AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0782920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782920 MtrunA17_Chr5g0447901 91.304 322 24 3 1 320 1 320 0.0 598
Msa0782920 MtrunA17_Chr2g0307811 62.879 396 141 2 4 394 2 396 0.0 511
Msa0782920 MtrunA17_Chr2g0307831 61.893 391 143 2 4 389 2 391 7.01e-179 504
Msa0782920 MtrunA17_Chr2g0307821 61.893 391 143 2 4 389 2 391 7.01e-179 504
Msa0782920 MtrunA17_Chr8g0348981 40.771 363 206 5 10 364 7 368 7.61e-86 266
Msa0782920 MtrunA17_Chr7g0230891 36.968 376 231 4 5 378 15 386 2.16e-83 260
Msa0782920 MtrunA17_Chr1g0195221 41.067 375 195 11 26 384 34 398 1.89e-82 258
Msa0782920 MtrunA17_Chr4g0067631 39.782 367 210 7 26 384 51 414 2.45e-80 253
Msa0782920 MtrunA17_Chr2g0303941 38.211 369 217 7 12 377 16 376 3.56e-78 246
Msa0782920 MtrunA17_Chr4g0043431 39.053 338 202 4 39 375 49 383 5.38e-77 243
Msa0782920 MtrunA17_Chr2g0295451 40.924 303 168 7 26 320 52 351 6.32e-72 230
Msa0782920 MtrunA17_Chr1g0173451 34.761 397 240 11 2 389 49 435 1.95e-70 228
Msa0782920 MtrunA17_Chr2g0330221 54.450 191 87 0 5 195 3 193 2.07e-70 220
Msa0782920 MtrunA17_Chr2g0332801 34.037 379 238 8 25 395 60 434 2.24e-69 225
Msa0782920 MtrunA17_Chr3g0121881 37.637 364 206 11 27 379 33 386 2.05e-67 219
Msa0782920 MtrunA17_Chr5g0425811 38.889 270 158 3 43 311 3 266 3.11e-67 214
Msa0782920 MtrunA17_Chr2g0291841 37.690 329 200 5 58 384 29 354 1.64e-66 215
Msa0782920 MtrunA17_Chr6g0449961 38.395 349 199 11 22 364 40 378 2.13e-66 217
Msa0782920 MtrunA17_Chr4g0043661 36.341 399 219 13 11 388 6 390 3.51e-66 215
Msa0782920 MtrunA17_Chr4g0020771 35.467 375 227 10 26 390 73 442 1.86e-65 215
Msa0782920 MtrunA17_Chr5g0413141 37.360 356 201 10 23 364 55 402 3.42e-64 212
Msa0782920 MtrunA17_Chr7g0270361 35.411 353 211 9 26 364 66 415 5.06e-64 211
Msa0782920 MtrunA17_Chr4g0052621 35.694 353 209 8 26 364 64 412 6.11e-64 211
Msa0782920 MtrunA17_Chr6g0461181 34.146 410 212 12 25 387 31 429 7.17e-64 211
Msa0782920 MtrunA17_Chr8g0365901 33.598 378 237 8 26 393 64 437 2.76e-62 207
Msa0782920 MtrunA17_Chr1g0194231 35.311 354 211 9 26 364 80 430 8.73e-62 206
Msa0782920 MtrunA17_Chr3g0121891 36.288 361 209 9 27 376 29 379 5.49e-61 202
Msa0782920 MtrunA17_Chr3g0093011 43.805 226 124 2 141 364 7 231 6.14e-60 195
Msa0782920 MtrunA17_Chr5g0418411 34.853 373 221 10 27 387 29 391 2.52e-59 197
Msa0782920 MtrunA17_Chr8g0337581 37.037 351 198 10 43 387 51 384 7.33e-59 196
Msa0782920 MtrunA17_Chr2g0332971 34.341 364 226 8 9 362 10 370 7.70e-59 196
Msa0782920 MtrunA17_Chr3g0089021 36.827 353 212 8 43 389 89 436 1.49e-58 197
Msa0782920 MtrunA17_Chr1g0150301 35.795 352 211 9 34 379 36 378 5.74e-58 194
Msa0782920 MtrunA17_Chr2g0293681 37.538 325 184 8 26 336 66 385 4.23e-57 192
Msa0782920 MtrunA17_Chr8g0337571 34.324 370 219 10 26 387 30 383 5.34e-57 191
Msa0782920 MtrunA17_Chr7g0257701 37.234 282 163 8 36 311 107 380 1.60e-56 190
Msa0782920 MtrunA17_Chr7g0228411 33.249 397 228 13 23 388 36 426 4.90e-56 190
Msa0782920 MtrunA17_Chr1g0150291 34.349 361 220 9 27 379 45 396 3.24e-55 187
Msa0782920 MtrunA17_Chr4g0018151 34.465 383 224 14 26 395 77 445 2.75e-54 186
Msa0782920 MtrunA17_Chr7g0257721 37.838 259 155 4 26 279 75 332 1.34e-53 181
Msa0782920 MtrunA17_Chr5g0413411 32.796 372 211 9 26 364 120 485 2.55e-52 182
Msa0782920 MtrunA17_Chr8g0365891 34.048 373 204 11 27 364 107 472 4.07e-51 179
Msa0782920 MtrunA17_Chr3g0100091 36.129 310 174 6 86 387 48 341 3.73e-50 172
Msa0782920 MtrunA17_Chr8g0336481 37.868 272 150 7 84 351 14 270 1.40e-45 158
Msa0782920 MtrunA17_Chr8g0337351 46.711 152 80 1 161 312 4 154 3.79e-41 143
Msa0782920 MtrunA17_Chr8g0337601 38.889 234 129 5 158 387 12 235 1.33e-39 141
Msa0782920 MtrunA17_Chr8g0337521 34.752 282 163 8 7 281 10 277 6.86e-39 141
Msa0782920 MtrunA17_Chr8g0337511 39.487 195 112 3 158 352 15 203 3.53e-37 135
Msa0782920 MtrunA17_Chr1g0149241 27.717 368 219 10 19 379 21 348 1.89e-31 122
Msa0782920 MtrunA17_Chr8g0337551 44.776 134 70 1 152 281 5 138 3.38e-29 110
Msa0782920 MtrunA17_Chr7g0273191 36.567 134 83 1 130 261 5 138 1.92e-24 98.2
Msa0782920 MtrunA17_Chr3g0093021 34.395 157 95 4 10 161 7 160 5.47e-22 92.0
Msa0782920 MtrunA17_Chr7g0257711 34.821 112 70 3 283 391 4 115 9.05e-14 67.4
Msa0782920 MtrunA17_Chr8g0337541 31.148 122 77 5 26 141 30 150 1.37e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782920 AT3G07820.1 49.123 399 190 7 1 394 1 391 1.03e-133 389
Msa0782920 AT3G07840.1 48.232 396 185 5 5 388 7 394 4.93e-132 385
Msa0782920 AT5G48140.1 48.930 374 182 4 14 384 12 379 3.89e-127 372
Msa0782920 AT3G07830.1 46.373 386 199 4 1 384 1 380 1.00e-124 366
Msa0782920 AT3G14040.1 45.983 361 191 3 27 384 71 430 1.49e-110 332
Msa0782920 AT3G07850.1 48.338 331 167 3 57 384 100 429 8.20e-110 330
Msa0782920 AT4G18180.1 45.845 349 184 3 26 369 38 386 1.80e-106 320
Msa0782920 AT1G17150.1 43.333 390 211 5 11 391 14 402 1.56e-104 315
Msa0782920 AT2G33160.1 42.973 370 203 5 22 384 27 395 6.46e-100 311
Msa0782920 AT1G78400.1 42.432 370 206 4 26 389 34 402 3.20e-97 296
Msa0782920 AT4G13760.1 41.129 372 210 5 5 368 6 376 7.44e-96 292
Msa0782920 AT1G43080.1 40.682 381 214 6 10 379 11 390 9.14e-96 292
Msa0782920 AT1G43090.1 40.674 386 217 6 10 384 11 395 2.50e-95 292
Msa0782920 AT1G43100.1 40.000 390 222 6 6 384 7 395 1.66e-93 288
Msa0782920 AT2G15460.1 39.005 382 224 5 11 384 15 395 4.35e-93 285
Msa0782920 AT2G26620.1 41.061 358 207 3 14 368 18 374 1.13e-92 284
Msa0782920 AT2G15450.1 38.560 389 228 6 11 389 15 402 2.42e-92 283
Msa0782920 AT2G40310.1 39.633 381 221 5 12 384 16 395 1.02e-91 282
Msa0782920 AT2G15470.1 38.220 382 227 5 11 384 15 395 1.70e-90 279
Msa0782920 AT1G05660.1 39.370 381 219 6 5 377 1 377 1.08e-89 276
Msa0782920 AT2G43890.1 38.421 380 224 5 11 384 9 384 1.13e-89 276
Msa0782920 AT1G05650.1 39.247 372 218 6 10 377 10 377 5.29e-89 275
Msa0782920 AT1G02790.1 40.209 383 205 6 22 389 47 420 1.50e-86 269
Msa0782920 AT2G43870.1 39.005 382 224 7 7 384 1 377 6.99e-85 263
Msa0782920 AT2G43880.1 39.722 360 211 4 27 384 31 386 2.72e-81 254
Msa0782920 AT3G59850.1 39.093 353 207 6 27 375 23 371 1.59e-79 250
Msa0782920 AT3G59850.2 39.093 353 207 6 27 375 67 415 2.39e-79 251
Msa0782920 AT2G41850.1 36.104 385 230 9 16 392 57 433 2.85e-76 243
Msa0782920 AT1G65570.1 36.579 380 231 8 5 378 8 383 6.92e-74 236
Msa0782920 AT3G57510.1 34.884 387 238 9 11 390 52 431 1.28e-72 233
Msa0782920 AT1G80170.1 37.283 346 207 6 26 364 52 394 2.50e-71 230
Msa0782920 AT1G70500.1 36.533 375 224 8 25 389 65 435 4.19e-71 231
Msa0782920 AT2G43880.2 41.667 288 162 4 27 312 31 314 4.93e-70 224
Msa0782920 AT2G43860.1 37.127 369 220 9 15 377 21 383 2.23e-69 224
Msa0782920 AT1G48100.1 35.795 352 210 7 26 364 79 427 5.74e-69 225
Msa0782920 AT1G56710.1 35.750 400 218 11 1 364 1 397 2.45e-68 223
Msa0782920 AT3G07970.1 34.748 377 235 8 22 390 66 439 7.90e-68 221
Msa0782920 AT5G44840.1 36.170 376 222 9 11 378 10 375 8.10e-67 217
Msa0782920 AT1G23460.2 35.467 375 228 8 25 389 41 411 9.23e-67 218
Msa0782920 AT1G23460.1 35.467 375 228 8 25 389 65 435 1.33e-66 219
Msa0782920 AT5G27530.1 34.794 388 226 10 1 379 27 396 8.82e-64 211
Msa0782920 AT3G15720.1 34.456 386 232 9 12 387 10 384 9.24e-64 211
Msa0782920 AT3G15720.3 34.456 386 232 9 12 387 9 383 1.10e-63 211
Msa0782920 AT4G35670.1 35.079 382 231 9 6 379 3 375 1.28e-63 209
Msa0782920 AT3G15720.2 34.715 386 228 9 12 387 9 380 3.13e-63 209
Msa0782920 AT4G01890.1 33.983 359 212 12 26 364 64 417 4.42e-58 196
Msa0782920 AT1G02460.1 34.358 358 212 11 26 364 88 441 5.49e-58 197
Msa0782920 AT3G26610.1 34.278 353 218 8 26 369 66 413 6.28e-58 196
Msa0782920 AT5G44830.1 36.637 333 187 8 52 378 2 316 9.27e-58 192
Msa0782920 AT4G32380.1 33.854 384 226 11 10 375 5 378 9.36e-58 195
Msa0782920 AT5G14650.1 34.167 360 222 10 25 381 52 399 3.31e-57 193
Msa0782920 AT5G39910.1 33.238 349 166 7 25 364 34 324 5.28e-56 188
Msa0782920 AT3G15720.4 35.061 328 196 6 67 387 3 320 2.34e-55 187
Msa0782920 AT1G80170.2 37.500 264 157 5 26 282 52 314 4.94e-54 182
Msa0782920 AT1G60590.1 31.989 372 215 9 27 364 123 490 9.41e-54 187
Msa0782920 AT1G80140.1 35.987 314 183 8 60 365 4 307 1.44e-53 181
Msa0782920 AT5G17200.1 33.333 399 225 13 20 389 32 418 8.50e-52 179
Msa0782920 AT1G10640.1 32.345 371 216 8 25 364 117 483 2.02e-51 180
Msa0782920 AT4G35670.2 36.101 277 167 4 104 379 1 268 4.94e-50 170
Msa0782920 AT4G32375.1 33.212 274 172 4 105 375 13 278 4.25e-48 169
Msa0782920 AT4G32380.2 33.636 330 198 9 10 327 5 325 2.95e-47 166
Msa0782920 AT4G32370.1 33.642 324 189 11 2 310 10 322 4.71e-47 164
Msa0782920 AT5G14650.2 35.081 248 155 5 34 278 60 304 1.08e-39 144
Msa0782920 AT5G41870.1 26.042 288 168 11 26 277 44 322 7.02e-12 67.0
Msa0782920 AT3G48950.1 26.901 171 106 4 120 277 159 323 3.42e-11 65.1

Find 81 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTATCAATGGATTAAATT+TGG 0.144207 5_2:-66470321 Msa0782920:CDS
AAACTTTCATGTCAATGTTT+TGG 0.199633 5_2:-66469701 Msa0782920:CDS
TGTTCAACAGCTTCTTCTTT+TGG 0.257521 5_2:+66469451 None:intergenic
GCTGCAGTTGTTGTGCATTT+AGG 0.262567 5_2:+66468945 None:intergenic
TTAACACATTTAGCGTTTAC+TGG 0.264248 5_2:+66468996 None:intergenic
TCCTAAAGCATTCAATTGTT+CGG 0.306003 5_2:-66469747 Msa0782920:CDS
ATCTTTGATATAAAATCATT+TGG 0.321131 5_2:-66470827 Msa0782920:CDS
CCTAAAGCATTCAATTGTTC+GGG 0.321876 5_2:-66469746 Msa0782920:CDS
AATGTTGCTCTTACATTCAA+TGG 0.323054 5_2:-66469023 Msa0782920:CDS
CAGGTCCACAATTCACATTT+TGG 0.326679 5_2:+66469509 None:intergenic
CCCGAACAATTGAATGCTTT+AGG 0.333830 5_2:+66469746 None:intergenic
TCAGTGTTTATGCTTGTAAC+TGG 0.338580 5_2:+66469637 None:intergenic
TCCTTATTGTTTGCAACGCT+TGG 0.346075 5_2:-66470866 Msa0782920:CDS
GGTCAATGATCACTGGGTTT+AGG 0.350968 5_2:+66469302 None:intergenic
TCCAAGCGTTGCAAACAATA+AGG 0.351732 5_2:+66470865 None:intergenic
AATGTCGAGCCTATTCTTAC+AGG 0.362694 5_2:-66468975 Msa0782920:CDS
CCTATTGAAGTTCAAGTTGA+TGG 0.376197 5_2:-66470384 Msa0782920:CDS
GGAATTAGTGTTGGAAGCTT+AGG 0.384131 5_2:-66469481 Msa0782920:CDS
TAAGCATCATTAAGTTCATC+AGG 0.384599 5_2:+66470339 None:intergenic
CAAGACCTGGCCTAGTTCTC+CGG 0.386266 5_2:-66469377 Msa0782920:CDS
CAACAACTGCAAGCAAAGTT+AGG 0.392188 5_2:-66470464 Msa0782920:CDS
TCAGTAATCGGAGACGTTCC+CGG 0.393664 5_2:+66469358 None:intergenic
TTGGAATCAATGCTCAAAAC+TGG 0.406184 5_2:-66469266 Msa0782920:intron
ATGCATGCTGTAGATGTAAA+AGG 0.415509 5_2:-66470420 Msa0782920:CDS
CCATCAACTTGAACTTCAAT+AGG 0.415583 5_2:+66470384 None:intergenic
TCAAAATGCATATCAGTAAT+CGG 0.423258 5_2:+66469346 None:intergenic
AAGTTATCTTCAAGAACATC+AGG 0.426204 5_2:-66469121 Msa0782920:CDS
TTTCAATGTGAACAGAACTT+TGG 0.426227 5_2:-66469778 Msa0782920:intron
TGGAGATGATTGTGTCTCAT+TGG 0.430112 5_2:-66469557 Msa0782920:CDS
ATTAGGCCTTTACAAATGCT+TGG 0.431043 5_2:-66470503 Msa0782920:intron
GGAGTTGGTCCTGTAAGAAT+AGG 0.434330 5_2:+66468966 None:intergenic
TACTCTTGGTCAATGATCAC+TGG 0.438721 5_2:+66469295 None:intergenic
TGCATCTTGTATACCCCTCT+TGG 0.440904 5_2:+66470438 None:intergenic
AACTTAATGATGCTTATCAA+TGG 0.446303 5_2:-66470332 Msa0782920:CDS
GCTTGTAACTGGAGCAGTTA+TGG 0.462422 5_2:+66469648 None:intergenic
GGAGACGTTCCCGGAGAACT+AGG 0.494257 5_2:+66469367 None:intergenic
CTCAACACAAACATTGCTAC+TGG 0.495907 5_2:-66469577 Msa0782920:CDS
GATTCCAAGGACAATACTCT+TGG 0.504808 5_2:+66469281 None:intergenic
TATAAGAACCACTCCATCCT+TGG 0.505187 5_2:+66469085 None:intergenic
TGCTTTCCAAGCATTTGTAA+AGG 0.512646 5_2:+66470497 None:intergenic
TTGACCAAGAGTATTGTCCT+TGG 0.513299 5_2:-66469285 Msa0782920:CDS
ATGGTAATGGTGAAACTGCT+TGG 0.513617 5_2:-66470257 Msa0782920:CDS
TTTGATATAAAATCATTTGG+AGG 0.515308 5_2:-66470824 Msa0782920:CDS
GTTGTTGTGCATTTAGGAGT+TGG 0.516336 5_2:+66468951 None:intergenic
AGATGTAAAAGGTCCTTGTA+AGG 0.526895 5_2:-66470409 Msa0782920:CDS
GGCACTTCAAAGACCAAGGA+TGG 0.536177 5_2:-66469098 Msa0782920:CDS
ACTTCAATAGGAGCCTTACA+AGG 0.540286 5_2:+66470396 None:intergenic
AAGACCTGGCCTAGTTCTCC+GGG 0.541102 5_2:-66469376 Msa0782920:CDS
AACTAATAATCAACATGGAT+AGG 0.549661 5_2:-66470916 None:intergenic
GACACTATCAAATGTGAAGT+TGG 0.550914 5_2:+66469672 None:intergenic
GTGAATTGTGGACCTGGCCA+TGG 0.551852 5_2:-66469502 Msa0782920:CDS
GGAGATGATTGTGTCTCATT+GGG 0.552814 5_2:-66469556 Msa0782920:CDS
CATTGTTATATCTGCATGAG+AGG 0.557573 5_2:+66470799 None:intergenic
GTTACAAGCATAAACACTGA+TGG 0.562557 5_2:-66469634 Msa0782920:CDS
AGCTTCCAACACTAATTCCA+TGG 0.570135 5_2:+66469485 None:intergenic
ACTCTTGGTCAATGATCACT+GGG 0.572903 5_2:+66469296 None:intergenic
AACACTGATGGAATACACAT+TGG 0.573807 5_2:-66469622 Msa0782920:CDS
CGTTCCCGGAGAACTAGGCC+AGG 0.584285 5_2:+66469372 None:intergenic
GCTTGGAGACAAAATGATTG+TGG 0.586530 5_2:-66470240 Msa0782920:CDS
CCTGGCCATGGAATTAGTGT+TGG 0.589051 5_2:-66469490 Msa0782920:CDS
CAAAATGTGAATTGTGGACC+TGG 0.593835 5_2:-66469508 Msa0782920:CDS
CCAACACTAATTCCATGGCC+AGG 0.596782 5_2:+66469490 None:intergenic
GCAAAGTTAGGATTCCAAGA+GGG 0.601468 5_2:-66470452 Msa0782920:CDS
CAAAGTTAGGATTCCAAGAG+GGG 0.605603 5_2:-66470451 Msa0782920:CDS
GATTGTGTCTCATTGGGAGA+TGG 0.609787 5_2:-66469550 Msa0782920:CDS
AAGCATCATTAAGTTCATCA+GGG 0.611991 5_2:+66470340 None:intergenic
TTCAAAGACCAAGGATGGAG+TGG 0.613535 5_2:-66469093 Msa0782920:CDS
CACATGCAAGAGACGTTCCA+TGG 0.616857 5_2:-66470208 Msa0782920:intron
AGCAAAGTTAGGATTCCAAG+AGG 0.618880 5_2:-66470453 Msa0782920:CDS
TTTAGCTCAATAGCATCACA+TGG 0.622030 5_2:+66469047 None:intergenic
ACCATCACAAATACTGACAA+TGG 0.631144 5_2:-66469409 Msa0782920:CDS
CATGGAACGTCTCTTGCATG+TGG 0.636591 5_2:+66470209 None:intergenic
AGTTATCTTCAAGAACATCA+GGG 0.642521 5_2:-66469120 Msa0782920:CDS
ACCATTGTCAGTATTTGTGA+TGG 0.650695 5_2:+66469408 None:intergenic
CTCTCATGCAGATATAACAA+TGG 0.652149 5_2:-66470798 Msa0782920:intron
AATGCTTGGAAAGCAGCATG+TGG 0.653455 5_2:-66470489 Msa0782920:CDS
ATGGTGTGAGGATCAAGACC+TGG 0.668470 5_2:-66469390 Msa0782920:CDS
CAGGGGCACTTCAAAGACCA+AGG 0.672890 5_2:-66469102 Msa0782920:CDS
GTTATCTTCAAGAACATCAG+GGG 0.677796 5_2:-66469119 Msa0782920:CDS
CAAATACTGACAATGGTGTG+AGG 0.682831 5_2:-66469402 Msa0782920:CDS
ACTGTCCAAAATGTGAATTG+TGG 0.683587 5_2:-66469514 Msa0782920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATAAAAATTATCAATT+TGG + chr5_2:66469934-66469953 None:intergenic 10.0%
!!! TATTATATATTATTTTTTCC+AGG - chr5_2:66470669-66470688 Msa0782920:intron 10.0%
!! AAGAATAAAAATTATCAATT+TGG + chr5_2:66469934-66469953 None:intergenic 10.0%
!!! TATTATATATTATTTTTTCC+AGG - chr5_2:66470669-66470688 Msa0782920:intron 10.0%
!!! GATTTTATATCAAAGATATT+AGG + chr5_2:66469007-66469026 None:intergenic 15.0%
!! ATCTTTGATATAAAATCATT+TGG - chr5_2:66469010-66469029 Msa0782920:CDS 15.0%
!! AAAAATTAGTGATTTCTATA+AGG - chr5_2:66469079-66469098 Msa0782920:CDS 15.0%
!! AAAATTAGTGATTTCTATAA+GGG - chr5_2:66469080-66469099 Msa0782920:CDS 15.0%
!! AAAATTGAACTTAGATAAAA+TGG + chr5_2:66469161-66469180 None:intergenic 15.0%
!!! TAAATTATTTTCATTTACCA+TGG + chr5_2:66469649-66469668 None:intergenic 15.0%
!! TGAGAAAATAAAAAACTATT+TGG + chr5_2:66469963-66469982 None:intergenic 15.0%
!!! TATTTTCTCAATAACTAATT+TGG - chr5_2:66469973-66469992 Msa0782920:intron 15.0%
!!! GATTTTATATCAAAGATATT+AGG + chr5_2:66469007-66469026 None:intergenic 15.0%
!! ATCTTTGATATAAAATCATT+TGG - chr5_2:66469010-66469029 Msa0782920:CDS 15.0%
!! AAAAATTAGTGATTTCTATA+AGG - chr5_2:66469079-66469098 Msa0782920:CDS 15.0%
!! AAAATTAGTGATTTCTATAA+GGG - chr5_2:66469080-66469099 Msa0782920:CDS 15.0%
!! AAAATTGAACTTAGATAAAA+TGG + chr5_2:66469161-66469180 None:intergenic 15.0%
!!! TAAATTATTTTCATTTACCA+TGG + chr5_2:66469649-66469668 None:intergenic 15.0%
!! TGAGAAAATAAAAAACTATT+TGG + chr5_2:66469963-66469982 None:intergenic 15.0%
!!! TATTTTCTCAATAACTAATT+TGG - chr5_2:66469973-66469992 Msa0782920:intron 15.0%
!! TTTGATATAAAATCATTTGG+AGG - chr5_2:66469013-66469032 Msa0782920:CDS 20.0%
!!! GTTCAATTTTTTTTTGTCTT+AGG - chr5_2:66469171-66469190 Msa0782920:intron 20.0%
!!! AATTTTAAGAGTGACATATT+TGG + chr5_2:66469245-66469264 None:intergenic 20.0%
!! ATGTTATCAATATCATTGTA+TGG - chr5_2:66469272-66469291 Msa0782920:CDS 20.0%
!!! TATTTTACTTTATCAGGTAA+AGG - chr5_2:66469549-66469568 Msa0782920:CDS 20.0%
!! AGTAAATTTGATGTTGTATT+TGG - chr5_2:66469777-66469796 Msa0782920:intron 20.0%
!!! TTGCTAATCTTTATTTTTGA+TGG + chr5_2:66470697-66470716 None:intergenic 20.0%
!! TTTGATATAAAATCATTTGG+AGG - chr5_2:66469013-66469032 Msa0782920:CDS 20.0%
!!! GTTCAATTTTTTTTTGTCTT+AGG - chr5_2:66469171-66469190 Msa0782920:intron 20.0%
!!! AATTTTAAGAGTGACATATT+TGG + chr5_2:66469245-66469264 None:intergenic 20.0%
!! ATGTTATCAATATCATTGTA+TGG - chr5_2:66469272-66469291 Msa0782920:CDS 20.0%
!!! TATTTTACTTTATCAGGTAA+AGG - chr5_2:66469549-66469568 Msa0782920:CDS 20.0%
!! AGTAAATTTGATGTTGTATT+TGG - chr5_2:66469777-66469796 Msa0782920:intron 20.0%
!!! TTGCTAATCTTTATTTTTGA+TGG + chr5_2:66470697-66470716 None:intergenic 20.0%
! TGAACTTAGATAAAATGGTA+TGG + chr5_2:66469156-66469175 None:intergenic 25.0%
! AACTTAATGATGCTTATCAA+TGG - chr5_2:66469505-66469524 Msa0782920:CDS 25.0%
!!! GCTTATCAATGGATTAAATT+TGG - chr5_2:66469516-66469535 Msa0782920:CDS 25.0%
!! GTTGACTATTTTACTTTATC+AGG - chr5_2:66469543-66469562 Msa0782920:CDS 25.0%
!! ATTTTCATTTCAATGCTACT+CGG - chr5_2:66469672-66469691 Msa0782920:CDS 25.0%
! ATATGTAACATTGAAAATCG+AGG + chr5_2:66469753-66469772 None:intergenic 25.0%
! TCTCTTAAAATCTCAAATAC+CGG - chr5_2:66469823-66469842 Msa0782920:intron 25.0%
! CTATAAAAAACTATCTTGAC+CGG + chr5_2:66469845-66469864 None:intergenic 25.0%
!! AAACTTTCATGTCAATGTTT+TGG - chr5_2:66470136-66470155 Msa0782920:intron 25.0%
!! AACTTTCATGTCAATGTTTT+GGG - chr5_2:66470137-66470156 Msa0782920:intron 25.0%
! TCAAAATGCATATCAGTAAT+CGG + chr5_2:66470494-66470513 None:intergenic 25.0%
!!! GCATTTTGAAGATATTATCA+TGG - chr5_2:66470505-66470524 Msa0782920:intron 25.0%
! TGAACTTAGATAAAATGGTA+TGG + chr5_2:66469156-66469175 None:intergenic 25.0%
! AACTTAATGATGCTTATCAA+TGG - chr5_2:66469505-66469524 Msa0782920:CDS 25.0%
!!! GCTTATCAATGGATTAAATT+TGG - chr5_2:66469516-66469535 Msa0782920:CDS 25.0%
!! GTTGACTATTTTACTTTATC+AGG - chr5_2:66469543-66469562 Msa0782920:CDS 25.0%
!! ATTTTCATTTCAATGCTACT+CGG - chr5_2:66469672-66469691 Msa0782920:CDS 25.0%
! ATATGTAACATTGAAAATCG+AGG + chr5_2:66469753-66469772 None:intergenic 25.0%
! TCTCTTAAAATCTCAAATAC+CGG - chr5_2:66469823-66469842 Msa0782920:intron 25.0%
! CTATAAAAAACTATCTTGAC+CGG + chr5_2:66469845-66469864 None:intergenic 25.0%
!! AAACTTTCATGTCAATGTTT+TGG - chr5_2:66470136-66470155 Msa0782920:intron 25.0%
!! AACTTTCATGTCAATGTTTT+GGG - chr5_2:66470137-66470156 Msa0782920:intron 25.0%
! TCAAAATGCATATCAGTAAT+CGG + chr5_2:66470494-66470513 None:intergenic 25.0%
!!! GCATTTTGAAGATATTATCA+TGG - chr5_2:66470505-66470524 Msa0782920:intron 25.0%
ATTAGTGATTTCTATAAGGG+TGG - chr5_2:66469083-66469102 Msa0782920:CDS 30.0%
!!! TTTTTTTGTCTTAGGTCGAA+TGG - chr5_2:66469179-66469198 Msa0782920:intron 30.0%
GCTAATATGTTGTGTCAATT+AGG - chr5_2:66469317-66469336 Msa0782920:CDS 30.0%
AAGCATCATTAAGTTCATCA+GGG + chr5_2:66469500-66469519 None:intergenic 30.0%
TAAGCATCATTAAGTTCATC+AGG + chr5_2:66469501-66469520 None:intergenic 30.0%
!!! AAAGGTGTTTTTGATGGTAA+TGG - chr5_2:66469567-66469586 Msa0782920:CDS 30.0%
TTTCAATGTGAACAGAACTT+TGG - chr5_2:66470059-66470078 Msa0782920:intron 30.0%
! TCCTAAAGCATTCAATTGTT+CGG - chr5_2:66470090-66470109 Msa0782920:intron 30.0%
TTGAAACATTCAACATAGTG+AGG - chr5_2:66470646-66470665 Msa0782920:intron 30.0%
!!! TCTTTATTTTTGATGGAACC+TGG + chr5_2:66470690-66470709 None:intergenic 30.0%
AAGTTATCTTCAAGAACATC+AGG - chr5_2:66470716-66470735 Msa0782920:intron 30.0%
AGTTATCTTCAAGAACATCA+GGG - chr5_2:66470717-66470736 Msa0782920:intron 30.0%
AATGTTGCTCTTACATTCAA+TGG - chr5_2:66470814-66470833 Msa0782920:CDS 30.0%
TTAACACATTTAGCGTTTAC+TGG + chr5_2:66470844-66470863 None:intergenic 30.0%
ATTAGTGATTTCTATAAGGG+TGG - chr5_2:66469083-66469102 Msa0782920:CDS 30.0%
!!! TTTTTTTGTCTTAGGTCGAA+TGG - chr5_2:66469179-66469198 Msa0782920:intron 30.0%
GCTAATATGTTGTGTCAATT+AGG - chr5_2:66469317-66469336 Msa0782920:CDS 30.0%
AAGCATCATTAAGTTCATCA+GGG + chr5_2:66469500-66469519 None:intergenic 30.0%
TAAGCATCATTAAGTTCATC+AGG + chr5_2:66469501-66469520 None:intergenic 30.0%
!!! AAAGGTGTTTTTGATGGTAA+TGG - chr5_2:66469567-66469586 Msa0782920:CDS 30.0%
TTTCAATGTGAACAGAACTT+TGG - chr5_2:66470059-66470078 Msa0782920:intron 30.0%
! TCCTAAAGCATTCAATTGTT+CGG - chr5_2:66470090-66470109 Msa0782920:intron 30.0%
TTGAAACATTCAACATAGTG+AGG - chr5_2:66470646-66470665 Msa0782920:intron 30.0%
!!! TCTTTATTTTTGATGGAACC+TGG + chr5_2:66470690-66470709 None:intergenic 30.0%
AAGTTATCTTCAAGAACATC+AGG - chr5_2:66470716-66470735 Msa0782920:intron 30.0%
AGTTATCTTCAAGAACATCA+GGG - chr5_2:66470717-66470736 Msa0782920:intron 30.0%
AATGTTGCTCTTACATTCAA+TGG - chr5_2:66470814-66470833 Msa0782920:CDS 30.0%
TTAACACATTTAGCGTTTAC+TGG + chr5_2:66470844-66470863 None:intergenic 30.0%
CATTGTTATATCTGCATGAG+AGG + chr5_2:66469041-66469060 None:intergenic 35.0%
CTCTCATGCAGATATAACAA+TGG - chr5_2:66469039-66469058 Msa0782920:CDS 35.0%
CAATTTATGCAGTACTGTAG+AGG - chr5_2:66469217-66469236 Msa0782920:intron 35.0%
ATTAGGCCTTTACAAATGCT+TGG - chr5_2:66469334-66469353 Msa0782920:CDS 35.0%
TGCTTTCCAAGCATTTGTAA+AGG + chr5_2:66469343-66469362 None:intergenic 35.0%
ATGCATGCTGTAGATGTAAA+AGG - chr5_2:66469417-66469436 Msa0782920:CDS 35.0%
AGATGTAAAAGGTCCTTGTA+AGG - chr5_2:66469428-66469447 Msa0782920:CDS 35.0%
CCATCAACTTGAACTTCAAT+AGG + chr5_2:66469456-66469475 None:intergenic 35.0%
!! CCTATTGAAGTTCAAGTTGA+TGG - chr5_2:66469453-66469472 Msa0782920:CDS 35.0%
! TTAAGTTCATCAGGGTTTTG+TGG + chr5_2:66469492-66469511 None:intergenic 35.0%
!!! TCAGGTAAAGGTGTTTTTGA+TGG - chr5_2:66469561-66469580 Msa0782920:CDS 35.0%
! CCTAAAGCATTCAATTGTTC+GGG - chr5_2:66470091-66470110 Msa0782920:intron 35.0%
GACACTATCAAATGTGAAGT+TGG + chr5_2:66470168-66470187 None:intergenic 35.0%
TCAGTGTTTATGCTTGTAAC+TGG + chr5_2:66470203-66470222 None:intergenic 35.0%
GTTACAAGCATAAACACTGA+TGG - chr5_2:66470203-66470222 Msa0782920:intron 35.0%
AACACTGATGGAATACACAT+TGG - chr5_2:66470215-66470234 Msa0782920:CDS 35.0%
ACTGTCCAAAATGTGAATTG+TGG - chr5_2:66470323-66470342 Msa0782920:CDS 35.0%
! TGTTCAACAGCTTCTTCTTT+TGG + chr5_2:66470389-66470408 None:intergenic 35.0%
ACCATCACAAATACTGACAA+TGG - chr5_2:66470428-66470447 Msa0782920:CDS 35.0%
ACCATTGTCAGTATTTGTGA+TGG + chr5_2:66470432-66470451 None:intergenic 35.0%
!!! AGTTTTGAGCATTGATTCCA+AGG + chr5_2:66470572-66470591 None:intergenic 35.0%
TTGGAATCAATGCTCAAAAC+TGG - chr5_2:66470571-66470590 Msa0782920:intron 35.0%
GTTATCTTCAAGAACATCAG+GGG - chr5_2:66470718-66470737 Msa0782920:intron 35.0%
! TTTAGCTCAATAGCATCACA+TGG + chr5_2:66470793-66470812 None:intergenic 35.0%
CATTGTTATATCTGCATGAG+AGG + chr5_2:66469041-66469060 None:intergenic 35.0%
CTCTCATGCAGATATAACAA+TGG - chr5_2:66469039-66469058 Msa0782920:CDS 35.0%
CAATTTATGCAGTACTGTAG+AGG - chr5_2:66469217-66469236 Msa0782920:intron 35.0%
ATTAGGCCTTTACAAATGCT+TGG - chr5_2:66469334-66469353 Msa0782920:CDS 35.0%
TGCTTTCCAAGCATTTGTAA+AGG + chr5_2:66469343-66469362 None:intergenic 35.0%
ATGCATGCTGTAGATGTAAA+AGG - chr5_2:66469417-66469436 Msa0782920:CDS 35.0%
AGATGTAAAAGGTCCTTGTA+AGG - chr5_2:66469428-66469447 Msa0782920:CDS 35.0%
CCATCAACTTGAACTTCAAT+AGG + chr5_2:66469456-66469475 None:intergenic 35.0%
!! CCTATTGAAGTTCAAGTTGA+TGG - chr5_2:66469453-66469472 Msa0782920:CDS 35.0%
! TTAAGTTCATCAGGGTTTTG+TGG + chr5_2:66469492-66469511 None:intergenic 35.0%
!!! TCAGGTAAAGGTGTTTTTGA+TGG - chr5_2:66469561-66469580 Msa0782920:CDS 35.0%
! CCTAAAGCATTCAATTGTTC+GGG - chr5_2:66470091-66470110 Msa0782920:intron 35.0%
GACACTATCAAATGTGAAGT+TGG + chr5_2:66470168-66470187 None:intergenic 35.0%
TCAGTGTTTATGCTTGTAAC+TGG + chr5_2:66470203-66470222 None:intergenic 35.0%
GTTACAAGCATAAACACTGA+TGG - chr5_2:66470203-66470222 Msa0782920:intron 35.0%
AACACTGATGGAATACACAT+TGG - chr5_2:66470215-66470234 Msa0782920:CDS 35.0%
ACTGTCCAAAATGTGAATTG+TGG - chr5_2:66470323-66470342 Msa0782920:CDS 35.0%
! TGTTCAACAGCTTCTTCTTT+TGG + chr5_2:66470389-66470408 None:intergenic 35.0%
ACCATCACAAATACTGACAA+TGG - chr5_2:66470428-66470447 Msa0782920:CDS 35.0%
ACCATTGTCAGTATTTGTGA+TGG + chr5_2:66470432-66470451 None:intergenic 35.0%
!!! AGTTTTGAGCATTGATTCCA+AGG + chr5_2:66470572-66470591 None:intergenic 35.0%
TTGGAATCAATGCTCAAAAC+TGG - chr5_2:66470571-66470590 Msa0782920:intron 35.0%
GTTATCTTCAAGAACATCAG+GGG - chr5_2:66470718-66470737 Msa0782920:intron 35.0%
! TTTAGCTCAATAGCATCACA+TGG + chr5_2:66470793-66470812 None:intergenic 35.0%
TCCTTATTGTTTGCAACGCT+TGG - chr5_2:66468971-66468990 Msa0782920:CDS 40.0%
! TCCAAGCGTTGCAAACAATA+AGG + chr5_2:66468975-66468994 None:intergenic 40.0%
ATAAGGGTGGCTCTTATGTT+AGG - chr5_2:66469096-66469115 Msa0782920:CDS 40.0%
ACATCAAGTGCAGTGTTGTA+GGG + chr5_2:66469125-66469144 None:intergenic 40.0%
CTGCATAAATTGCATGCAGT+GGG + chr5_2:66469209-66469228 None:intergenic 40.0%
ACTGCATAAATTGCATGCAG+TGG + chr5_2:66469210-66469229 None:intergenic 40.0%
CAACAACTGCAAGCAAAGTT+AGG - chr5_2:66469373-66469392 Msa0782920:CDS 40.0%
AGCAAAGTTAGGATTCCAAG+AGG - chr5_2:66469384-66469403 Msa0782920:CDS 40.0%
GCAAAGTTAGGATTCCAAGA+GGG - chr5_2:66469385-66469404 Msa0782920:CDS 40.0%
CAAAGTTAGGATTCCAAGAG+GGG - chr5_2:66469386-66469405 Msa0782920:CDS 40.0%
ACTTCAATAGGAGCCTTACA+AGG + chr5_2:66469444-66469463 None:intergenic 40.0%
!! ATGGTAATGGTGAAACTGCT+TGG - chr5_2:66469580-66469599 Msa0782920:CDS 40.0%
GCTTGGAGACAAAATGATTG+TGG - chr5_2:66469597-66469616 Msa0782920:CDS 40.0%
CCCGAACAATTGAATGCTTT+AGG + chr5_2:66470094-66470113 None:intergenic 40.0%
CTCAACACAAACATTGCTAC+TGG - chr5_2:66470260-66470279 Msa0782920:CDS 40.0%
TGGAGATGATTGTGTCTCAT+TGG - chr5_2:66470280-66470299 Msa0782920:CDS 40.0%
GGAGATGATTGTGTCTCATT+GGG - chr5_2:66470281-66470300 Msa0782920:CDS 40.0%
! CAGGTCCACAATTCACATTT+TGG + chr5_2:66470331-66470350 None:intergenic 40.0%
CAAAATGTGAATTGTGGACC+TGG - chr5_2:66470329-66470348 Msa0782920:CDS 40.0%
AGCTTCCAACACTAATTCCA+TGG + chr5_2:66470355-66470374 None:intergenic 40.0%
! GGAATTAGTGTTGGAAGCTT+AGG - chr5_2:66470356-66470375 Msa0782920:CDS 40.0%
CAAATACTGACAATGGTGTG+AGG - chr5_2:66470435-66470454 Msa0782920:CDS 40.0%
ACTCTTGGTCAATGATCACT+GGG + chr5_2:66470544-66470563 None:intergenic 40.0%
TACTCTTGGTCAATGATCAC+TGG + chr5_2:66470545-66470564 None:intergenic 40.0%
!! TTGACCAAGAGTATTGTCCT+TGG - chr5_2:66470552-66470571 Msa0782920:intron 40.0%
GATTCCAAGGACAATACTCT+TGG + chr5_2:66470559-66470578 None:intergenic 40.0%
TATAAGAACCACTCCATCCT+TGG + chr5_2:66470755-66470774 None:intergenic 40.0%
AATGTCGAGCCTATTCTTAC+AGG - chr5_2:66470862-66470881 Msa0782920:CDS 40.0%
GTTGTTGTGCATTTAGGAGT+TGG + chr5_2:66470889-66470908 None:intergenic 40.0%
TCCTTATTGTTTGCAACGCT+TGG - chr5_2:66468971-66468990 Msa0782920:CDS 40.0%
! TCCAAGCGTTGCAAACAATA+AGG + chr5_2:66468975-66468994 None:intergenic 40.0%
ATAAGGGTGGCTCTTATGTT+AGG - chr5_2:66469096-66469115 Msa0782920:CDS 40.0%
ACATCAAGTGCAGTGTTGTA+GGG + chr5_2:66469125-66469144 None:intergenic 40.0%
CTGCATAAATTGCATGCAGT+GGG + chr5_2:66469209-66469228 None:intergenic 40.0%
ACTGCATAAATTGCATGCAG+TGG + chr5_2:66469210-66469229 None:intergenic 40.0%
CAACAACTGCAAGCAAAGTT+AGG - chr5_2:66469373-66469392 Msa0782920:CDS 40.0%
AGCAAAGTTAGGATTCCAAG+AGG - chr5_2:66469384-66469403 Msa0782920:CDS 40.0%
GCAAAGTTAGGATTCCAAGA+GGG - chr5_2:66469385-66469404 Msa0782920:CDS 40.0%
CAAAGTTAGGATTCCAAGAG+GGG - chr5_2:66469386-66469405 Msa0782920:CDS 40.0%
ACTTCAATAGGAGCCTTACA+AGG + chr5_2:66469444-66469463 None:intergenic 40.0%
!! ATGGTAATGGTGAAACTGCT+TGG - chr5_2:66469580-66469599 Msa0782920:CDS 40.0%
GCTTGGAGACAAAATGATTG+TGG - chr5_2:66469597-66469616 Msa0782920:CDS 40.0%
CCCGAACAATTGAATGCTTT+AGG + chr5_2:66470094-66470113 None:intergenic 40.0%
CTCAACACAAACATTGCTAC+TGG - chr5_2:66470260-66470279 Msa0782920:CDS 40.0%
TGGAGATGATTGTGTCTCAT+TGG - chr5_2:66470280-66470299 Msa0782920:CDS 40.0%
GGAGATGATTGTGTCTCATT+GGG - chr5_2:66470281-66470300 Msa0782920:CDS 40.0%
! CAGGTCCACAATTCACATTT+TGG + chr5_2:66470331-66470350 None:intergenic 40.0%
CAAAATGTGAATTGTGGACC+TGG - chr5_2:66470329-66470348 Msa0782920:CDS 40.0%
AGCTTCCAACACTAATTCCA+TGG + chr5_2:66470355-66470374 None:intergenic 40.0%
! GGAATTAGTGTTGGAAGCTT+AGG - chr5_2:66470356-66470375 Msa0782920:CDS 40.0%
CAAATACTGACAATGGTGTG+AGG - chr5_2:66470435-66470454 Msa0782920:CDS 40.0%
ACTCTTGGTCAATGATCACT+GGG + chr5_2:66470544-66470563 None:intergenic 40.0%
TACTCTTGGTCAATGATCAC+TGG + chr5_2:66470545-66470564 None:intergenic 40.0%
!! TTGACCAAGAGTATTGTCCT+TGG - chr5_2:66470552-66470571 Msa0782920:intron 40.0%
GATTCCAAGGACAATACTCT+TGG + chr5_2:66470559-66470578 None:intergenic 40.0%
TATAAGAACCACTCCATCCT+TGG + chr5_2:66470755-66470774 None:intergenic 40.0%
AATGTCGAGCCTATTCTTAC+AGG - chr5_2:66470862-66470881 Msa0782920:CDS 40.0%
GTTGTTGTGCATTTAGGAGT+TGG + chr5_2:66470889-66470908 None:intergenic 40.0%
CATCAAGTGCAGTGTTGTAG+GGG + chr5_2:66469124-66469143 None:intergenic 45.0%
CACATCAAGTGCAGTGTTGT+AGG + chr5_2:66469126-66469145 None:intergenic 45.0%
CAACACTGCACTTGATGTGA+CGG - chr5_2:66469127-66469146 Msa0782920:CDS 45.0%
AATGCTTGGAAAGCAGCATG+TGG - chr5_2:66469348-66469367 Msa0782920:CDS 45.0%
TGCATCTTGTATACCCCTCT+TGG + chr5_2:66469402-66469421 None:intergenic 45.0%
TGTGTACCAATCACTTGCGT+TGG - chr5_2:66469726-66469745 Msa0782920:CDS 45.0%
GCTTGTAACTGGAGCAGTTA+TGG + chr5_2:66470192-66470211 None:intergenic 45.0%
GATTGTGTCTCATTGGGAGA+TGG - chr5_2:66470287-66470306 Msa0782920:CDS 45.0%
GGTCAATGATCACTGGGTTT+AGG + chr5_2:66470538-66470557 None:intergenic 45.0%
TTCAAAGACCAAGGATGGAG+TGG - chr5_2:66470744-66470763 Msa0782920:intron 45.0%
! GGAGTTGGTCCTGTAAGAAT+AGG + chr5_2:66470874-66470893 None:intergenic 45.0%
GCTGCAGTTGTTGTGCATTT+AGG + chr5_2:66470895-66470914 None:intergenic 45.0%
CATCAAGTGCAGTGTTGTAG+GGG + chr5_2:66469124-66469143 None:intergenic 45.0%
CACATCAAGTGCAGTGTTGT+AGG + chr5_2:66469126-66469145 None:intergenic 45.0%
CAACACTGCACTTGATGTGA+CGG - chr5_2:66469127-66469146 Msa0782920:CDS 45.0%
AATGCTTGGAAAGCAGCATG+TGG - chr5_2:66469348-66469367 Msa0782920:CDS 45.0%
TGCATCTTGTATACCCCTCT+TGG + chr5_2:66469402-66469421 None:intergenic 45.0%
TGTGTACCAATCACTTGCGT+TGG - chr5_2:66469726-66469745 Msa0782920:CDS 45.0%
GCTTGTAACTGGAGCAGTTA+TGG + chr5_2:66470192-66470211 None:intergenic 45.0%
GATTGTGTCTCATTGGGAGA+TGG - chr5_2:66470287-66470306 Msa0782920:CDS 45.0%
GGTCAATGATCACTGGGTTT+AGG + chr5_2:66470538-66470557 None:intergenic 45.0%
TTCAAAGACCAAGGATGGAG+TGG - chr5_2:66470744-66470763 Msa0782920:intron 45.0%
! GGAGTTGGTCCTGTAAGAAT+AGG + chr5_2:66470874-66470893 None:intergenic 45.0%
GCTGCAGTTGTTGTGCATTT+AGG + chr5_2:66470895-66470914 None:intergenic 45.0%
CATGGAACGTCTCTTGCATG+TGG + chr5_2:66469631-66469650 None:intergenic 50.0%
CACATGCAAGAGACGTTCCA+TGG - chr5_2:66469629-66469648 Msa0782920:CDS 50.0%
CCAACACTAATTCCATGGCC+AGG + chr5_2:66470350-66470369 None:intergenic 50.0%
CCTGGCCATGGAATTAGTGT+TGG - chr5_2:66470347-66470366 Msa0782920:CDS 50.0%
ATGGTGTGAGGATCAAGACC+TGG - chr5_2:66470447-66470466 Msa0782920:CDS 50.0%
TCAGTAATCGGAGACGTTCC+CGG + chr5_2:66470482-66470501 None:intergenic 50.0%
GGCACTTCAAAGACCAAGGA+TGG - chr5_2:66470739-66470758 Msa0782920:intron 50.0%
CATGGAACGTCTCTTGCATG+TGG + chr5_2:66469631-66469650 None:intergenic 50.0%
CACATGCAAGAGACGTTCCA+TGG - chr5_2:66469629-66469648 Msa0782920:CDS 50.0%
CCAACACTAATTCCATGGCC+AGG + chr5_2:66470350-66470369 None:intergenic 50.0%
CCTGGCCATGGAATTAGTGT+TGG - chr5_2:66470347-66470366 Msa0782920:CDS 50.0%
ATGGTGTGAGGATCAAGACC+TGG - chr5_2:66470447-66470466 Msa0782920:CDS 50.0%
TCAGTAATCGGAGACGTTCC+CGG + chr5_2:66470482-66470501 None:intergenic 50.0%
GGCACTTCAAAGACCAAGGA+TGG - chr5_2:66470739-66470758 Msa0782920:intron 50.0%
CGAGGTCCAACGCAAGTGAT+TGG + chr5_2:66469735-66469754 None:intergenic 55.0%
GTGAATTGTGGACCTGGCCA+TGG - chr5_2:66470335-66470354 Msa0782920:CDS 55.0%
! CAAGACCTGGCCTAGTTCTC+CGG - chr5_2:66470460-66470479 Msa0782920:CDS 55.0%
! AAGACCTGGCCTAGTTCTCC+GGG - chr5_2:66470461-66470480 Msa0782920:CDS 55.0%
!! CAGGGGCACTTCAAAGACCA+AGG - chr5_2:66470735-66470754 Msa0782920:intron 55.0%
CGAGGTCCAACGCAAGTGAT+TGG + chr5_2:66469735-66469754 None:intergenic 55.0%
GTGAATTGTGGACCTGGCCA+TGG - chr5_2:66470335-66470354 Msa0782920:CDS 55.0%
! CAAGACCTGGCCTAGTTCTC+CGG - chr5_2:66470460-66470479 Msa0782920:CDS 55.0%
! AAGACCTGGCCTAGTTCTCC+GGG - chr5_2:66470461-66470480 Msa0782920:CDS 55.0%
!! CAGGGGCACTTCAAAGACCA+AGG - chr5_2:66470735-66470754 Msa0782920:intron 55.0%
GGAGACGTTCCCGGAGAACT+AGG + chr5_2:66470473-66470492 None:intergenic 60.0%
GGAGACGTTCCCGGAGAACT+AGG + chr5_2:66470473-66470492 None:intergenic 60.0%
CGTTCCCGGAGAACTAGGCC+AGG + chr5_2:66470468-66470487 None:intergenic 65.0%
CGTTCCCGGAGAACTAGGCC+AGG + chr5_2:66470468-66470487 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 66468935 66470924 66468935 ID=Msa0782920;Name=Msa0782920
chr5_2 mRNA 66468935 66470924 66468935 ID=Msa0782920-mRNA-1;Parent=Msa0782920;Name=Msa0782920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|396
chr5_2 exon 66470799 66470924 66470799 ID=Msa0782920-mRNA-1:exon:19986;Parent=Msa0782920-mRNA-1
chr5_2 exon 66470209 66470520 66470209 ID=Msa0782920-mRNA-1:exon:19985;Parent=Msa0782920-mRNA-1
chr5_2 exon 66469267 66469785 66469267 ID=Msa0782920-mRNA-1:exon:19984;Parent=Msa0782920-mRNA-1
chr5_2 exon 66468935 66469168 66468935 ID=Msa0782920-mRNA-1:exon:19983;Parent=Msa0782920-mRNA-1
chr5_2 CDS 66470799 66470924 66470799 ID=Msa0782920-mRNA-1:cds;Parent=Msa0782920-mRNA-1
chr5_2 CDS 66470209 66470520 66470209 ID=Msa0782920-mRNA-1:cds;Parent=Msa0782920-mRNA-1
chr5_2 CDS 66469267 66469785 66469267 ID=Msa0782920-mRNA-1:cds;Parent=Msa0782920-mRNA-1
chr5_2 CDS 66468935 66469168 66468935 ID=Msa0782920-mRNA-1:cds;Parent=Msa0782920-mRNA-1
Gene Sequence

>Msa0782920

ATGGATAGGAAATTAAGTATTACAACAATTGTTTTATCCTTATTGTTTGCAACGCTTGGAATAGCTCAACCTAATATCTTTGATATAAAATCATTTGGAGGAGCCTCTCATGCAGATATAACAATGGCCTTTACAAATGCTTGGAAAGCAGCATGTGGATCAACAACTGCAAGCAAAGTTAGGATTCCAAGAGGGGTATACAAGATGCATGCTGTAGATGTAAAAGGTCCTTGTAAGGCTCCTATTGAAGTTCAAGTTGATGGCACAATTCAAGCACCACAAAACCCTGATGAACTTAATGATGCTTATCAATGGATTAAATTTGGATATGTTGACTATTTTACTTTATCAGGTAAAGGTGTTTTTGATGGTAATGGTGAAACTGCTTGGAGACAAAATGATTGTGGAAAAAACTCCACATGCAAGAGACGTTCCATGAACTTTGGTTTTAATTTCCTAAAGCATTCAATTGTTCGGGACATAACTTCAAAAGACAGCAAAAACTTTCATGTCAATGTTTTGGGTTGCACCAACTTCACATTTGATAGTGTCACCATAACTGCTCCAGTTACAAGCATAAACACTGATGGAATACACATTGGAAGATCAACTGATGTGAAAGTTCTCAACACAAACATTGCTACTGGAGATGATTGTGTCTCATTGGGAGATGGAAGCAGACAAATAACTGTCCAAAATGTGAATTGTGGACCTGGCCATGGAATTAGTGTTGGAAGCTTAGGAAAGTATCCAAAAGAAGAAGCTGTTGAACACGTTCTAGTCAAGAATTGCACCATCACAAATACTGACAATGGTGTGAGGATCAAGACCTGGCCTAGTTCTCCGGGAACGTCTCCGATTACTGATATGCATTTTGAAGATATTATCATGGTTAATGTCCTAAACCCAGTGATCATTGACCAAGAGTATTGTCCTTGGAATCAATGCTCAAAACTGGTTCCATCAAAAATAAAGATTAGCAAAGTTATCTTCAAGAACATCAGGGGCACTTCAAAGACCAAGGATGGAGTGGTTCTTATATGTAGCAAGAGTTTTCCATGTGATGCTATTGAGCTAAATAATGTTGCTCTTACATTCAATGGAGCTCCAGTAAACGCTAAATGTGTTAATGTCGAGCCTATTCTTACAGGACCAACTCCTAAATGCACAACAACTGCAGCAGAAGCTTAG
Protein sequence

>Msa0782920

MDRKLSITTIVLSLLFATLGIAQPNIFDIKSFGGASHADITMAFTNAWKAACGSTTASKVRIPRGVYKMHAVDVKGPCKAPIEVQVDGTIQAPQNPDELNDAYQWIKFGYVDYFTLSGKGVFDGNGETAWRQNDCGKNSTCKRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTFDSVTITAPVTSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGDGSRQITVQNVNCGPGHGISVGSLGKYPKEEAVEHVLVKNCTITNTDNGVRIKTWPSSPGTSPITDMHFEDIIMVNVLNPVIIDQEYCPWNQCSKLVPSKIKISKVIFKNIRGTSKTKDGVVLICSKSFPCDAIELNNVALTFNGAPVNAKCVNVEPILTGPTPKCTTTAAEA*