Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821920 | XP_003617278.1 | 91.728 | 544 | 9 | 4 | 1 | 508 | 1 | 544 | 0.0 | 1007 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821920 | sp|F4HY56|RLT1_ARATH | 36.364 | 209 | 99 | 7 | 20 | 228 | 41 | 215 | 1.55e-23 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821920 | G7K365 | 91.728 | 544 | 9 | 4 | 1 | 508 | 1 | 544 | 0.0 | 1007 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0821920 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0780550 | Msa0821920 | 0.953610 | 1.875503e-111 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821920 | MtrunA17_Chr5g0441991 | 91.728 | 544 | 9 | 4 | 1 | 508 | 1 | 544 | 0.0 | 1007 |
| Msa0821920 | MtrunA17_Chr3g0094681 | 54.253 | 529 | 197 | 8 | 1 | 507 | 1 | 506 | 2.34e-173 | 498 |
| Msa0821920 | MtrunA17_Chr4g0046591 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 2.31e-13 | 73.2 |
| Msa0821920 | MtrunA17_Chr2g0282771 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 9.15e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821920 | AT4G03250.1 | 40.074 | 539 | 255 | 18 | 3 | 508 | 4 | 507 | 9.21e-82 | 263 |
| Msa0821920 | AT1G28420.1 | 36.364 | 209 | 99 | 7 | 20 | 228 | 41 | 215 | 1.58e-24 | 108 |
Find 133 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTTGACCCTTGAAAA+TGG | 0.138748 | 5_3:+60328936 | None:intergenic |
| TGTACAGGATGAGTTGTTTA+AGG | 0.209194 | 5_3:-60324618 | Msa0821920:intron |
| CTTCCAAACATGGACTAAAT+TGG | 0.226621 | 5_3:+60323273 | None:intergenic |
| ACACTCCTTTGCACATTCTT+TGG | 0.238382 | 5_3:+60324883 | None:intergenic |
| TTGACAGAAAAGCAAGTTTC+TGG | 0.241531 | 5_3:-60327858 | Msa0821920:CDS |
| TCACTCCTTTGCGCTTTCTT+TGG | 0.251232 | 5_3:+60324820 | None:intergenic |
| CTTCCATTGTTGTGAAGAAT+TGG | 0.251363 | 5_3:+60328791 | None:intergenic |
| AAGAAAGAGGGCTATCTTCT+AGG | 0.323284 | 5_3:-60324738 | Msa0821920:CDS |
| CAGGATCGTGGCAGTGGACT+TGG | 0.326571 | 5_3:-60327744 | Msa0821920:CDS |
| CTGAAAAGTTTGTCTATGTT+TGG | 0.340704 | 5_3:+60325128 | None:intergenic |
| CAAAACGCCTGCACAGCTTA+AGG | 0.344150 | 5_3:-60328033 | Msa0821920:CDS |
| ACTGCTGTTAAGAAGCAATT+AGG | 0.344355 | 5_3:-60327375 | Msa0821920:CDS |
| CACATGCAATTTACTAGTTA+AGG | 0.352181 | 5_3:-60323525 | Msa0821920:three_prime_UTR |
| CTCCTTCCATATGAGTATCT+TGG | 0.372564 | 5_3:+60325217 | None:intergenic |
| GGAACCTGTTTCATATTGTA+TGG | 0.374331 | 5_3:+60324373 | None:intergenic |
| GATCCAATTTAGTCCATGTT+TGG | 0.379275 | 5_3:-60323276 | Msa0821920:three_prime_UTR |
| CCTTTGCACATTCTTTGGAT+TGG | 0.379454 | 5_3:+60324888 | None:intergenic |
| CATGAACTGCGTCTTCAGTT+TGG | 0.394238 | 5_3:+60327280 | None:intergenic |
| AATGTAACGTAAAAGAGAAA+AGG | 0.394526 | 5_3:+60328910 | None:intergenic |
| TTGACCCTTGAAAATGGGTT+AGG | 0.397612 | 5_3:+60328942 | None:intergenic |
| TGACCCCAAAATCTCAAAAC+AGG | 0.398822 | 5_3:-60328824 | Msa0821920:five_prime_UTR |
| GCAATTAGGAAGGAATTATC+AGG | 0.404766 | 5_3:-60327361 | Msa0821920:CDS |
| CAATCAATCCAGTGAGGAAC+TGG | 0.405732 | 5_3:+60323590 | None:intergenic |
| TCCTTCCATATGAGTATCTT+GGG | 0.407012 | 5_3:+60325218 | None:intergenic |
| GCCTGCACAGCTTAAGGGCT+TGG | 0.407132 | 5_3:-60328027 | Msa0821920:CDS |
| TATCGTGATGCAGGTGGAGC+AGG | 0.408220 | 5_3:-60324572 | Msa0821920:CDS |
| CAAACTGAAGACGCAGTTCA+TGG | 0.411080 | 5_3:-60327279 | Msa0821920:intron |
| AGAGTCTTCATACAAATCTA+AGG | 0.411845 | 5_3:+60325071 | None:intergenic |
| AAAACGCCTGCACAGCTTAA+GGG | 0.413028 | 5_3:-60328032 | Msa0821920:CDS |
| GCTCACCTCTGAGCTTTCCT+TGG | 0.413393 | 5_3:+60324334 | None:intergenic |
| CTAGAAGGCTCCATCTCATA+TGG | 0.414116 | 5_3:+60327504 | None:intergenic |
| CTTGGTTCTATCTCAGCAAC+AGG | 0.414880 | 5_3:+60324352 | None:intergenic |
| AAAGAAGAAGCAAATGCTAA+TGG | 0.421245 | 5_3:-60327795 | Msa0821920:CDS |
| TTCCATTGTTGTGAAGAATT+GGG | 0.426427 | 5_3:+60328792 | None:intergenic |
| TCAACCATACAATATGAAAC+AGG | 0.427437 | 5_3:-60324377 | Msa0821920:CDS |
| CAAGTCCACTGCCACGATCC+TGG | 0.429748 | 5_3:+60327745 | None:intergenic |
| GATGCTTTCAAATGAGACTA+TGG | 0.432046 | 5_3:-60324549 | Msa0821920:intron |
| GAAGAGCAGGATCAGCAATA+TGG | 0.436376 | 5_3:+60325729 | None:intergenic |
| TCAATTTGACCCTTGAAAAT+GGG | 0.444361 | 5_3:+60328937 | None:intergenic |
| GTACAGGATGAGTTGTTTAA+GGG | 0.451788 | 5_3:-60324617 | Msa0821920:intron |
| CAGGAAGATGGTCCACTACT+TGG | 0.459717 | 5_3:-60327342 | Msa0821920:CDS |
| GCTCCATCTCATATGGATCT+TGG | 0.461565 | 5_3:+60327511 | None:intergenic |
| CATATGGAAGGAGTTGACTT+TGG | 0.462273 | 5_3:-60325207 | Msa0821920:CDS |
| TTTGTCTATGTTTGGTACCA+TGG | 0.463442 | 5_3:+60325136 | None:intergenic |
| TCAAATGCCCCTGGAGGAAG+TGG | 0.466413 | 5_3:+60327306 | None:intergenic |
| AGGAAGTCTGCATGTTTGAC+TGG | 0.467186 | 5_3:+60324931 | None:intergenic |
| TCCAAGCCCTTAAGCTGTGC+AGG | 0.467500 | 5_3:+60328026 | None:intergenic |
| GGATGCCAAGCGCGGTGTTG+AGG | 0.467670 | 5_3:-60325007 | Msa0821920:CDS |
| AGAGCTTTACTATATCTAGA+AGG | 0.474291 | 5_3:+60327489 | None:intergenic |
| CAAGGAGCTTGTGATGAAGT+TGG | 0.474357 | 5_3:+60328977 | None:intergenic |
| ATGTAACGTAAAAGAGAAAA+GGG | 0.479183 | 5_3:+60328911 | None:intergenic |
| AAGAAGAAGCAAATGCTAAT+GGG | 0.480312 | 5_3:-60327794 | Msa0821920:CDS |
| GCTAATTTCAATTCCTCTGT+CGG | 0.480787 | 5_3:+60327900 | None:intergenic |
| TGACAGAAAAGCAAGTTTCT+GGG | 0.481471 | 5_3:-60327857 | Msa0821920:CDS |
| TCTGGAGAATTCAGAAGAGC+AGG | 0.481510 | 5_3:+60325716 | None:intergenic |
| GTCATCCAGGATCGTGGCAG+TGG | 0.484263 | 5_3:-60327750 | Msa0821920:CDS |
| GATTTGTATGAAGACTCTAC+TGG | 0.484462 | 5_3:-60325066 | Msa0821920:CDS |
| GATGCCAAGCGCGGTGTTGA+GGG | 0.484892 | 5_3:-60325006 | Msa0821920:intron |
| GAATTTGATCCACTTCCTCC+AGG | 0.485743 | 5_3:-60327315 | Msa0821920:CDS |
| GTTTGGCATTCAAATGCCCC+TGG | 0.490524 | 5_3:+60327297 | None:intergenic |
| TGCTGATACCAGTTCCTCAC+TGG | 0.497663 | 5_3:-60323598 | Msa0821920:CDS |
| TGGTTCCCAAGATACTCATA+TGG | 0.513127 | 5_3:-60325223 | Msa0821920:CDS |
| AACATGGGATATAAACCATC+GGG | 0.519479 | 5_3:-60327438 | Msa0821920:CDS |
| CATACCCTCAACACCGCGCT+TGG | 0.522849 | 5_3:+60325002 | None:intergenic |
| TCGTTCAAGTGGTGTCATCC+AGG | 0.523322 | 5_3:-60327763 | Msa0821920:CDS |
| TCTAAGGAAGAGTTCCTGCC+AGG | 0.525417 | 5_3:+60325087 | None:intergenic |
| TTCTGAAAATGTCAGTGGAA+TGG | 0.528577 | 5_3:-60327592 | Msa0821920:CDS |
| TTCCCAATTCTTCACAACAA+TGG | 0.536988 | 5_3:-60328794 | Msa0821920:exon |
| GAATTGTGGATTGAGTTTGA+AGG | 0.540955 | 5_3:+60324781 | None:intergenic |
| ATCGGGATATTTGAAAGTGA+AGG | 0.542663 | 5_3:-60327421 | Msa0821920:CDS |
| GCAGGATCAGCAATATGGTA+TGG | 0.543728 | 5_3:+60325734 | None:intergenic |
| CATCACTAAGAATCATAAGA+AGG | 0.545103 | 5_3:-60325028 | Msa0821920:CDS |
| GCTATCTTCTAGGATGACTA+AGG | 0.550617 | 5_3:-60324728 | Msa0821920:intron |
| AGGATCGTGGCAGTGGACTT+GGG | 0.551473 | 5_3:-60327743 | Msa0821920:CDS |
| CAATTCTTCACAACAATGGA+AGG | 0.555876 | 5_3:-60328790 | Msa0821920:intron |
| GGAAGGAATTATCAGGAAGA+TGG | 0.556235 | 5_3:-60327354 | Msa0821920:CDS |
| CCACAGAACCTCGAGAATTG+TGG | 0.558056 | 5_3:+60324767 | None:intergenic |
| TCATATGGATCTTGGCCTTG+AGG | 0.561124 | 5_3:+60327519 | None:intergenic |
| CCACAATTCTCGAGGTTCTG+TGG | 0.566754 | 5_3:-60324767 | Msa0821920:CDS |
| TTCACTTTCAAATATCCCGA+TGG | 0.569594 | 5_3:+60327423 | None:intergenic |
| ATCGTGATGCAGGTGGAGCA+GGG | 0.576443 | 5_3:-60324571 | Msa0821920:CDS |
| CAACATGGGATATAAACCAT+CGG | 0.579239 | 5_3:-60327439 | Msa0821920:CDS |
| AGGCCAAGATCCATATGAGA+TGG | 0.579497 | 5_3:-60327514 | Msa0821920:CDS |
| TCCGAAAGGTGCAATCAACA+TGG | 0.580879 | 5_3:-60327454 | Msa0821920:intron |
| TCTGTTGCAGATGTGACGTA+TGG | 0.582357 | 5_3:-60327630 | Msa0821920:CDS |
| GATTCATATTATACTAAACA+TGG | 0.583805 | 5_3:-60325243 | Msa0821920:CDS |
| AGTTAAGGCAGTAGTAACAT+TGG | 0.585447 | 5_3:-60323510 | Msa0821920:three_prime_UTR |
| GTATCTAACTCTTCCAAACA+TGG | 0.585852 | 5_3:+60323263 | None:intergenic |
| AATTTGATCCACTTCCTCCA+GGG | 0.587189 | 5_3:-60327314 | Msa0821920:CDS |
| CTACTTACAGAGCTAAGACC+AGG | 0.590912 | 5_3:+60325671 | None:intergenic |
| TCCCAAGATACTCATATGGA+AGG | 0.591524 | 5_3:-60325219 | Msa0821920:CDS |
| AACTCAATCCACAATTCTCG+AGG | 0.592657 | 5_3:-60324775 | Msa0821920:CDS |
| CAAGATAAGAAAGCTTTCCA+TGG | 0.592693 | 5_3:-60325153 | Msa0821920:CDS |
| TACAGGATGAGTTGTTTAAG+GGG | 0.596582 | 5_3:-60324616 | Msa0821920:intron |
| TCGGGATATTTGAAAGTGAA+GGG | 0.597023 | 5_3:-60327420 | Msa0821920:CDS |
| CCAAAATCTCAAAACAGGAT+CGG | 0.602221 | 5_3:-60328819 | Msa0821920:five_prime_UTR |
| AGTCTGCATGTTTGACTGGG+AGG | 0.604885 | 5_3:+60324935 | None:intergenic |
| CTAGATTGACATGAATATGA+GGG | 0.607282 | 5_3:+60323195 | None:intergenic |
| TCGTGCGGAAGCAGTAAGCA+TGG | 0.609438 | 5_3:-60327714 | Msa0821920:intron |
| ATTTGATCCACTTCCTCCAG+GGG | 0.610594 | 5_3:-60327313 | Msa0821920:CDS |
| TCATCCTCGCTAAAGCTAGA+CGG | 0.613881 | 5_3:+60323624 | None:intergenic |
| CTGTGGATACTGAAGAAAGA+GGG | 0.615063 | 5_3:-60324750 | Msa0821920:CDS |
| TCCACAGTGAAAAGTCGACC+TGG | 0.615507 | 5_3:-60325689 | Msa0821920:CDS |
| GTTCCTGCCAGGAAAACGAC+TGG | 0.617478 | 5_3:+60325098 | None:intergenic |
| AAGCAATATCGTGATGCAGG+TGG | 0.619203 | 5_3:-60324578 | Msa0821920:CDS |
| TCAAATTCTACACCAAGTAG+TGG | 0.621557 | 5_3:+60327330 | None:intergenic |
| CAAGAACGTATGTATCCTCA+AGG | 0.624443 | 5_3:-60327534 | Msa0821920:CDS |
| CCTAAAGAGGTTGAGAGCAA+CGG | 0.628717 | 5_3:-60327672 | Msa0821920:intron |
| ATTGAAATTAGCAATTGCTG+AGG | 0.629418 | 5_3:-60327889 | Msa0821920:CDS |
| GGAAGTCTGCATGTTTGACT+GGG | 0.632535 | 5_3:+60324932 | None:intergenic |
| CAGAAAAGCAAGTTTCTGGG+TGG | 0.634139 | 5_3:-60327854 | Msa0821920:CDS |
| CAGATGTGACGTATGGACGC+AGG | 0.634541 | 5_3:-60327623 | Msa0821920:CDS |
| GGGCGACAAGATCGTTCAAG+TGG | 0.643385 | 5_3:-60327774 | Msa0821920:CDS |
| AGTGGTGTCATCCAGGATCG+TGG | 0.644469 | 5_3:-60327756 | Msa0821920:CDS |
| AAAATCAAAAGACCTAGTGG+GGG | 0.645462 | 5_3:+60323386 | None:intergenic |
| CTGTTAAGAAGCAATTAGGA+AGG | 0.648535 | 5_3:-60327371 | Msa0821920:CDS |
| CAGACAAATCACGATTGTAG+AGG | 0.656746 | 5_3:+60327649 | None:intergenic |
| GTTAGGAACAAAGCAAAACA+AGG | 0.656806 | 5_3:+60328959 | None:intergenic |
| TCTGTGGATACTGAAGAAAG+AGG | 0.660423 | 5_3:-60324751 | Msa0821920:CDS |
| CCGAAAGGTGCAATCAACAT+GGG | 0.662695 | 5_3:-60327453 | Msa0821920:intron |
| CCAATCCAAAGAATGTGCAA+AGG | 0.663942 | 5_3:-60324888 | Msa0821920:CDS |
| TGGCATTCAAATGCCCCTGG+AGG | 0.673262 | 5_3:+60327300 | None:intergenic |
| TAGAACCAAGGAAAGCTCAG+AGG | 0.675746 | 5_3:-60324339 | Msa0821920:intron |
| CATAAGAAGGATGCCAAGCG+CGG | 0.680844 | 5_3:-60325015 | Msa0821920:CDS |
| TCAATCCAAAGAAAGCGCAA+AGG | 0.687671 | 5_3:-60324825 | Msa0821920:CDS |
| GGACTTGGGCAAGATTCGTG+CGG | 0.690813 | 5_3:-60327729 | Msa0821920:CDS |
| AAATCAAAAGACCTAGTGGG+GGG | 0.693291 | 5_3:+60323387 | None:intergenic |
| ACAGGATGAGTTGTTTAAGG+GGG | 0.696588 | 5_3:-60324615 | Msa0821920:intron |
| AGAGCACAAATATCCGACAG+AGG | 0.722247 | 5_3:-60327913 | Msa0821920:CDS |
| GATGCCGTCTAGCTTTAGCG+AGG | 0.724075 | 5_3:-60323628 | Msa0821920:CDS |
| AGAAGAAAATAAAGTCTCCG+CGG | 0.726053 | 5_3:-60328078 | Msa0821920:CDS |
| ACAAAACAATCAATCCAGTG+AGG | 0.737591 | 5_3:+60323584 | None:intergenic |
| CTGTTGCTGAGATAGAACCA+AGG | 0.743299 | 5_3:-60324351 | Msa0821920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTATAATTGAAATT+AGG | - | chr5_3:60323748-60323767 | Msa0821920:intron | 10.0% |
| !!! | TTTTTGTTGTTATAATTATT+TGG | - | chr5_3:60323927-60323946 | Msa0821920:intron | 10.0% |
| !!! | TGTTAATATATTTTATCCAA+AGG | - | chr5_3:60324296-60324315 | Msa0821920:intron | 15.0% |
| !!! | GTTAATATATTTTATCCAAA+GGG | - | chr5_3:60324297-60324316 | Msa0821920:intron | 15.0% |
| !! | CATAAAATAATTTAAATGTC+TGG | + | chr5_3:60325478-60325497 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTCAAAACTGTA+AGG | - | chr5_3:60325557-60325576 | Msa0821920:intron | 15.0% |
| !!! | TTAATTAGTTTCCTTAAAAT+CGG | - | chr5_3:60325893-60325912 | Msa0821920:intron | 15.0% |
| !!! | GTCTTTTGATTTTTATTTTT+GGG | - | chr5_3:60328894-60328913 | Msa0821920:five_prime_UTR | 15.0% |
| !!! | TTTTTTTTGTAGTTTAATTG+TGG | - | chr5_3:60328948-60328967 | Msa0821920:five_prime_UTR | 15.0% |
| !! | ATGTATTCAAATTGAATCAA+TGG | - | chr5_3:60323581-60323600 | Msa0821920:exon | 20.0% |
| !! | TGACATAAATGACTTAAATT+TGG | - | chr5_3:60323667-60323686 | Msa0821920:intron | 20.0% |
| !! | GACATAAATGACTTAAATTT+GGG | - | chr5_3:60323668-60323687 | Msa0821920:intron | 20.0% |
| !! | ACATAAATGACTTAAATTTG+GGG | - | chr5_3:60323669-60323688 | Msa0821920:intron | 20.0% |
| !! | ACAGCAAAACAAAAAAAATT+AGG | + | chr5_3:60323809-60323828 | None:intergenic | 20.0% |
| !! | TTATGAAAAATTCTCAGATA+TGG | - | chr5_3:60324000-60324019 | Msa0821920:intron | 20.0% |
| !! | TTTCACATAACTAATAGAAT+GGG | + | chr5_3:60325052-60325071 | None:intergenic | 20.0% |
| !! | CTTATCAAGTTAATTATCAT+TGG | + | chr5_3:60325368-60325387 | None:intergenic | 20.0% |
| !!! | CAATGATAATTAACTTGATA+AGG | - | chr5_3:60325366-60325385 | Msa0821920:intron | 20.0% |
| !!! | TTCTTTTCACATATGATTTA+GGG | - | chr5_3:60325425-60325444 | Msa0821920:intron | 20.0% |
| !! | ACATATAAATAGACAGATTT+AGG | - | chr5_3:60325677-60325696 | Msa0821920:intron | 20.0% |
| !! | AGTTGTATAACATAAATGAA+TGG | + | chr5_3:60325804-60325823 | None:intergenic | 20.0% |
| !! | ATTCATTTATGTTATACAAC+TGG | - | chr5_3:60325803-60325822 | Msa0821920:intron | 20.0% |
| !! | ATGATGCTATTCTTAAAATT+TGG | - | chr5_3:60326053-60326072 | Msa0821920:intron | 20.0% |
| !!! | GAAATATTTCTAGAAAAACA+TGG | + | chr5_3:60326388-60326407 | None:intergenic | 20.0% |
| !! | AATTAAATGACTTGAAACAA+TGG | + | chr5_3:60326845-60326864 | None:intergenic | 20.0% |
| !! | AATTACTATGAGTACTTATA+TGG | + | chr5_3:60326907-60326926 | None:intergenic | 20.0% |
| !! | GATTCATATTATACTAAACA+TGG | - | chr5_3:60327027-60327046 | Msa0821920:intron | 20.0% |
| !!! | TGTTTTCATAGTTATATTGT+AGG | + | chr5_3:60327362-60327381 | None:intergenic | 20.0% |
| !!! | GGTCTTTTGATTTTTATTTT+TGG | - | chr5_3:60328893-60328912 | Msa0821920:five_prime_UTR | 20.0% |
| ! | ATGTAACGTAAAAGAGAAAA+GGG | + | chr5_3:60323362-60323381 | None:intergenic | 25.0% |
| ! | AATGTAACGTAAAAGAGAAA+AGG | + | chr5_3:60323363-60323382 | None:intergenic | 25.0% |
| !! | ACATTCTCTTTTACGTTAAA+TGG | - | chr5_3:60323378-60323397 | Msa0821920:three_prime_UTR | 25.0% |
| !! | CATTCTCTTTTACGTTAAAT+GGG | - | chr5_3:60323379-60323398 | Msa0821920:three_prime_UTR | 25.0% |
| !! | TTTTATTCTTATCAGCGATT+TGG | - | chr5_3:60323523-60323542 | Msa0821920:three_prime_UTR | 25.0% |
| ! | TTTATTCTTATCAGCGATTT+GGG | - | chr5_3:60323524-60323543 | Msa0821920:three_prime_UTR | 25.0% |
| ! | TTCAAATTGAATCAATGGTT+AGG | - | chr5_3:60323586-60323605 | Msa0821920:exon | 25.0% |
| ! | TTAGGTTAGAATCTACAATA+GGG | - | chr5_3:60323604-60323623 | Msa0821920:CDS | 25.0% |
| ! | AGTTAAAGAAATAAGCTTTC+TGG | - | chr5_3:60323974-60323993 | Msa0821920:intron | 25.0% |
| ! | ATAAGATATACAACAATCAC+AGG | + | chr5_3:60324084-60324103 | None:intergenic | 25.0% |
| !! | ATCTTTTATCCTTTAACCTT+CGG | + | chr5_3:60324450-60324469 | None:intergenic | 25.0% |
| ! | GTTTCACATAACTAATAGAA+TGG | + | chr5_3:60325053-60325072 | None:intergenic | 25.0% |
| !! | GTGAAACTAAAATGTTGTTT+AGG | - | chr5_3:60325066-60325085 | Msa0821920:CDS | 25.0% |
| ! | CATCACATTGTAAAATTGTT+AGG | - | chr5_3:60325144-60325163 | Msa0821920:CDS | 25.0% |
| ! | TCTTAGTATTAATACTACCA+AGG | - | chr5_3:60325342-60325361 | Msa0821920:intron | 25.0% |
| !! | CTTCTTTTCACATATGATTT+AGG | - | chr5_3:60325424-60325443 | Msa0821920:intron | 25.0% |
| ! | TAATAAATTGAGCTGCAAAA+AGG | + | chr5_3:60325594-60325613 | None:intergenic | 25.0% |
| ! | GAATTAGTATTTGTTTGATC+TGG | - | chr5_3:60325633-60325652 | Msa0821920:intron | 25.0% |
| ! | ATAAATAGACAGATTTAGGT+AGG | - | chr5_3:60325681-60325700 | Msa0821920:CDS | 25.0% |
| ! | TAACATAAATGAATGGTCAA+AGG | + | chr5_3:60325797-60325816 | None:intergenic | 25.0% |
| !! | TTTATCTAGTCCATATTTTG+AGG | - | chr5_3:60325860-60325879 | Msa0821920:intron | 25.0% |
| !!! | TTATCTAGTCCATATTTTGA+GGG | - | chr5_3:60325861-60325880 | Msa0821920:intron | 25.0% |
| ! | AGGTATTAGCATTAGAATAT+AGG | - | chr5_3:60325950-60325969 | Msa0821920:intron | 25.0% |
| ! | TCAACAACTATATTAGAATC+TGG | - | chr5_3:60326171-60326190 | Msa0821920:intron | 25.0% |
| ! | CAACAACTATATTAGAATCT+GGG | - | chr5_3:60326172-60326191 | Msa0821920:intron | 25.0% |
| ! | AGAATAATAATCTTTGTGCA+AGG | - | chr5_3:60326317-60326336 | Msa0821920:intron | 25.0% |
| ! | AGAGCAAAAATAAGTTATCT+TGG | + | chr5_3:60326363-60326382 | None:intergenic | 25.0% |
| ! | GAAATATTTCATTGTAGCTA+AGG | - | chr5_3:60326398-60326417 | Msa0821920:intron | 25.0% |
| ! | TTCTTACCTTTGTATTGTTA+TGG | - | chr5_3:60326499-60326518 | Msa0821920:intron | 25.0% |
| ! | AAAATGAGAATGCATTAGAA+AGG | + | chr5_3:60326626-60326645 | None:intergenic | 25.0% |
| ! | AAAATTAAATGCAGCTGAAA+TGG | - | chr5_3:60326727-60326746 | Msa0821920:intron | 25.0% |
| !! | TTGCAAGAGAAACTTTTAAA+CGG | - | chr5_3:60326863-60326882 | Msa0821920:intron | 25.0% |
| ! | CAATTTATTCTGCTTACAAA+TGG | - | chr5_3:60327602-60327621 | Msa0821920:CDS | 25.0% |
| !! | ATAATCACATTCTAGAGATA+CGG | + | chr5_3:60327771-60327790 | None:intergenic | 25.0% |
| ! | AATGTTCAATAGTAAGCTTT+CGG | - | chr5_3:60328080-60328099 | Msa0821920:CDS | 25.0% |
| ! | ATCTTCATTAAAGAGGAAAA+AGG | + | chr5_3:60328156-60328175 | None:intergenic | 25.0% |
| !!! | TCTTCTTACTTAGTTTTTAC+TGG | - | chr5_3:60328560-60328579 | Msa0821920:intron | 25.0% |
| !!! | TTTCTTTTTTCAAAGGCAAT+AGG | + | chr5_3:60328846-60328865 | None:intergenic | 25.0% |
| !! | TTGCCTTTGAAAAAAGAAAT+TGG | - | chr5_3:60328847-60328866 | Msa0821920:five_prime_UTR | 25.0% |
| !!! | ACACCAATTTCTTTTTTCAA+AGG | + | chr5_3:60328853-60328872 | None:intergenic | 25.0% |
| ! | TAAAAATCAAAAGACCTAGT+GGG | + | chr5_3:60328889-60328908 | None:intergenic | 25.0% |
| ! | ATAAAAATCAAAAGACCTAG+TGG | + | chr5_3:60328890-60328909 | None:intergenic | 25.0% |
| TCAATTTGACCCTTGAAAAT+GGG | + | chr5_3:60323336-60323355 | None:intergenic | 30.0% | |
| TTCAATTTGACCCTTGAAAA+TGG | + | chr5_3:60323337-60323356 | None:intergenic | 30.0% | |
| TTCCATTGTTGTGAAGAATT+GGG | + | chr5_3:60323481-60323500 | None:intergenic | 30.0% | |
| GTTAGGTTAGAATCTACAAT+AGG | - | chr5_3:60323603-60323622 | Msa0821920:CDS | 30.0% | |
| AGAAAGTGAGTCAAACTTAA+GGG | - | chr5_3:60323705-60323724 | Msa0821920:intron | 30.0% | |
| ! | TCAAACTTAAGGGTATGAAA+GGG | - | chr5_3:60323715-60323734 | Msa0821920:intron | 30.0% |
| TCATGTATGAGATTTCATGT+TGG | - | chr5_3:60324023-60324042 | Msa0821920:intron | 30.0% | |
| TTCAACAAAAATCATCCCTT+TGG | + | chr5_3:60324315-60324334 | None:intergenic | 30.0% | |
| ATTGAAATTAGCAATTGCTG+AGG | - | chr5_3:60324381-60324400 | Msa0821920:CDS | 30.0% | |
| AAAGAAGAAGCAAATGCTAA+TGG | - | chr5_3:60324475-60324494 | Msa0821920:intron | 30.0% | |
| AAGAAGAAGCAAATGCTAAT+GGG | - | chr5_3:60324476-60324495 | Msa0821920:intron | 30.0% | |
| !! | CATTTTTCTGAAAATGTCAG+TGG | - | chr5_3:60324673-60324692 | Msa0821920:intron | 30.0% |
| AGAGCTTTACTATATCTAGA+AGG | + | chr5_3:60324784-60324803 | None:intergenic | 30.0% | |
| ATAACTAATAGAATGGGAAC+TGG | + | chr5_3:60325046-60325065 | None:intergenic | 30.0% | |
| ! | TGTTGTTTAGGTTTGAAACT+TGG | - | chr5_3:60325078-60325097 | Msa0821920:CDS | 30.0% |
| ! | GTTTGAAACTTGGAACAATA+TGG | - | chr5_3:60325088-60325107 | Msa0821920:CDS | 30.0% |
| AACAATATGGCTGATCATTT+AGG | - | chr5_3:60325101-60325120 | Msa0821920:CDS | 30.0% | |
| TGAATGCTTAAAGATAGATC+TGG | - | chr5_3:60325190-60325209 | Msa0821920:CDS | 30.0% | |
| GAATGCTTAAAGATAGATCT+GGG | - | chr5_3:60325191-60325210 | Msa0821920:CDS | 30.0% | |
| ATGTTTATGTGCTATGGATT+GGG | - | chr5_3:60325281-60325300 | Msa0821920:intron | 30.0% | |
| ! | AAGTTAATTATCATTGGCCT+TGG | + | chr5_3:60325362-60325381 | None:intergenic | 30.0% |
| ATATACAGTGAGAAAATGAG+AGG | - | chr5_3:60325711-60325730 | Msa0821920:CDS | 30.0% | |
| ! | GAATAAGCTATCCGATTTTA+AGG | + | chr5_3:60325907-60325926 | None:intergenic | 30.0% |
| ATGCTAATACCTTAAAAGCA+CGG | + | chr5_3:60325942-60325961 | None:intergenic | 30.0% | |
| AGCATTAGAATATAGGTTCT+AGG | - | chr5_3:60325957-60325976 | Msa0821920:intron | 30.0% | |
| TCGATCCTAAATATGATACT+GGG | + | chr5_3:60326031-60326050 | None:intergenic | 30.0% | |
| !! | CTTACAAGACAGTTTTGTAA+GGG | + | chr5_3:60326087-60326106 | None:intergenic | 30.0% |
| AACCCAAAAAGGTAGTTTAA+GGG | - | chr5_3:60326203-60326222 | Msa0821920:intron | 30.0% | |
| TAGCATCCATAACAATACAA+AGG | + | chr5_3:60326508-60326527 | None:intergenic | 30.0% | |
| CATGGGAAAACTTAATTACT+AGG | + | chr5_3:60326657-60326676 | None:intergenic | 30.0% | |
| ! | CTAGTAATTAAGTTTTCCCA+TGG | - | chr5_3:60326655-60326674 | Msa0821920:intron | 30.0% |
| ! | AATTAAGTTTTCCCATGGAA+TGG | - | chr5_3:60326660-60326679 | Msa0821920:intron | 30.0% |
| ! | ATTAAGTTTTCCCATGGAAT+GGG | - | chr5_3:60326661-60326680 | Msa0821920:intron | 30.0% |
| AAGCAAAGGTAAGAAGTTAA+AGG | + | chr5_3:60326779-60326798 | None:intergenic | 30.0% | |
| AACTTCTTACCTTTGCTTAA+AGG | - | chr5_3:60326781-60326800 | Msa0821920:intron | 30.0% | |
| ACTTCTTACCTTTGCTTAAA+GGG | - | chr5_3:60326782-60326801 | Msa0821920:intron | 30.0% | |
| ! | TCTTATTTCCCTTTAAGCAA+AGG | + | chr5_3:60326793-60326812 | None:intergenic | 30.0% |
| AAGAAGTGAAAGATGTTTGT+AGG | - | chr5_3:60326809-60326828 | Msa0821920:intron | 30.0% | |
| CTGAAAAGTTTGTCTATGTT+TGG | + | chr5_3:60327145-60327164 | None:intergenic | 30.0% | |
| AGAGTCTTCATACAAATCTA+AGG | + | chr5_3:60327202-60327221 | None:intergenic | 30.0% | |
| CATCACTAAGAATCATAAGA+AGG | - | chr5_3:60327242-60327261 | Msa0821920:intron | 30.0% | |
| ! | ATATTTTGTTGCATGTGTAC+AGG | - | chr5_3:60327637-60327656 | Msa0821920:CDS | 30.0% |
| ! | TAATCACATTCTAGAGATAC+GGG | + | chr5_3:60327770-60327789 | None:intergenic | 30.0% |
| TCAACCATACAATATGAAAC+AGG | - | chr5_3:60327893-60327912 | Msa0821920:CDS | 30.0% | |
| !! | CGATTTTCTGAAAGCATAAT+AGG | + | chr5_3:60328049-60328068 | None:intergenic | 30.0% |
| AAAGTAAGCTAATCCATTCT+TGG | - | chr5_3:60328124-60328143 | Msa0821920:intron | 30.0% | |
| TTCATTAAAGAGGAAAAAGG+TGG | + | chr5_3:60328153-60328172 | None:intergenic | 30.0% | |
| TCCTCTTTAATGAAGATAAG+AGG | - | chr5_3:60328159-60328178 | Msa0821920:intron | 30.0% | |
| TCCTCTTATCTTCATTAAAG+AGG | + | chr5_3:60328163-60328182 | None:intergenic | 30.0% | |
| GACTACAAGTGAATAAAAGT+AGG | - | chr5_3:60328358-60328377 | Msa0821920:intron | 30.0% | |
| AGTAAGAAGATAAAACTGTG+AGG | + | chr5_3:60328550-60328569 | None:intergenic | 30.0% | |
| !! | TACTTAGTTTTTACTGGATG+TGG | - | chr5_3:60328566-60328585 | Msa0821920:intron | 30.0% |
| CACATGCAATTTACTAGTTA+AGG | - | chr5_3:60328745-60328764 | Msa0821920:intron | 30.0% | |
| AAAAATCAAAAGACCTAGTG+GGG | + | chr5_3:60328888-60328907 | None:intergenic | 30.0% | |
| !!! | TATTTTTGGGCATTTGATGT+AGG | - | chr5_3:60328907-60328926 | Msa0821920:five_prime_UTR | 30.0% |
| GTTAGGAACAAAGCAAAACA+AGG | + | chr5_3:60323314-60323333 | None:intergenic | 35.0% | |
| ! | TTGTTCCTAACCCATTTTCA+AGG | - | chr5_3:60323323-60323342 | Msa0821920:three_prime_UTR | 35.0% |
| ! | TGTTCCTAACCCATTTTCAA+GGG | - | chr5_3:60323324-60323343 | Msa0821920:three_prime_UTR | 35.0% |
| !!! | TGAGATTTTGGGGTCAAAAA+AGG | + | chr5_3:60323442-60323461 | None:intergenic | 35.0% |
| !!! | GATCCTGTTTTGAGATTTTG+GGG | + | chr5_3:60323452-60323471 | None:intergenic | 35.0% |
| !!! | CGATCCTGTTTTGAGATTTT+GGG | + | chr5_3:60323453-60323472 | None:intergenic | 35.0% |
| CCAAAATCTCAAAACAGGAT+CGG | - | chr5_3:60323451-60323470 | Msa0821920:three_prime_UTR | 35.0% | |
| TTCCCAATTCTTCACAACAA+TGG | - | chr5_3:60323476-60323495 | Msa0821920:three_prime_UTR | 35.0% | |
| CTTCCATTGTTGTGAAGAAT+TGG | + | chr5_3:60323482-60323501 | None:intergenic | 35.0% | |
| CAATTCTTCACAACAATGGA+AGG | - | chr5_3:60323480-60323499 | Msa0821920:three_prime_UTR | 35.0% | |
| !!! | GATTTGGGTCATTGATTTTG+TGG | - | chr5_3:60323539-60323558 | Msa0821920:three_prime_UTR | 35.0% |
| ATAGGGATTGTTTGCATTAC+TGG | - | chr5_3:60323621-60323640 | Msa0821920:CDS | 35.0% | |
| TAGGGATTGTTTGCATTACT+GGG | - | chr5_3:60323622-60323641 | Msa0821920:CDS | 35.0% | |
| ! | TGACTTAAATTTGGGGTCTT+TGG | - | chr5_3:60323676-60323695 | Msa0821920:intron | 35.0% |
| ! | GACTTAAATTTGGGGTCTTT+GGG | - | chr5_3:60323677-60323696 | Msa0821920:intron | 35.0% |
| GAGAAAGTGAGTCAAACTTA+AGG | - | chr5_3:60323704-60323723 | Msa0821920:intron | 35.0% | |
| ! | GTCAAACTTAAGGGTATGAA+AGG | - | chr5_3:60323714-60323733 | Msa0821920:intron | 35.0% |
| ! | CAAACTTAAGGGTATGAAAG+GGG | - | chr5_3:60323716-60323735 | Msa0821920:intron | 35.0% |
| AAGTAGATCCAAGTGGTTTA+TGG | + | chr5_3:60323838-60323857 | None:intergenic | 35.0% | |
| TCTACTTTCTGTGTGAGATA+AGG | - | chr5_3:60323851-60323870 | Msa0821920:intron | 35.0% | |
| CTACTTTCTGTGTGAGATAA+GGG | - | chr5_3:60323852-60323871 | Msa0821920:intron | 35.0% | |
| GAACTAAACTTCTTGCTTCT+CGG | - | chr5_3:60324139-60324158 | Msa0821920:intron | 35.0% | |
| AGAAGAAAATAAAGTCTCCG+CGG | - | chr5_3:60324192-60324211 | Msa0821920:intron | 35.0% | |
| ! | GGGCTTGGAGAAATTTTATA+CGG | - | chr5_3:60324258-60324277 | Msa0821920:intron | 35.0% |
| ! | GGCTTGGAGAAATTTTATAC+GGG | - | chr5_3:60324259-60324278 | Msa0821920:intron | 35.0% |
| ! | TGGAGAAATTTTATACGGGT+AGG | - | chr5_3:60324263-60324282 | Msa0821920:intron | 35.0% |
| ! | GGAGAAATTTTATACGGGTA+GGG | - | chr5_3:60324264-60324283 | Msa0821920:intron | 35.0% |
| GCTAATTTCAATTCCTCTGT+CGG | + | chr5_3:60324373-60324392 | None:intergenic | 35.0% | |
| TTGACAGAAAAGCAAGTTTC+TGG | - | chr5_3:60324412-60324431 | Msa0821920:intron | 35.0% | |
| TGACAGAAAAGCAAGTTTCT+GGG | - | chr5_3:60324413-60324432 | Msa0821920:intron | 35.0% | |
| ! | TTTTATCCTTTAACCTTCGG+TGG | + | chr5_3:60324447-60324466 | None:intergenic | 35.0% |
| GCATGGTGATTATAAGTATC+TGG | - | chr5_3:60324573-60324592 | Msa0821920:CDS | 35.0% | |
| TAAGTATCTGGATCCTAAAG+AGG | - | chr5_3:60324585-60324604 | Msa0821920:CDS | 35.0% | |
| ! | TTCTGAAAATGTCAGTGGAA+TGG | - | chr5_3:60324678-60324697 | Msa0821920:intron | 35.0% |
| ATTGCACCTTTCGGATTTAA+GGG | + | chr5_3:60324811-60324830 | None:intergenic | 35.0% | |
| CAACATGGGATATAAACCAT+CGG | - | chr5_3:60324831-60324850 | Msa0821920:CDS | 35.0% | |
| AACATGGGATATAAACCATC+GGG | - | chr5_3:60324832-60324851 | Msa0821920:CDS | 35.0% | |
| TTCACTTTCAAATATCCCGA+TGG | + | chr5_3:60324850-60324869 | None:intergenic | 35.0% | |
| ATCGGGATATTTGAAAGTGA+AGG | - | chr5_3:60324849-60324868 | Msa0821920:CDS | 35.0% | |
| TCGGGATATTTGAAAGTGAA+GGG | - | chr5_3:60324850-60324869 | Msa0821920:CDS | 35.0% | |
| ACTGCTGTTAAGAAGCAATT+AGG | - | chr5_3:60324895-60324914 | Msa0821920:CDS | 35.0% | |
| CTGTTAAGAAGCAATTAGGA+AGG | - | chr5_3:60324899-60324918 | Msa0821920:CDS | 35.0% | |
| GCAATTAGGAAGGAATTATC+AGG | - | chr5_3:60324909-60324928 | Msa0821920:CDS | 35.0% | |
| TCAAATTCTACACCAAGTAG+TGG | + | chr5_3:60324943-60324962 | None:intergenic | 35.0% | |
| ATGGGAACTGGAAAGAAAAA+GGG | + | chr5_3:60325034-60325053 | None:intergenic | 35.0% | |
| AATGGGAACTGGAAAGAAAA+AGG | + | chr5_3:60325035-60325054 | None:intergenic | 35.0% | |
| ! | TGGCTGATCATTTAGGATAA+AGG | - | chr5_3:60325108-60325127 | Msa0821920:CDS | 35.0% |
| TAAACATGATGCAGGTTAGA+TGG | + | chr5_3:60325268-60325287 | None:intergenic | 35.0% | |
| ATAGCACATAAACATGATGC+AGG | + | chr5_3:60325276-60325295 | None:intergenic | 35.0% | |
| TGCATCATGTTTATGTGCTA+TGG | - | chr5_3:60325275-60325294 | Msa0821920:intron | 35.0% | |
| CATGTTTATGTGCTATGGAT+TGG | - | chr5_3:60325280-60325299 | Msa0821920:intron | 35.0% | |
| ! | AATGTCTGGCTTACAAGTTA+TGG | + | chr5_3:60325464-60325483 | None:intergenic | 35.0% |
| !!! | GAGCTTTTAGTTTTAGTGTC+AGG | - | chr5_3:60325516-60325535 | Msa0821920:intron | 35.0% |
| ACTATTAGTGTATCGAGGTA+TGG | + | chr5_3:60325749-60325768 | None:intergenic | 35.0% | |
| TCTTGACTATTAGTGTATCG+AGG | + | chr5_3:60325754-60325773 | None:intergenic | 35.0% | |
| ! | AAAAGCACGGCATTATCTTT+AGG | + | chr5_3:60325929-60325948 | None:intergenic | 35.0% |
| ! | AAGATAATGCCGTGCTTTTA+AGG | - | chr5_3:60325930-60325949 | Msa0821920:intron | 35.0% |
| !! | TTAGAATATAGGTTCTAGGC+TGG | - | chr5_3:60325961-60325980 | Msa0821920:intron | 35.0% |
| AGTGTCCCAGTATCATATTT+AGG | - | chr5_3:60326023-60326042 | Msa0821920:intron | 35.0% | |
| GTCGATCCTAAATATGATAC+TGG | + | chr5_3:60326032-60326051 | None:intergenic | 35.0% | |
| !! | GACAGTTTTGTAAGGGTTAA+GGG | + | chr5_3:60326080-60326099 | None:intergenic | 35.0% |
| !! | AGACAGTTTTGTAAGGGTTA+AGG | + | chr5_3:60326081-60326100 | None:intergenic | 35.0% |
| !! | CCTTACAAGACAGTTTTGTA+AGG | + | chr5_3:60326088-60326107 | None:intergenic | 35.0% |
| CCTTACAAAACTGTCTTGTA+AGG | - | chr5_3:60326085-60326104 | Msa0821920:intron | 35.0% | |
| CAAAACTGTCTTGTAAGGTA+AGG | - | chr5_3:60326090-60326109 | Msa0821920:intron | 35.0% | |
| ATGTGGTGCTTATAAAGCTT+AGG | + | chr5_3:60326120-60326139 | None:intergenic | 35.0% | |
| ! | AAGCTTTATAAGCACCACAT+AGG | - | chr5_3:60326120-60326139 | Msa0821920:intron | 35.0% |
| CAACCCAAAAAGGTAGTTTA+AGG | - | chr5_3:60326202-60326221 | Msa0821920:intron | 35.0% | |
| ACCCAAAAAGGTAGTTTAAG+GGG | - | chr5_3:60326204-60326223 | Msa0821920:intron | 35.0% | |
| CGTTTGCTCAAGTCTTTATA+AGG | - | chr5_3:60326230-60326249 | Msa0821920:intron | 35.0% | |
| !!! | AGGTGTTGTTTTGCTTGTTT+AGG | - | chr5_3:60326337-60326356 | Msa0821920:intron | 35.0% |
| CAGTTGCTACATTTATGAAC+AGG | + | chr5_3:60326943-60326962 | None:intergenic | 35.0% | |
| TCCTTCCATATGAGTATCTT+GGG | + | chr5_3:60327055-60327074 | None:intergenic | 35.0% | |
| CAAGATAAGAAAGCTTTCCA+TGG | - | chr5_3:60327117-60327136 | Msa0821920:intron | 35.0% | |
| TTTGTCTATGTTTGGTACCA+TGG | + | chr5_3:60327137-60327156 | None:intergenic | 35.0% | |
| GATTTGTATGAAGACTCTAC+TGG | - | chr5_3:60327204-60327223 | Msa0821920:intron | 35.0% | |
| TTTCTTCATAGCGATCACTA+TGG | + | chr5_3:60327314-60327333 | None:intergenic | 35.0% | |
| ! | GAATTGTGGATTGAGTTTGA+AGG | + | chr5_3:60327492-60327511 | None:intergenic | 35.0% |
| TGTACAGGATGAGTTGTTTA+AGG | - | chr5_3:60327652-60327671 | Msa0821920:CDS | 35.0% | |
| GTACAGGATGAGTTGTTTAA+GGG | - | chr5_3:60327653-60327672 | Msa0821920:CDS | 35.0% | |
| TACAGGATGAGTTGTTTAAG+GGG | - | chr5_3:60327654-60327673 | Msa0821920:CDS | 35.0% | |
| AAAAAGCAATATCGTGATGC+AGG | - | chr5_3:60327689-60327708 | Msa0821920:intron | 35.0% | |
| GATGCTTTCAAATGAGACTA+TGG | - | chr5_3:60327721-60327740 | Msa0821920:CDS | 35.0% | |
| ! | TTTTGCTTTGGTATGTGTCT+AGG | - | chr5_3:60327842-60327861 | Msa0821920:CDS | 35.0% |
| GGAACCTGTTTCATATTGTA+TGG | + | chr5_3:60327900-60327919 | None:intergenic | 35.0% | |
| TAAGCTCCAAAACTTCTAAG+AGG | + | chr5_3:60327993-60328012 | None:intergenic | 35.0% | |
| AAAAAGGTGGTTTCCAAGAA+TGG | + | chr5_3:60328140-60328159 | None:intergenic | 35.0% | |
| !! | TTTACAAAGGTGCTTCTAGT+GGG | + | chr5_3:60328267-60328286 | None:intergenic | 35.0% |
| !!! | TTTTACAAAGGTGCTTCTAG+TGG | + | chr5_3:60328268-60328287 | None:intergenic | 35.0% |
| !! | CTAGAAGCACCTTTGTAAAA+AGG | - | chr5_3:60328268-60328287 | Msa0821920:intron | 35.0% |
| ! | TAGGGCATACCTTTTTACAA+AGG | + | chr5_3:60328280-60328299 | None:intergenic | 35.0% |
| AGAAGATAAAACTGTGAGGT+TGG | + | chr5_3:60328546-60328565 | None:intergenic | 35.0% | |
| GCACAATGTTGTTAGAAACA+GGG | + | chr5_3:60328592-60328611 | None:intergenic | 35.0% | |
| TGCACAATGTTGTTAGAAAC+AGG | + | chr5_3:60328593-60328612 | None:intergenic | 35.0% | |
| ACAAAACAATCAATCCAGTG+AGG | + | chr5_3:60328689-60328708 | None:intergenic | 35.0% | |
| AGTTAAGGCAGTAGTAACAT+TGG | - | chr5_3:60328760-60328779 | Msa0821920:intron | 35.0% | |
| AAAATCAAAAGACCTAGTGG+GGG | + | chr5_3:60328887-60328906 | None:intergenic | 35.0% | |
| GATCCAATTTAGTCCATGTT+TGG | - | chr5_3:60328994-60329013 | Msa0821920:five_prime_UTR | 35.0% | |
| ! | CTTCCAAACATGGACTAAAT+TGG | + | chr5_3:60329000-60329019 | None:intergenic | 35.0% |
| GTATCTAACTCTTCCAAACA+TGG | + | chr5_3:60329010-60329029 | None:intergenic | 35.0% | |
| ! | TTGACCCTTGAAAATGGGTT+AGG | + | chr5_3:60323331-60323350 | None:intergenic | 40.0% |
| TGACCCCAAAATCTCAAAAC+AGG | - | chr5_3:60323446-60323465 | Msa0821920:three_prime_UTR | 40.0% | |
| !!! | CCGATCCTGTTTTGAGATTT+TGG | + | chr5_3:60323454-60323473 | None:intergenic | 40.0% |
| TACTGGGTAGATTGTTGCAA+TGG | - | chr5_3:60323638-60323657 | Msa0821920:CDS | 40.0% | |
| GTCATTGACCATAAACCACT+TGG | - | chr5_3:60323827-60323846 | Msa0821920:intron | 40.0% | |
| ACACAGAAAGTAGATCCAAG+TGG | + | chr5_3:60323845-60323864 | None:intergenic | 40.0% | |
| TAAACTTCTTGCTTCTCGGT+TGG | - | chr5_3:60324143-60324162 | Msa0821920:intron | 40.0% | |
| !!! | GCGGAGACTTTATTTTCTTC+TGG | + | chr5_3:60324193-60324212 | None:intergenic | 40.0% |
| !! | GGCGTTTTGAGCTTTCTTTT+CGG | + | chr5_3:60324226-60324245 | None:intergenic | 40.0% |
| CAGACAAATCACGATTGTAG+AGG | + | chr5_3:60324624-60324643 | None:intergenic | 40.0% | |
| CAAGAACGTATGTATCCTCA+AGG | - | chr5_3:60324736-60324755 | Msa0821920:CDS | 40.0% | |
| GATTGCACCTTTCGGATTTA+AGG | + | chr5_3:60324812-60324831 | None:intergenic | 40.0% | |
| GGAAGGAATTATCAGGAAGA+TGG | - | chr5_3:60324916-60324935 | Msa0821920:CDS | 40.0% | |
| AATTTGATCCACTTCCTCCA+GGG | - | chr5_3:60324956-60324975 | Msa0821920:intron | 40.0% | |
| TGGGAACTGGAAAGAAAAAG+GGG | + | chr5_3:60325033-60325052 | None:intergenic | 40.0% | |
| !! | AGATAGATCTGGGTTTGCTA+TGG | - | chr5_3:60325201-60325220 | Msa0821920:CDS | 40.0% |
| !! | GATAGATCTGGGTTTGCTAT+GGG | - | chr5_3:60325202-60325221 | Msa0821920:CDS | 40.0% |
| ! | TTCTAGAAATAACCTACCCC+AGG | + | chr5_3:60325228-60325247 | None:intergenic | 40.0% |
| !! | GGGGTAGGTTATTTCTAGAA+TGG | - | chr5_3:60325228-60325247 | Msa0821920:CDS | 40.0% |
| !! | GTCCATATTTTGAGGGTTTG+TGG | - | chr5_3:60325868-60325887 | Msa0821920:intron | 40.0% |
| AGCCACAAACCCTCAAAATA+TGG | + | chr5_3:60325873-60325892 | None:intergenic | 40.0% | |
| ! | GCCCCTTAAACTACCTTTTT+GGG | + | chr5_3:60326208-60326227 | None:intergenic | 40.0% |
| GGGTCTTAACTTAAGGTTCA+TGG | - | chr5_3:60326283-60326302 | Msa0821920:intron | 40.0% | |
| TAACTTAAGGTTCATGGCAC+TGG | - | chr5_3:60326289-60326308 | Msa0821920:intron | 40.0% | |
| AACTTAAGGTTCATGGCACT+GGG | - | chr5_3:60326290-60326309 | Msa0821920:intron | 40.0% | |
| TTCATTGTAGCTAAGGTGCA+AGG | - | chr5_3:60326405-60326424 | Msa0821920:intron | 40.0% | |
| TCAGCAATATGGTATGGTTC+TGG | + | chr5_3:60326533-60326552 | None:intergenic | 40.0% | |
| ! | CTTTTCACTGTGGAGATTTC+TGG | + | chr5_3:60326575-60326594 | None:intergenic | 40.0% |
| CGATATCAATCCCATTCCAT+GGG | + | chr5_3:60326674-60326693 | None:intergenic | 40.0% | |
| ACGATATCAATCCCATTCCA+TGG | + | chr5_3:60326675-60326694 | None:intergenic | 40.0% | |
| TGAAAGAGAGTGAGAAAGCA+GGG | + | chr5_3:60326986-60327005 | None:intergenic | 40.0% | |
| TGGTTCCCAAGATACTCATA+TGG | - | chr5_3:60327047-60327066 | Msa0821920:intron | 40.0% | |
| TCCCAAGATACTCATATGGA+AGG | - | chr5_3:60327051-60327070 | Msa0821920:intron | 40.0% | |
| CTCCTTCCATATGAGTATCT+TGG | + | chr5_3:60327056-60327075 | None:intergenic | 40.0% | |
| ! | CATATGGAAGGAGTTGACTT+TGG | - | chr5_3:60327063-60327082 | Msa0821920:intron | 40.0% |
| GTTGCATGATGTTCATGTTC+AGG | - | chr5_3:60327089-60327108 | Msa0821920:intron | 40.0% | |
| CCTTTGCACATTCTTTGGAT+TGG | + | chr5_3:60327385-60327404 | None:intergenic | 40.0% | |
| CCAATCCAAAGAATGTGCAA+AGG | - | chr5_3:60327382-60327401 | Msa0821920:CDS | 40.0% | |
| ACACTCCTTTGCACATTCTT+TGG | + | chr5_3:60327390-60327409 | None:intergenic | 40.0% | |
| ! | TCAATCCAAAGAAAGCGCAA+AGG | - | chr5_3:60327445-60327464 | Msa0821920:CDS | 40.0% |
| AACTCAATCCACAATTCTCG+AGG | - | chr5_3:60327495-60327514 | Msa0821920:intron | 40.0% | |
| TCTGTGGATACTGAAGAAAG+AGG | - | chr5_3:60327519-60327538 | Msa0821920:CDS | 40.0% | |
| CTGTGGATACTGAAGAAAGA+GGG | - | chr5_3:60327520-60327539 | Msa0821920:CDS | 40.0% | |
| AAGAAAGAGGGCTATCTTCT+AGG | - | chr5_3:60327532-60327551 | Msa0821920:CDS | 40.0% | |
| !! | GCTATCTTCTAGGATGACTA+AGG | - | chr5_3:60327542-60327561 | Msa0821920:CDS | 40.0% |
| ACAGGATGAGTTGTTTAAGG+GGG | - | chr5_3:60327655-60327674 | Msa0821920:CDS | 40.0% | |
| ! | CAAAACTTCTAAGAGGACGT+GGG | + | chr5_3:60327986-60328005 | None:intergenic | 40.0% |
| ! | TAAAAAGGTATGCCCTAGCA+GGG | - | chr5_3:60328283-60328302 | Msa0821920:intron | 40.0% |
| GACTAAACTAAACCCTGCTA+GGG | + | chr5_3:60328298-60328317 | None:intergenic | 40.0% | |
| AAAATCACAAGGTGTGGGAT+GGG | + | chr5_3:60328320-60328339 | None:intergenic | 40.0% | |
| AAGGCAAAATCACAAGGTGT+GGG | + | chr5_3:60328325-60328344 | None:intergenic | 40.0% | |
| GGTTTGAAGGCAAAATCACA+AGG | + | chr5_3:60328331-60328350 | None:intergenic | 40.0% | |
| ! | GTGATTTTGCCTTCAAACCT+CGG | - | chr5_3:60328332-60328351 | Msa0821920:intron | 40.0% |
| ATTCACTTGTAGTCAAACCG+AGG | + | chr5_3:60328352-60328371 | None:intergenic | 40.0% | |
| !!! | CTGTTTTTTCCAGCTAACCA+AGG | + | chr5_3:60328450-60328469 | None:intergenic | 40.0% |
| !! | TGTGAGGTTGGTGTGTATTT+GGG | + | chr5_3:60328534-60328553 | None:intergenic | 40.0% |
| AAATCAAAAGACCTAGTGGG+GGG | + | chr5_3:60328886-60328905 | None:intergenic | 40.0% | |
| CAAGGAGCTTGTGATGAAGT+TGG | + | chr5_3:60323296-60323315 | None:intergenic | 45.0% | |
| TGGGTAGATTGTTGCAATGG+TGG | - | chr5_3:60323641-60323660 | Msa0821920:CDS | 45.0% | |
| GTGTGAGATAAGGGTTTGCA+CGG | - | chr5_3:60323861-60323880 | Msa0821920:intron | 45.0% | |
| ! | TCTTTTCGGAAACTTCTCCG+CGG | + | chr5_3:60324212-60324231 | None:intergenic | 45.0% |
| AAAACGCCTGCACAGCTTAA+GGG | - | chr5_3:60324238-60324257 | Msa0821920:intron | 45.0% | |
| TCTGTCGGATATTTGTGCTC+TGG | + | chr5_3:60324358-60324377 | None:intergenic | 45.0% | |
| AGAGCACAAATATCCGACAG+AGG | - | chr5_3:60324357-60324376 | Msa0821920:CDS | 45.0% | |
| ! | CAGAAAAGCAAGTTTCTGGG+TGG | - | chr5_3:60324416-60324435 | Msa0821920:intron | 45.0% |
| ! | GTTTTGCCACCGAAGGTTAA+AGG | - | chr5_3:60324438-60324457 | Msa0821920:intron | 45.0% |
| CCTAAAGAGGTTGAGAGCAA+CGG | - | chr5_3:60324598-60324617 | Msa0821920:CDS | 45.0% | |
| TCTGTTGCAGATGTGACGTA+TGG | - | chr5_3:60324640-60324659 | Msa0821920:intron | 45.0% | |
| !! | TCATATGGATCTTGGCCTTG+AGG | + | chr5_3:60324754-60324773 | None:intergenic | 45.0% |
| AGGCCAAGATCCATATGAGA+TGG | - | chr5_3:60324756-60324775 | Msa0821920:CDS | 45.0% | |
| GCTCCATCTCATATGGATCT+TGG | + | chr5_3:60324762-60324781 | None:intergenic | 45.0% | |
| CTAGAAGGCTCCATCTCATA+TGG | + | chr5_3:60324769-60324788 | None:intergenic | 45.0% | |
| CTTCCACCCTTAAATCCGAA+AGG | - | chr5_3:60324802-60324821 | Msa0821920:CDS | 45.0% | |
| ! | TCCGAAAGGTGCAATCAACA+TGG | - | chr5_3:60324816-60324835 | Msa0821920:CDS | 45.0% |
| ! | CCCATGTTGATTGCACCTTT+CGG | + | chr5_3:60324820-60324839 | None:intergenic | 45.0% |
| ! | CCGAAAGGTGCAATCAACAT+GGG | - | chr5_3:60324817-60324836 | Msa0821920:CDS | 45.0% |
| GAATTTGATCCACTTCCTCC+AGG | - | chr5_3:60324955-60324974 | Msa0821920:intron | 45.0% | |
| ATTTGATCCACTTCCTCCAG+GGG | - | chr5_3:60324957-60324976 | Msa0821920:intron | 45.0% | |
| CATGAACTGCGTCTTCAGTT+TGG | + | chr5_3:60324993-60325012 | None:intergenic | 45.0% | |
| CAAACTGAAGACGCAGTTCA+TGG | - | chr5_3:60324991-60325010 | Msa0821920:intron | 45.0% | |
| GGAACTGGAAAGAAAAAGGG+GGG | + | chr5_3:60325031-60325050 | None:intergenic | 45.0% | |
| GGGAACTGGAAAGAAAAAGG+GGG | + | chr5_3:60325032-60325051 | None:intergenic | 45.0% | |
| GAGCGTGAAGTTTGTAGTAG+TGG | - | chr5_3:60325991-60326010 | Msa0821920:intron | 45.0% | |
| GACTAGAGTTACGACCTATG+TGG | + | chr5_3:60326137-60326156 | None:intergenic | 45.0% | |
| TAGGTCGTAACTCTAGTCGA+TGG | - | chr5_3:60326139-60326158 | Msa0821920:intron | 45.0% | |
| AGGTCGTAACTCTAGTCGAT+GGG | - | chr5_3:60326140-60326159 | Msa0821920:intron | 45.0% | |
| ! | CGCCCCTTAAACTACCTTTT+TGG | + | chr5_3:60326209-60326228 | None:intergenic | 45.0% |
| CGATGCAGGGTCTTAACTTA+AGG | - | chr5_3:60326276-60326295 | Msa0821920:intron | 45.0% | |
| GCAGGATCAGCAATATGGTA+TGG | + | chr5_3:60326539-60326558 | None:intergenic | 45.0% | |
| GAAGAGCAGGATCAGCAATA+TGG | + | chr5_3:60326544-60326563 | None:intergenic | 45.0% | |
| TCTGGAGAATTCAGAAGAGC+AGG | + | chr5_3:60326557-60326576 | None:intergenic | 45.0% | |
| CTACTTACAGAGCTAAGACC+AGG | + | chr5_3:60326602-60326621 | None:intergenic | 45.0% | |
| AAAGAGAGTGAGAAAGCAGG+GGG | + | chr5_3:60326984-60327003 | None:intergenic | 45.0% | |
| GAAAGAGAGTGAGAAAGCAG+GGG | + | chr5_3:60326985-60327004 | None:intergenic | 45.0% | |
| GTGAAAGAGAGTGAGAAAGC+AGG | + | chr5_3:60326987-60327006 | None:intergenic | 45.0% | |
| !! | AGTAATGCCAGTCGTTTTCC+TGG | - | chr5_3:60327165-60327184 | Msa0821920:intron | 45.0% |
| GGAAGTCTGCATGTTTGACT+GGG | + | chr5_3:60327341-60327360 | None:intergenic | 45.0% | |
| AGGAAGTCTGCATGTTTGAC+TGG | + | chr5_3:60327342-60327361 | None:intergenic | 45.0% | |
| TCACTCCTTTGCGCTTTCTT+TGG | + | chr5_3:60327453-60327472 | None:intergenic | 45.0% | |
| ATGAGTTGTTTAAGGGGGAC+AGG | - | chr5_3:60327660-60327679 | Msa0821920:CDS | 45.0% | |
| AAGCAATATCGTGATGCAGG+TGG | - | chr5_3:60327692-60327711 | Msa0821920:intron | 45.0% | |
| !!! | GCACACATGCTGTTTTGCTT+TGG | - | chr5_3:60327830-60327849 | Msa0821920:CDS | 45.0% |
| !! | CTTGGTTCTATCTCAGCAAC+AGG | + | chr5_3:60327921-60327940 | None:intergenic | 45.0% |
| CTGTTGCTGAGATAGAACCA+AGG | - | chr5_3:60327919-60327938 | Msa0821920:intron | 45.0% | |
| TAGAACCAAGGAAAGCTCAG+AGG | - | chr5_3:60327931-60327950 | Msa0821920:intron | 45.0% | |
| ! | CCAAAACTTCTAAGAGGACG+TGG | + | chr5_3:60327987-60328006 | None:intergenic | 45.0% |
| ! | CCACGTCCTCTTAGAAGTTT+TGG | - | chr5_3:60327984-60328003 | Msa0821920:intron | 45.0% |
| ! | AAGGTGCTTCTAGTGGGATT+CGG | + | chr5_3:60328261-60328280 | None:intergenic | 45.0% |
| ! | GTAAAAAGGTATGCCCTAGC+AGG | - | chr5_3:60328282-60328301 | Msa0821920:intron | 45.0% |
| GGACTAAACTAAACCCTGCT+AGG | + | chr5_3:60328299-60328318 | None:intergenic | 45.0% | |
| CAAAATCACAAGGTGTGGGA+TGG | + | chr5_3:60328321-60328340 | None:intergenic | 45.0% | |
| GAAGGCAAAATCACAAGGTG+TGG | + | chr5_3:60328326-60328345 | None:intergenic | 45.0% | |
| GTAGTCAAACCGAGGTTTGA+AGG | + | chr5_3:60328344-60328363 | None:intergenic | 45.0% | |
| !! | CTGTGAGGTTGGTGTGTATT+TGG | + | chr5_3:60328535-60328554 | None:intergenic | 45.0% |
| TCATCCTCGCTAAAGCTAGA+CGG | + | chr5_3:60328649-60328668 | None:intergenic | 45.0% | |
| CAATCAATCCAGTGAGGAAC+TGG | + | chr5_3:60328683-60328702 | None:intergenic | 45.0% | |
| !! | AATTTATTAATATTTGTATT+TGG | - | chr5_3:60325605-60325624 | Msa0821920:intron | 5.0% |
| GAGATAAGGGTTTGCACGGA+AGG | - | chr5_3:60323865-60323884 | Msa0821920:intron | 50.0% | |
| CAAAACGCCTGCACAGCTTA+AGG | - | chr5_3:60324237-60324256 | Msa0821920:intron | 50.0% | |
| !! | TCGTTCAAGTGGTGTCATCC+AGG | - | chr5_3:60324507-60324526 | Msa0821920:intron | 50.0% |
| CCGTTGCTCTCAACCTCTTT+AGG | + | chr5_3:60324601-60324620 | None:intergenic | 50.0% | |
| GCACCTTTCGGATTTAAGGG+TGG | + | chr5_3:60324808-60324827 | None:intergenic | 50.0% | |
| CAGGAAGATGGTCCACTACT+TGG | - | chr5_3:60324928-60324947 | Msa0821920:CDS | 50.0% | |
| GTTTGGCATTCAAATGCCCC+TGG | + | chr5_3:60324976-60324995 | None:intergenic | 50.0% | |
| CTGAAGACGCAGTTCATGGT+AGG | - | chr5_3:60324995-60325014 | Msa0821920:intron | 50.0% | |
| CTACAAACTTCACGCTCCAG+AGG | + | chr5_3:60325988-60326007 | None:intergenic | 50.0% | |
| GGGCTCAACTCAACCCAAAA+AGG | - | chr5_3:60326192-60326211 | Msa0821920:intron | 50.0% | |
| GTTAAGACCCTGCATCGAGT+GGG | + | chr5_3:60326273-60326292 | None:intergenic | 50.0% | |
| AGTTAAGACCCTGCATCGAG+TGG | + | chr5_3:60326274-60326293 | None:intergenic | 50.0% | |
| TCCACAGTGAAAAGTCGACC+TGG | - | chr5_3:60326581-60326600 | Msa0821920:intron | 50.0% | |
| !! | ACCAGGTCGACTTTTCACTG+TGG | + | chr5_3:60326585-60326604 | None:intergenic | 50.0% |
| TCTAAGGAAGAGTTCCTGCC+AGG | + | chr5_3:60327186-60327205 | None:intergenic | 50.0% | |
| CATAAGAAGGATGCCAAGCG+CGG | - | chr5_3:60327255-60327274 | Msa0821920:intron | 50.0% | |
| AGTCTGCATGTTTGACTGGG+AGG | + | chr5_3:60327338-60327357 | None:intergenic | 50.0% | |
| CCACAGAACCTCGAGAATTG+TGG | + | chr5_3:60327506-60327525 | None:intergenic | 50.0% | |
| CCACAATTCTCGAGGTTCTG+TGG | - | chr5_3:60327503-60327522 | Msa0821920:CDS | 50.0% | |
| AAACAGCATGTGTGCGTGCA+TGG | + | chr5_3:60327825-60327844 | None:intergenic | 50.0% | |
| ! | TTCTAAGAGGACGTGGGTGT+CGG | + | chr5_3:60327980-60327999 | None:intergenic | 50.0% |
| TATGTCTGCAGTCGTACGCA+AGG | - | chr5_3:60328420-60328439 | Msa0821920:intron | 50.0% | |
| ATGTCTGCAGTCGTACGCAA+GGG | - | chr5_3:60328421-60328440 | Msa0821920:intron | 50.0% | |
| TGCTGATACCAGTTCCTCAC+TGG | - | chr5_3:60328672-60328691 | Msa0821920:intron | 50.0% | |
| TCCAAGCCCTTAAGCTGTGC+AGG | + | chr5_3:60324247-60324266 | None:intergenic | 55.0% | |
| GGGCGACAAGATCGTTCAAG+TGG | - | chr5_3:60324496-60324515 | Msa0821920:intron | 55.0% | |
| !! | AGTGGTGTCATCCAGGATCG+TGG | - | chr5_3:60324514-60324533 | Msa0821920:intron | 55.0% |
| ! | AGGATCGTGGCAGTGGACTT+GGG | - | chr5_3:60324527-60324546 | Msa0821920:intron | 55.0% |
| GGACTTGGGCAAGATTCGTG+CGG | - | chr5_3:60324541-60324560 | Msa0821920:intron | 55.0% | |
| TCGTGCGGAAGCAGTAAGCA+TGG | - | chr5_3:60324556-60324575 | Msa0821920:CDS | 55.0% | |
| CAGATGTGACGTATGGACGC+AGG | - | chr5_3:60324647-60324666 | Msa0821920:intron | 55.0% | |
| TCAAATGCCCCTGGAGGAAG+TGG | + | chr5_3:60324967-60324986 | None:intergenic | 55.0% | |
| TGGCATTCAAATGCCCCTGG+AGG | + | chr5_3:60324973-60324992 | None:intergenic | 55.0% | |
| !! | ATCTGGGTTTGCTATGGGCC+TGG | - | chr5_3:60325207-60325226 | Msa0821920:CDS | 55.0% |
| !! | TCTGGGTTTGCTATGGGCCT+GGG | - | chr5_3:60325208-60325227 | Msa0821920:CDS | 55.0% |
| !! | TAGGTTCTAGGCTGGACCTC+TGG | - | chr5_3:60325969-60325988 | Msa0821920:intron | 55.0% |
| TCCATATGCCCACTCGATGC+AGG | - | chr5_3:60326262-60326281 | Msa0821920:intron | 55.0% | |
| CCATATGCCCACTCGATGCA+GGG | - | chr5_3:60326263-60326282 | Msa0821920:intron | 55.0% | |
| !! | ATGCCAGTCGTTTTCCTGGC+AGG | - | chr5_3:60327169-60327188 | Msa0821920:intron | 55.0% |
| GTTCCTGCCAGGAAAACGAC+TGG | + | chr5_3:60327175-60327194 | None:intergenic | 55.0% | |
| TATCGTGATGCAGGTGGAGC+AGG | - | chr5_3:60327698-60327717 | Msa0821920:intron | 55.0% | |
| ATCGTGATGCAGGTGGAGCA+GGG | - | chr5_3:60327699-60327718 | Msa0821920:intron | 55.0% | |
| ATGTGTGCGTGCATGGAAGG+AGG | + | chr5_3:60327818-60327837 | None:intergenic | 55.0% | |
| AGCATGTGTGCGTGCATGGA+AGG | + | chr5_3:60327821-60327840 | None:intergenic | 55.0% | |
| GCTCACCTCTGAGCTTTCCT+TGG | + | chr5_3:60327939-60327958 | None:intergenic | 55.0% | |
| TCTAAGAGGACGTGGGTGTC+GGG | + | chr5_3:60327979-60327998 | None:intergenic | 55.0% | |
| CAAGGGACACCTTGGTTAGC+TGG | - | chr5_3:60328438-60328457 | Msa0821920:intron | 55.0% | |
| !! | GATGCCGTCTAGCTTTAGCG+AGG | - | chr5_3:60328642-60328661 | Msa0821920:intron | 55.0% |
| TAGAACTCCTACCCCCCACT+AGG | - | chr5_3:60328872-60328891 | Msa0821920:five_prime_UTR | 55.0% | |
| CAAAAGACCTAGTGGGGGGT+AGG | + | chr5_3:60328882-60328901 | None:intergenic | 55.0% | |
| GCCTGCACAGCTTAAGGGCT+TGG | - | chr5_3:60324243-60324262 | Msa0821920:intron | 60.0% | |
| !! | CTGGGTGGTTTTGCCACCGA+AGG | - | chr5_3:60324431-60324450 | Msa0821920:intron | 60.0% |
| GTCATCCAGGATCGTGGCAG+TGG | - | chr5_3:60324520-60324539 | Msa0821920:intron | 60.0% | |
| CAAGTCCACTGCCACGATCC+TGG | + | chr5_3:60324528-60324547 | None:intergenic | 60.0% | |
| ! | CAGGATCGTGGCAGTGGACT+TGG | - | chr5_3:60324526-60324545 | Msa0821920:intron | 60.0% |
| !! | CTGGGTTTGCTATGGGCCTG+GGG | - | chr5_3:60325209-60325228 | Msa0821920:CDS | 60.0% |
| !! | GTTTGCTATGGGCCTGGGGT+AGG | - | chr5_3:60325213-60325232 | Msa0821920:CDS | 60.0% |
| CCCTGCATCGAGTGGGCATA+TGG | + | chr5_3:60326266-60326285 | None:intergenic | 60.0% | |
| ! | GATGCCAAGCGCGGTGTTGA+GGG | - | chr5_3:60327264-60327283 | Msa0821920:intron | 60.0% |
| CATACCCTCAACACCGCGCT+TGG | + | chr5_3:60327271-60327290 | None:intergenic | 60.0% | |
| GTCGTACGCAAGGGACACCT+TGG | - | chr5_3:60328430-60328449 | Msa0821920:intron | 60.0% | |
| ! | GGATGCCAAGCGCGGTGTTG+AGG | - | chr5_3:60327263-60327282 | Msa0821920:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 60323210 | 60329082 | 60323210 | ID=Msa0821920;Name=Msa0821920 |
| chr5_3 | mRNA | 60323210 | 60329082 | 60323210 | ID=Msa0821920-mRNA-1;Parent=Msa0821920;Name=Msa0821920-mRNA-1;_AED=0.11;_eAED=0.11;_QI=285|0.63|0.5|1|0.54|0.33|12|383|508 |
| chr5_3 | exon | 60323210 | 60323662 | 60323210 | ID=Msa0821920-mRNA-1:exon:18445;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60324340 | 60324428 | 60324340 | ID=Msa0821920-mRNA-1:exon:18444;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60324550 | 60324633 | 60324550 | ID=Msa0821920-mRNA-1:exon:18443;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60324729 | 60324961 | 60324729 | ID=Msa0821920-mRNA-1:exon:18442;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60325007 | 60325181 | 60325007 | ID=Msa0821920-mRNA-1:exon:18441;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60325188 | 60325271 | 60325188 | ID=Msa0821920-mRNA-1:exon:18440;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60325679 | 60325758 | 60325679 | ID=Msa0821920-mRNA-1:exon:18439;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60327280 | 60327468 | 60327280 | ID=Msa0821920-mRNA-1:exon:18438;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60327499 | 60327687 | 60327499 | ID=Msa0821920-mRNA-1:exon:18437;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60327715 | 60327933 | 60327715 | ID=Msa0821920-mRNA-1:exon:18436;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60328012 | 60328119 | 60328012 | ID=Msa0821920-mRNA-1:exon:18435;Parent=Msa0821920-mRNA-1 |
| chr5_3 | exon | 60328791 | 60329082 | 60328791 | ID=Msa0821920-mRNA-1:exon:18434;Parent=Msa0821920-mRNA-1 |
| chr5_3 | five_prime_UTR | 60328798 | 60329082 | 60328798 | ID=Msa0821920-mRNA-1:five_prime_utr;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60328791 | 60328797 | 60328791 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60328012 | 60328119 | 60328012 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60327715 | 60327933 | 60327715 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60327499 | 60327687 | 60327499 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60327280 | 60327468 | 60327280 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60325679 | 60325758 | 60325679 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60325188 | 60325271 | 60325188 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60325007 | 60325181 | 60325007 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60324729 | 60324961 | 60324729 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60324550 | 60324633 | 60324550 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60324340 | 60324428 | 60324340 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | CDS | 60323593 | 60323662 | 60323593 | ID=Msa0821920-mRNA-1:cds;Parent=Msa0821920-mRNA-1 |
| chr5_3 | three_prime_UTR | 60323210 | 60323592 | 60323210 | ID=Msa0821920-mRNA-1:three_prime_utr;Parent=Msa0821920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
