Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783230 | G7KH71 | 96.667 | 210 | 6 | 1 | 1 | 210 | 1 | 209 | 2.00e-147 | 417 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0783230 | Msa0819560 | 0.805356 | 1.388954e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783230 | MtrunA17_Chr5g0438771 | 96.667 | 210 | 6 | 1 | 1 | 210 | 1 | 209 | 3.86e-151 | 417 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783230 | AT1G04985.1 | 55.102 | 196 | 82 | 2 | 1 | 196 | 1 | 190 | 5.80e-66 | 202 |
| Msa0783230 | AT1G04985.2 | 50.746 | 134 | 60 | 2 | 64 | 197 | 6 | 133 | 2.40e-38 | 129 |
Find 73 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCATGTATTGATACTAAT+TGG | 0.119433 | 5_2:+67064765 | None:intergenic |
| CCAAGCATTTGCCATCTTCT+AGG | 0.208392 | 5_2:+67064943 | None:intergenic |
| TAAGAATAATGCAGCGATTA+AGG | 0.242778 | 5_2:-67070959 | Msa0783230:exon |
| CCAAGCATTGGCCACCCTTT+AGG | 0.263639 | 5_2:+67064910 | None:intergenic |
| GTGCAAAATCTGGCTATAAT+TGG | 0.285824 | 5_2:+67064700 | None:intergenic |
| GCCGGAACCACCTTACTTAT+CGG | 0.313619 | 5_2:-67069413 | Msa0783230:CDS |
| AAATGCACATACCTTACTTT+TGG | 0.324400 | 5_2:-67064558 | Msa0783230:three_prime_UTR |
| TCCGGCACTTTGGTTCTTCT+AGG | 0.335965 | 5_2:+67064853 | None:intergenic |
| TATAATACCGGTGCAAAATC+TGG | 0.340864 | 5_2:+67064690 | None:intergenic |
| CCCGATAAGTAAGGTGGTTC+CGG | 0.350075 | 5_2:+67069412 | None:intergenic |
| AACTTGAATTGCCACCCTTT+AGG | 0.373440 | 5_2:+67064877 | None:intergenic |
| AACATCTGAAACGACAATAA+AGG | 0.381576 | 5_2:-67064818 | Msa0783230:CDS |
| TCTGAAATCAAAGATATTGT+TGG | 0.411064 | 5_2:-67069476 | Msa0783230:CDS |
| TTCATGTATTGATACTAATT+GGG | 0.412560 | 5_2:+67064766 | None:intergenic |
| CCGGAACCACCTTACTTATC+GGG | 0.413100 | 5_2:-67069412 | Msa0783230:intron |
| GATATATACAGCTTGTTCAA+TGG | 0.421041 | 5_2:+67069612 | None:intergenic |
| GATTATGAAATTTATAATGA+AGG | 0.421066 | 5_2:-67064581 | Msa0783230:three_prime_UTR |
| CCTAAAGGGTGGCCAATGCT+TGG | 0.430902 | 5_2:-67064910 | Msa0783230:CDS |
| ATACAGCTTGTTCAATGGAT+TGG | 0.438567 | 5_2:+67069617 | None:intergenic |
| AAAGATATTGTTGGTCGTCC+TGG | 0.446008 | 5_2:-67069467 | Msa0783230:CDS |
| CTAAAGGGTGGCCAATGCTT+GGG | 0.447978 | 5_2:-67064909 | Msa0783230:CDS |
| AGCTAAGGGCAAGGAGCAGC+AGG | 0.452161 | 5_2:+67064658 | None:intergenic |
| ACACAACCAAGAAGTTCAAA+AGG | 0.463950 | 5_2:-67064996 | Msa0783230:CDS |
| CCGGCACTTTGGTTCTTCTA+GGG | 0.468972 | 5_2:+67064854 | None:intergenic |
| CCTGCTTGTGCAGCCACTGC+CGG | 0.471438 | 5_2:-67069431 | Msa0783230:CDS |
| GCATCATCGACACATATTGC+TGG | 0.474418 | 5_2:-67064793 | Msa0783230:CDS |
| TATATATGCAGATATGGATT+GGG | 0.475331 | 5_2:-67065039 | Msa0783230:intron |
| TGGGATGGCGAGGTGGAAGC+TGG | 0.476493 | 5_2:-67065020 | Msa0783230:CDS |
| CACTGCAGTATCCGGCACTT+TGG | 0.480264 | 5_2:+67064843 | None:intergenic |
| AAGTAAGGTGGTTCCGGCAG+TGG | 0.484097 | 5_2:+67069418 | None:intergenic |
| CTTGGGAACATAAAACCTAA+AGG | 0.490631 | 5_2:-67064892 | Msa0783230:CDS |
| CTTGTCAAACACCAAAAGTA+AGG | 0.491045 | 5_2:+67064547 | None:intergenic |
| CTTGGCAAGTTAAAACCTAA+AGG | 0.491699 | 5_2:-67064925 | Msa0783230:CDS |
| CCGGCAGTGGCTGCACAAGC+AGG | 0.492970 | 5_2:+67069431 | None:intergenic |
| TTATATATGCAGATATGGAT+TGG | 0.495399 | 5_2:-67065040 | Msa0783230:intron |
| TGAAACAAACCCGATAAGTA+AGG | 0.498368 | 5_2:+67069403 | None:intergenic |
| GGATGAAGAACATGAAGCTA+AGG | 0.509109 | 5_2:+67064643 | None:intergenic |
| ATAATACATGTTATATAACT+TGG | 0.520380 | 5_2:+67064438 | None:intergenic |
| TTGGGAACATAAAACCTAAA+GGG | 0.521479 | 5_2:-67064891 | Msa0783230:CDS |
| AGCAACGGAGAATGAATTTG+AGG | 0.522905 | 5_2:+67070920 | None:intergenic |
| TCCGTCGCTACTGCTTTCAT+CGG | 0.524613 | 5_2:-67070706 | Msa0783230:intron |
| TTGGCAAGTTAAAACCTAAA+GGG | 0.526369 | 5_2:-67064924 | Msa0783230:CDS |
| GCAGGAATACTGACCCCTCC+AGG | 0.529267 | 5_2:+67069449 | None:intergenic |
| ATATAACTTGGTCATTCCGC+AGG | 0.529280 | 5_2:+67064450 | None:intergenic |
| GAAGGAGCGAATTACCTTAG+TGG | 0.533461 | 5_2:+67070842 | None:intergenic |
| AGCAGTAGCGACGGATGCAA+TGG | 0.534561 | 5_2:+67070714 | None:intergenic |
| GACAGATTAAACCTAGAAGA+TGG | 0.534682 | 5_2:-67064954 | Msa0783230:CDS |
| CCTAGAAGATGGCAAATGCT+TGG | 0.544955 | 5_2:-67064943 | Msa0783230:CDS |
| CCCTAGAAGAACCAAAGTGC+CGG | 0.554042 | 5_2:-67064854 | Msa0783230:CDS |
| CTTAGACACTCTTCACATGA+AGG | 0.554706 | 5_2:+67064622 | None:intergenic |
| ATATTGTTGGTCGTCCTGGA+GGG | 0.567058 | 5_2:-67069463 | Msa0783230:CDS |
| TTTGCGTTTAATGTTAGCAA+CGG | 0.573762 | 5_2:+67070905 | None:intergenic |
| TCCTCGTAGTGGATGACTCA+AGG | 0.576732 | 5_2:-67071044 | Msa0783230:five_prime_UTR |
| ATGAAACAAGAGTTAATGAA+AGG | 0.583936 | 5_2:-67069642 | Msa0783230:CDS |
| CACAACCAAGAAGTTCAAAA+GGG | 0.587225 | 5_2:-67064995 | Msa0783230:CDS |
| AGGGAGCAGATGAAATTGCT+AGG | 0.588060 | 5_2:-67064976 | Msa0783230:CDS |
| ATATCTCTCTCTCCTCGTAG+TGG | 0.590294 | 5_2:-67071055 | Msa0783230:five_prime_UTR |
| AAGTTTGTGAGAAATGTCAA+TGG | 0.595845 | 5_2:-67071113 | Msa0783230:five_prime_UTR |
| TATTGTTGGTCGTCCTGGAG+GGG | 0.605606 | 5_2:-67069462 | Msa0783230:CDS |
| GATATTGTTGGTCGTCCTGG+AGG | 0.617569 | 5_2:-67069464 | Msa0783230:CDS |
| ACCGATGAAAGCAGTAGCGA+CGG | 0.626790 | 5_2:+67070705 | None:intergenic |
| GATGAAGAACATGAAGCTAA+GGG | 0.628168 | 5_2:+67064644 | None:intergenic |
| TATGCAGATATGGATTGGGA+TGG | 0.631005 | 5_2:-67065035 | Msa0783230:intron |
| AGAACATGAAGCTAAGGGCA+AGG | 0.640862 | 5_2:+67064649 | None:intergenic |
| TATGGATTGGGATGGCGAGG+TGG | 0.652966 | 5_2:-67065027 | Msa0783230:CDS |
| AGATATGGATTGGGATGGCG+AGG | 0.656407 | 5_2:-67065030 | Msa0783230:CDS |
| ATAGTAATTATGTGTTCCTG+CGG | 0.657257 | 5_2:-67064466 | Msa0783230:three_prime_UTR |
| GCAAGTTAAAACCTAAAGGG+TGG | 0.665984 | 5_2:-67064921 | Msa0783230:CDS |
| AACAAACCCGATAAGTAAGG+TGG | 0.674337 | 5_2:+67069406 | None:intergenic |
| GGAACATAAAACCTAAAGGG+TGG | 0.674717 | 5_2:-67064888 | Msa0783230:CDS |
| TCGTCTAATCAGATAAACTG+AGG | 0.692608 | 5_2:-67064739 | Msa0783230:three_prime_UTR |
| ACCTTGAGTCATCCACTACG+AGG | 0.729673 | 5_2:+67071043 | None:intergenic |
| TTCCAACCGTGAAAACAACG+CGG | 0.823624 | 5_2:+67070740 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAAATAGTTATATATA+AGG | - | chr5_2:67065066-67065085 | Msa0783230:intron | 10.0% |
| !! | CTATTAAGTAATATAATTAA+TGG | - | chr5_2:67065679-67065698 | Msa0783230:intron | 10.0% |
| !!! | ATTTTTTGGTTTAAAATTTT+AGG | - | chr5_2:67065872-67065891 | Msa0783230:intron | 10.0% |
| !!! | TTTTTTGGTTTAAAATTTTA+GGG | - | chr5_2:67065873-67065892 | Msa0783230:intron | 10.0% |
| !!! | TATCATTTAGTTTTATTATT+AGG | - | chr5_2:67066442-67066461 | Msa0783230:intron | 10.0% |
| !!! | ATCATTTAGTTTTATTATTA+GGG | - | chr5_2:67066443-67066462 | Msa0783230:intron | 10.0% |
| !! | TAGAATAAAATACATATTAT+TGG | + | chr5_2:67067676-67067695 | None:intergenic | 10.0% |
| !!! | AAATTAAAGTATTTATTACT+AGG | + | chr5_2:67068234-67068253 | None:intergenic | 10.0% |
| !!! | TAATTTACAATTTGTTTTTT+AGG | - | chr5_2:67068248-67068267 | Msa0783230:intron | 10.0% |
| !! | ATTCATTAAATTAATAAAAG+TGG | - | chr5_2:67068283-67068302 | Msa0783230:intron | 10.0% |
| !! | AACAATCAAAATATAATTAA+TGG | - | chr5_2:67068537-67068556 | Msa0783230:intron | 10.0% |
| !! | ATATAGTAAGTTAAGTTATA+GGG | - | chr5_2:67065098-67065117 | Msa0783230:intron | 15.0% |
| !! | TCTATTAAACTATATCAAAT+TGG | + | chr5_2:67065157-67065176 | None:intergenic | 15.0% |
| !! | TGAATATGAATATTTGAAAA+AGG | + | chr5_2:67065188-67065207 | None:intergenic | 15.0% |
| !! | AGATTATGAATATTTCAAAA+AGG | + | chr5_2:67065518-67065537 | None:intergenic | 15.0% |
| !! | TATAAAAAGAAGTTAATCAT+AGG | + | chr5_2:67066196-67066215 | None:intergenic | 15.0% |
| !!! | ACAAAAATTAATTTAGTTCA+TGG | - | chr5_2:67067046-67067065 | Msa0783230:intron | 15.0% |
| !!! | TTTTTTTTTTTGCAAATGAT+TGG | - | chr5_2:67067414-67067433 | Msa0783230:intron | 15.0% |
| !!! | TTTTTTTTTTGCAAATGATT+GGG | - | chr5_2:67067415-67067434 | Msa0783230:intron | 15.0% |
| !! | TTACAAAATGTGAAAATAAA+AGG | + | chr5_2:67067864-67067883 | None:intergenic | 15.0% |
| !!! | CACATTTTGTAAAATAAAAA+TGG | - | chr5_2:67067872-67067891 | Msa0783230:intron | 15.0% |
| !! | ATACGACTTATTTAAATAAA+TGG | + | chr5_2:67067955-67067974 | None:intergenic | 15.0% |
| !! | TAGACATTCTTAATTAAATT+TGG | - | chr5_2:67068377-67068396 | Msa0783230:intron | 15.0% |
| !! | AATTTGCGTATATTAAAAAT+AGG | - | chr5_2:67068570-67068589 | Msa0783230:intron | 15.0% |
| !! | TATACATTCTACTAATAAAA+AGG | + | chr5_2:67068616-67068635 | None:intergenic | 15.0% |
| !!! | GAATTTTTTTAATGTAATCT+GGG | - | chr5_2:67068883-67068902 | Msa0783230:intron | 15.0% |
| !!! | TTTAATTTCACTAATATAGA+AGG | - | chr5_2:67070136-67070155 | Msa0783230:intron | 15.0% |
| !!! | AATTTAAAATTAAGACTACA+AGG | + | chr5_2:67070493-67070512 | None:intergenic | 15.0% |
| !! | AGGAAAAAATAATATAATAC+CGG | + | chr5_2:67070882-67070901 | None:intergenic | 15.0% |
| !! | GATTATGAAATTTATAATGA+AGG | - | chr5_2:67070976-67070995 | Msa0783230:five_prime_UTR | 15.0% |
| !! | ATAATACATGTTATATAACT+TGG | + | chr5_2:67071122-67071141 | None:intergenic | 15.0% |
| !! | GATATAGTAAGTTAAGTTAT+AGG | - | chr5_2:67065097-67065116 | Msa0783230:intron | 20.0% |
| !! | ATATTGAGTGGTTAAATATA+GGG | - | chr5_2:67065130-67065149 | Msa0783230:intron | 20.0% |
| !! | GATATAGTTTAATAGAGTTA+AGG | - | chr5_2:67065161-67065180 | Msa0783230:intron | 20.0% |
| !! | TATTCATATTCATAATCTCA+AGG | - | chr5_2:67065196-67065215 | Msa0783230:intron | 20.0% |
| !! | ATTCATATTCATAATCTCAA+GGG | - | chr5_2:67065197-67065216 | Msa0783230:intron | 20.0% |
| !! | AAATATAAGAACCAATTTGA+TGG | - | chr5_2:67065470-67065489 | Msa0783230:intron | 20.0% |
| !!! | TTTGAAATATTCATAATCTC+AGG | - | chr5_2:67065519-67065538 | Msa0783230:intron | 20.0% |
| !! | TTGAAATATTCATAATCTCA+GGG | - | chr5_2:67065520-67065539 | Msa0783230:intron | 20.0% |
| !! | ATTATTTACGAGTTAACATA+AGG | + | chr5_2:67065621-67065640 | None:intergenic | 20.0% |
| !! | TAAATAATAATTTGACAGCA+AGG | - | chr5_2:67065633-67065652 | Msa0783230:intron | 20.0% |
| !! | AAATAATAATTTGACAGCAA+GGG | - | chr5_2:67065634-67065653 | Msa0783230:intron | 20.0% |
| !! | ATAATTAATGGAGTAATTTG+AGG | - | chr5_2:67065691-67065710 | Msa0783230:intron | 20.0% |
| !! | ATCAAATATACAATCAAATC+AGG | + | chr5_2:67065847-67065866 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTTATTATTAGGG+CGG | - | chr5_2:67066446-67066465 | Msa0783230:intron | 20.0% |
| !!! | AAAGATTGATTGCAATTTTA+TGG | - | chr5_2:67066485-67066504 | Msa0783230:intron | 20.0% |
| !!! | TTGTACTTGTTTAATTTACT+TGG | - | chr5_2:67066636-67066655 | Msa0783230:intron | 20.0% |
| !!! | TGTATATTCAGCATTTTTTA+TGG | - | chr5_2:67066694-67066713 | Msa0783230:intron | 20.0% |
| !! | TTCAGCAAATTAATAAAGAA+AGG | - | chr5_2:67066730-67066749 | Msa0783230:intron | 20.0% |
| !! | TCAGCAAATTAATAAAGAAA+GGG | - | chr5_2:67066731-67066750 | Msa0783230:intron | 20.0% |
| !!! | CTAAATTAATTTTTGTGATG+TGG | + | chr5_2:67067042-67067061 | None:intergenic | 20.0% |
| !! | AAGATGAAAAGATAGATAAA+AGG | + | chr5_2:67067327-67067346 | None:intergenic | 20.0% |
| !!! | TTTTATCTATCTTTTCATCT+TGG | - | chr5_2:67067326-67067345 | Msa0783230:intron | 20.0% |
| !!! | TTTTTCATTAAGTAAGAGTA+AGG | - | chr5_2:67067500-67067519 | Msa0783230:intron | 20.0% |
| !! | TAACAAATACTATAGCTTAA+AGG | - | chr5_2:67067555-67067574 | Msa0783230:intron | 20.0% |
| !! | TATAGCTTAAAGGTAAAAAT+TGG | - | chr5_2:67067565-67067584 | Msa0783230:intron | 20.0% |
| !! | TAGAAAAAGAAACAAATCAA+GGG | + | chr5_2:67067827-67067846 | None:intergenic | 20.0% |
| !! | TTAGAAAAAGAAACAAATCA+AGG | + | chr5_2:67067828-67067847 | None:intergenic | 20.0% |
| !!! | CTTATTTAAATAAATGGACT+TGG | + | chr5_2:67067949-67067968 | None:intergenic | 20.0% |
| !!! | TATTTTTTACCAGAAGAATT+GGG | + | chr5_2:67068182-67068201 | None:intergenic | 20.0% |
| !!! | ATATTTTTTACCAGAAGAAT+TGG | + | chr5_2:67068183-67068202 | None:intergenic | 20.0% |
| !! | ATTTATTACTAGGAATTTGA+AGG | + | chr5_2:67068224-67068243 | None:intergenic | 20.0% |
| !! | AAAAATTTATGCGCTTAAAA+CGG | - | chr5_2:67068307-67068326 | Msa0783230:intron | 20.0% |
| !! | TGTCTATCAAATTAACTATA+TGG | + | chr5_2:67068363-67068382 | None:intergenic | 20.0% |
| !!! | TTCGGTAATAATTCTTTTAA+GGG | + | chr5_2:67068750-67068769 | None:intergenic | 20.0% |
| !!! | GGAATTTTTTTAATGTAATC+TGG | - | chr5_2:67068882-67068901 | Msa0783230:intron | 20.0% |
| !!! | AAATTTTCTTTTAAGCTTAG+TGG | + | chr5_2:67068921-67068940 | None:intergenic | 20.0% |
| !! | TGAAAATGTTAAGATTTAAG+TGG | - | chr5_2:67069032-67069051 | Msa0783230:intron | 20.0% |
| !!! | GAAAGTTAAATTTTGAAAGT+TGG | - | chr5_2:67069710-67069729 | Msa0783230:intron | 20.0% |
| !!! | AAACTAAAAGGGTATAAAAA+TGG | - | chr5_2:67070006-67070025 | Msa0783230:intron | 20.0% |
| !!! | TTCATGTATTGATACTAATT+GGG | + | chr5_2:67070794-67070813 | None:intergenic | 20.0% |
| !!! | ATTCATGTATTGATACTAAT+TGG | + | chr5_2:67070795-67070814 | None:intergenic | 20.0% |
| !!! | TTCATTGATTTTAAGATTGT+TGG | - | chr5_2:67071067-67071086 | Msa0783230:five_prime_UTR | 20.0% |
| !! | TTAGACTTTTGAATGTTTCA+TGG | - | chr5_2:67064476-67064495 | Msa0783230:three_prime_UTR | 25.0% |
| !!! | CATCATTTTTCTGTTATTAC+AGG | - | chr5_2:67064778-67064797 | Msa0783230:exon | 25.0% |
| ! | ATTCATATTAGTCATTCTGA+AGG | - | chr5_2:67065024-67065043 | Msa0783230:CDS | 25.0% |
| ! | GATATTGAGTGGTTAAATAT+AGG | - | chr5_2:67065129-67065148 | Msa0783230:intron | 25.0% |
| !! | TTTTGCATAAGCTCAAAAAA+AGG | + | chr5_2:67065277-67065296 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr5_2:67065326-67065345 | Msa0783230:intron | 25.0% |
| ! | GCTAAATTAAACCATCAAAT+TGG | + | chr5_2:67065484-67065503 | None:intergenic | 25.0% |
| ! | TTCAACATAATTCAAAGTCA+GGG | - | chr5_2:67065740-67065759 | Msa0783230:intron | 25.0% |
| ! | ATGAAACAAGAGTTAATGAA+AGG | - | chr5_2:67065915-67065934 | Msa0783230:intron | 25.0% |
| ! | TGTATATATCTATGTCTCTT+TGG | - | chr5_2:67065958-67065977 | Msa0783230:intron | 25.0% |
| !! | TCTGAAATCAAAGATATTGT+TGG | - | chr5_2:67066081-67066100 | Msa0783230:intron | 25.0% |
| !! | ACTTCTTTTTATAGCCAAAT+TGG | - | chr5_2:67066203-67066222 | Msa0783230:intron | 25.0% |
| ! | AGATGATGTTAACTATCAAT+TGG | + | chr5_2:67066354-67066373 | None:intergenic | 25.0% |
| ! | TTAATTTACTTGGTCAAAGT+TGG | - | chr5_2:67066646-67066665 | Msa0783230:intron | 25.0% |
| ! | CAGCAAATTAATAAAGAAAG+GGG | - | chr5_2:67066732-67066751 | Msa0783230:intron | 25.0% |
| !! | CACTCAAAAGTATGTATTAA+GGG | - | chr5_2:67067231-67067250 | Msa0783230:intron | 25.0% |
| !! | ACTCAAAAGTATGTATTAAG+GGG | - | chr5_2:67067232-67067251 | Msa0783230:intron | 25.0% |
| ! | CATGTTTATTAAACATGTCT+TGG | + | chr5_2:67067354-67067373 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGTGCATTG+TGG | + | chr5_2:67067391-67067410 | None:intergenic | 25.0% |
| !! | TGAAAAATCGTGTATTTCTA+AGG | + | chr5_2:67067487-67067506 | None:intergenic | 25.0% |
| ! | TTAAATAAGTCGTATTCTCT+TGG | - | chr5_2:67067960-67067979 | Msa0783230:intron | 25.0% |
| ! | TAATCGTGTAAAACTCAAAA+AGG | - | chr5_2:67068064-67068083 | Msa0783230:intron | 25.0% |
| !!! | ATTTTTTTTCCCAATTCTTC+TGG | - | chr5_2:67068170-67068189 | Msa0783230:intron | 25.0% |
| !! | CTTCGGTAATAATTCTTTTA+AGG | + | chr5_2:67068751-67068770 | None:intergenic | 25.0% |
| ! | GTATAATGTAGATGAAATCA+AGG | - | chr5_2:67068861-67068880 | Msa0783230:intron | 25.0% |
| !! | GAACTTGATGATTAGTTATA+AGG | - | chr5_2:67068975-67068994 | Msa0783230:intron | 25.0% |
| ! | TTATTGGACAATTCTCTATT+CGG | + | chr5_2:67069212-67069231 | None:intergenic | 25.0% |
| ! | TAGAGAATTGTCCAATAATT+AGG | - | chr5_2:67069214-67069233 | Msa0783230:intron | 25.0% |
| ! | AGAGAATTGTCCAATAATTA+GGG | - | chr5_2:67069215-67069234 | Msa0783230:intron | 25.0% |
| !!! | CACTATTTTAGTAAATGATG+CGG | + | chr5_2:67069369-67069388 | None:intergenic | 25.0% |
| ! | TACTTCTAAATCTCTCTTAA+TGG | + | chr5_2:67069501-67069520 | None:intergenic | 25.0% |
| ! | GTAAATTTAATCACATCACA+AGG | + | chr5_2:67069794-67069813 | None:intergenic | 25.0% |
| ! | AAAACAAATCCAGAACAATT+TGG | + | chr5_2:67069922-67069941 | None:intergenic | 25.0% |
| !!! | AAATTGTTCTGGATTTGTTT+TGG | - | chr5_2:67069921-67069940 | Msa0783230:intron | 25.0% |
| !! | GTTCTTTCTTTTATGTAATG+AGG | - | chr5_2:67069943-67069962 | Msa0783230:intron | 25.0% |
| ! | ATGTAGGCAAATAAACTAAA+AGG | - | chr5_2:67069994-67070013 | Msa0783230:intron | 25.0% |
| ! | TGTAGGCAAATAAACTAAAA+GGG | - | chr5_2:67069995-67070014 | Msa0783230:intron | 25.0% |
| ! | ATCATATGGAGAAAAGAATT+TGG | + | chr5_2:67070043-67070062 | None:intergenic | 25.0% |
| !! | TTCTTTTCTCCATATGATAA+TGG | - | chr5_2:67070045-67070064 | Msa0783230:intron | 25.0% |
| ! | ATTTATATGTCCAAGTATAC+AGG | + | chr5_2:67070246-67070265 | None:intergenic | 25.0% |
| ! | TTAGCTTATATATGCAGATA+TGG | - | chr5_2:67070512-67070531 | Msa0783230:intron | 25.0% |
| ! | TTATATATGCAGATATGGAT+TGG | - | chr5_2:67070517-67070536 | Msa0783230:intron | 25.0% |
| ! | TATATATGCAGATATGGATT+GGG | - | chr5_2:67070518-67070537 | Msa0783230:intron | 25.0% |
| AAGTTTGTGAGAAATGTCAA+TGG | - | chr5_2:67064444-67064463 | Msa0783230:three_prime_UTR | 30.0% | |
| TAAGAATAATGCAGCGATTA+AGG | - | chr5_2:67064598-67064617 | Msa0783230:three_prime_UTR | 30.0% | |
| TTTGCGTTTAATGTTAGCAA+CGG | + | chr5_2:67064655-67064674 | None:intergenic | 30.0% | |
| ! | AGATACTTTTCATTCCACTA+AGG | - | chr5_2:67064701-67064720 | Msa0783230:three_prime_UTR | 30.0% |
| ATTGATGTAAATGTCCTACT+CGG | + | chr5_2:67064919-67064938 | None:intergenic | 30.0% | |
| AGTAGGACATTTACATCAAT+AGG | - | chr5_2:67064919-67064938 | Msa0783230:CDS | 30.0% | |
| GGGATATAATTGATATTGAG+TGG | - | chr5_2:67065118-67065137 | Msa0783230:intron | 30.0% | |
| TTTGTAGAATGCTCTCAAAT+AGG | + | chr5_2:67065223-67065242 | None:intergenic | 30.0% | |
| !! | TATTTGAGAGCATTCTACAA+AGG | - | chr5_2:67065222-67065241 | Msa0783230:intron | 30.0% |
| ! | CAAGCTTATTTGATAGTTAG+TGG | - | chr5_2:67065445-67065464 | Msa0783230:intron | 30.0% |
| GTTCAACATAATTCAAAGTC+AGG | - | chr5_2:67065739-67065758 | Msa0783230:intron | 30.0% | |
| ! | TTTTGCCTATTCACATAACT+CGG | - | chr5_2:67065767-67065786 | Msa0783230:intron | 30.0% |
| !!! | AAATTTTAGGGTATTCGTTG+CGG | - | chr5_2:67065885-67065904 | Msa0783230:intron | 30.0% |
| ! | GATATATACAGCTTGTTCAA+TGG | + | chr5_2:67065948-67065967 | None:intergenic | 30.0% |
| TTAATCATAGGAAACACTCA+AGG | + | chr5_2:67066184-67066203 | None:intergenic | 30.0% | |
| TACCATGTTAAAATCACAAC+AGG | + | chr5_2:67066424-67066443 | None:intergenic | 30.0% | |
| TATAGTTGAAAGTTCTACCT+TGG | - | chr5_2:67066806-67066825 | Msa0783230:intron | 30.0% | |
| ATAGTTGAAAGTTCTACCTT+GGG | - | chr5_2:67066807-67066826 | Msa0783230:intron | 30.0% | |
| ! | AATCTTTTATCTCGCAGTTT+AGG | - | chr5_2:67066867-67066886 | Msa0783230:intron | 30.0% |
| !! | CAGTTTAGGTGGATTAAATT+AGG | - | chr5_2:67066881-67066900 | Msa0783230:intron | 30.0% |
| AGGTAATTGTATGTGAACTT+TGG | + | chr5_2:67066937-67066956 | None:intergenic | 30.0% | |
| ! | TTAGTCTCTCTATAATTTGC+AGG | + | chr5_2:67066957-67066976 | None:intergenic | 30.0% |
| !!! | TAAGTCATACTGTGTTGTTT+TGG | - | chr5_2:67066982-67067001 | Msa0783230:intron | 30.0% |
| TCGATAAAAAAAACATGCGT+AGG | + | chr5_2:67067125-67067144 | None:intergenic | 30.0% | |
| ! | GCACTCAAAAGTATGTATTA+AGG | - | chr5_2:67067230-67067249 | Msa0783230:intron | 30.0% |
| CAGTGCATACTTATAGTTAT+GGG | + | chr5_2:67067289-67067308 | None:intergenic | 30.0% | |
| TCAGTGCATACTTATAGTTA+TGG | + | chr5_2:67067290-67067309 | None:intergenic | 30.0% | |
| AAAAAATGAATGGAAGGTTC+AGG | - | chr5_2:67067447-67067466 | Msa0783230:intron | 30.0% | |
| !! | GTGCTAATTTTAAGAACTCA+GGG | + | chr5_2:67067654-67067673 | None:intergenic | 30.0% |
| TATTCTCTTGGTCTCATAAT+AGG | - | chr5_2:67067972-67067991 | Msa0783230:intron | 30.0% | |
| TATTACTAGGAATTTGAAGG+AGG | + | chr5_2:67068221-67068240 | None:intergenic | 30.0% | |
| AAACGAAAAAGAAAGACACT+TGG | + | chr5_2:67068336-67068355 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr5_2:67068454-67068473 | None:intergenic | 30.0% | |
| !!! | GAGTGCAAACTTTTTAACTT+CGG | + | chr5_2:67068768-67068787 | None:intergenic | 30.0% |
| !! | ACAGTCTTTAGGATGAAAAT+TGG | - | chr5_2:67069091-67069110 | Msa0783230:intron | 30.0% |
| !! | CAGTCTTTAGGATGAAAATT+GGG | - | chr5_2:67069092-67069111 | Msa0783230:intron | 30.0% |
| GAGAATTGTCCAATAATTAG+GGG | - | chr5_2:67069216-67069235 | Msa0783230:intron | 30.0% | |
| CTAAATCTCTCTTAATGGTT+TGG | + | chr5_2:67069496-67069515 | None:intergenic | 30.0% | |
| AACCAAACAAGTGTTTAGTA+AGG | + | chr5_2:67069638-67069657 | None:intergenic | 30.0% | |
| AAGGTTCACAACTGAAATTT+AGG | + | chr5_2:67069775-67069794 | None:intergenic | 30.0% | |
| GAGAAGAACACAAAAATCAA+GGG | + | chr5_2:67069850-67069869 | None:intergenic | 30.0% | |
| TGAGAAGAACACAAAAATCA+AGG | + | chr5_2:67069851-67069870 | None:intergenic | 30.0% | |
| TAATTATCTTCAGCTATGAC+TGG | + | chr5_2:67069896-67069915 | None:intergenic | 30.0% | |
| TAATTACTGCCAAATTGTTC+TGG | - | chr5_2:67069910-67069929 | Msa0783230:intron | 30.0% | |
| AATGAGGAAATGTATTCACA+AGG | - | chr5_2:67069959-67069978 | Msa0783230:intron | 30.0% | |
| GTGGACAACATAAATAATCA+AGG | - | chr5_2:67070093-67070112 | Msa0783230:intron | 30.0% | |
| ! | AAGGCTGTGAAGATTTATTT+TGG | - | chr5_2:67070112-67070131 | Msa0783230:intron | 30.0% |
| CAGGAAACAAAGAAAAGAAA+CGG | + | chr5_2:67070227-67070246 | None:intergenic | 30.0% | |
| ! | TTCTTTGTTTCCTGTATACT+TGG | - | chr5_2:67070233-67070252 | Msa0783230:intron | 30.0% |
| TAATAGTCATGCTTCTGAAT+TGG | - | chr5_2:67070267-67070286 | Msa0783230:intron | 30.0% | |
| CAAAATGCATAATCAGTAGA+AGG | - | chr5_2:67070335-67070354 | Msa0783230:intron | 30.0% | |
| ATGTGACTCTAATATCTAGT+TGG | + | chr5_2:67070388-67070407 | None:intergenic | 30.0% | |
| TTGGCAAGTTAAAACCTAAA+GGG | - | chr5_2:67070633-67070652 | Msa0783230:intron | 30.0% | |
| TTGGGAACATAAAACCTAAA+GGG | - | chr5_2:67070666-67070685 | Msa0783230:intron | 30.0% | |
| ! | AACATCTGAAACGACAATAA+AGG | - | chr5_2:67070739-67070758 | Msa0783230:CDS | 30.0% |
| ! | AAATGCACATACCTTACTTT+TGG | - | chr5_2:67070999-67071018 | Msa0783230:five_prime_UTR | 30.0% |
| ATAGTAATTATGTGTTCCTG+CGG | - | chr5_2:67071091-67071110 | Msa0783230:five_prime_UTR | 30.0% | |
| AAAGAATTGATGAGAGAGAG+AGG | + | chr5_2:67064752-67064771 | None:intergenic | 35.0% | |
| TTGATGTAAATGTCCTACTC+GGG | + | chr5_2:67064918-67064937 | None:intergenic | 35.0% | |
| AACATTGTTTGCGACTTTGT+AGG | - | chr5_2:67064961-67064980 | Msa0783230:CDS | 35.0% | |
| ACATTGTTTGCGACTTTGTA+GGG | - | chr5_2:67064962-67064981 | Msa0783230:CDS | 35.0% | |
| ! | AGTCATTCTGAAGGTATGTT+AGG | - | chr5_2:67065033-67065052 | Msa0783230:intron | 35.0% |
| ! | GTCATTCTGAAGGTATGTTA+GGG | - | chr5_2:67065034-67065053 | Msa0783230:intron | 35.0% |
| !! | GACCCTAATTTTGATGAAGT+CGG | - | chr5_2:67065585-67065604 | Msa0783230:intron | 35.0% |
| !! | ACCCTAATTTTGATGAAGTC+GGG | - | chr5_2:67065586-67065605 | Msa0783230:intron | 35.0% |
| TTTGCCTATTCACATAACTC+GGG | - | chr5_2:67065768-67065787 | Msa0783230:intron | 35.0% | |
| ! | ATACAGCTTGTTCAATGGAT+TGG | + | chr5_2:67065943-67065962 | None:intergenic | 35.0% |
| TGAAACAAACCCGATAAGTA+AGG | + | chr5_2:67066157-67066176 | None:intergenic | 35.0% | |
| ! | TTTTATAGCCAAATTGGCAG+TGG | - | chr5_2:67066209-67066228 | Msa0783230:intron | 35.0% |
| CAAATTAACCACTGCCAATT+TGG | + | chr5_2:67066220-67066239 | None:intergenic | 35.0% | |
| !! | TTGGCAGTGGTTAATTTGTT+AGG | - | chr5_2:67066222-67066241 | Msa0783230:intron | 35.0% |
| !! | TGGCAGTGGTTAATTTGTTA+GGG | - | chr5_2:67066223-67066242 | Msa0783230:intron | 35.0% |
| CGTGTTATATAGGACATTCA+AGG | + | chr5_2:67066279-67066298 | None:intergenic | 35.0% | |
| TGTCCTATATAACACGACTT+CGG | - | chr5_2:67066283-67066302 | Msa0783230:intron | 35.0% | |
| !! | TGCCTGTTGTGATTTTAACA+TGG | - | chr5_2:67066419-67066438 | Msa0783230:intron | 35.0% |
| ! | TGCTACAGTTTTCCATGTTT+CGG | + | chr5_2:67066576-67066595 | None:intergenic | 35.0% |
| TTACTTGGTCAAAGTTGGAA+AGG | - | chr5_2:67066651-67066670 | Msa0783230:intron | 35.0% | |
| ! | AAAGTTGGAAAGGATTTGGT+GGG | - | chr5_2:67066661-67066680 | Msa0783230:intron | 35.0% |
| !!! | CAGCATTTTTTATGGTAAGC+TGG | - | chr5_2:67066702-67066721 | Msa0783230:intron | 35.0% |
| TATTTCTCCATCAGTGTTTC+AGG | + | chr5_2:67067084-67067103 | None:intergenic | 35.0% | |
| ! | AAGACATATGATAGAGTACC+TGG | - | chr5_2:67067152-67067171 | Msa0783230:intron | 35.0% |
| AAGTATGTATTAAGGGGTCA+TGG | - | chr5_2:67067238-67067257 | Msa0783230:intron | 35.0% | |
| GAGTTGTGGGAAAAAATGAA+TGG | - | chr5_2:67067437-67067456 | Msa0783230:intron | 35.0% | |
| TGTGGGAAAAAATGAATGGA+AGG | - | chr5_2:67067441-67067460 | Msa0783230:intron | 35.0% | |
| !! | GGTGCTAATTTTAAGAACTC+AGG | + | chr5_2:67067655-67067674 | None:intergenic | 35.0% |
| TGTCTCATCTTTGTTGCTAT+TGG | - | chr5_2:67067751-67067770 | Msa0783230:intron | 35.0% | |
| AAGGACACCTATTATAAGAC+AGG | - | chr5_2:67068083-67068102 | Msa0783230:intron | 35.0% | |
| TACTCCTCCTGTCTTATAAT+AGG | + | chr5_2:67068093-67068112 | None:intergenic | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | + | chr5_2:67068449-67068468 | None:intergenic | 35.0% | |
| ! | ACTTGAAAGTATGTGACTTC+AGG | + | chr5_2:67068820-67068839 | None:intergenic | 35.0% |
| ACTAGACATACAGTACTCTA+TGG | - | chr5_2:67068953-67068972 | Msa0783230:intron | 35.0% | |
| CTAAAGACTGTATTCCTAAC+TGG | + | chr5_2:67069082-67069101 | None:intergenic | 35.0% | |
| CAGTTAGGAATACAGTCTTT+AGG | - | chr5_2:67069080-67069099 | Msa0783230:intron | 35.0% | |
| TAGCTGATATGGACAATATG+TGG | - | chr5_2:67069151-67069170 | Msa0783230:intron | 35.0% | |
| ATATGGACAATATGTGGAAG+AGG | - | chr5_2:67069157-67069176 | Msa0783230:intron | 35.0% | |
| ! | TCATATAAGCTCTGGTAAGA+AGG | - | chr5_2:67069181-67069200 | Msa0783230:intron | 35.0% |
| ! | CATATAAGCTCTGGTAAGAA+GGG | - | chr5_2:67069182-67069201 | Msa0783230:intron | 35.0% |
| AGGGAAAAGACAAACAATTG+AGG | + | chr5_2:67069270-67069289 | None:intergenic | 35.0% | |
| CTAACTTGAATAAGGCTGAA+GGG | + | chr5_2:67069289-67069308 | None:intergenic | 35.0% | |
| AGCAGAAGCTAACTTGAATA+AGG | + | chr5_2:67069297-67069316 | None:intergenic | 35.0% | |
| TGCCTTACTAAACACTTGTT+TGG | - | chr5_2:67069633-67069652 | Msa0783230:CDS | 35.0% | |
| ! | TTTTTCATTTCCTCAGTGAG+TGG | + | chr5_2:67069678-67069697 | None:intergenic | 35.0% |
| TTCAGGACACCATTATCATA+TGG | + | chr5_2:67070057-67070076 | None:intergenic | 35.0% | |
| CGAGGATCAAATTTATGTTC+AGG | + | chr5_2:67070074-67070093 | None:intergenic | 35.0% | |
| GAACATAAATTTGATCCTCG+TGG | - | chr5_2:67070074-67070093 | Msa0783230:intron | 35.0% | |
| GATTATTTATGTTGTCCACG+AGG | + | chr5_2:67070092-67070111 | None:intergenic | 35.0% | |
| TAATATAGAAGGACTGTGAG+TGG | - | chr5_2:67070147-67070166 | Msa0783230:intron | 35.0% | |
| AATATAGAAGGACTGTGAGT+GGG | - | chr5_2:67070148-67070167 | Msa0783230:intron | 35.0% | |
| CTGAATTGGAAATACAGAAC+TGG | - | chr5_2:67070281-67070300 | Msa0783230:intron | 35.0% | |
| AACTCAATACTCTCAACACA+GGG | + | chr5_2:67070431-67070450 | None:intergenic | 35.0% | |
| AAACTCAATACTCTCAACAC+AGG | + | chr5_2:67070432-67070451 | None:intergenic | 35.0% | |
| !!! | GTGTTGAGAGTATTGAGTTT+TGG | - | chr5_2:67070432-67070451 | Msa0783230:intron | 35.0% |
| ACACAACCAAGAAGTTCAAA+AGG | - | chr5_2:67070561-67070580 | Msa0783230:intron | 35.0% | |
| CACAACCAAGAAGTTCAAAA+GGG | - | chr5_2:67070562-67070581 | Msa0783230:intron | 35.0% | |
| GACAGATTAAACCTAGAAGA+TGG | - | chr5_2:67070603-67070622 | Msa0783230:intron | 35.0% | |
| CTTGGCAAGTTAAAACCTAA+AGG | - | chr5_2:67070632-67070651 | Msa0783230:intron | 35.0% | |
| CTTGGGAACATAAAACCTAA+AGG | - | chr5_2:67070665-67070684 | Msa0783230:intron | 35.0% | |
| TCGTCTAATCAGATAAACTG+AGG | - | chr5_2:67070818-67070837 | Msa0783230:intron | 35.0% | |
| GTGCAAAATCTGGCTATAAT+TGG | + | chr5_2:67070860-67070879 | None:intergenic | 35.0% | |
| ! | ATTATAGCCAGATTTTGCAC+CGG | - | chr5_2:67070860-67070879 | Msa0783230:CDS | 35.0% |
| TATAATACCGGTGCAAAATC+TGG | + | chr5_2:67070870-67070889 | None:intergenic | 35.0% | |
| GATGAAGAACATGAAGCTAA+GGG | + | chr5_2:67070916-67070935 | None:intergenic | 35.0% | |
| CTTGTCAAACACCAAAAGTA+AGG | + | chr5_2:67071013-67071032 | None:intergenic | 35.0% | |
| AGCAACGGAGAATGAATTTG+AGG | + | chr5_2:67064640-67064659 | None:intergenic | 40.0% | |
| TGATGTAAATGTCCTACTCG+GGG | + | chr5_2:67064917-67064936 | None:intergenic | 40.0% | |
| CAAAGTCGCAAACAATGTTG+TGG | + | chr5_2:67064960-67064979 | None:intergenic | 40.0% | |
| ! | TTTGTAGGGCACTTTCAAAC+AGG | - | chr5_2:67064976-67064995 | Msa0783230:CDS | 40.0% |
| TACAAAGGCCGTAGATACAA+GGG | - | chr5_2:67065237-67065256 | Msa0783230:intron | 40.0% | |
| CAAACAGACCCTTGTATCTA+CGG | + | chr5_2:67065248-67065267 | None:intergenic | 40.0% | |
| ATACAAGGGTCTGTTTGGAT+TGG | - | chr5_2:67065251-67065270 | Msa0783230:intron | 40.0% | |
| TTTGTAGGACACTCTCAAAC+AGG | + | chr5_2:67065547-67065566 | None:intergenic | 40.0% | |
| !! | TGTTTGAGAGTGTCCTACAA+AGG | - | chr5_2:67065546-67065565 | Msa0783230:intron | 40.0% |
| GCCCGACTTCATCAAAATTA+GGG | + | chr5_2:67065590-67065609 | None:intergenic | 40.0% | |
| TGCCCGACTTCATCAAAATT+AGG | + | chr5_2:67065591-67065610 | None:intergenic | 40.0% | |
| ACAGCAAGGGATATACTTCA+GGG | - | chr5_2:67065647-67065666 | Msa0783230:intron | 40.0% | |
| TACACCCGAGTTATGTGAAT+AGG | + | chr5_2:67065775-67065794 | None:intergenic | 40.0% | |
| CATAACTCGGGTGTAAATGT+CGG | - | chr5_2:67065780-67065799 | Msa0783230:intron | 40.0% | |
| ATCCATCCCCTGAAATTACA+GGG | + | chr5_2:67065808-67065827 | None:intergenic | 40.0% | |
| AATCCATCCCCTGAAATTAC+AGG | + | chr5_2:67065809-67065828 | None:intergenic | 40.0% | |
| TGTAATTTCAGGGGATGGAT+TGG | - | chr5_2:67065808-67065827 | Msa0783230:intron | 40.0% | |
| AAAGATATTGTTGGTCGTCC+TGG | - | chr5_2:67066090-67066109 | Msa0783230:intron | 40.0% | |
| AACAAACCCGATAAGTAAGG+TGG | + | chr5_2:67066154-67066173 | None:intergenic | 40.0% | |
| !! | GGCAGTGGTTAATTTGTTAG+GGG | - | chr5_2:67066224-67066243 | Msa0783230:intron | 40.0% |
| !! | AGTGGTTAATTTGTTAGGGG+AGG | - | chr5_2:67066227-67066246 | Msa0783230:intron | 40.0% |
| !! | GTGGTTAATTTGTTAGGGGA+GGG | - | chr5_2:67066228-67066247 | Msa0783230:intron | 40.0% |
| !! | TGGTTAATTTGTTAGGGGAG+GGG | - | chr5_2:67066229-67066248 | Msa0783230:intron | 40.0% |
| ACACCGAAGTCGTGTTATAT+AGG | + | chr5_2:67066289-67066308 | None:intergenic | 40.0% | |
| GGTCAAAGTTGGAAAGGATT+TGG | - | chr5_2:67066657-67066676 | Msa0783230:intron | 40.0% | |
| CAAAGTTGGAAAGGATTTGG+TGG | - | chr5_2:67066660-67066679 | Msa0783230:intron | 40.0% | |
| TCAAGTAAATGAGTAGCCCA+AGG | + | chr5_2:67066826-67066845 | None:intergenic | 40.0% | |
| ! | CTTTTATCTCGCAGTTTAGG+TGG | - | chr5_2:67066870-67066889 | Msa0783230:intron | 40.0% |
| ! | ATTTTTGTGATGTGGAGACC+TGG | + | chr5_2:67067034-67067053 | None:intergenic | 40.0% |
| CACTGATGGAGAAATATCAG+TGG | - | chr5_2:67067088-67067107 | Msa0783230:intron | 40.0% | |
| AGTACCTGGAGATATGTTGT+GGG | - | chr5_2:67067166-67067185 | Msa0783230:intron | 40.0% | |
| TTGCAAATGATTGGGAGTTG+TGG | - | chr5_2:67067423-67067442 | Msa0783230:intron | 40.0% | |
| TGCAAATGATTGGGAGTTGT+GGG | - | chr5_2:67067424-67067443 | Msa0783230:intron | 40.0% | |
| AACATGTAATACCCGAAGTC+AGG | - | chr5_2:67067590-67067609 | Msa0783230:intron | 40.0% | |
| ACATGTAATACCCGAAGTCA+GGG | - | chr5_2:67067591-67067610 | Msa0783230:intron | 40.0% | |
| GGTGCAACAGCAAAATTTCA+GGG | + | chr5_2:67067707-67067726 | None:intergenic | 40.0% | |
| TGGTGCAACAGCAAAATTTC+AGG | + | chr5_2:67067708-67067727 | None:intergenic | 40.0% | |
| ATGAGACAAGACAGGTCTTT+GGG | + | chr5_2:67067739-67067758 | None:intergenic | 40.0% | |
| CAACAAAGATGAGACAAGAC+AGG | + | chr5_2:67067747-67067766 | None:intergenic | 40.0% | |
| GACACCTATTATAAGACAGG+AGG | - | chr5_2:67068086-67068105 | Msa0783230:intron | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | + | chr5_2:67068447-67068466 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr5_2:67068448-67068467 | None:intergenic | 40.0% | |
| CCTCATGAACTTAACTCAGT+TGG | + | chr5_2:67068481-67068500 | None:intergenic | 40.0% | |
| CCAACTGAGTTAAGTTCATG+AGG | - | chr5_2:67068478-67068497 | Msa0783230:intron | 40.0% | |
| GTGGACAAAGAAGACAAGAT+AGG | - | chr5_2:67069051-67069070 | Msa0783230:intron | 40.0% | |
| !! | CAAGATAGGATTAGCCAGTT+AGG | - | chr5_2:67069065-67069084 | Msa0783230:intron | 40.0% |
| GAATCTCGACTTAGCTGATA+TGG | - | chr5_2:67069140-67069159 | Msa0783230:intron | 40.0% | |
| GCTAACTTGAATAAGGCTGA+AGG | + | chr5_2:67069290-67069309 | None:intergenic | 40.0% | |
| !! | AGAGTTTGTTGTGCTTCTTG+TGG | - | chr5_2:67069323-67069342 | Msa0783230:intron | 40.0% |
| ! | GGTCTTTCGTTCTAAATCTC+AGG | + | chr5_2:67069475-67069494 | None:intergenic | 40.0% |
| ! | GCTGGGTCGATTTCAAATTT+AGG | + | chr5_2:67069874-67069893 | None:intergenic | 40.0% |
| TATTCACAAGGTAACACTGC+AGG | - | chr5_2:67069971-67069990 | Msa0783230:intron | 40.0% | |
| !! | TATGCAGATATGGATTGGGA+TGG | - | chr5_2:67070522-67070541 | Msa0783230:intron | 40.0% |
| GCAAGTTAAAACCTAAAGGG+TGG | - | chr5_2:67070636-67070655 | Msa0783230:intron | 40.0% | |
| !! | GGTTTTATGTTCCCAAGCAT+TGG | + | chr5_2:67070662-67070681 | None:intergenic | 40.0% |
| GGAACATAAAACCTAAAGGG+TGG | - | chr5_2:67070669-67070688 | Msa0783230:intron | 40.0% | |
| AACTTGAATTGCCACCCTTT+AGG | + | chr5_2:67070683-67070702 | None:intergenic | 40.0% | |
| ! | GATGTTTTCACTGCAGTATC+CGG | + | chr5_2:67070725-67070744 | None:intergenic | 40.0% |
| GGATGAAGAACATGAAGCTA+AGG | + | chr5_2:67070917-67070936 | None:intergenic | 40.0% | |
| CTTAGACACTCTTCACATGA+AGG | + | chr5_2:67070938-67070957 | None:intergenic | 40.0% | |
| ATATAACTTGGTCATTCCGC+AGG | + | chr5_2:67071110-67071129 | None:intergenic | 40.0% | |
| ATATCTCTCTCTCCTCGTAG+TGG | - | chr5_2:67064502-67064521 | Msa0783230:three_prime_UTR | 45.0% | |
| GAAGGAGCGAATTACCTTAG+TGG | + | chr5_2:67064718-67064737 | None:intergenic | 45.0% | |
| AGAGAGGAGAGAGAAGAAGA+AGG | + | chr5_2:67064736-67064755 | None:intergenic | 45.0% | |
| !! | AAGACACCGCGTTGTTTTCA+CGG | - | chr5_2:67064811-67064830 | Msa0783230:CDS | 45.0% |
| TTCCAACCGTGAAAACAACG+CGG | + | chr5_2:67064820-67064839 | None:intergenic | 45.0% | |
| GATGTAAATGTCCTACTCGG+GGG | + | chr5_2:67064916-67064935 | None:intergenic | 45.0% | |
| CTACAAAGGCCGTAGATACA+AGG | - | chr5_2:67065236-67065255 | Msa0783230:intron | 45.0% | |
| CGTAGATACAAGGGTCTGTT+TGG | - | chr5_2:67065246-67065265 | Msa0783230:intron | 45.0% | |
| TTTGATGAAGTCGGGCAACT+TGG | - | chr5_2:67065594-67065613 | Msa0783230:intron | 45.0% | |
| GACAGCAAGGGATATACTTC+AGG | - | chr5_2:67065646-67065665 | Msa0783230:intron | 45.0% | |
| TCCATCCCCTGAAATTACAG+GGG | + | chr5_2:67065807-67065826 | None:intergenic | 45.0% | |
| ATATTGTTGGTCGTCCTGGA+GGG | - | chr5_2:67066094-67066113 | Msa0783230:intron | 45.0% | |
| !! | GGTTAATTTGTTAGGGGAGG+GGG | - | chr5_2:67066230-67066249 | Msa0783230:intron | 45.0% |
| !! | TAACACGACTTCGGTGTCTT+AGG | - | chr5_2:67066292-67066311 | Msa0783230:intron | 45.0% |
| GGAGTAGCTCAGTGGTAATT+AGG | + | chr5_2:67066318-67066337 | None:intergenic | 45.0% | |
| TCAATTGGCAGAGTCACAGA+AGG | + | chr5_2:67066339-67066358 | None:intergenic | 45.0% | |
| ATTGTGCAGAGATTGAAGCC+AGG | - | chr5_2:67067013-67067032 | Msa0783230:intron | 45.0% | |
| GTACTTGCCTGAAACACTGA+TGG | - | chr5_2:67067074-67067093 | Msa0783230:intron | 45.0% | |
| GAGTACCTGGAGATATGTTG+TGG | - | chr5_2:67067165-67067184 | Msa0783230:intron | 45.0% | |
| GTTGTGGGAGGGTTTAGAAA+AGG | - | chr5_2:67067181-67067200 | Msa0783230:intron | 45.0% | |
| CATGTAATACCCGAAGTCAG+GGG | - | chr5_2:67067592-67067611 | Msa0783230:intron | 45.0% | |
| GATGAGACAAGACAGGTCTT+TGG | + | chr5_2:67067740-67067759 | None:intergenic | 45.0% | |
| ! | CATCTTTGTTGCTATTGGCG+TGG | - | chr5_2:67067756-67067775 | Msa0783230:intron | 45.0% |
| AAGTATGTGACTTCAGGCAG+TGG | + | chr5_2:67068814-67068833 | None:intergenic | 45.0% | |
| GAAGAGGCTCATATAAGCTC+TGG | - | chr5_2:67069173-67069192 | Msa0783230:intron | 45.0% | |
| GTCCAATAATTAGGGGTTGC+AGG | - | chr5_2:67069223-67069242 | Msa0783230:intron | 45.0% | |
| CTCCTGCAACCCCTAATTAT+TGG | + | chr5_2:67069228-67069247 | None:intergenic | 45.0% | |
| ! | ATGGGCGGTTTTGCTAGAAT+AGG | + | chr5_2:67069404-67069423 | None:intergenic | 45.0% |
| ! | GTTACCCATTGTGGTTGGTA+AGG | - | chr5_2:67069434-67069453 | Msa0783230:CDS | 45.0% |
| TACGCCTTACCAACCACAAT+GGG | + | chr5_2:67069441-67069460 | None:intergenic | 45.0% | |
| ATACGCCTTACCAACCACAA+TGG | + | chr5_2:67069442-67069461 | None:intergenic | 45.0% | |
| GTCAAACCACTAGCGTGATA+AGG | - | chr5_2:67069561-67069580 | Msa0783230:intron | 45.0% | |
| ACCACTAGCGTGATAAGGTT+TGG | - | chr5_2:67069566-67069585 | Msa0783230:intron | 45.0% | |
| ACCAAACCTTATCACGCTAG+TGG | + | chr5_2:67069570-67069589 | None:intergenic | 45.0% | |
| ! | ATCTTCAGCTATGACTGGCT+GGG | + | chr5_2:67069891-67069910 | None:intergenic | 45.0% |
| TATCTTCAGCTATGACTGGC+TGG | + | chr5_2:67069892-67069911 | None:intergenic | 45.0% | |
| AAGGTAACACTGCAGGATGT+AGG | - | chr5_2:67069978-67069997 | Msa0783230:intron | 45.0% | |
| ACTGTGAGTGGGAGGAAAAT+GGG | - | chr5_2:67070159-67070178 | Msa0783230:intron | 45.0% | |
| ! | CTGCTCCCTTTTGAACTTCT+TGG | + | chr5_2:67070570-67070589 | None:intergenic | 45.0% |
| AGGGAGCAGATGAAATTGCT+AGG | - | chr5_2:67070581-67070600 | Msa0783230:intron | 45.0% | |
| CCAAGCATTTGCCATCTTCT+AGG | + | chr5_2:67070617-67070636 | None:intergenic | 45.0% | |
| CCTAGAAGATGGCAAATGCT+TGG | - | chr5_2:67070614-67070633 | Msa0783230:intron | 45.0% | |
| GCATCATCGACACATATTGC+TGG | - | chr5_2:67070764-67070783 | Msa0783230:intron | 45.0% | |
| AGAACATGAAGCTAAGGGCA+AGG | + | chr5_2:67070911-67070930 | None:intergenic | 45.0% | |
| !!! | ATATTTGATTTTTTATTTTT+TGG | - | chr5_2:67065858-67065877 | Msa0783230:intron | 5.0% |
| !! | TTGTATTTATATTATAAAAA+AGG | + | chr5_2:67068030-67068049 | None:intergenic | 5.0% |
| !! | TCCTCGTAGTGGATGACTCA+AGG | - | chr5_2:67064513-67064532 | Msa0783230:three_prime_UTR | 50.0% |
| ACCTTGAGTCATCCACTACG+AGG | + | chr5_2:67064517-67064536 | None:intergenic | 50.0% | |
| TCCGTCGCTACTGCTTTCAT+CGG | - | chr5_2:67064851-67064870 | Msa0783230:CDS | 50.0% | |
| ACCGATGAAAGCAGTAGCGA+CGG | + | chr5_2:67064855-67064874 | None:intergenic | 50.0% | |
| ! | TACCAATTTTGCCCCCGAGT+AGG | - | chr5_2:67064902-67064921 | Msa0783230:CDS | 50.0% |
| !! | GAGAGTGTCCTACAAAGGCA+AGG | - | chr5_2:67065551-67065570 | Msa0783230:intron | 50.0% |
| CCACAAGTCCTTGCCTTTGT+AGG | + | chr5_2:67065562-67065581 | None:intergenic | 50.0% | |
| CCTACAAAGGCAAGGACTTG+TGG | - | chr5_2:67065559-67065578 | Msa0783230:intron | 50.0% | |
| TGTCGGACCCCTGTAATTTC+AGG | - | chr5_2:67065797-67065816 | Msa0783230:intron | 50.0% | |
| GTCGGACCCCTGTAATTTCA+GGG | - | chr5_2:67065798-67065817 | Msa0783230:intron | 50.0% | |
| TCGGACCCCTGTAATTTCAG+GGG | - | chr5_2:67065799-67065818 | Msa0783230:intron | 50.0% | |
| ACCCCTGTAATTTCAGGGGA+TGG | - | chr5_2:67065803-67065822 | Msa0783230:intron | 50.0% | |
| GATATTGTTGGTCGTCCTGG+AGG | - | chr5_2:67066093-67066112 | Msa0783230:intron | 50.0% | |
| TATTGTTGGTCGTCCTGGAG+GGG | - | chr5_2:67066095-67066114 | Msa0783230:intron | 50.0% | |
| GCCGGAACCACCTTACTTAT+CGG | - | chr5_2:67066144-67066163 | Msa0783230:intron | 50.0% | |
| CCCGATAAGTAAGGTGGTTC+CGG | + | chr5_2:67066148-67066167 | None:intergenic | 50.0% | |
| CCGGAACCACCTTACTTATC+GGG | - | chr5_2:67066145-67066164 | Msa0783230:intron | 50.0% | |
| AGGGGGATTCATTAGTCGGA+GGG | - | chr5_2:67066247-67066266 | Msa0783230:intron | 50.0% | |
| TCACAGAAGGAGTAGCTCAG+TGG | + | chr5_2:67066326-67066345 | None:intergenic | 50.0% | |
| ! | GAGAGTGACTTGCCGAAACA+TGG | - | chr5_2:67066561-67066580 | Msa0783230:intron | 50.0% |
| ACCTGGAGATATGTTGTGGG+AGG | - | chr5_2:67067169-67067188 | Msa0783230:intron | 50.0% | |
| CCTGGAGATATGTTGTGGGA+GGG | - | chr5_2:67067170-67067189 | Msa0783230:intron | 50.0% | |
| CAGGTCTTTGGGTCAGAACT+TGG | + | chr5_2:67067728-67067747 | None:intergenic | 50.0% | |
| AGCGGCATCAACTCAGTTTG+TGG | + | chr5_2:67067797-67067816 | None:intergenic | 50.0% | |
| CAAATCAAGGGTCACGTCAG+CGG | + | chr5_2:67067815-67067834 | None:intergenic | 50.0% | |
| AAGGTCCGGGGTTTAAATCC+CGG | + | chr5_2:67068435-67068454 | None:intergenic | 50.0% | |
| AAGTTTGCACTCCCTGACTC+AGG | - | chr5_2:67068776-67068795 | Msa0783230:intron | 50.0% | |
| AGTTTGCACTCCCTGACTCA+GGG | - | chr5_2:67068777-67068796 | Msa0783230:intron | 50.0% | |
| !! | TGGGTAACGATGGCTCTGAT+GGG | + | chr5_2:67069422-67069441 | None:intergenic | 50.0% |
| !! | ATGGGTAACGATGGCTCTGA+TGG | + | chr5_2:67069423-67069442 | None:intergenic | 50.0% |
| AGAGCCATCGTTACCCATTG+TGG | - | chr5_2:67069425-67069444 | Msa0783230:CDS | 50.0% | |
| CCAACCACAATGGGTAACGA+TGG | + | chr5_2:67069432-67069451 | None:intergenic | 50.0% | |
| CCATCGTTACCCATTGTGGT+TGG | - | chr5_2:67069429-67069448 | Msa0783230:CDS | 50.0% | |
| ATTTCCTCAGTGAGTGGCAG+TGG | + | chr5_2:67069672-67069691 | None:intergenic | 50.0% | |
| ATAGAAGGACTGTGAGTGGG+AGG | - | chr5_2:67070151-67070170 | Msa0783230:intron | 50.0% | |
| GACTGTGAGTGGGAGGAAAA+TGG | - | chr5_2:67070158-67070177 | Msa0783230:intron | 50.0% | |
| AGGAAAATGGGACCTCGTGT+GGG | - | chr5_2:67070171-67070190 | Msa0783230:intron | 50.0% | |
| !! | AGATATGGATTGGGATGGCG+AGG | - | chr5_2:67070527-67070546 | Msa0783230:intron | 50.0% |
| CTAAAGGGTGGCCAATGCTT+GGG | - | chr5_2:67070648-67070667 | Msa0783230:intron | 50.0% | |
| !! | CCGGCACTTTGGTTCTTCTA+GGG | + | chr5_2:67070706-67070725 | None:intergenic | 50.0% |
| CCCTAGAAGAACCAAAGTGC+CGG | - | chr5_2:67070703-67070722 | Msa0783230:intron | 50.0% | |
| !! | TCCGGCACTTTGGTTCTTCT+AGG | + | chr5_2:67070707-67070726 | None:intergenic | 50.0% |
| !! | CACCGCGTTGTTTTCACGGT+TGG | - | chr5_2:67064815-67064834 | Msa0783230:CDS | 55.0% |
| AGCAGTAGCGACGGATGCAA+TGG | + | chr5_2:67064846-67064865 | None:intergenic | 55.0% | |
| GTCCTACTCGGGGGCAAAAT+TGG | + | chr5_2:67064907-67064926 | None:intergenic | 55.0% | |
| AAGTAAGGTGGTTCCGGCAG+TGG | + | chr5_2:67066142-67066161 | None:intergenic | 55.0% | |
| GGGGAGGGGGATTCATTAGT+CGG | - | chr5_2:67066243-67066262 | Msa0783230:intron | 55.0% | |
| GAGGGGGATTCATTAGTCGG+AGG | - | chr5_2:67066246-67066265 | Msa0783230:intron | 55.0% | |
| CCCTCCCACAACATATCTCC+AGG | + | chr5_2:67067173-67067192 | None:intergenic | 55.0% | |
| GTAATACCCGAAGTCAGGGG+CGG | - | chr5_2:67067595-67067614 | Msa0783230:intron | 55.0% | |
| GTATCCAGGACCCTGAGTCA+GGG | + | chr5_2:67068790-67068809 | None:intergenic | 55.0% | |
| !! | GTAACGATGGCTCTGATGGG+CGG | + | chr5_2:67069419-67069438 | None:intergenic | 55.0% |
| GAGGAAAATGGGACCTCGTG+TGG | - | chr5_2:67070170-67070189 | Msa0783230:intron | 55.0% | |
| AAAATGGGACCTCGTGTGGG+AGG | - | chr5_2:67070174-67070193 | Msa0783230:intron | 55.0% | |
| AAATGGGACCTCGTGTGGGA+GGG | - | chr5_2:67070175-67070194 | Msa0783230:intron | 55.0% | |
| !! | TATGGATTGGGATGGCGAGG+TGG | - | chr5_2:67070530-67070549 | Msa0783230:intron | 55.0% |
| !! | CCAAGCATTGGCCACCCTTT+AGG | + | chr5_2:67070650-67070669 | None:intergenic | 55.0% |
| CCTAAAGGGTGGCCAATGCT+TGG | - | chr5_2:67070647-67070666 | Msa0783230:intron | 55.0% | |
| CACTGCAGTATCCGGCACTT+TGG | + | chr5_2:67070717-67070736 | None:intergenic | 55.0% | |
| GCAGGAATACTGACCCCTCC+AGG | + | chr5_2:67066111-67066130 | None:intergenic | 60.0% | |
| TGCTCACCCTCACATGCAGC+TGG | + | chr5_2:67067623-67067642 | None:intergenic | 60.0% | |
| CGTATCCAGGACCCTGAGTC+AGG | + | chr5_2:67068791-67068810 | None:intergenic | 60.0% | |
| CTTCAGGCAGTGGCGTATCC+AGG | + | chr5_2:67068804-67068823 | None:intergenic | 60.0% | |
| CCTCAGTGAGTGGCAGTGGT+TGG | + | chr5_2:67069668-67069687 | None:intergenic | 60.0% | |
| CCAACCACTGCCACTCACTG+AGG | - | chr5_2:67069665-67069684 | Msa0783230:CDS | 60.0% | |
| AATGGGACCTCGTGTGGGAG+GGG | - | chr5_2:67070176-67070195 | Msa0783230:intron | 60.0% | |
| AGCTAAGGGCAAGGAGCAGC+AGG | + | chr5_2:67070902-67070921 | None:intergenic | 60.0% | |
| CCTGCTTGTGCAGCCACTGC+CGG | - | chr5_2:67066126-67066145 | Msa0783230:intron | 65.0% | |
| GCGGAGCCAGCTGCATGTGA+GGG | - | chr5_2:67067614-67067633 | Msa0783230:intron | 65.0% | |
| CACTCCCTGACTCAGGGTCC+TGG | - | chr5_2:67068783-67068802 | Msa0783230:intron | 65.0% | |
| ATGGGACCTCGTGTGGGAGG+GGG | - | chr5_2:67070177-67070196 | Msa0783230:intron | 65.0% | |
| TGGGATGGCGAGGTGGAAGC+TGG | - | chr5_2:67070537-67070556 | Msa0783230:intron | 65.0% | |
| CCGGCAGTGGCTGCACAAGC+AGG | + | chr5_2:67066129-67066148 | None:intergenic | 70.0% | |
| CTGGCTCCGCCCCTGACTTC+GGG | + | chr5_2:67067604-67067623 | None:intergenic | 70.0% | |
| ! | GCTGGCTCCGCCCCTGACTT+CGG | + | chr5_2:67067605-67067624 | None:intergenic | 70.0% |
| GGCGGAGCCAGCTGCATGTG+AGG | - | chr5_2:67067613-67067632 | Msa0783230:intron | 70.0% | |
| GACCTCGTGTGGGAGGGGGT+AGG | - | chr5_2:67070181-67070200 | Msa0783230:intron | 70.0% | |
| GACCTACCCCCTCCCACACG+AGG | + | chr5_2:67070186-67070205 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 67064430 | 67071149 | 67064430 | ID=Msa0783230;Name=Msa0783230 |
| chr5_2 | mRNA | 67064430 | 67071149 | 67064430 | ID=Msa0783230-mRNA-1;Parent=Msa0783230;Name=Msa0783230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=176|1|1|1|1|1|5|350|212 |
| chr5_2 | exon | 67064430 | 67065050 | 67064430 | ID=Msa0783230-mRNA-1:exon:20132;Parent=Msa0783230-mRNA-1 |
| chr5_2 | exon | 67069413 | 67069525 | 67069413 | ID=Msa0783230-mRNA-1:exon:20131;Parent=Msa0783230-mRNA-1 |
| chr5_2 | exon | 67069621 | 67069685 | 67069621 | ID=Msa0783230-mRNA-1:exon:20130;Parent=Msa0783230-mRNA-1 |
| chr5_2 | exon | 67070707 | 67070779 | 67070707 | ID=Msa0783230-mRNA-1:exon:20129;Parent=Msa0783230-mRNA-1 |
| chr5_2 | exon | 67070857 | 67071149 | 67070857 | ID=Msa0783230-mRNA-1:exon:20128;Parent=Msa0783230-mRNA-1 |
| chr5_2 | five_prime_UTR | 67070974 | 67071149 | 67070974 | ID=Msa0783230-mRNA-1:five_prime_utr;Parent=Msa0783230-mRNA-1 |
| chr5_2 | CDS | 67070857 | 67070973 | 67070857 | ID=Msa0783230-mRNA-1:cds;Parent=Msa0783230-mRNA-1 |
| chr5_2 | CDS | 67070707 | 67070779 | 67070707 | ID=Msa0783230-mRNA-1:cds;Parent=Msa0783230-mRNA-1 |
| chr5_2 | CDS | 67069621 | 67069685 | 67069621 | ID=Msa0783230-mRNA-1:cds;Parent=Msa0783230-mRNA-1 |
| chr5_2 | CDS | 67069413 | 67069525 | 67069413 | ID=Msa0783230-mRNA-1:cds;Parent=Msa0783230-mRNA-1 |
| chr5_2 | CDS | 67064780 | 67065050 | 67064780 | ID=Msa0783230-mRNA-1:cds;Parent=Msa0783230-mRNA-1 |
| chr5_2 | three_prime_UTR | 67064430 | 67064779 | 67064430 | ID=Msa0783230-mRNA-1:three_prime_utr;Parent=Msa0783230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
