | Msa0780550:CDS | 30.0% |
| ! | TAATCACATTCTAGAGATAC+GGG | + | chr5_2:62307166-62307185 | None:intergenic | 30.0% |
| ! | TTTTGCTTTGGTATGTGTAT+AGG | - | chr5_2:62307238-62307257 | Msa0780550:CDS | 30.0% |
| TCAACCATACAATATGAAAC+AGG | - | chr5_2:62307289-62307308 | Msa0780550:CDS | 30.0% | |
| !! | CGATTTTCTGAAAGCATAAT+AGG | + | chr5_2:62307445-62307464 | None:intergenic | 30.0% |
| !! | AAAAAGGTGGTTTTCAAGAA+TGG | + | chr5_2:62307536-62307555 | None:intergenic | 30.0% |
| TTCATTAAAGAGGAAAAAGG+TGG | + | chr5_2:62307549-62307568 | None:intergenic | 30.0% | |
| TCCTCTTTAATGAAGATAAG+AGG | - | chr5_2:62307555-62307574 | Msa0780550:intron | 30.0% | |
| TCCTCTTATCTTCATTAAAG+AGG | + | chr5_2:62307559-62307578 | None:intergenic | 30.0% | |
| AGTAAGAAGATAAAACTGTG+AGG | + | chr5_2:62307947-62307966 | None:intergenic | 30.0% | |
| !! | TACTTAGTTTTTACTGGATG+TGG | - | chr5_2:62307963-62307982 | Msa0780550:intron | 30.0% |
| CACATGCAATTTACTAGTTA+AGG | - | chr5_2:62308142-62308161 | Msa0780550:intron | 30.0% | |
| AAAAATCAAAAGACCTAGTG+GGG | + | chr5_2:62308285-62308304 | None:intergenic | 30.0% | |
| !!! | TATTTTTGGGCATTTGATGT+AGG | - | chr5_2:62308304-62308323 | Msa0780550:five_prime_UTR | 30.0% |
| AAACAAGGAGCTTGTGATTA+AGG | + | chr5_2:62302672-62302691 | None:intergenic | 35.0% | |
| TTGTTCCTAACCCAATTTCA+AGG | - | chr5_2:62302696-62302715 | Msa0780550:three_prime_UTR | 35.0% | |
| TGTTCCTAACCCAATTTCAA+GGG | - | chr5_2:62302697-62302716 | Msa0780550:three_prime_UTR | 35.0% | |
| !!! | TGAGATTTTGGGGTCAAAAA+AGG | + | chr5_2:62302815-62302834 | None:intergenic | 35.0% |
| ! | GATTTGGGTCATTCATTTTG+TGG | - | chr5_2:62302912-62302931 | Msa0780550:three_prime_UTR | 35.0% |
| ATAGGGATTGTTTGCATTAC+TGG | - | chr5_2:62302993-62303012 | Msa0780550:CDS | 35.0% | |
| TAGGGATTGTTTGCATTACT+GGG | - | chr5_2:62302994-62303013 | Msa0780550:CDS | 35.0% | |
| ! | GACTTAAATTTGGGGTCTTT+GGG | - | chr5_2:62303049-62303068 | Msa0780550:intron | 35.0% |
| GTCAAACTTAACGGTATGAA+AGG | - | chr5_2:62303086-62303105 | Msa0780550:intron | 35.0% | |
| CAAACTTAACGGTATGAAAG+GGG | - | chr5_2:62303088-62303107 | Msa0780550:intron | 35.0% | |
| AAGTAGATCCAAGTGGTTTA+TGG | + | chr5_2:62303218-62303237 | None:intergenic | 35.0% | |
| TCTACTTTCTGTGTGAGATA+AGG | - | chr5_2:62303231-62303250 | Msa0780550:intron | 35.0% | |
| CTACTTTCTGTGTGAGATAA+GGG | - | chr5_2:62303232-62303251 | Msa0780550:intron | 35.0% | |
| GAACTAAACTTCTTGCTTCT+CGG | - | chr5_2:62303520-62303539 | Msa0780550:intron | 35.0% | |
| AGAAGAAAATAAAGTCTCCG+CGG | - | chr5_2:62303573-62303592 | Msa0780550:intron | 35.0% | |
| ! | GGGCTTGGAGAAATTTTATA+CGG | - | chr5_2:62303639-62303658 | Msa0780550:intron | 35.0% |
| ! | GGCTTGGAGAAATTTTATAC+GGG | - | chr5_2:62303640-62303659 | Msa0780550:intron | 35.0% |
| ! | TGGAGAAATTTTATACGGGT+AGG | - | chr5_2:62303644-62303663 | Msa0780550:intron | 35.0% |
| ! | GGAGAAATTTTATACGGGTA+GGG | - | chr5_2:62303645-62303664 | Msa0780550:intron | 35.0% |
| GCTAATTTCAATTCCTCTGT+CGG | + | chr5_2:62303754-62303773 | None:intergenic | 35.0% | |
| TTGACAGAAAAGCAAGTTTC+TGG | - | chr5_2:62303793-62303812 | Msa0780550:intron | 35.0% | |
| TGACAGAAAAGCAAGTTTCT+GGG | - | chr5_2:62303794-62303813 | Msa0780550:intron | 35.0% | |
| ! | TTTTATCCTTTAACCTTCGG+TGG | + | chr5_2:62303828-62303847 | None:intergenic | 35.0% |
| GCATGGTGATTATAAGTATC+TGG | - | chr5_2:62303954-62303973 | Msa0780550:CDS | 35.0% | |
| TAAGTATCTGGATCCTAAAG+AGG | - | chr5_2:62303966-62303985 | Msa0780550:CDS | 35.0% | |
| ! | TTCTGAAAATGTCAGTGGAA+TGG | - | chr5_2:62304059-62304078 | Msa0780550:intron | 35.0% |
| ATTGCACCTTTCGGATTTAA+GGG | + | chr5_2:62304192-62304211 | None:intergenic | 35.0% | |
| CAACATGGGATATAAACCAT+CGG | - | chr5_2:62304212-62304231 | Msa0780550:CDS | 35.0% | |
| AACATGGGATATAAACCATC+GGG | - | chr5_2:62304213-62304232 | Msa0780550:CDS | 35.0% | |
| TTCACTTTCAAATATCCCGA+TGG | + | chr5_2:62304231-62304250 | None:intergenic | 35.0% | |
| ATCGGGATATTTGAAAGTGA+AGG | - | chr5_2:62304230-62304249 | Msa0780550:CDS | 35.0% | |
| TCGGGATATTTGAAAGTGAA+GGG | - | chr5_2:62304231-62304250 | Msa0780550:CDS | 35.0% | |
| ACTGCTGTTAAGAAGCAATT+AGG | - | chr5_2:62304276-62304295 | Msa0780550:CDS | 35.0% | |
| CTGTTAAGAAGCAATTAGGA+AGG | - | chr5_2:62304280-62304299 | Msa0780550:CDS | 35.0% | |
| GCAATTAGGAAGGAATTATC+AGG | - | chr5_2:62304290-62304309 | Msa0780550:CDS | 35.0% | |
| TCAAATTCTACACCAAGTAG+TGG | + | chr5_2:62304324-62304343 | None:intergenic | 35.0% | |
| ATGGGAACTGGAAAGAAAAA+GGG | + | chr5_2:62304415-62304434 | None:intergenic | 35.0% | |
| AATGGGAACTGGAAAGAAAA+AGG | + | chr5_2:62304416-62304435 | None:intergenic | 35.0% | |
| ! | TGGCTGATCATTTAGGATAA+AGG | - | chr5_2:62304489-62304508 | Msa0780550:CDS | 35.0% |
| TAAACATGATGCAGGTTAGA+AGG | + | chr5_2:62304649-62304668 | None:intergenic | 35.0% | |
| ATAGCACATAAACATGATGC+AGG | + | chr5_2:62304657-62304676 | None:intergenic | 35.0% | |
| TGCATCATGTTTATGTGCTA+TGG | - | chr5_2:62304656-62304675 | Msa0780550:intron | 35.0% | |
| CATGTTTATGTGCTATGGAT+TGG | - | chr5_2:62304661-62304680 | Msa0780550:intron | 35.0% | |
| ! | AATGTCTGGCTTACAAGTTA+TGG | + | chr5_2:62304845-62304864 | None:intergenic | 35.0% |
| !!! | GAGCTTTTAGTTTTAGTGTC+AGG | - | chr5_2:62304897-62304916 | Msa0780550:intron | 35.0% |
| ACTATTAGTGTATCGAGGTA+TGG | + | chr5_2:62305130-62305149 | None:intergenic | 35.0% | |
| TCTTGACTATTAGTGTATCG+AGG | + | chr5_2:62305135-62305154 | None:intergenic | 35.0% | |
| ! | AAAAGCACGGCATTATCTTT+AGG | + | chr5_2:62305310-62305329 | None:intergenic | 35.0% |
| ! | AAGATAATGCCGTGCTTTTA+AGG | - | chr5_2:62305311-62305330 | Msa0780550:intron | 35.0% |
| !! | TTAGAATATAGGTTCTAGGC+TGG | - | chr5_2:62305342-62305361 | Msa0780550:intron | 35.0% |
| AGTGTCCCAGTATCATATTT+AGG | - | chr5_2:62305404-62305423 | Msa0780550:intron | 35.0% | |
| GTCGATCCTAAATATGATAC+TGG | + | chr5_2:62305413-62305432 | None:intergenic | 35.0% | |
| !! | GACAGTTTTGTAAGGGTTAA+GGG | + | chr5_2:62305476-62305495 | None:intergenic | 35.0% |
| !! | AGACAGTTTTGTAAGGGTTA+AGG | + | chr5_2:62305477-62305496 | None:intergenic | 35.0% |
| !! | CCTTACAAGACAGTTTTGTA+AGG | + | chr5_2:62305484-62305503 | None:intergenic | 35.0% |
| CCTTACAAAACTGTCTTGTA+AGG | - | chr5_2:62305481-62305500 | Msa0780550:intron | 35.0% | |
| CAAAACTGTCTTGTAAGGTA+AGG | - | chr5_2:62305486-62305505 | Msa0780550:intron | 35.0% | |
| ATGTGGTGCTTATAAAGCTT+AGG | + | chr5_2:62305516-62305535 | None:intergenic | 35.0% | |
| ! | AAGCTTTATAAGCACCACAT+AGG | - | chr5_2:62305516-62305535 | Msa0780550:intron | 35.0% |
| CAACCCAAAAAGGTAGTTTA+AGG | - | chr5_2:62305598-62305617 | Msa0780550:intron | 35.0% | |
| ACCCAAAAAGGTAGTTTAAG+GGG | - | chr5_2:62305600-62305619 | Msa0780550:intron | 35.0% | |
| CGTTTGCTCAAGTCTTTATA+AGG | - | chr5_2:62305626-62305645 | Msa0780550:intron | 35.0% | |
| !!! | AGGTGTTGTTTTGCTTGTTT+AGG | - | chr5_2:62305733-62305752 | Msa0780550:intron | 35.0% |
| CAGTTGCTACATTTATGAAC+AGG | + | chr5_2:62306339-62306358 | None:intergenic | 35.0% | |
| TCCTTCCATATGAGTATCTT+GGG | + | chr5_2:62306451-62306470 | None:intergenic | 35.0% | |
| CAAGATAAGAAAGCTTTCCA+TGG | - | chr5_2:62306513-62306532 | Msa0780550:intron | 35.0% | |
| GATTTGTATGAAGACTCTAC+TGG | - | chr5_2:62306600-62306619 | Msa0780550:intron | 35.0% | |
| TTTCTTCATAGCGATCACTA+TGG | + | chr5_2:62306710-62306729 | None:intergenic | 35.0% | |
| ! | GAATTGTGGATTGAGTTTGA+AGG | + | chr5_2:62306888-62306907 | None:intergenic | 35.0% |
| TGTACAGGATGAGTTGTTTA+AGG | - | chr5_2:62307048-62307067 | Msa0780550:CDS | 35.0% | |
| GTACAGGATGAGTTGTTTAA+GGG | - | chr5_2:62307049-62307068 | Msa0780550:CDS | 35.0% | |
| TACAGGATGAGTTGTTTAAG+GGG | - | chr5_2:62307050-62307069 | Msa0780550:CDS | 35.0% | |
| AAAAAGCAATATCGTGATGC+AGG | - | chr5_2:62307085-62307104 | Msa0780550:CDS | 35.0% | |
| GATGCTTTCAAATGAGACTA+TGG | - | chr5_2:62307117-62307136 | Msa0780550:CDS | 35.0% | |
| GGAACCTGTTTCATATTGTA+TGG | + | chr5_2:62307296-62307315 | None:intergenic | 35.0% | |
| TAAGCTCCAAAACTTCTAAG+AGG | + | chr5_2:62307389-62307408 | None:intergenic | 35.0% | |
| !! | TTTACAAAGGTGCTTCTAGT+GGG | + | chr5_2:62307663-62307682 | None:intergenic | 35.0% |
| !!! | TTTTACAAAGGTGCTTCTAG+TGG | + | chr5_2:62307664-62307683 | None:intergenic | 35.0% |
| !! | CTAGAAGCACCTTTGTAAAA+AGG | - | chr5_2:62307664-62307683 | Msa0780550:intron | 35.0% |
| ! | TAGGGCATACCTTTTTACAA+AGG | + | chr5_2:62307676-62307695 | None:intergenic | 35.0% |
| AGAAGATAAAACTGTGAGGT+TGG | + | chr5_2:62307943-62307962 | None:intergenic | 35.0% | |
| GCACAATGTTGTTAGAAACA+GGG | + | chr5_2:62307989-62308008 | None:intergenic | 35.0% | |
| TGCACAATGTTGTTAGAAAC+AGG | + | chr5_2:62307990-62308009 | None:intergenic | 35.0% | |
| ACAAAACAATCAATCCAGTG+AGG | + | chr5_2:62308086-62308105 | None:intergenic | 35.0% | |
| AGTTAAGGCAGTAGTAACAT+TGG | - | chr5_2:62308157-62308176 | Msa0780550:intron | 35.0% | |
| AAAATCAAAAGACCTAGTGG+GGG | + | chr5_2:62308284-62308303 | None:intergenic | 35.0% | |
| GATCCAATTTAGTCCATGTT+TGG | - | chr5_2:62308391-62308410 | Msa0780550:five_prime_UTR | 35.0% | |
| ! | CTTCCAAACATGGACTAAAT+TGG | + | chr5_2:62308397-62308416 | None:intergenic | 35.0% |
| GTATCTAACTCTTCCAAACA+TGG | + | chr5_2:62308407-62308426 | None:intergenic | 35.0% | |
| TTGACCCTTGAAATTGGGTT+AGG | + | chr5_2:62302704-62302723 | None:intergenic | 40.0% | |
| ! | GATCCTGTTGTGAGATTTTG+GGG | + | chr5_2:62302825-62302844 | None:intergenic | 40.0% |
| ! | CGATCCTGTTGTGAGATTTT+GGG | + | chr5_2:62302826-62302845 | None:intergenic | 40.0% |
| CCAAAATCTCACAACAGGAT+CGG | - | chr5_2:62302824-62302843 | Msa0780550:three_prime_UTR | 40.0% | |
| TACTGGGTAGATTGTTGCAA+TGG | - | chr5_2:62303010-62303029 | Msa0780550:CDS | 40.0% | |
| !! | CAATGGTGGATTCGACATAA+AGG | - | chr5_2:62303027-62303046 | Msa0780550:intron | 40.0% |
| ! | GGACTTAAATTTGGGGTCTT+TGG | - | chr5_2:62303048-62303067 | Msa0780550:intron | 40.0% |
| TTAACGGTATGAAAGGGGTT+TGG | - | chr5_2:62303093-62303112 | Msa0780550:intron | 40.0% | |
| GTCATTGACCATAAACCACT+TGG | - | chr5_2:62303207-62303226 | Msa0780550:intron | 40.0% | |
| ACACAGAAAGTAGATCCAAG+TGG | + | chr5_2:62303225-62303244 | None:intergenic | 40.0% | |
| TAAACTTCTTGCTTCTCGGT+TGG | - | chr5_2:62303524-62303543 | Msa0780550:intron | 40.0% | |
| !!! | GCGGAGACTTTATTTTCTTC+TGG | + | chr5_2:62303574-62303593 | None:intergenic | 40.0% |
| !! | GGCGTTTTGAGCTTTCTTTT+CGG | + | chr5_2:62303607-62303626 | None:intergenic | 40.0% |
| CAGACAAATCACGATTGTAG+AGG | + | chr5_2:62304005-62304024 | None:intergenic | 40.0% | |
| TCTGTTGCAGATATGACGTA+TGG | - | chr5_2:62304021-62304040 | Msa0780550:intron | 40.0% | |
| CAAGAACGTATGTATCCTCA+AGG | - | chr5_2:62304117-62304136 | Msa0780550:CDS | 40.0% | |
| GATTGCACCTTTCGGATTTA+AGG | + | chr5_2:62304193-62304212 | None:intergenic | 40.0% | |
| GGAAGGAATTATCAGGAAGA+TGG | - | chr5_2:62304297-62304316 | Msa0780550:CDS | 40.0% | |
| AATTTGATCCACTTCCTCCA+GGG | - | chr5_2:62304337-62304356 | Msa0780550:CDS | 40.0% | |
| TGGGAACTGGAAAGAAAAAG+GGG | + | chr5_2:62304414-62304433 | None:intergenic | 40.0% | |
| !! | AGATAGATCTGGGTTTGCTA+TGG | - | chr5_2:62304582-62304601 | Msa0780550:CDS | 40.0% |
| !! | GATAGATCTGGGTTTGCTAT+GGG | - | chr5_2:62304583-62304602 | Msa0780550:CDS | 40.0% |
| ! | TTCTAGAAATAACCTACCCC+AGG | + | chr5_2:62304609-62304628 | None:intergenic | 40.0% |
| !! | GGGGTAGGTTATTTCTAGAA+TGG | - | chr5_2:62304609-62304628 | Msa0780550:CDS | 40.0% |
| !! | GTCCATATTTTGAGGGTTTG+TGG | - | chr5_2:62305249-62305268 | Msa0780550:intron | 40.0% |
| AGCCACAAACCCTCAAAATA+TGG | + | chr5_2:62305254-62305273 | None:intergenic | 40.0% | |
| TAAGGGTTAAGGGTTGAGTT+AGG | + | chr5_2:62305466-62305485 | None:intergenic | 40.0% | |
| ! | GCCCCTTAAACTACCTTTTT+GGG | + | chr5_2:62305604-62305623 | None:intergenic | 40.0% |
| GGGTCTTAACTTAAGGTTCA+TGG | - | chr5_2:62305679-62305698 | Msa0780550:intron | 40.0% | |
| TAACTTAAGGTTCATGGCAC+TGG | - | chr5_2:62305685-62305704 | Msa0780550:intron | 40.0% | |
| AACTTAAGGTTCATGGCACT+GGG | - | chr5_2:62305686-62305705 | Msa0780550:intron | 40.0% | |
| TTCATTGTAGCTAAGGTGCA+AGG | - | chr5_2:62305801-62305820 | Msa0780550:intron | 40.0% | |
| TCAGCAATATGGTATGGTTC+TGG | + | chr5_2:62305929-62305948 | None:intergenic | 40.0% | |
| ! | CTTTTCACTGTGGAGATTTC+TGG | + | chr5_2:62305971-62305990 | None:intergenic | 40.0% |
| CGATATCAATCCCATTCCAT+GGG | + | chr5_2:62306070-62306089 | None:intergenic | 40.0% | |
| ACGATATCAATCCCATTCCA+TGG | + | chr5_2:62306071-62306090 | None:intergenic | 40.0% | |
| TGAAAGAGAGTGAGAAAGCA+GGG | + | chr5_2:62306382-62306401 | None:intergenic | 40.0% | |
| TGGTTCCCAAGATACTCATA+TGG | - | chr5_2:62306443-62306462 | Msa0780550:intron | 40.0% | |
| TCCCAAGATACTCATATGGA+AGG | - | chr5_2:62306447-62306466 | Msa0780550:intron | 40.0% | |
| CTCCTTCCATATGAGTATCT+TGG | + | chr5_2:62306452-62306471 | None:intergenic | 40.0% | |
| ! | CATATGGAAGGAGTTGACTT+TGG | - | chr5_2:62306459-62306478 | Msa0780550:intron | 40.0% |
| GTTGCATGATGTTCATGTTC+AGG | - | chr5_2:62306485-62306504 | Msa0780550:intron | 40.0% | |
| CCTTTGCACATTCTTTGGAT+TGG | + | chr5_2:62306781-62306800 | None:intergenic | 40.0% | |
| CCAATCCAAAGAATGTGCAA+AGG | - | chr5_2:62306778-62306797 | Msa0780550:CDS | 40.0% | |
| ACACTCCTTTGCACATTCTT+TGG | + | chr5_2:62306786-62306805 | None:intergenic | 40.0% | |
| ! | TCAATCCAAAGAAAGCGCAA+AGG | - | chr5_2:62306841-62306860 | Msa0780550:CDS | 40.0% |
| AACTCAATCCACAATTCTCG+AGG | - | chr5_2:62306891-62306910 | Msa0780550:CDS | 40.0% | |
| TCTGTGGATACTGAAGAAAG+AGG | - | chr5_2:62306915-62306934 | Msa0780550:CDS | 40.0% | |
| CTGTGGATACTGAAGAAAGA+GGG | - | chr5_2:62306916-62306935 | Msa0780550:CDS | 40.0% | |
| AAGAAAGAGGGCTATCTTCT+AGG | - | chr5_2:62306928-62306947 | Msa0780550:CDS | 40.0% | |
| !! | GCTATCTTCTAGGATGACTA+AGG | - | chr5_2:62306938-62306957 | Msa0780550:CDS | 40.0% |
| ACAGGATGAGTTGTTTAAGG+GGG | - | chr5_2:62307051-62307070 | Msa0780550:CDS | 40.0% | |
| ! | GCACACATGATGTTTTGCTT+TGG | - | chr5_2:62307226-62307245 | Msa0780550:CDS | 40.0% |
| ! | CAAAACTTCTAAGAGGACGT+GGG | + | chr5_2:62307382-62307401 | None:intergenic | 40.0% |
| TTGGTAAATTGAGCTCAACG+TGG | - | chr5_2:62307605-62307624 | Msa0780550:intron | 40.0% | |
| ! | TAAAAAGGTATGCCCTAGCA+GGG | - | chr5_2:62307679-62307698 | Msa0780550:intron | 40.0% |
| GACTAAACTAAACCCTGCTA+GGG | + | chr5_2:62307694-62307713 | None:intergenic | 40.0% | |
| AAAATCACAAGGTGTGGGAT+GGG | + | chr5_2:62307716-62307735 | None:intergenic | 40.0% | |
| AAGGCAAAATCACAAGGTGT+GGG | + | chr5_2:62307721-62307740 | None:intergenic | 40.0% | |
| GGTTTGAAGGCAAAATCACA+AGG | + | chr5_2:62307727-62307746 | None:intergenic | 40.0% | |
| ! | GTGATTTTGCCTTCAAACCT+CGG | - | chr5_2:62307728-62307747 | Msa0780550:intron | 40.0% |
| ATTCACTTGTAGTCAAACCG+AGG | + | chr5_2:62307748-62307767 | None:intergenic | 40.0% | |
| !!! | CTGTTTTTTCCAGCTAACCA+AGG | + | chr5_2:62307846-62307865 | None:intergenic | 40.0% |
| !! | TGTGAGGTTGGTGTGTATTT+GGG | + | chr5_2:62307931-62307950 | None:intergenic | 40.0% |
| AAATCAAAAGACCTAGTGGG+GGG | + | chr5_2:62308283-62308302 | None:intergenic | 40.0% | |
| CAAGGAGCTTGTGATTAAGG+CGG | + | chr5_2:62302669-62302688 | None:intergenic | 45.0% | |
| TGACCCCAAAATCTCACAAC+AGG | - | chr5_2:62302819-62302838 | Msa0780550:three_prime_UTR | 45.0% | |
| ! | CCGATCCTGTTGTGAGATTT+TGG | + | chr5_2:62302827-62302846 | None:intergenic | 45.0% |
| TGGGTAGATTGTTGCAATGG+TGG | - | chr5_2:62303013-62303032 | Msa0780550:CDS | 45.0% | |
| GAGATAAGGGTTTGCACTGA+AGG | - | chr5_2:62303245-62303264 | Msa0780550:intron | 45.0% | |
| ! | TCTTTTCGGAAACTTCTCCG+CGG | + | chr5_2:62303593-62303612 | None:intergenic | 45.0% |
| AAAACGCCTGCACAGCTTAA+GGG | - | chr5_2:62303619-62303638 | Msa0780550:intron | 45.0% | |
| TCTGTCGGATATTTGTGCTC+TGG | + | chr5_2:62303739-62303758 | None:intergenic | 45.0% | |
| AGAGCACAAATATCCGACAG+AGG | - | chr5_2:62303738-62303757 | Msa0780550:CDS | 45.0% | |
| ! | CAGAAAAGCAAGTTTCTGGG+TGG | - | chr5_2:62303797-62303816 | Msa0780550:intron | 45.0% |
| ! | GTTTTGCCACCGAAGGTTAA+AGG | - | chr5_2:62303819-62303838 | Msa0780550:intron | 45.0% |
| CCTAAAGAGGTTGAGAGCAA+CGG | - | chr5_2:62303979-62303998 | Msa0780550:CDS | 45.0% | |
| !! | TCATATGGATCTTGGCCTTG+AGG | + | chr5_2:62304135-62304154 | None:intergenic | 45.0% |
| AGGCCAAGATCCATATGAGA+TGG | - | chr5_2:62304137-62304156 | Msa0780550:CDS | 45.0% | |
| GCTCCATCTCATATGGATCT+TGG | + | chr5_2:62304143-62304162 | None:intergenic | 45.0% | |
| CTAGAAGGCTCCATCTCATA+TGG | + | chr5_2:62304150-62304169 | None:intergenic | 45.0% | |
| CTTCCACCCTTAAATCCGAA+AGG | - | chr5_2:62304183-62304202 | Msa0780550:CDS | 45.0% | |
| ! | TCCGAAAGGTGCAATCAACA+TGG | - | chr5_2:62304197-62304216 | Msa0780550:CDS | 45.0% |
| ! | CCCATGTTGATTGCACCTTT+CGG | + | chr5_2:62304201-62304220 | None:intergenic | 45.0% |
| ! | CCGAAAGGTGCAATCAACAT+GGG | - | chr5_2:62304198-62304217 | Msa0780550:CDS | 45.0% |
| GAATTTGATCCACTTCCTCC+AGG | - | chr5_2:62304336-62304355 | Msa0780550:CDS | 45.0% | |
| ATTTGATCCACTTCCTCCAG+GGG | - | chr5_2:62304338-62304357 | Msa0780550:CDS | 45.0% | |
| CATGAACTGCGTCTTCAGTT+TGG | + | chr5_2:62304374-62304393 | None:intergenic | 45.0% | |
| CAAACTGAAGACGCAGTTCA+TGG | - | chr5_2:62304372-62304391 | Msa0780550:CDS | 45.0% | |
| GGAACTGGAAAGAAAAAGGG+GGG | + | chr5_2:62304412-62304431 | None:intergenic | 45.0% | |
| GGGAACTGGAAAGAAAAAGG+GGG | + | chr5_2:62304413-62304432 | None:intergenic | 45.0% | |
| GAGCGTGAAGTTTGTAGTAG+TGG | - | chr5_2:62305372-62305391 | Msa0780550:intron | 45.0% | |
| GACTAGAGTTACGACCTATG+TGG | + | chr5_2:62305533-62305552 | None:intergenic | 45.0% | |
| TAGGTCGTAACTCTAGTCGA+TGG | - | chr5_2:62305535-62305554 | Msa0780550:intron | 45.0% | |
| AGGTCGTAACTCTAGTCGAT+GGG | - | chr5_2:62305536-62305555 | Msa0780550:intron | 45.0% | |
| ! | CGCCCCTTAAACTACCTTTT+TGG | + | chr5_2:62305605-62305624 | None:intergenic | 45.0% |
| CGATGCAGGGTCTTAACTTA+AGG | - | chr5_2:62305672-62305691 | Msa0780550:intron | 45.0% | |
| GCAGGATCAGCAATATGGTA+TGG | + | chr5_2:62305935-62305954 | None:intergenic | 45.0% | |
| GAAGAGCAGGATCAGCAATA+TGG | + | chr5_2:62305940-62305959 | None:intergenic | 45.0% | |
| TCTGGAGAATTCAGAAGAGC+AGG | + | chr5_2:62305953-62305972 | None:intergenic | 45.0% | |
| CTACTTACAGAGCTAAGACC+AGG | + | chr5_2:62305998-62306017 | None:intergenic | 45.0% | |
| AAAGAGAGTGAGAAAGCAGG+GGG | + | chr5_2:62306380-62306399 | None:intergenic | 45.0% | |
| GAAAGAGAGTGAGAAAGCAG+GGG | + | chr5_2:62306381-62306400 | None:intergenic | 45.0% | |
| GTGAAAGAGAGTGAGAAAGC+AGG | + | chr5_2:62306383-62306402 | None:intergenic | 45.0% | |
| !! | AGTAATGCCAGTCGTTTTCC+TGG | - | chr5_2:62306561-62306580 | Msa0780550:intron | 45.0% |
| GGAAGTCTGCATGTTTGACT+GGG | + | chr5_2:62306737-62306756 | None:intergenic | 45.0% | |
| AGGAAGTCTGCATGTTTGAC+TGG | + | chr5_2:62306738-62306757 | None:intergenic | 45.0% | |
| TCACTCCTTTGCGCTTTCTT+TGG | + | chr5_2:62306849-62306868 | None:intergenic | 45.0% | |
| ATGAGTTGTTTAAGGGGGAC+AGG | - | chr5_2:62307056-62307075 | Msa0780550:CDS | 45.0% | |
| AAGCAATATCGTGATGCAGG+TGG | - | chr5_2:62307088-62307107 | Msa0780550:CDS | 45.0% | |
| AAACATCATGTGTGCGTGCA+TGG | + | chr5_2:62307221-62307240 | None:intergenic | 45.0% | |
| !! | CTTGGTTCTATCTCAGCAAC+AGG | + | chr5_2:62307317-62307336 | None:intergenic | 45.0% |
| CTGTTGCTGAGATAGAACCA+AGG | - | chr5_2:62307315-62307334 | Msa0780550:intron | 45.0% | |
| TAGAACCAAGGAAAGCTCAG+AGG | - | chr5_2:62307327-62307346 | Msa0780550:intron | 45.0% | |
| ! | CCAAAACTTCTAAGAGGACG+TGG | + | chr5_2:62307383-62307402 | None:intergenic | 45.0% |
| ! | CCACGTCCTCTTAGAAGTTT+TGG | - | chr5_2:62307380-62307399 | Msa0780550:intron | 45.0% |
| !! | AGCGTAAAGTGCTGCTTAGT+TGG | - | chr5_2:62307586-62307605 | Msa0780550:intron | 45.0% |
| ! | AAGGTGCTTCTAGTGGGATT+CGG | + | chr5_2:62307657-62307676 | None:intergenic | 45.0% |
| ! | GTAAAAAGGTATGCCCTAGC+AGG | - | chr5_2:62307678-62307697 | Msa0780550:intron | 45.0% |
| GGACTAAACTAAACCCTGCT+AGG | + | chr5_2:62307695-62307714 | None:intergenic | 45.0% | |
| CAAAATCACAAGGTGTGGGA+TGG | + | chr5_2:62307717-62307736 | None:intergenic | 45.0% | |
| GAAGGCAAAATCACAAGGTG+TGG | + | chr5_2:62307722-62307741 | None:intergenic | 45.0% | |
| GTAGTCAAACCGAGGTTTGA+AGG | + | chr5_2:62307740-62307759 | None:intergenic | 45.0% | |
| !! | GTGAGGTTGGTGTGTATTTG+GGG | + | chr5_2:62307930-62307949 | None:intergenic | 45.0% |
| !! | CTGTGAGGTTGGTGTGTATT+TGG | + | chr5_2:62307932-62307951 | None:intergenic | 45.0% |
| TCATCCTCGCTAAAGCTAGA+CGG | + | chr5_2:62308046-62308065 | None:intergenic | 45.0% | |
| CAATCAATCCAGTGAGGAAC+TGG | + | chr5_2:62308080-62308099 | None:intergenic | 45.0% | |
| !! | AATTTATTAATATTTGTATT+TGG | - | chr5_2:62304986-62305005 | Msa0780550:intron | 5.0% |
| CAAAACGCCTGCACAGCTTA+AGG | - | chr5_2:62303618-62303637 | Msa0780550:intron | 50.0% | |
| !! | TCGTTCAAGTGGTGTCATCC+AGG | - | chr5_2:62303888-62303907 | Msa0780550:intron | 50.0% |
| CCGTTGCTCTCAACCTCTTT+AGG | + | chr5_2:62303982-62304001 | None:intergenic | 50.0% | |
| CAGATATGACGTATGGACGC+AGG | - | chr5_2:62304028-62304047 | Msa0780550:intron | 50.0% | |
| GCACCTTTCGGATTTAAGGG+TGG | + | chr5_2:62304189-62304208 | None:intergenic | 50.0% | |
| CAGGAAGATGGTCCACTACT+TGG | - | chr5_2:62304309-62304328 | Msa0780550:CDS | 50.0% | |
| GTTTGGCATTCAAATGCCCC+TGG | + | chr5_2:62304357-62304376 | None:intergenic | 50.0% | |
| CTGAAGACGCAGTTCATGGT+AGG | - | chr5_2:62304376-62304395 | Msa0780550:CDS | 50.0% | |
| CTACAAACTTCACGCTCCAG+AGG | + | chr5_2:62305369-62305388 | None:intergenic | 50.0% | |
| GGGCTCAACTCAACCCAAAA+AGG | - | chr5_2:62305588-62305607 | Msa0780550:intron | 50.0% | |
| GTTAAGACCCTGCATCGAGT+GGG | + | chr5_2:62305669-62305688 | None:intergenic | 50.0% | |
| AGTTAAGACCCTGCATCGAG+TGG | + | chr5_2:62305670-62305689 | None:intergenic | 50.0% | |
| TCCACAGTGAAAAGTCGACC+TGG | - | chr5_2:62305977-62305996 | Msa0780550:intron | 50.0% | |
| !! | ACCAGGTCGACTTTTCACTG+TGG | + | chr5_2:62305981-62306000 | None:intergenic | 50.0% |
| TCTAAGGAAGAGTTCCTGCC+AGG | + | chr5_2:62306582-62306601 | None:intergenic | 50.0% | |
| CATAAGAAGGATGCCAAGCG+CGG | - | chr5_2:62306651-62306670 | Msa0780550:intron | 50.0% | |
| AGTCTGCATGTTTGACTGGG+AGG | + | chr5_2:62306734-62306753 | None:intergenic | 50.0% | |
| CCACAGAACCTCGAGAATTG+TGG | + | chr5_2:62306902-62306921 | None:intergenic | 50.0% | |
| CCACAATTCTCGAGGTTCTG+TGG | - | chr5_2:62306899-62306918 | Msa0780550:CDS | 50.0% | |
| ATCATGTGTGCGTGCATGGA+AGG | + | chr5_2:62307217-62307236 | None:intergenic | 50.0% | |
| ! | TTCTAAGAGGACGTGGGTGT+CGG | + | chr5_2:62307376-62307395 | None:intergenic | 50.0% |
| TGCTGATACCAGTTCCTCAC+TGG | - | chr5_2:62308069-62308088 | Msa0780550:intron | 50.0% | |
| TCCAAGCCCTTAAGCTGTGC+AGG | + | chr5_2:62303628-62303647 | None:intergenic | 55.0% | |
| GGGCGACAAGATCGTTCAAG+TGG | - | chr5_2:62303877-62303896 | Msa0780550:intron | 55.0% | |
| !! | AGTGGTGTCATCCAGGATCG+TGG | - | chr5_2:62303895-62303914 | Msa0780550:intron | 55.0% |
| ! | AGGATCGTGGCAGTGGACTT+GGG | - | chr5_2:62303908-62303927 | Msa0780550:intron | 55.0% |
| GGACTTGGGCAAGATTCGTG+CGG | - | chr5_2:62303922-62303941 | Msa0780550:intron | 55.0% | |
| TCGTGCGGAAGCAGTAAGCA+TGG | - | chr5_2:62303937-62303956 | Msa0780550:CDS | 55.0% | |
| TCAAATGCCCCTGGAGGAAG+TGG | + | chr5_2:62304348-62304367 | None:intergenic | 55.0% | |
| TGGCATTCAAATGCCCCTGG+AGG | + | chr5_2:62304354-62304373 | None:intergenic | 55.0% | |
| !! | ATCTGGGTTTGCTATGGGCC+TGG | - | chr5_2:62304588-62304607 | Msa0780550:CDS | 55.0% |
| !! | TCTGGGTTTGCTATGGGCCT+GGG | - | chr5_2:62304589-62304608 | Msa0780550:CDS | 55.0% |
| !! | TAGGTTCTAGGCTGGACCTC+TGG | - | chr5_2:62305350-62305369 | Msa0780550:intron | 55.0% |
| TCCATATGCCCACTCGATGC+AGG | - | chr5_2:62305658-62305677 | Msa0780550:intron | 55.0% | |
| CCATATGCCCACTCGATGCA+GGG | - | chr5_2:62305659-62305678 | Msa0780550:intron | 55.0% | |
| !! | ATGCCAGTCGTTTTCCTGGC+AGG | - | chr5_2:62306565-62306584 | Msa0780550:intron | 55.0% |
| GTTCCTGCCAGGAAAACGAC+TGG | + | chr5_2:62306571-62306590 | None:intergenic | 55.0% | |
| TATCGTGATGCAGGTGGAGC+AGG | - | chr5_2:62307094-62307113 | Msa0780550:CDS | 55.0% | |
| ATCGTGATGCAGGTGGAGCA+GGG | - | chr5_2:62307095-62307114 | Msa0780550:CDS | 55.0% | |
| ATGTGTGCGTGCATGGAAGG+AGG | + | chr5_2:62307214-62307233 | None:intergenic | 55.0% | |
| GCTCACCTCTGAGCTTTCCT+TGG | + | chr5_2:62307335-62307354 | None:intergenic | 55.0% | |
| TCTAAGAGGACGTGGGTGTC+GGG | + | chr5_2:62307375-62307394 | None:intergenic | 55.0% | |
| TATGTCCGCAGTCGTACGCA+AGG | - | chr5_2:62307816-62307835 | Msa0780550:intron | 55.0% | |
| ATGTCCGCAGTCGTACGCAA+GGG | - | chr5_2:62307817-62307836 | Msa0780550:intron | 55.0% | |
| CAAGGGACACCTTGGTTAGC+TGG | - | chr5_2:62307834-62307853 | Msa0780550:intron | 55.0% | |
| !! | GATGCCGTCTAGCTTTAGCG+AGG | - | chr5_2:62308039-62308058 | Msa0780550:intron | 55.0% |
| TAGAACTCCTACCCCCCACT+AGG | - | chr5_2:62308269-62308288 | Msa0780550:five_prime_UTR | 55.0% | |
| CAAAAGACCTAGTGGGGGGT+AGG | + | chr5_2:62308279-62308298 | None:intergenic | 55.0% | |
| GCCTGCACAGCTTAAGGGCT+TGG | - | chr5_2:62303624-62303643 | Msa0780550:intron | 60.0% | |
| !! | CTGGGTGGTTTTGCCACCGA+AGG | - | chr5_2:62303812-62303831 | Msa0780550:intron | 60.0% |
| GTCATCCAGGATCGTGGCAG+TGG | - | chr5_2:62303901-62303920 | Msa0780550:intron | 60.0% | |
| CAAGTCCACTGCCACGATCC+TGG | + | chr5_2:62303909-62303928 | None:intergenic | 60.0% | |
| ! | CAGGATCGTGGCAGTGGACT+TGG | - | chr5_2:62303907-62303926 | Msa0780550:intron | 60.0% |
| !! | CTGGGTTTGCTATGGGCCTG+GGG | - | chr5_2:62304590-62304609 | Msa0780550:CDS | 60.0% |
| !! | GTTTGCTATGGGCCTGGGGT+AGG | - | chr5_2:62304594-62304613 | Msa0780550:CDS | 60.0% |
| CCCTGCATCGAGTGGGCATA+TGG | + | chr5_2:62305662-62305681 | None:intergenic | 60.0% | |
| ! | GATGCCAAGCGCGGTGTTGA+GGG | - | chr5_2:62306660-62306679 | Msa0780550:intron | 60.0% |
| CATACCCTCAACACCGCGCT+TGG | + | chr5_2:62306667-62306686 | None:intergenic | 60.0% | |
| GTGTCCCTTGCGTACGACTG+CGG | + | chr5_2:62307824-62307843 | None:intergenic | 60.0% | |
| GTCGTACGCAAGGGACACCT+TGG | - | chr5_2:62307826-62307845 | Msa0780550:intron | 60.0% | |
| ! | GGATGCCAAGCGCGGTGTTG+AGG | - | chr5_2:62306659-62306678 | Msa0780550:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 62302586 | 62308479 | 62302586 | ID=Msa0780550;Name=Msa0780550 |
| chr5_2 | mRNA | 62302586 | 62308479 | 62302586 | ID=Msa0780550-mRNA-1;Parent=Msa0780550;Name=Msa0780550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=282|1|1|1|0.85|0.87|8|383|544 |
| chr5_2 | exon | 62302586 | 62303038 | 62302586 | ID=Msa0780550-mRNA-1:exon:18481;Parent=Msa0780550-mRNA-1 |
| chr5_2 | exon | 62303717 | 62303805 | 62303717 | ID=Msa0780550-mRNA-1:exon:18480;Parent=Msa0780550-mRNA-1 |
| chr5_2 | exon | 62303927 | 62304010 | 62303927 | ID=Msa0780550-mRNA-1:exon:18479;Parent=Msa0780550-mRNA-1 |
| chr5_2 | exon | 62304106 | 62304648 | 62304106 | ID=Msa0780550-mRNA-1:exon:18478;Parent=Msa0780550-mRNA-1 |
| chr5_2 | exon | 62305056 | 62305135 | 62305056 | ID=Msa0780550-mRNA-1:exon:18477;Parent=Msa0780550-mRNA-1 |
| chr5_2 | exon | 62306672 | 62307325 | 62306672 | ID=Msa0780550-mRNA-1:exon:18476;Parent=Msa0780550-mRNA-1 |
| chr5_2 | exon | 62307404 | 62307511 | 62307404 | ID=Msa0780550-mRNA-1:exon:18475;Parent=Msa0780550-mRNA-1 |
| chr5_2 | exon | 62308191 | 62308479 | 62308191 | ID=Msa0780550-mRNA-1:exon:18474;Parent=Msa0780550-mRNA-1 |
| chr5_2 | five_prime_UTR | 62308198 | 62308479 | 62308198 | ID=Msa0780550-mRNA-1:five_prime_utr;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62308191 | 62308197 | 62308191 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62307404 | 62307511 | 62307404 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62306672 | 62307325 | 62306672 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62305056 | 62305135 | 62305056 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62304106 | 62304648 | 62304106 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62303927 | 62304010 | 62303927 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62303717 | 62303805 | 62303717 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | CDS | 62302969 | 62303038 | 62302969 | ID=Msa0780550-mRNA-1:cds;Parent=Msa0780550-mRNA-1 |
| chr5_2 | three_prime_UTR | 62302586 | 62302968 | 62302586 | ID=Msa0780550-mRNA-1:three_prime_utr;Parent=Msa0780550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
