Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795160 | XP_003611158.1 | 72.000 | 150 | 22 | 2 | 1 | 130 | 1 | 150 | 1.96e-61 | 206 |
Msa0795160 | XP_003611158.1 | 88.991 | 218 | 22 | 2 | 135 | 352 | 14 | 229 | 6.93e-136 | 396 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795160 | sp|Q9LN86|DRE1F_ARATH | 48.387 | 217 | 79 | 6 | 152 | 350 | 6 | 207 | 1.10e-53 | 179 |
Msa0795160 | sp|Q9LN86|DRE1F_ARATH | 64.545 | 110 | 26 | 1 | 28 | 124 | 5 | 114 | 2.14e-41 | 147 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795160 | G7KDI1 | 72.000 | 150 | 22 | 2 | 1 | 130 | 1 | 150 | 9.36e-62 | 206 |
Msa0795160 | G7KDI1 | 88.991 | 218 | 22 | 2 | 135 | 352 | 14 | 229 | 3.31e-136 | 396 |
Gene ID | Type | Classification |
---|---|---|
Msa0795160 | TF | AP2/ERF-ERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0795160 | Msa0795590 | 0.967340 | 3.827968e-127 | -8.615850e-47 |
Msa0795160 | Msa0832890 | 0.885503 | 7.685844e-72 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795160 | MtrunA17_Chr5g0398091 | 88.991 | 218 | 22 | 2 | 135 | 352 | 14 | 229 | 6.37e-140 | 396 |
Msa0795160 | MtrunA17_Chr5g0398091 | 72.000 | 150 | 22 | 2 | 1 | 130 | 1 | 150 | 1.80e-65 | 206 |
Msa0795160 | MtrunA17_Chr5g0398061 | 90.099 | 202 | 18 | 2 | 152 | 352 | 24 | 224 | 1.49e-131 | 375 |
Msa0795160 | MtrunA17_Chr5g0398061 | 72.667 | 150 | 16 | 3 | 1 | 130 | 1 | 145 | 8.46e-57 | 184 |
Msa0795160 | MtrunA17_Chr5g0398081 | 85.784 | 204 | 26 | 3 | 151 | 352 | 24 | 226 | 5.29e-123 | 353 |
Msa0795160 | MtrunA17_Chr5g0398081 | 68.254 | 126 | 21 | 1 | 28 | 134 | 24 | 149 | 1.44e-51 | 171 |
Msa0795160 | MtrunA17_Chr6g0473961 | 46.798 | 203 | 91 | 4 | 150 | 350 | 28 | 215 | 1.22e-51 | 171 |
Msa0795160 | MtrunA17_Chr6g0473961 | 54.128 | 109 | 37 | 1 | 27 | 122 | 28 | 136 | 1.09e-32 | 121 |
Msa0795160 | MtrunA17_Chr1g0203861 | 47.465 | 217 | 93 | 5 | 138 | 352 | 8 | 205 | 1.75e-51 | 170 |
Msa0795160 | MtrunA17_Chr1g0203861 | 51.587 | 126 | 40 | 2 | 3 | 115 | 2 | 119 | 1.84e-34 | 125 |
Msa0795160 | MtrunA17_Chr6g0474001 | 47.739 | 199 | 88 | 4 | 146 | 343 | 24 | 207 | 2.12e-51 | 172 |
Msa0795160 | MtrunA17_Chr6g0474001 | 55.455 | 110 | 36 | 1 | 26 | 122 | 27 | 136 | 4.17e-34 | 126 |
Msa0795160 | MtrunA17_Chr4g0057231 | 74.016 | 127 | 23 | 3 | 135 | 258 | 3 | 122 | 2.85e-51 | 167 |
Msa0795160 | MtrunA17_Chr4g0057231 | 63.636 | 110 | 24 | 2 | 22 | 115 | 13 | 122 | 2.20e-37 | 131 |
Msa0795160 | MtrunA17_Chr6g0473981 | 64.754 | 122 | 36 | 1 | 146 | 267 | 24 | 138 | 4.44e-50 | 167 |
Msa0795160 | MtrunA17_Chr6g0473981 | 56.881 | 109 | 34 | 1 | 27 | 122 | 28 | 136 | 2.76e-33 | 124 |
Msa0795160 | MtrunA17_Chr6g0473971 | 61.940 | 134 | 39 | 2 | 134 | 267 | 17 | 138 | 6.21e-49 | 164 |
Msa0795160 | MtrunA17_Chr6g0473971 | 50.862 | 116 | 44 | 1 | 6 | 108 | 7 | 122 | 6.99e-33 | 122 |
Msa0795160 | MtrunA17_Chr6g0473741 | 48.558 | 208 | 89 | 6 | 148 | 352 | 38 | 230 | 1.03e-48 | 163 |
Msa0795160 | MtrunA17_Chr6g0473741 | 53.226 | 124 | 38 | 2 | 19 | 122 | 25 | 148 | 8.21e-33 | 122 |
Msa0795160 | MtrunA17_Chr6g0473931 | 46.445 | 211 | 92 | 5 | 146 | 350 | 3 | 198 | 1.35e-47 | 159 |
Msa0795160 | MtrunA17_Chr6g0473931 | 58.095 | 105 | 31 | 1 | 31 | 122 | 11 | 115 | 6.83e-31 | 116 |
Msa0795160 | MtrunA17_Chr6g0473781 | 65.789 | 114 | 32 | 1 | 154 | 267 | 35 | 141 | 2.03e-47 | 160 |
Msa0795160 | MtrunA17_Chr6g0473781 | 52.846 | 123 | 38 | 2 | 20 | 122 | 17 | 139 | 3.37e-33 | 123 |
Msa0795160 | MtrunA17_Chr6g0473881 | 43.836 | 219 | 96 | 5 | 134 | 343 | 62 | 262 | 2.18e-46 | 160 |
Msa0795160 | MtrunA17_Chr6g0473881 | 52.000 | 125 | 40 | 2 | 11 | 115 | 61 | 185 | 1.50e-33 | 126 |
Msa0795160 | MtrunA17_Chr6g0473941 | 63.115 | 122 | 38 | 1 | 146 | 267 | 3 | 117 | 2.09e-43 | 149 |
Msa0795160 | MtrunA17_Chr6g0473941 | 57.143 | 98 | 29 | 1 | 31 | 115 | 11 | 108 | 2.06e-28 | 109 |
Msa0795160 | MtrunA17_Chr6g0473771 | 59.633 | 109 | 37 | 1 | 148 | 256 | 15 | 116 | 1.22e-37 | 131 |
Msa0795160 | MtrunA17_Chr6g0473771 | 51.923 | 104 | 37 | 1 | 17 | 107 | 7 | 110 | 4.64e-26 | 100 |
Msa0795160 | MtrunA17_Chr6g0473861 | 62.500 | 120 | 38 | 1 | 148 | 267 | 35 | 147 | 1.76e-37 | 135 |
Msa0795160 | MtrunA17_Chr6g0473861 | 55.856 | 111 | 36 | 1 | 25 | 122 | 35 | 145 | 2.39e-24 | 100 |
Msa0795160 | MtrunA17_Chr6g0473791 | 68.831 | 77 | 17 | 1 | 154 | 230 | 35 | 104 | 2.08e-30 | 113 |
Msa0795160 | MtrunA17_Chr6g0473791 | 54.795 | 73 | 20 | 1 | 28 | 87 | 32 | 104 | 1.39e-18 | 81.6 |
Msa0795160 | MtrunA17_Chr2g0321071 | 61.458 | 96 | 30 | 3 | 170 | 264 | 41 | 130 | 1.93e-28 | 110 |
Msa0795160 | MtrunA17_Chr2g0321071 | 48.889 | 90 | 31 | 1 | 47 | 121 | 41 | 130 | 1.85e-18 | 83.2 |
Msa0795160 | MtrunA17_Chr5g0399441 | 49.194 | 124 | 49 | 2 | 172 | 288 | 24 | 140 | 3.20e-27 | 105 |
Msa0795160 | MtrunA17_Chr5g0399441 | 43.878 | 98 | 42 | 1 | 49 | 133 | 24 | 121 | 4.61e-15 | 72.8 |
Msa0795160 | MtrunA17_Chr7g0265851 | 60.465 | 86 | 27 | 1 | 172 | 257 | 20 | 98 | 5.60e-26 | 103 |
Msa0795160 | MtrunA17_Chr7g0265851 | 54.430 | 79 | 23 | 1 | 49 | 114 | 20 | 98 | 6.73e-18 | 81.3 |
Msa0795160 | MtrunA17_Chr3g0140161 | 55.208 | 96 | 36 | 1 | 171 | 266 | 38 | 126 | 8.48e-26 | 102 |
Msa0795160 | MtrunA17_Chr3g0140161 | 46.067 | 89 | 35 | 1 | 48 | 123 | 38 | 126 | 4.51e-16 | 75.5 |
Msa0795160 | MtrunA17_Chr8g0334801 | 54.082 | 98 | 38 | 1 | 160 | 257 | 36 | 126 | 3.31e-25 | 101 |
Msa0795160 | MtrunA17_Chr8g0334801 | 52.174 | 69 | 20 | 1 | 50 | 105 | 49 | 117 | 4.46e-14 | 70.5 |
Msa0795160 | MtrunA17_Chr7g0275841 | 41.176 | 136 | 64 | 3 | 155 | 287 | 13 | 135 | 6.50e-24 | 96.7 |
Msa0795160 | MtrunA17_Chr7g0275841 | 46.053 | 76 | 28 | 1 | 48 | 110 | 23 | 98 | 1.34e-13 | 68.2 |
Msa0795160 | MtrunA17_Chr8g0390091 | 47.692 | 130 | 55 | 4 | 145 | 274 | 11 | 127 | 8.16e-24 | 98.2 |
Msa0795160 | MtrunA17_Chr8g0390091 | 44.037 | 109 | 43 | 2 | 13 | 108 | 2 | 105 | 1.58e-16 | 77.8 |
Msa0795160 | MtrunA17_Chr7g0232261 | 53.061 | 98 | 39 | 1 | 160 | 257 | 45 | 135 | 2.96e-23 | 96.7 |
Msa0795160 | MtrunA17_Chr7g0232261 | 51.282 | 78 | 23 | 2 | 35 | 99 | 45 | 120 | 5.53e-14 | 70.9 |
Msa0795160 | MtrunA17_Chr2g0331231 | 52.525 | 99 | 34 | 2 | 156 | 248 | 15 | 106 | 4.09e-23 | 95.5 |
Msa0795160 | MtrunA17_Chr2g0331231 | 44.565 | 92 | 32 | 2 | 33 | 105 | 15 | 106 | 2.33e-14 | 71.2 |
Msa0795160 | MtrunA17_Chr8g0340311 | 50.000 | 106 | 46 | 1 | 172 | 277 | 43 | 141 | 1.41e-22 | 94.0 |
Msa0795160 | MtrunA17_Chr8g0340311 | 51.667 | 60 | 16 | 1 | 49 | 95 | 43 | 102 | 7.17e-13 | 67.0 |
Msa0795160 | MtrunA17_Chr6g0486701 | 56.250 | 96 | 35 | 1 | 173 | 268 | 41 | 129 | 4.37e-22 | 93.2 |
Msa0795160 | MtrunA17_Chr6g0486701 | 47.191 | 89 | 34 | 1 | 50 | 125 | 41 | 129 | 7.58e-13 | 67.0 |
Msa0795160 | MtrunA17_Chr4g0057241 | 54.651 | 86 | 31 | 2 | 172 | 257 | 11 | 88 | 2.01e-21 | 89.7 |
Msa0795160 | MtrunA17_Chr4g0057241 | 47.436 | 78 | 29 | 1 | 49 | 114 | 11 | 88 | 4.87e-14 | 69.3 |
Msa0795160 | MtrunA17_Chr8g0346741 | 50.000 | 94 | 37 | 2 | 154 | 247 | 20 | 103 | 8.36e-21 | 88.6 |
Msa0795160 | MtrunA17_Chr8g0346741 | 42.391 | 92 | 34 | 3 | 22 | 97 | 8 | 96 | 3.63e-13 | 67.0 |
Msa0795160 | MtrunA17_Chr4g0055951 | 62.319 | 69 | 19 | 1 | 174 | 242 | 72 | 133 | 6.23e-20 | 87.8 |
Msa0795160 | MtrunA17_Chr4g0055951 | 51.613 | 62 | 17 | 1 | 51 | 99 | 72 | 133 | 1.66e-11 | 63.9 |
Msa0795160 | MtrunA17_Chr6g0486711 | 43.284 | 134 | 59 | 2 | 143 | 266 | 6 | 132 | 2.31e-17 | 80.5 |
Msa0795160 | MtrunA17_Chr1g0146191 | 67.164 | 67 | 15 | 1 | 172 | 238 | 43 | 102 | 1.60e-15 | 75.5 |
Msa0795160 | MtrunA17_Chr4g0017851 | 39.286 | 112 | 59 | 2 | 155 | 264 | 95 | 199 | 3.15e-15 | 75.5 |
Msa0795160 | MtrunA17_Chr5g0396191 | 52.809 | 89 | 35 | 1 | 176 | 264 | 11 | 92 | 2.35e-14 | 70.9 |
Msa0795160 | MtrunA17_Chr3g0134161 | 44.318 | 88 | 40 | 2 | 176 | 263 | 45 | 123 | 9.06e-14 | 68.6 |
Msa0795160 | MtrunA17_Chr1g0150631 | 49.254 | 67 | 27 | 1 | 175 | 241 | 37 | 96 | 1.06e-13 | 69.7 |
Msa0795160 | MtrunA17_Chr5g0396181 | 35.028 | 177 | 93 | 6 | 176 | 347 | 21 | 180 | 1.80e-13 | 68.6 |
Msa0795160 | MtrunA17_Chr1g0153151 | 52.308 | 65 | 24 | 1 | 176 | 240 | 44 | 101 | 2.66e-13 | 67.8 |
Msa0795160 | MtrunA17_Chr1g0196781 | 47.059 | 68 | 29 | 1 | 171 | 238 | 147 | 207 | 6.01e-13 | 68.9 |
Msa0795160 | MtrunA17_Chr5g0401871 | 52.381 | 63 | 23 | 1 | 176 | 238 | 25 | 80 | 8.28e-13 | 66.2 |
Msa0795160 | MtrunA17_Chr5g0437671 | 53.846 | 65 | 23 | 1 | 176 | 240 | 85 | 142 | 1.29e-12 | 68.6 |
Msa0795160 | MtrunA17_Chr1g0150691 | 47.761 | 67 | 28 | 1 | 175 | 241 | 21 | 80 | 1.39e-12 | 66.2 |
Msa0795160 | MtrunA17_Chr1g0150671 | 43.836 | 73 | 34 | 1 | 175 | 247 | 45 | 110 | 1.42e-12 | 67.4 |
Msa0795160 | MtrunA17_Chr3g0115631 | 46.835 | 79 | 33 | 2 | 160 | 238 | 136 | 205 | 1.78e-12 | 67.8 |
Msa0795160 | MtrunA17_Chr5g0396301 | 52.239 | 67 | 23 | 2 | 176 | 240 | 18 | 77 | 2.05e-12 | 64.7 |
Msa0795160 | MtrunA17_Chr1g0150661 | 43.836 | 73 | 34 | 1 | 175 | 247 | 34 | 99 | 2.45e-12 | 65.9 |
Msa0795160 | MtrunA17_Chr8g0382491 | 36.036 | 111 | 57 | 3 | 175 | 280 | 112 | 213 | 3.24e-12 | 66.2 |
Msa0795160 | MtrunA17_Chr2g0301191 | 28.169 | 213 | 100 | 7 | 175 | 350 | 18 | 214 | 3.49e-12 | 65.1 |
Msa0795160 | MtrunA17_Chr2g0324131 | 48.485 | 66 | 27 | 1 | 175 | 240 | 217 | 275 | 3.95e-12 | 67.0 |
Msa0795160 | MtrunA17_Chr2g0295421 | 35.514 | 107 | 58 | 2 | 135 | 241 | 59 | 154 | 6.38e-12 | 65.1 |
Msa0795160 | MtrunA17_Chr7g0225131 | 46.269 | 67 | 26 | 2 | 175 | 241 | 28 | 84 | 1.00e-11 | 60.8 |
Msa0795160 | MtrunA17_Chr7g0221501 | 36.697 | 109 | 57 | 3 | 134 | 240 | 10 | 108 | 1.01e-11 | 63.2 |
Msa0795160 | MtrunA17_Chr1g0179161 | 40.964 | 83 | 22 | 1 | 160 | 242 | 3 | 58 | 1.23e-11 | 62.8 |
Msa0795160 | MtrunA17_Chr3g0136551 | 39.785 | 93 | 45 | 3 | 176 | 264 | 65 | 150 | 1.71e-11 | 63.9 |
Msa0795160 | MtrunA17_Chr2g0301171 | 38.889 | 90 | 48 | 1 | 175 | 264 | 18 | 100 | 2.11e-11 | 62.8 |
Msa0795160 | MtrunA17_Chr5g0425561 | 48.485 | 66 | 27 | 1 | 175 | 240 | 172 | 230 | 2.26e-11 | 64.3 |
Msa0795160 | MtrunA17_Chr2g0334031 | 37.755 | 98 | 51 | 2 | 145 | 242 | 89 | 176 | 2.76e-11 | 64.3 |
Msa0795160 | MtrunA17_Chr7g0221471 | 46.377 | 69 | 30 | 1 | 172 | 240 | 47 | 108 | 3.11e-11 | 61.6 |
Msa0795160 | MtrunA17_Chr4g0046161 | 41.975 | 81 | 41 | 1 | 158 | 238 | 39 | 113 | 3.38e-11 | 60.1 |
Msa0795160 | MtrunA17_Chr8g0335331 | 50.794 | 63 | 25 | 1 | 176 | 238 | 125 | 181 | 5.32e-11 | 61.6 |
Msa0795160 | MtrunA17_Chr2g0301181 | 38.889 | 90 | 48 | 1 | 175 | 264 | 18 | 100 | 6.63e-11 | 61.6 |
Msa0795160 | MtrunA17_Chr7g0250721 | 49.206 | 63 | 26 | 1 | 176 | 238 | 61 | 117 | 9.67e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795160 | AT1G12610.1 | 48.387 | 217 | 79 | 6 | 152 | 350 | 6 | 207 | 1.12e-54 | 179 |
Msa0795160 | AT1G12610.1 | 64.545 | 110 | 26 | 1 | 28 | 124 | 5 | 114 | 2.18e-42 | 147 |
Msa0795160 | AT1G63030.2 | 47.291 | 203 | 76 | 5 | 152 | 350 | 6 | 181 | 1.08e-53 | 175 |
Msa0795160 | AT1G63030.2 | 58.182 | 110 | 33 | 1 | 28 | 124 | 5 | 114 | 2.69e-38 | 135 |
Msa0795160 | AT1G63030.1 | 47.291 | 203 | 76 | 5 | 152 | 350 | 6 | 181 | 1.08e-53 | 175 |
Msa0795160 | AT1G63030.1 | 58.182 | 110 | 33 | 1 | 28 | 124 | 5 | 114 | 2.69e-38 | 135 |
Msa0795160 | AT4G25470.1 | 44.843 | 223 | 96 | 6 | 137 | 350 | 12 | 216 | 1.50e-50 | 168 |
Msa0795160 | AT4G25470.1 | 50.000 | 132 | 51 | 2 | 5 | 121 | 1 | 132 | 5.90e-32 | 119 |
Msa0795160 | AT5G51990.1 | 62.590 | 139 | 45 | 1 | 132 | 270 | 10 | 141 | 2.48e-50 | 168 |
Msa0795160 | AT5G51990.1 | 49.645 | 141 | 57 | 2 | 1 | 127 | 1 | 141 | 2.25e-33 | 124 |
Msa0795160 | AT4G25480.1 | 50.242 | 207 | 74 | 9 | 154 | 350 | 29 | 216 | 1.59e-47 | 160 |
Msa0795160 | AT4G25480.1 | 51.587 | 126 | 46 | 2 | 5 | 115 | 1 | 126 | 6.62e-32 | 119 |
Msa0795160 | AT4G25490.1 | 48.039 | 204 | 83 | 7 | 154 | 350 | 26 | 213 | 9.71e-44 | 150 |
Msa0795160 | AT4G25490.1 | 49.194 | 124 | 49 | 2 | 5 | 115 | 1 | 123 | 3.12e-29 | 112 |
Msa0795160 | AT5G25810.1 | 56.842 | 95 | 34 | 1 | 172 | 266 | 32 | 119 | 1.24e-27 | 108 |
Msa0795160 | AT5G25810.1 | 47.059 | 102 | 34 | 2 | 35 | 123 | 25 | 119 | 6.55e-18 | 82.0 |
Msa0795160 | AT5G11590.1 | 48.387 | 124 | 56 | 2 | 143 | 266 | 19 | 134 | 4.46e-26 | 104 |
Msa0795160 | AT5G11590.1 | 37.600 | 125 | 65 | 1 | 12 | 123 | 10 | 134 | 3.01e-16 | 77.4 |
Msa0795160 | AT2G44940.1 | 56.989 | 93 | 33 | 1 | 172 | 264 | 96 | 181 | 1.93e-23 | 99.0 |
Msa0795160 | AT2G44940.1 | 47.674 | 86 | 32 | 1 | 49 | 121 | 96 | 181 | 8.54e-14 | 71.6 |
Msa0795160 | AT2G35700.1 | 42.484 | 153 | 59 | 4 | 171 | 314 | 40 | 172 | 1.30e-22 | 94.4 |
Msa0795160 | AT2G35700.1 | 41.322 | 121 | 54 | 2 | 48 | 155 | 40 | 156 | 4.55e-14 | 70.5 |
Msa0795160 | AT4G32800.1 | 51.579 | 95 | 39 | 1 | 172 | 266 | 15 | 102 | 3.79e-22 | 93.6 |
Msa0795160 | AT4G32800.1 | 42.045 | 88 | 38 | 1 | 49 | 123 | 15 | 102 | 1.06e-12 | 67.0 |
Msa0795160 | AT4G16750.1 | 37.931 | 174 | 80 | 3 | 146 | 314 | 5 | 155 | 1.35e-20 | 88.2 |
Msa0795160 | AT4G16750.1 | 45.000 | 80 | 31 | 1 | 48 | 114 | 35 | 114 | 2.69e-12 | 65.1 |
Msa0795160 | AT2G36450.1 | 60.000 | 80 | 24 | 2 | 172 | 250 | 11 | 83 | 1.77e-20 | 88.2 |
Msa0795160 | AT2G36450.1 | 50.685 | 73 | 22 | 1 | 49 | 107 | 11 | 83 | 2.50e-13 | 68.2 |
Msa0795160 | AT1G71450.1 | 34.483 | 174 | 90 | 3 | 175 | 348 | 23 | 172 | 1.91e-20 | 87.8 |
Msa0795160 | AT1G01250.1 | 50.575 | 87 | 36 | 1 | 171 | 257 | 40 | 119 | 3.52e-20 | 87.4 |
Msa0795160 | AT1G01250.1 | 47.619 | 63 | 20 | 1 | 48 | 97 | 40 | 102 | 4.59e-12 | 64.7 |
Msa0795160 | AT3G16280.1 | 52.326 | 86 | 34 | 1 | 172 | 257 | 57 | 135 | 7.03e-20 | 87.8 |
Msa0795160 | AT3G16280.1 | 50.000 | 64 | 19 | 1 | 49 | 99 | 57 | 120 | 2.01e-11 | 63.5 |
Msa0795160 | AT3G16280.2 | 52.326 | 86 | 34 | 1 | 172 | 257 | 75 | 153 | 9.47e-20 | 87.8 |
Msa0795160 | AT3G16280.2 | 50.000 | 64 | 19 | 1 | 49 | 99 | 75 | 138 | 2.51e-11 | 63.5 |
Msa0795160 | AT3G60490.1 | 53.846 | 91 | 34 | 2 | 161 | 250 | 55 | 138 | 6.57e-19 | 85.5 |
Msa0795160 | AT2G25820.1 | 55.422 | 83 | 30 | 1 | 175 | 257 | 25 | 100 | 1.84e-18 | 83.6 |
Msa0795160 | AT5G52020.1 | 37.912 | 182 | 80 | 6 | 172 | 334 | 61 | 228 | 2.53e-15 | 74.7 |
Msa0795160 | AT1G74930.1 | 41.304 | 92 | 47 | 1 | 176 | 267 | 21 | 105 | 4.43e-15 | 73.6 |
Msa0795160 | AT4G13620.1 | 40.196 | 102 | 53 | 2 | 140 | 240 | 195 | 289 | 4.83e-15 | 75.9 |
Msa0795160 | AT1G46768.3 | 54.286 | 70 | 24 | 2 | 171 | 240 | 27 | 88 | 6.06e-15 | 71.6 |
Msa0795160 | AT1G46768.1 | 54.286 | 70 | 24 | 2 | 171 | 240 | 27 | 88 | 6.30e-15 | 72.0 |
Msa0795160 | AT1G46768.2 | 54.286 | 70 | 24 | 2 | 171 | 240 | 27 | 88 | 6.30e-15 | 72.0 |
Msa0795160 | AT1G19210.1 | 43.820 | 89 | 43 | 1 | 176 | 264 | 12 | 93 | 1.10e-14 | 72.0 |
Msa0795160 | AT2G23340.1 | 43.564 | 101 | 43 | 3 | 176 | 269 | 28 | 121 | 2.30e-14 | 70.9 |
Msa0795160 | AT1G21910.1 | 53.731 | 67 | 24 | 1 | 176 | 242 | 50 | 109 | 3.82e-14 | 71.6 |
Msa0795160 | AT4G36900.1 | 52.239 | 67 | 25 | 1 | 172 | 238 | 26 | 85 | 4.77e-14 | 70.5 |
Msa0795160 | AT3G50260.1 | 41.176 | 102 | 51 | 3 | 169 | 269 | 14 | 107 | 5.37e-14 | 69.3 |
Msa0795160 | AT1G22190.1 | 46.250 | 80 | 34 | 2 | 161 | 240 | 70 | 140 | 2.26e-13 | 69.7 |
Msa0795160 | AT5G67190.1 | 50.794 | 63 | 24 | 1 | 176 | 238 | 21 | 76 | 3.04e-13 | 67.8 |
Msa0795160 | AT4G39780.1 | 48.529 | 68 | 28 | 1 | 171 | 238 | 88 | 148 | 3.65e-13 | 69.3 |
Msa0795160 | AT1G77200.1 | 53.571 | 84 | 32 | 1 | 174 | 257 | 41 | 117 | 3.80e-13 | 68.9 |
Msa0795160 | AT2G22200.1 | 50.000 | 64 | 25 | 1 | 175 | 238 | 70 | 126 | 9.50e-13 | 67.8 |
Msa0795160 | AT4G06746.1 | 46.377 | 69 | 30 | 1 | 176 | 244 | 36 | 97 | 1.42e-12 | 65.1 |
Msa0795160 | AT2G47520.1 | 38.542 | 96 | 48 | 2 | 147 | 238 | 17 | 105 | 1.66e-12 | 65.5 |
Msa0795160 | AT1G36060.1 | 51.562 | 64 | 24 | 1 | 175 | 238 | 142 | 198 | 1.85e-12 | 67.8 |
Msa0795160 | AT4G31060.1 | 47.619 | 63 | 26 | 1 | 176 | 238 | 27 | 82 | 1.96e-12 | 65.9 |
Msa0795160 | AT2G44840.1 | 36.885 | 122 | 67 | 2 | 117 | 238 | 37 | 148 | 4.18e-12 | 65.5 |
Msa0795160 | AT1G33760.1 | 46.739 | 92 | 42 | 1 | 176 | 267 | 20 | 104 | 4.88e-12 | 64.3 |
Msa0795160 | AT5G43410.1 | 44.156 | 77 | 35 | 2 | 162 | 238 | 3 | 71 | 7.87e-12 | 62.4 |
Msa0795160 | AT5G65130.1 | 46.970 | 66 | 28 | 1 | 175 | 240 | 110 | 168 | 1.02e-11 | 65.1 |
Msa0795160 | AT5G65130.2 | 46.970 | 66 | 28 | 1 | 175 | 240 | 112 | 170 | 1.06e-11 | 65.1 |
Msa0795160 | AT1G78080.1 | 48.485 | 66 | 27 | 1 | 175 | 240 | 151 | 209 | 1.31e-11 | 65.5 |
Msa0795160 | AT2G20880.1 | 46.970 | 66 | 28 | 1 | 175 | 240 | 186 | 244 | 1.49e-11 | 65.1 |
Msa0795160 | AT4G28140.1 | 46.970 | 66 | 28 | 1 | 175 | 240 | 142 | 200 | 1.96e-11 | 64.3 |
Msa0795160 | AT5G21960.1 | 45.588 | 68 | 30 | 1 | 174 | 241 | 5 | 65 | 2.83e-11 | 62.8 |
Msa0795160 | AT5G07580.1 | 44.304 | 79 | 36 | 2 | 170 | 248 | 106 | 176 | 5.79e-11 | 62.0 |
Msa0795160 | AT1G12630.1 | 53.165 | 79 | 29 | 2 | 172 | 250 | 15 | 85 | 7.62e-11 | 61.2 |
Msa0795160 | AT3G23230.1 | 45.588 | 68 | 31 | 1 | 176 | 243 | 20 | 81 | 9.05e-11 | 59.7 |
Find 84 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTCCCTGTTCTCTTCTT+TGG | 0.134122 | 5_3:-7055133 | None:intergenic |
AGCAGGGAGAAGAGTGTTTA+AGG | 0.162468 | 5_3:+7061047 | Msa0795160:CDS |
GTTGATGCACTTGCTCTTAA+AGG | 0.164620 | 5_3:+7055324 | Msa0795160:CDS |
CTTCTCCCTGCTCTCTTCTT+TGG | 0.165077 | 5_3:-7061036 | None:intergenic |
CGTTGAAGATGGAGTATTTA+TGG | 0.178815 | 5_3:+7061392 | Msa0795160:CDS |
CAGTTCCTCCCAAGTGATTT+TGG | 0.186950 | 5_3:+7061002 | Msa0795160:CDS |
AACAGGGAGAAGATTGTTTA+AGG | 0.188712 | 5_3:+7055144 | Msa0795160:CDS |
GTTGCTGCACTTGCTCTTAA+AGG | 0.198231 | 5_3:+7061231 | Msa0795160:CDS |
AAGTTCCTCGGATGTGATTT+TGG | 0.241477 | 5_3:+7055099 | Msa0795160:CDS |
TGTGCACGTGCAGCCATTTC+AGG | 0.278245 | 5_3:-7061204 | None:intergenic |
AACTTATCCGGCTCCTAAAA+TGG | 0.278789 | 5_3:+7055284 | Msa0795160:CDS |
CTGTGCTTCTAGCACATTCT+TGG | 0.281396 | 5_3:-7061427 | None:intergenic |
GATTTCTTCATGTCATCTTT+TGG | 0.293162 | 5_3:+7055031 | Msa0795160:CDS |
AAAACAATAAGTCAAGGATT+TGG | 0.365596 | 5_3:+7061163 | Msa0795160:CDS |
GTTAAGCCAAAGAAGAGAAC+AGG | 0.375974 | 5_3:+7055127 | Msa0795160:CDS |
TGCTCAGTTGATTGCGGTTG+AGG | 0.376126 | 5_3:+7055443 | Msa0795160:CDS |
TGGTAGTAACTACGATGATA+TGG | 0.397522 | 5_3:+7061551 | Msa0795160:CDS |
ACACTCAGATAGTTTCTTTG+TGG | 0.402660 | 5_3:+7061583 | Msa0795160:CDS |
TTACTACCATTGTAATTTGT+AGG | 0.404075 | 5_3:-7061537 | None:intergenic |
TGCATGGCGGTTGACGTTGC+CGG | 0.406208 | 5_3:+7061284 | Msa0795160:CDS |
GATTTGGCTTGGAACTTATC+CGG | 0.409492 | 5_3:+7055272 | Msa0795160:CDS |
TACTACCATTGTAATTTGTA+GGG | 0.419201 | 5_3:-7061536 | None:intergenic |
TCCGAGGAACTTGTACGGTT+TGG | 0.438102 | 5_3:-7055088 | None:intergenic |
TGCATGGTGGTTGACGTTGC+CGG | 0.439412 | 5_3:+7055377 | Msa0795160:CDS |
GGTGATAAGGAGGGCGGCCA+TGG | 0.439428 | 5_3:+7055416 | Msa0795160:CDS |
AACATATCCAACTCCTGAAA+TGG | 0.444364 | 5_3:+7061191 | Msa0795160:CDS |
CGAATGATGCGGTGGTGATA+AGG | 0.456760 | 5_3:+7055403 | Msa0795160:CDS |
CGTGCAGCCATTTCAGGAGT+TGG | 0.460218 | 5_3:-7061198 | None:intergenic |
TGTGCTAGAAGCACAGGTTC+CGG | 0.470245 | 5_3:+7061434 | Msa0795160:CDS |
CCTACTTGTTATTGTTCCTA+CGG | 0.475198 | 5_3:-7055198 | None:intergenic |
CTAATGATACGGTGGAGATA+AGG | 0.490158 | 5_3:+7061310 | Msa0795160:CDS |
TGTTGTGTTACCGTTGAAGA+TGG | 0.492239 | 5_3:+7061381 | Msa0795160:CDS |
CTTGGGAGGAACTGCTTGTA+CGG | 0.494169 | 5_3:-7060993 | None:intergenic |
GGAGATAAGGAGAGCGGCGA+TGG | 0.502163 | 5_3:+7061323 | Msa0795160:CDS |
CAAGAATGTGCTAGAAGCAC+AGG | 0.506339 | 5_3:+7061428 | Msa0795160:CDS |
AATAAGTCAAGGATTTGGCT+TGG | 0.507380 | 5_3:+7055261 | Msa0795160:intron |
AATAAGTCAAGGATTTGGCT+TGG | 0.507380 | 5_3:+7061168 | Msa0795160:CDS |
GTGCAGATGCCAAAATCACT+TGG | 0.509059 | 5_3:-7061011 | None:intergenic |
GCACAACCAAAGAAGAGAGC+AGG | 0.509106 | 5_3:+7061030 | Msa0795160:CDS |
GAGGAACTGCTTGTACGGTT+TGG | 0.509720 | 5_3:-7060988 | None:intergenic |
ACCAAACCGTACAAGTTCCT+CGG | 0.514287 | 5_3:+7055087 | Msa0795160:CDS |
TGTTCCTACGGCGTACTCCT+CGG | 0.516048 | 5_3:-7055186 | None:intergenic |
GGAGGCTGCTCAGTTGTTTG+CGG | 0.520166 | 5_3:+7061344 | Msa0795160:CDS |
AATCAACTGAGCAGCCTCCA+TGG | 0.534399 | 5_3:-7055433 | None:intergenic |
CCATTGTAATTTGTAGGGGA+AGG | 0.540315 | 5_3:-7061531 | None:intergenic |
TTGTAATTTGTAGGGGAAGG+AGG | 0.542013 | 5_3:-7061528 | None:intergenic |
CATAAATACTCCATCTTCAA+CGG | 0.545272 | 5_3:-7061391 | None:intergenic |
AGATGGAGTATTTATGGACA+TGG | 0.547842 | 5_3:+7061398 | Msa0795160:CDS |
TGCGGTTGAGGACAAGAAGA+AGG | 0.559598 | 5_3:+7055455 | Msa0795160:CDS |
TTGTTAACGTTATTGTTAGG+AGG | 0.560970 | 5_3:-7061141 | None:intergenic |
GATAAGGAGGGCGGCCATGG+AGG | 0.571641 | 5_3:+7055419 | Msa0795160:CDS |
CGGCGTACTCCTCGGTACAC+TGG | 0.580054 | 5_3:-7055178 | None:intergenic |
CACAACCAAAGAAGAGAGCA+GGG | 0.582496 | 5_3:+7061031 | Msa0795160:CDS |
GAAGGAGGATTAGAACGTAA+AGG | 0.587355 | 5_3:-7061513 | None:intergenic |
TGTATCGAGGAGTACGAAGA+AGG | 0.588071 | 5_3:+7061085 | Msa0795160:CDS |
ATGATGCGGTGGTGATAAGG+AGG | 0.589484 | 5_3:+7055406 | Msa0795160:CDS |
CTTCGTACTCCTCGATACAC+TGG | 0.590208 | 5_3:-7061081 | None:intergenic |
GATAAGGAGAGCGGCGATGG+AGG | 0.595614 | 5_3:+7061326 | Msa0795160:CDS |
GAAGAAGGAACAATAACAAG+TGG | 0.596284 | 5_3:+7061100 | Msa0795160:CDS |
GAAGAGTGTTTAAGGAGACA+AGG | 0.613517 | 5_3:+7061055 | Msa0795160:CDS |
ACTACCATTGTAATTTGTAG+GGG | 0.622305 | 5_3:-7061535 | None:intergenic |
TTAAGCCAAAGAAGAGAACA+GGG | 0.625118 | 5_3:+7055128 | Msa0795160:CDS |
TCAAATTCTGATGACACCAC+CGG | 0.625258 | 5_3:-7061453 | None:intergenic |
GTTGAGGACAAGAAGAAGGA+TGG | 0.625480 | 5_3:+7055459 | Msa0795160:CDS |
GTTGCCGGAGTCTAATGATA+CGG | 0.626022 | 5_3:+7061299 | Msa0795160:CDS |
TGCGGTGGTGATAAGGAGGG+CGG | 0.633708 | 5_3:+7055410 | Msa0795160:CDS |
TCACATCCGAGGAACTTGTA+CGG | 0.637504 | 5_3:-7055093 | None:intergenic |
TGCAGATGCCAAAATCACTT+GGG | 0.638298 | 5_3:-7061010 | None:intergenic |
GGAGGCTGCTCAGTTGATTG+CGG | 0.654285 | 5_3:+7055437 | Msa0795160:CDS |
AAGAAGGAACAATAACAAGT+GGG | 0.657680 | 5_3:+7061101 | Msa0795160:CDS |
CCTTCCCCTACAAATTACAA+TGG | 0.665071 | 5_3:+7061531 | Msa0795160:CDS |
GCTAGAAGCACAGGTTCCGG+TGG | 0.665455 | 5_3:+7061437 | Msa0795160:CDS |
ACAAGGCATCCAGTGTATCG+AGG | 0.668565 | 5_3:+7061072 | Msa0795160:CDS |
GCCGGAGTCGAATGATGCGG+TGG | 0.671203 | 5_3:+7055395 | Msa0795160:CDS |
ACCACCGCATCATTCGACTC+CGG | 0.673922 | 5_3:-7055396 | None:intergenic |
AGATGCCAAAATCACTTGGG+AGG | 0.675174 | 5_3:-7061007 | None:intergenic |
TGATGCGGTGGTGATAAGGA+GGG | 0.675353 | 5_3:+7055407 | Msa0795160:CDS |
TACGGTGGAGATAAGGAGAG+CGG | 0.678233 | 5_3:+7061317 | Msa0795160:CDS |
TGATGCCAAAATCACATCCG+AGG | 0.687446 | 5_3:-7055104 | None:intergenic |
GCCGGAGTCTAATGATACGG+TGG | 0.705686 | 5_3:+7061302 | Msa0795160:CDS |
TCCACCGTATCATTAGACTC+CGG | 0.706319 | 5_3:-7061303 | None:intergenic |
ACAAGACATCCAGTGTACCG+AGG | 0.717555 | 5_3:+7055169 | Msa0795160:CDS |
TGTACCGAGGAGTACGCCGT+AGG | 0.720447 | 5_3:+7055182 | Msa0795160:CDS |
GTTGCCGGAGTCGAATGATG+CGG | 0.740697 | 5_3:+7055392 | Msa0795160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAATTTTCATTTCATTTT+AGG | + | chr5_3:7056621-7056640 | Msa0795160:intron | 10.0% |
!!! | TTAATTTTCATTTCATTTTA+GGG | + | chr5_3:7056622-7056641 | Msa0795160:intron | 10.0% |
!!! | TCATAAAAATAAAACATTTT+AGG | + | chr5_3:7060340-7060359 | Msa0795160:intron | 10.0% |
!!! | ATTGTTTACTTTTATTTTAT+GGG | - | chr5_3:7060671-7060690 | None:intergenic | 10.0% |
!!! | AATTGTTTACTTTTATTTTA+TGG | - | chr5_3:7060672-7060691 | None:intergenic | 10.0% |
!!! | TTCTAAAAATTACAACAATA+TGG | + | chr5_3:7056269-7056288 | Msa0795160:intron | 15.0% |
!! | AAAAAGTTATGTACTAATTT+CGG | - | chr5_3:7057005-7057024 | None:intergenic | 15.0% |
!!! | ATTAGTACATAACTTTTTTA+TGG | + | chr5_3:7057007-7057026 | Msa0795160:intron | 15.0% |
!! | AAATTAAAGAAATGTAAAGA+CGG | + | chr5_3:7057416-7057435 | Msa0795160:intron | 15.0% |
!! | TTAAAATTACAGAAATTGAA+AGG | + | chr5_3:7057508-7057527 | Msa0795160:intron | 15.0% |
!! | AAAAAGTTATGTACTAATTT+CGG | - | chr5_3:7057005-7057024 | None:intergenic | 15.0% |
!!! | ATTAGTACATAACTTTTTTA+TGG | + | chr5_3:7057007-7057026 | Msa0795160:intron | 15.0% |
!! | AAATTAAAGAAATGTAAAGA+CGG | + | chr5_3:7057416-7057435 | Msa0795160:intron | 15.0% |
!! | TTAAAATTACAGAAATTGAA+AGG | + | chr5_3:7057508-7057527 | Msa0795160:intron | 15.0% |
!! | AAAAAGTTATGTACTAATTT+CGG | - | chr5_3:7057005-7057024 | None:intergenic | 15.0% |
!!! | ATTAGTACATAACTTTTTTA+TGG | + | chr5_3:7057007-7057026 | Msa0795160:intron | 15.0% |
!! | AAATTAAAGAAATGTAAAGA+CGG | + | chr5_3:7057416-7057435 | Msa0795160:intron | 15.0% |
!! | TTAAAATTACAGAAATTGAA+AGG | + | chr5_3:7057508-7057527 | Msa0795160:intron | 15.0% |
!! | AAAAAGTTATGTACTAATTT+CGG | - | chr5_3:7057005-7057024 | None:intergenic | 15.0% |
!!! | ATTAGTACATAACTTTTTTA+TGG | + | chr5_3:7057007-7057026 | Msa0795160:intron | 15.0% |
!! | AAATTAAAGAAATGTAAAGA+CGG | + | chr5_3:7057416-7057435 | Msa0795160:intron | 15.0% |
!! | TTAAAATTACAGAAATTGAA+AGG | + | chr5_3:7057508-7057527 | Msa0795160:intron | 15.0% |
!!! | TAAGTTGAATATTATTGAAT+TGG | - | chr5_3:7060220-7060239 | None:intergenic | 15.0% |
!! | TTCTATATCATATATTCTTA+TGG | + | chr5_3:7060282-7060301 | Msa0795160:intron | 15.0% |
!!! | TAATTAAAGATGTTTCTATT+TGG | + | chr5_3:7060377-7060396 | Msa0795160:intron | 15.0% |
!!! | TTTTTGTTAACGTTATTGTT+AGG | - | chr5_3:7055240-7055259 | None:intergenic | 20.0% |
!! | TTAACAAAAACAATAAGTCA+AGG | + | chr5_3:7055250-7055269 | Msa0795160:intron | 20.0% |
!! | TTGATTAAGGATATGAAAAA+AGG | + | chr5_3:7056671-7056690 | Msa0795160:intron | 20.0% |
!!! | ATAGTAATAATTCCCTTTTA+TGG | + | chr5_3:7056764-7056783 | Msa0795160:intron | 20.0% |
!! | TACATAGGTTATAAAATGAA+GGG | - | chr5_3:7056829-7056848 | None:intergenic | 20.0% |
!! | ATACATAGGTTATAAAATGA+AGG | - | chr5_3:7056830-7056849 | None:intergenic | 20.0% |
!!! | AGTCTCTTACAAATTTTTAA+CGG | + | chr5_3:7056950-7056969 | Msa0795160:intron | 20.0% |
!! | TAAAATGACACAAACTAATT+TGG | + | chr5_3:7057085-7057104 | Msa0795160:intron | 20.0% |
!!! | TGAATGCATTGATTTTTTTT+TGG | + | chr5_3:7057242-7057261 | Msa0795160:intron | 20.0% |
!!! | GAATGCATTGATTTTTTTTT+GGG | + | chr5_3:7057243-7057262 | Msa0795160:intron | 20.0% |
!!! | TTTCTTTAATTTTACTCGAA+AGG | - | chr5_3:7057408-7057427 | None:intergenic | 20.0% |
!!! | TTTCTTTGACAAAATTTTGT+TGG | + | chr5_3:7057482-7057501 | Msa0795160:intron | 20.0% |
!! | AATTGAAAGGAATTTAAAGA+CGG | + | chr5_3:7057521-7057540 | Msa0795160:intron | 20.0% |
!!! | AGTCTCTTACAAATTTTTAA+CGG | + | chr5_3:7056950-7056969 | Msa0795160:intron | 20.0% |
!! | TAAAATGACACAAACTAATT+TGG | + | chr5_3:7057085-7057104 | Msa0795160:intron | 20.0% |
!!! | TGAATGCATTGATTTTTTTT+TGG | + | chr5_3:7057242-7057261 | Msa0795160:intron | 20.0% |
!!! | GAATGCATTGATTTTTTTTT+GGG | + | chr5_3:7057243-7057262 | Msa0795160:intron | 20.0% |
!!! | TTTCTTTAATTTTACTCGAA+AGG | - | chr5_3:7057408-7057427 | None:intergenic | 20.0% |
!!! | TTTCTTTGACAAAATTTTGT+TGG | + | chr5_3:7057482-7057501 | Msa0795160:intron | 20.0% |
!! | AATTGAAAGGAATTTAAAGA+CGG | + | chr5_3:7057521-7057540 | Msa0795160:intron | 20.0% |
!!! | AGTCTCTTACAAATTTTTAA+CGG | + | chr5_3:7056950-7056969 | Msa0795160:intron | 20.0% |
!! | TAAAATGACACAAACTAATT+TGG | + | chr5_3:7057085-7057104 | Msa0795160:intron | 20.0% |
!!! | TGAATGCATTGATTTTTTTT+TGG | + | chr5_3:7057242-7057261 | Msa0795160:intron | 20.0% |
!!! | GAATGCATTGATTTTTTTTT+GGG | + | chr5_3:7057243-7057262 | Msa0795160:intron | 20.0% |
!!! | TTTCTTTAATTTTACTCGAA+AGG | - | chr5_3:7057408-7057427 | None:intergenic | 20.0% |
!!! | TTTCTTTGACAAAATTTTGT+TGG | + | chr5_3:7057482-7057501 | Msa0795160:intron | 20.0% |
!! | AATTGAAAGGAATTTAAAGA+CGG | + | chr5_3:7057521-7057540 | Msa0795160:intron | 20.0% |
!!! | AGTCTCTTACAAATTTTTAA+CGG | + | chr5_3:7056950-7056969 | Msa0795160:intron | 20.0% |
!! | TAAAATGACACAAACTAATT+TGG | + | chr5_3:7057085-7057104 | Msa0795160:intron | 20.0% |
!!! | TGAATGCATTGATTTTTTTT+TGG | + | chr5_3:7057242-7057261 | Msa0795160:intron | 20.0% |
!!! | GAATGCATTGATTTTTTTTT+GGG | + | chr5_3:7057243-7057262 | Msa0795160:intron | 20.0% |
!!! | TTTCTTTAATTTTACTCGAA+AGG | - | chr5_3:7057408-7057427 | None:intergenic | 20.0% |
!!! | TTTCTTTGACAAAATTTTGT+TGG | + | chr5_3:7057482-7057501 | Msa0795160:intron | 20.0% |
!! | AATTGAAAGGAATTTAAAGA+CGG | + | chr5_3:7057521-7057540 | Msa0795160:intron | 20.0% |
!!! | AAGTTTTGTACTTAAAGTTT+TGG | + | chr5_3:7059771-7059790 | Msa0795160:intron | 20.0% |
!! | CTTATGAAATATATAGTGAT+TGG | + | chr5_3:7060061-7060080 | Msa0795160:intron | 20.0% |
!! | GATTTAAATTTCATTTGAGA+TGG | - | chr5_3:7060136-7060155 | None:intergenic | 20.0% |
!! | AAAGATTATCCATATTTCAT+TGG | + | chr5_3:7060468-7060487 | Msa0795160:intron | 20.0% |
!! | ATTATGTGATTGAATTGAAT+TGG | - | chr5_3:7060884-7060903 | None:intergenic | 20.0% |
!!! | AATATTTTCCTTTCATCTTT+TGG | + | chr5_3:7060925-7060944 | Msa0795160:intron | 20.0% |
!!! | TTTTTGTTAACGTTATTGTT+AGG | - | chr5_3:7055240-7055259 | None:intergenic | 20.0% |
!! | TTAACAAAAACAATAAGTCA+AGG | + | chr5_3:7055250-7055269 | Msa0795160:intron | 20.0% |
! | AAAACAATAAGTCAAGGATT+TGG | + | chr5_3:7055256-7055275 | Msa0795160:intron | 25.0% |
!! | TGCGTTATTATTTAAAGTTG+TGG | - | chr5_3:7055635-7055654 | None:intergenic | 25.0% |
!! | GCAAGAATGATAATTTTATC+AGG | + | chr5_3:7055868-7055887 | Msa0795160:intron | 25.0% |
! | TTTATCTCAGGAAGTAAAAT+TGG | + | chr5_3:7055897-7055916 | Msa0795160:intron | 25.0% |
! | TTAAATTGCTTACTAAGTCA+AGG | - | chr5_3:7056124-7056143 | None:intergenic | 25.0% |
! | TTCAAACTCAACTAAAAAAG+AGG | - | chr5_3:7056412-7056431 | None:intergenic | 25.0% |
!!! | GCACATAAACATATTTTTGT+TGG | + | chr5_3:7056446-7056465 | Msa0795160:intron | 25.0% |
! | TGATTAAGCATACCATAAAA+GGG | - | chr5_3:7056779-7056798 | None:intergenic | 25.0% |
! | TTCACTCTAAACTAAAAACA+CGG | - | chr5_3:7056920-7056939 | None:intergenic | 25.0% |
!!! | ATTTCGGTGTTATTTTTTGT+TGG | - | chr5_3:7056989-7057008 | None:intergenic | 25.0% |
! | TTCACTCTAAACTAAAAACA+CGG | - | chr5_3:7056920-7056939 | None:intergenic | 25.0% |
!!! | ATTTCGGTGTTATTTTTTGT+TGG | - | chr5_3:7056989-7057008 | None:intergenic | 25.0% |
! | TTCACTCTAAACTAAAAACA+CGG | - | chr5_3:7056920-7056939 | None:intergenic | 25.0% |
!!! | ATTTCGGTGTTATTTTTTGT+TGG | - | chr5_3:7056989-7057008 | None:intergenic | 25.0% |
! | TTCACTCTAAACTAAAAACA+CGG | - | chr5_3:7056920-7056939 | None:intergenic | 25.0% |
!!! | ATTTCGGTGTTATTTTTTGT+TGG | - | chr5_3:7056989-7057008 | None:intergenic | 25.0% |
!!! | TCAGTTGTAAGCTATTTTTT+CGG | - | chr5_3:7059846-7059865 | None:intergenic | 25.0% |
! | AATAGCTTACAACTGAATTT+AGG | + | chr5_3:7059850-7059869 | Msa0795160:intron | 25.0% |
!! | ACAAAAGTACATAAACACTT+TGG | + | chr5_3:7059991-7060010 | Msa0795160:intron | 25.0% |
! | GTTGAATATTATTGAATTGG+TGG | - | chr5_3:7060217-7060236 | None:intergenic | 25.0% |
! | ATTTGGTTACCAATGAAATA+TGG | - | chr5_3:7060480-7060499 | None:intergenic | 25.0% |
! | ACTATAGATGACATATGATA+GGG | - | chr5_3:7060639-7060658 | None:intergenic | 25.0% |
! | TACTATAGATGACATATGAT+AGG | - | chr5_3:7060640-7060659 | None:intergenic | 25.0% |
! | GGAGTTTATATATAGCTAAT+GGG | - | chr5_3:7060829-7060848 | None:intergenic | 25.0% |
! | TGGAGTTTATATATAGCTAA+TGG | - | chr5_3:7060830-7060849 | None:intergenic | 25.0% |
! | ATATTCATGAGAATCTAAGT+TGG | - | chr5_3:7060910-7060929 | None:intergenic | 25.0% |
! | AAAACAATAAGTCAAGGATT+TGG | + | chr5_3:7055256-7055275 | Msa0795160:intron | 25.0% |
!! | TACTACCATTGTAATTTGTA+GGG | - | chr5_3:7061539-7061558 | None:intergenic | 25.0% |
!! | TTACTACCATTGTAATTTGT+AGG | - | chr5_3:7061540-7061559 | None:intergenic | 25.0% |
! | GATTTCTTCATGTCATCTTT+TGG | + | chr5_3:7055031-7055050 | Msa0795160:CDS | 30.0% |
ATCAAGTACAACAAGTTTGT+CGG | - | chr5_3:7055591-7055610 | None:intergenic | 30.0% | |
! | TATTTAAAGTTGTGGTGTTG+CGG | - | chr5_3:7055627-7055646 | None:intergenic | 30.0% |
!!! | CTAGTTTGTTTTGTAGAATC+TGG | - | chr5_3:7055712-7055731 | None:intergenic | 30.0% |
ATCACATTAGTATTAACCTG+AGG | + | chr5_3:7055748-7055767 | Msa0795160:intron | 30.0% | |
AAAACAAAGTTGTGAGGTAT+CGG | + | chr5_3:7055928-7055947 | Msa0795160:intron | 30.0% | |
AAGTTAACGTTGTGAAGAAA+TGG | + | chr5_3:7056092-7056111 | Msa0795160:intron | 30.0% | |
TACAACAATATGGTAGTAAC+TGG | + | chr5_3:7056279-7056298 | Msa0795160:intron | 30.0% | |
ACAACAATATGGTAGTAACT+GGG | + | chr5_3:7056280-7056299 | Msa0795160:intron | 30.0% | |
! | ACACTCAATTAGTTTCACTT+TGG | + | chr5_3:7056321-7056340 | Msa0795160:intron | 30.0% |
!! | CATTTTAGGGAAAAGCTAAT+CGG | + | chr5_3:7056635-7056654 | Msa0795160:intron | 30.0% |
CTGATTAAGCATACCATAAA+AGG | - | chr5_3:7056780-7056799 | None:intergenic | 30.0% | |
GAAAGATAGGAAAGATACAT+AGG | - | chr5_3:7056844-7056863 | None:intergenic | 30.0% | |
AGTGTTACAAAACTTGATAG+AGG | - | chr5_3:7056871-7056890 | None:intergenic | 30.0% | |
! | TTTTTGCTAATGACTAAGCT+GGG | + | chr5_3:7057115-7057134 | Msa0795160:intron | 30.0% |
AATCAATGCATTCAAACTGT+CGG | - | chr5_3:7057236-7057255 | None:intergenic | 30.0% | |
! | TTTTTGCTAATGACTAAGCT+GGG | + | chr5_3:7057115-7057134 | Msa0795160:intron | 30.0% |
AATCAATGCATTCAAACTGT+CGG | - | chr5_3:7057236-7057255 | None:intergenic | 30.0% | |
! | TTTTTGCTAATGACTAAGCT+GGG | + | chr5_3:7057115-7057134 | Msa0795160:intron | 30.0% |
AATCAATGCATTCAAACTGT+CGG | - | chr5_3:7057236-7057255 | None:intergenic | 30.0% | |
! | TTTTTGCTAATGACTAAGCT+GGG | + | chr5_3:7057115-7057134 | Msa0795160:intron | 30.0% |
AATCAATGCATTCAAACTGT+CGG | - | chr5_3:7057236-7057255 | None:intergenic | 30.0% | |
! | TAAAACTTTTGCCCTACTAT+AGG | - | chr5_3:7059715-7059734 | None:intergenic | 30.0% |
CTACACTAAGCATATACTAT+AGG | - | chr5_3:7059738-7059757 | None:intergenic | 30.0% | |
ATTAGTCATCAATATCAGTG+TGG | - | chr5_3:7060107-7060126 | None:intergenic | 30.0% | |
! | CAAACTTTTACCATATGTGA+AGG | + | chr5_3:7060177-7060196 | Msa0795160:intron | 30.0% |
TATAGAATTAGTACGATACG+AGG | - | chr5_3:7060269-7060288 | None:intergenic | 30.0% | |
! | TCATTGGTAACCAAATAAGA+AGG | + | chr5_3:7060484-7060503 | Msa0795160:intron | 30.0% |
! | TGATTGAATTGAATTGGCTT+AGG | - | chr5_3:7060878-7060897 | None:intergenic | 30.0% |
AAGAAGGAACAATAACAAGT+GGG | + | chr5_3:7061101-7061120 | Msa0795160:CDS | 30.0% | |
TTGTTAACGTTATTGTTAGG+AGG | - | chr5_3:7055237-7055256 | None:intergenic | 30.0% | |
CATAAATACTCCATCTTCAA+CGG | - | chr5_3:7061394-7061413 | None:intergenic | 30.0% | |
! | ACTACCATTGTAATTTGTAG+GGG | - | chr5_3:7061538-7061557 | None:intergenic | 30.0% |
TTAAGCCAAAGAAGAGAACA+GGG | + | chr5_3:7055128-7055147 | Msa0795160:CDS | 35.0% | |
AACAGGGAGAAGATTGTTTA+AGG | + | chr5_3:7055144-7055163 | Msa0795160:CDS | 35.0% | |
!! | CCTACTTGTTATTGTTCCTA+CGG | - | chr5_3:7055201-7055220 | None:intergenic | 35.0% |
TAACAAGTAGGTTTGTGAGA+TGG | + | chr5_3:7055210-7055229 | Msa0795160:intron | 35.0% | |
AATAAGTCAAGGATTTGGCT+TGG | + | chr5_3:7055261-7055280 | Msa0795160:intron | 35.0% | |
!!! | TTAATTTTGCTGACTCTGCA+TGG | + | chr5_3:7055361-7055380 | Msa0795160:CDS | 35.0% |
TCAAGTACAACAAGTTTGTC+GGG | - | chr5_3:7055590-7055609 | None:intergenic | 35.0% | |
!! | TGCGTTGTTATTTGAAGTTG+CGG | - | chr5_3:7055689-7055708 | None:intergenic | 35.0% |
ATCAGGCATATGTTTATCTC+AGG | + | chr5_3:7055885-7055904 | Msa0795160:intron | 35.0% | |
GAGAAGAAAACAAAGTTGTG+AGG | + | chr5_3:7055922-7055941 | Msa0795160:intron | 35.0% | |
TTATTCTAGCATGACTAAGC+AGG | - | chr5_3:7056054-7056073 | None:intergenic | 35.0% | |
GCTTAGTCATGCTAGAATAA+AGG | + | chr5_3:7056054-7056073 | Msa0795160:intron | 35.0% | |
ACGTTGTGAAGAAATGGTAA+CGG | + | chr5_3:7056098-7056117 | Msa0795160:intron | 35.0% | |
CAACAATATGGTAGTAACTG+GGG | + | chr5_3:7056281-7056300 | Msa0795160:intron | 35.0% | |
AGGTTATAAAATGAAGGGTC+CGG | - | chr5_3:7056824-7056843 | None:intergenic | 35.0% | |
TGATAGAGGTCATGAAAGAT+AGG | - | chr5_3:7056857-7056876 | None:intergenic | 35.0% | |
CTATGTGCTATAATGAGTCA+AGG | + | chr5_3:7057045-7057064 | Msa0795160:intron | 35.0% | |
! | GTTTTTGCTAATGACTAAGC+TGG | + | chr5_3:7057114-7057133 | Msa0795160:intron | 35.0% |
TGCTGAAATTGAAATGGCAA+TGG | + | chr5_3:7057439-7057458 | Msa0795160:intron | 35.0% | |
TGAAAGGAATTTAAAGACGG+TGG | + | chr5_3:7057524-7057543 | Msa0795160:intron | 35.0% | |
CGCTATAAGTTACACATCTA+TGG | - | chr5_3:7057584-7057603 | None:intergenic | 35.0% | |
CTATGTGCTATAATGAGTCA+AGG | + | chr5_3:7057045-7057064 | Msa0795160:intron | 35.0% | |
! | GTTTTTGCTAATGACTAAGC+TGG | + | chr5_3:7057114-7057133 | Msa0795160:intron | 35.0% |
TGCTGAAATTGAAATGGCAA+TGG | + | chr5_3:7057439-7057458 | Msa0795160:intron | 35.0% | |
TGAAAGGAATTTAAAGACGG+TGG | + | chr5_3:7057524-7057543 | Msa0795160:intron | 35.0% | |
CGCTATAAGTTACACATCTA+TGG | - | chr5_3:7057584-7057603 | None:intergenic | 35.0% | |
CTATGTGCTATAATGAGTCA+AGG | + | chr5_3:7057045-7057064 | Msa0795160:intron | 35.0% | |
! | GTTTTTGCTAATGACTAAGC+TGG | + | chr5_3:7057114-7057133 | Msa0795160:intron | 35.0% |
TGCTGAAATTGAAATGGCAA+TGG | + | chr5_3:7057439-7057458 | Msa0795160:intron | 35.0% | |
TGAAAGGAATTTAAAGACGG+TGG | + | chr5_3:7057524-7057543 | Msa0795160:intron | 35.0% | |
CGCTATAAGTTACACATCTA+TGG | - | chr5_3:7057584-7057603 | None:intergenic | 35.0% | |
CTATGTGCTATAATGAGTCA+AGG | + | chr5_3:7057045-7057064 | Msa0795160:intron | 35.0% | |
! | GTTTTTGCTAATGACTAAGC+TGG | + | chr5_3:7057114-7057133 | Msa0795160:intron | 35.0% |
TGCTGAAATTGAAATGGCAA+TGG | + | chr5_3:7057439-7057458 | Msa0795160:intron | 35.0% | |
TGAAAGGAATTTAAAGACGG+TGG | + | chr5_3:7057524-7057543 | Msa0795160:intron | 35.0% | |
CGCTATAAGTTACACATCTA+TGG | - | chr5_3:7057584-7057603 | None:intergenic | 35.0% | |
TTTAGGCTAAGCCAAGTTAA+AGG | + | chr5_3:7059867-7059886 | Msa0795160:intron | 35.0% | |
ACATTCAGTTGCCTTTAACT+TGG | - | chr5_3:7059881-7059900 | None:intergenic | 35.0% | |
ATGCATAAACTACCAAGACT+TGG | - | chr5_3:7059955-7059974 | None:intergenic | 35.0% | |
CGTGCTTTATCCTTCTTATT+TGG | - | chr5_3:7060497-7060516 | None:intergenic | 35.0% | |
AACTTGCCATAAGCTTGAAT+GGG | + | chr5_3:7060546-7060565 | Msa0795160:intron | 35.0% | |
CATAAGCTTGAATGGGTATT+GGG | + | chr5_3:7060553-7060572 | Msa0795160:intron | 35.0% | |
TATTGTTGACACCTTGACTT+GGG | - | chr5_3:7060584-7060603 | None:intergenic | 35.0% | |
TTATTGTTGACACCTTGACT+TGG | - | chr5_3:7060585-7060604 | None:intergenic | 35.0% | |
! | AAGTCAAGGTGTCAACAATA+AGG | + | chr5_3:7060584-7060603 | Msa0795160:intron | 35.0% |
ATGACATATGATAGGGACAA+AGG | - | chr5_3:7060632-7060651 | None:intergenic | 35.0% | |
GAAGAAGGAACAATAACAAG+TGG | + | chr5_3:7061100-7061119 | Msa0795160:CDS | 35.0% | |
AATAAGTCAAGGATTTGGCT+TGG | + | chr5_3:7055261-7055280 | Msa0795160:intron | 35.0% | |
AACATATCCAACTCCTGAAA+TGG | + | chr5_3:7061191-7061210 | Msa0795160:CDS | 35.0% | |
!!! | TTAATTTTGCTGACTCTGCA+TGG | + | chr5_3:7055361-7055380 | Msa0795160:CDS | 35.0% |
! | CGTTGAAGATGGAGTATTTA+TGG | + | chr5_3:7061392-7061411 | Msa0795160:CDS | 35.0% |
! | AGATGGAGTATTTATGGACA+TGG | + | chr5_3:7061398-7061417 | Msa0795160:CDS | 35.0% |
TGGTAGTAACTACGATGATA+TGG | + | chr5_3:7061551-7061570 | Msa0795160:CDS | 35.0% | |
ACACTCAGATAGTTTCTTTG+TGG | + | chr5_3:7061583-7061602 | Msa0795160:CDS | 35.0% | |
! | AAGTTCCTCGGATGTGATTT+TGG | + | chr5_3:7055099-7055118 | Msa0795160:CDS | 40.0% |
GTTAAGCCAAAGAAGAGAAC+AGG | + | chr5_3:7055127-7055146 | Msa0795160:CDS | 40.0% | |
CCGTAGGAACAATAACAAGT+AGG | + | chr5_3:7055198-7055217 | Msa0795160:intron | 40.0% | |
!! | GATTTGGCTTGGAACTTATC+CGG | + | chr5_3:7055272-7055291 | Msa0795160:CDS | 40.0% |
AACTTATCCGGCTCCTAAAA+TGG | + | chr5_3:7055284-7055303 | Msa0795160:CDS | 40.0% | |
GTTGATGCACTTGCTCTTAA+AGG | + | chr5_3:7055324-7055343 | Msa0795160:CDS | 40.0% | |
GAAGGATGGTATCTTCATTG+AGG | + | chr5_3:7055473-7055492 | Msa0795160:intron | 40.0% | |
CTTCATTGAGGAACAACTTC+CGG | + | chr5_3:7055485-7055504 | Msa0795160:intron | 40.0% | |
CAAGTACAACAAGTTTGTCG+GGG | - | chr5_3:7055589-7055608 | None:intergenic | 40.0% | |
!! | GTTGTTATTTGAAGTTGCGG+TGG | - | chr5_3:7055686-7055705 | None:intergenic | 40.0% |
ATTGAGGCGGATAAATTCCA+AGG | - | chr5_3:7055789-7055808 | None:intergenic | 40.0% | |
TAACCTCCATAACTTGGAGA+AGG | - | chr5_3:7055841-7055860 | None:intergenic | 40.0% | |
GTTGTGTAACCTCCATAACT+TGG | - | chr5_3:7055847-7055866 | None:intergenic | 40.0% | |
! | CAAGCACACTACACTCTTTT+TGG | + | chr5_3:7056363-7056382 | Msa0795160:intron | 40.0% |
ATCCTTAATCAATGCCACGA+GGG | - | chr5_3:7056663-7056682 | None:intergenic | 40.0% | |
TATCCTTAATCAATGCCACG+AGG | - | chr5_3:7056664-7056683 | None:intergenic | 40.0% | |
! | AGACGGTGCTGAAATTGAAA+TGG | + | chr5_3:7057433-7057452 | Msa0795160:intron | 40.0% |
! | AGACGGTGCTGAAATTGAAA+TGG | + | chr5_3:7057433-7057452 | Msa0795160:intron | 40.0% |
! | AGACGGTGCTGAAATTGAAA+TGG | + | chr5_3:7057433-7057452 | Msa0795160:intron | 40.0% |
! | AGACGGTGCTGAAATTGAAA+TGG | + | chr5_3:7057433-7057452 | Msa0795160:intron | 40.0% |
ATAGCGAGTCAACCTTAGTA+AGG | + | chr5_3:7059677-7059696 | Msa0795160:intron | 40.0% | |
TATGCAGCTTGTCCTTACTA+AGG | - | chr5_3:7059692-7059711 | None:intergenic | 40.0% | |
ACAAGCTGCATACCTATAGT+AGG | + | chr5_3:7059700-7059719 | Msa0795160:intron | 40.0% | |
CAAGCTGCATACCTATAGTA+GGG | + | chr5_3:7059701-7059720 | Msa0795160:intron | 40.0% | |
AACACTTTGGCCACAATAGT+TGG | + | chr5_3:7060004-7060023 | Msa0795160:intron | 40.0% | |
CATCAATATCAGTGTGGCAA+GGG | - | chr5_3:7060101-7060120 | None:intergenic | 40.0% | |
TCATCAATATCAGTGTGGCA+AGG | - | chr5_3:7060102-7060121 | None:intergenic | 40.0% | |
GTAGATGTCACCTTCACATA+TGG | - | chr5_3:7060190-7060209 | None:intergenic | 40.0% | |
CATTCAAGCTTATGGCAAGT+TGG | - | chr5_3:7060547-7060566 | None:intergenic | 40.0% | |
CAACTTGCCATAAGCTTGAA+TGG | + | chr5_3:7060545-7060564 | Msa0795160:intron | 40.0% | |
CCAATACCCATTCAAGCTTA+TGG | - | chr5_3:7060555-7060574 | None:intergenic | 40.0% | |
CCATAAGCTTGAATGGGTAT+TGG | + | chr5_3:7060552-7060571 | Msa0795160:intron | 40.0% | |
! | GATAGGGACAAAGGTTGATT+TGG | - | chr5_3:7060623-7060642 | None:intergenic | 40.0% |
CACGTCTTTCACTAATGCTA+AGG | - | chr5_3:7060701-7060720 | None:intergenic | 40.0% | |
CTTAGCATTAGTGAAAGACG+TGG | + | chr5_3:7060699-7060718 | Msa0795160:intron | 40.0% | |
GCCAGTGTAAAGAAACACAA+GGG | - | chr5_3:7060725-7060744 | None:intergenic | 40.0% | |
AGCCAGTGTAAAGAAACACA+AGG | - | chr5_3:7060726-7060745 | None:intergenic | 40.0% | |
AGTAACTGAGTTAGTGTGTG+TGG | - | chr5_3:7060850-7060869 | None:intergenic | 40.0% | |
AGTAGTCGCCAAAAGATGAA+AGG | - | chr5_3:7060936-7060955 | None:intergenic | 40.0% | |
TGCAGATGCCAAAATCACTT+GGG | - | chr5_3:7061013-7061032 | None:intergenic | 40.0% | |
!! | GAAGAGTGTTTAAGGAGACA+AGG | + | chr5_3:7061055-7061074 | Msa0795160:CDS | 40.0% |
CTAATGATACGGTGGAGATA+AGG | + | chr5_3:7061310-7061329 | Msa0795160:CDS | 40.0% | |
TGTTGTGTTACCGTTGAAGA+TGG | + | chr5_3:7061381-7061400 | Msa0795160:CDS | 40.0% | |
TCAAATTCTGATGACACCAC+CGG | - | chr5_3:7061456-7061475 | None:intergenic | 40.0% | |
GAAGGAGGATTAGAACGTAA+AGG | - | chr5_3:7061516-7061535 | None:intergenic | 40.0% | |
! | TTGTAATTTGTAGGGGAAGG+AGG | - | chr5_3:7061531-7061550 | None:intergenic | 40.0% |
! | CCATTGTAATTTGTAGGGGA+AGG | - | chr5_3:7061534-7061553 | None:intergenic | 40.0% |
CCTTCCCCTACAAATTACAA+TGG | + | chr5_3:7061531-7061550 | Msa0795160:CDS | 40.0% | |
ACCAAACCGTACAAGTTCCT+CGG | + | chr5_3:7055087-7055106 | Msa0795160:CDS | 45.0% | |
TCACATCCGAGGAACTTGTA+CGG | - | chr5_3:7055096-7055115 | None:intergenic | 45.0% | |
TGATGCCAAAATCACATCCG+AGG | - | chr5_3:7055107-7055126 | None:intergenic | 45.0% | |
CTTCTCCCTGTTCTCTTCTT+TGG | - | chr5_3:7055136-7055155 | None:intergenic | 45.0% | |
!!! | ATTTTGCTGACTCTGCATGG+TGG | + | chr5_3:7055364-7055383 | Msa0795160:CDS | 45.0% |
GTTGAGGACAAGAAGAAGGA+TGG | + | chr5_3:7055459-7055478 | Msa0795160:CDS | 45.0% | |
TACAACAAGTTTGTCGGGGA+AGG | - | chr5_3:7055585-7055604 | None:intergenic | 45.0% | |
!! | TGCGGTGTTATTCGAAGTTG+CGG | - | chr5_3:7055662-7055681 | None:intergenic | 45.0% |
! | ATTTGAAGTTGCGGTGGTTG+CGG | - | chr5_3:7055680-7055699 | None:intergenic | 45.0% |
AGAAGGACCTGTTGAATCCT+GGG | - | chr5_3:7055824-7055843 | None:intergenic | 45.0% | |
ACAGGTCCTTCTCCAAGTTA+TGG | + | chr5_3:7055832-7055851 | Msa0795160:intron | 45.0% | |
GTATGCTTAATCAGTGCCCT+GGG | + | chr5_3:7056786-7056805 | Msa0795160:intron | 45.0% | |
TATGCTTAATCAGTGCCCTG+GGG | + | chr5_3:7056787-7056806 | Msa0795160:intron | 45.0% | |
CATTCTCAGCTTCCAAGTCT+TGG | + | chr5_3:7059940-7059959 | Msa0795160:intron | 45.0% | |
ACTTTGGCCACAATAGTTGG+AGG | + | chr5_3:7060007-7060026 | Msa0795160:intron | 45.0% | |
CTTCCTACCTCCAACTATTG+TGG | - | chr5_3:7060017-7060036 | None:intergenic | 45.0% | |
! | CTTATGGCAAGTTGGCAACT+AGG | - | chr5_3:7060539-7060558 | None:intergenic | 45.0% |
ATTGGGAAACACCCAAGTCA+AGG | + | chr5_3:7060570-7060589 | Msa0795160:intron | 45.0% | |
GCCCTTGTGTTTCTTTACAC+TGG | + | chr5_3:7060721-7060740 | Msa0795160:intron | 45.0% | |
TGGGTGAAGTGTAACAGAAC+AGG | - | chr5_3:7060810-7060829 | None:intergenic | 45.0% | |
! | CAGTTCCTCCCAAGTGATTT+TGG | + | chr5_3:7061002-7061021 | Msa0795160:CDS | 45.0% |
AGATGCCAAAATCACTTGGG+AGG | - | chr5_3:7061010-7061029 | None:intergenic | 45.0% | |
GTGCAGATGCCAAAATCACT+TGG | - | chr5_3:7061014-7061033 | None:intergenic | 45.0% | |
CACAACCAAAGAAGAGAGCA+GGG | + | chr5_3:7061031-7061050 | Msa0795160:CDS | 45.0% | |
!! | AGCAGGGAGAAGAGTGTTTA+AGG | + | chr5_3:7061047-7061066 | Msa0795160:CDS | 45.0% |
! | TGTATCGAGGAGTACGAAGA+AGG | + | chr5_3:7061085-7061104 | Msa0795160:CDS | 45.0% |
GTTGCTGCACTTGCTCTTAA+AGG | + | chr5_3:7061231-7061250 | Msa0795160:CDS | 45.0% | |
!!! | ATTTTGCTGACTCTGCATGG+CGG | + | chr5_3:7055364-7055383 | Msa0795160:CDS | 45.0% |
GTTGCCGGAGTCTAATGATA+CGG | + | chr5_3:7061299-7061318 | Msa0795160:CDS | 45.0% | |
TCCACCGTATCATTAGACTC+CGG | - | chr5_3:7061306-7061325 | None:intergenic | 45.0% | |
CTGTGCTTCTAGCACATTCT+TGG | - | chr5_3:7061430-7061449 | None:intergenic | 45.0% | |
! | CAAGAATGTGCTAGAAGCAC+AGG | + | chr5_3:7061428-7061447 | Msa0795160:CDS | 45.0% |
TCCGAGGAACTTGTACGGTT+TGG | - | chr5_3:7055091-7055110 | None:intergenic | 50.0% | |
ACAAGACATCCAGTGTACCG+AGG | + | chr5_3:7055169-7055188 | Msa0795160:CDS | 50.0% | |
!! | TGTGCACGTGCAGCCATTTT+AGG | - | chr5_3:7055300-7055319 | None:intergenic | 50.0% |
CGAATGATGCGGTGGTGATA+AGG | + | chr5_3:7055403-7055422 | Msa0795160:CDS | 50.0% | |
ATGATGCGGTGGTGATAAGG+AGG | + | chr5_3:7055406-7055425 | Msa0795160:CDS | 50.0% | |
TGATGCGGTGGTGATAAGGA+GGG | + | chr5_3:7055407-7055426 | Msa0795160:CDS | 50.0% | |
AATCAACTGAGCAGCCTCCA+TGG | - | chr5_3:7055436-7055455 | None:intergenic | 50.0% | |
TGCTCAGTTGATTGCGGTTG+AGG | + | chr5_3:7055443-7055462 | Msa0795160:CDS | 50.0% | |
TGCGGTTGAGGACAAGAAGA+AGG | + | chr5_3:7055455-7055474 | Msa0795160:CDS | 50.0% | |
CATTGAGGAACAACTTCCGG+CGG | + | chr5_3:7055488-7055507 | Msa0795160:intron | 50.0% | |
TCAAATTCCAACGACACCGC+CGG | - | chr5_3:7055507-7055526 | None:intergenic | 50.0% | |
GAAGGAGGACGAGAACGTAA+AGG | - | chr5_3:7055567-7055586 | None:intergenic | 50.0% | |
AACAAGTTTGTCGGGGAAGG+AGG | - | chr5_3:7055582-7055601 | None:intergenic | 50.0% | |
CAAACTCCCCAGGATTCAAC+AGG | + | chr5_3:7055814-7055833 | Msa0795160:intron | 50.0% | |
GAAGGACCTGTTGAATCCTG+GGG | - | chr5_3:7055823-7055842 | None:intergenic | 50.0% | |
GAGAAGGACCTGTTGAATCC+TGG | - | chr5_3:7055825-7055844 | None:intergenic | 50.0% | |
GGTCCTTCTCCAAGTTATGG+AGG | + | chr5_3:7055835-7055854 | Msa0795160:intron | 50.0% | |
TGGTAGTAACTGGGGTGACA+TGG | + | chr5_3:7056289-7056308 | Msa0795160:intron | 50.0% | |
!! | TGCCCTCGTGGCATTGATTA+AGG | + | chr5_3:7056658-7056677 | Msa0795160:intron | 50.0% |
GGTATGCTTAATCAGTGCCC+TGG | + | chr5_3:7056785-7056804 | Msa0795160:intron | 50.0% | |
ATGCTTAATCAGTGCCCTGG+GGG | + | chr5_3:7056788-7056807 | Msa0795160:intron | 50.0% | |
AAATGAAGGGTCCGGCTAAC+CGG | - | chr5_3:7056816-7056835 | None:intergenic | 50.0% | |
TGGCCACAATAGTTGGAGGT+AGG | + | chr5_3:7060011-7060030 | Msa0795160:intron | 50.0% | |
TGTGACACGCGACTTGAACA+CGG | - | chr5_3:7060779-7060798 | None:intergenic | 50.0% | |
GAGGAACTGCTTGTACGGTT+TGG | - | chr5_3:7060991-7061010 | None:intergenic | 50.0% | |
CTTGGGAGGAACTGCTTGTA+CGG | - | chr5_3:7060996-7061015 | None:intergenic | 50.0% | |
GCACAACCAAAGAAGAGAGC+AGG | + | chr5_3:7061030-7061049 | Msa0795160:CDS | 50.0% | |
CTTCTCCCTGCTCTCTTCTT+TGG | - | chr5_3:7061039-7061058 | None:intergenic | 50.0% | |
! | ACAAGGCATCCAGTGTATCG+AGG | + | chr5_3:7061072-7061091 | Msa0795160:CDS | 50.0% |
CTTCGTACTCCTCGATACAC+TGG | - | chr5_3:7061084-7061103 | None:intergenic | 50.0% | |
TACGGTGGAGATAAGGAGAG+CGG | + | chr5_3:7061317-7061336 | Msa0795160:CDS | 50.0% | |
! | TGTGCTAGAAGCACAGGTTC+CGG | + | chr5_3:7061434-7061453 | Msa0795160:CDS | 50.0% |
TGTTCCTACGGCGTACTCCT+CGG | - | chr5_3:7055189-7055208 | None:intergenic | 55.0% | |
!! | CGTGCAGCCATTTTAGGAGC+CGG | - | chr5_3:7055294-7055313 | None:intergenic | 55.0% |
TGCATGGTGGTTGACGTTGC+CGG | + | chr5_3:7055377-7055396 | Msa0795160:CDS | 55.0% | |
GTTGCCGGAGTCGAATGATG+CGG | + | chr5_3:7055392-7055411 | Msa0795160:CDS | 55.0% | |
ACCACCGCATCATTCGACTC+CGG | - | chr5_3:7055399-7055418 | None:intergenic | 55.0% | |
GGAGGCTGCTCAGTTGATTG+CGG | + | chr5_3:7055437-7055456 | Msa0795160:CDS | 55.0% | |
GGAGTTTGCGCACATTGAGG+CGG | - | chr5_3:7055802-7055821 | None:intergenic | 55.0% | |
TGGGGAGTTTGCGCACATTG+AGG | - | chr5_3:7055805-7055824 | None:intergenic | 55.0% | |
TCAATGTGCGCAAACTCCCC+AGG | + | chr5_3:7055804-7055823 | Msa0795160:intron | 55.0% | |
! | AAAGCTAATCGGTGCCCTCG+TGG | + | chr5_3:7056646-7056665 | Msa0795160:intron | 55.0% |
TATCAGTGTGGCAAGGGCGA+TGG | - | chr5_3:7060095-7060114 | None:intergenic | 55.0% | |
GACTTGAACACGGGGACAGT+TGG | - | chr5_3:7060769-7060788 | None:intergenic | 55.0% | |
TGACACGCGACTTGAACACG+GGG | - | chr5_3:7060777-7060796 | None:intergenic | 55.0% | |
GTGACACGCGACTTGAACAC+GGG | - | chr5_3:7060778-7060797 | None:intergenic | 55.0% | |
CAAGTCGCGTGTCACATACG+TGG | + | chr5_3:7060783-7060802 | Msa0795160:intron | 55.0% | |
CGTGCAGCCATTTCAGGAGT+TGG | - | chr5_3:7061201-7061220 | None:intergenic | 55.0% | |
TGTGCACGTGCAGCCATTTC+AGG | - | chr5_3:7061207-7061226 | None:intergenic | 55.0% | |
GCCGGAGTCTAATGATACGG+TGG | + | chr5_3:7061302-7061321 | Msa0795160:CDS | 55.0% | |
GGAGGCTGCTCAGTTGTTTG+CGG | + | chr5_3:7061344-7061363 | Msa0795160:CDS | 55.0% | |
! | TGTACCGAGGAGTACGCCGT+AGG | + | chr5_3:7055182-7055201 | Msa0795160:CDS | 60.0% |
TGCGGTGGTGATAAGGAGGG+CGG | + | chr5_3:7055410-7055429 | Msa0795160:CDS | 60.0% | |
!! | ACAACTTCCGGCGGTGTCGT+TGG | + | chr5_3:7055497-7055516 | Msa0795160:intron | 60.0% |
GACAGTCTTCGTGACGCCTC+AGG | - | chr5_3:7055767-7055786 | None:intergenic | 60.0% | |
GGCGTCACGAAGACTGTCCT+TGG | + | chr5_3:7055769-7055788 | Msa0795160:intron | 60.0% | |
TGCATGGCGGTTGACGTTGC+CGG | + | chr5_3:7061284-7061303 | Msa0795160:CDS | 60.0% | |
GGAGATAAGGAGAGCGGCGA+TGG | + | chr5_3:7061323-7061342 | Msa0795160:CDS | 60.0% | |
GATAAGGAGAGCGGCGATGG+AGG | + | chr5_3:7061326-7061345 | Msa0795160:CDS | 60.0% | |
! | GCTAGAAGCACAGGTTCCGG+TGG | + | chr5_3:7061437-7061456 | Msa0795160:CDS | 60.0% |
CGGCGTACTCCTCGGTACAC+TGG | - | chr5_3:7055181-7055200 | None:intergenic | 65.0% | |
GCCGGAGTCGAATGATGCGG+TGG | + | chr5_3:7055395-7055414 | Msa0795160:CDS | 65.0% | |
GGTGATAAGGAGGGCGGCCA+TGG | + | chr5_3:7055416-7055435 | Msa0795160:CDS | 65.0% | |
GATAAGGAGGGCGGCCATGG+AGG | + | chr5_3:7055419-7055438 | Msa0795160:CDS | 65.0% | |
! | AATCAGTGCCCTGGGGGCAC+CGG | + | chr5_3:7056794-7056813 | Msa0795160:intron | 65.0% |
CCGGCTAACCGGTGCCCCCA+GGG | - | chr5_3:7056805-7056824 | None:intergenic | 75.0% | |
!! | CCCTGGGGGCACCGGTTAGC+CGG | + | chr5_3:7056802-7056821 | Msa0795160:intron | 75.0% |
TCCGGCTAACCGGTGCCCCC+AGG | - | chr5_3:7056806-7056825 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 7055028 | 7061620 | 7055028 | ID=Msa0795160;Name=Msa0795160 |
chr5_3 | mRNA | 7055028 | 7061620 | 7055028 | ID=Msa0795160-mRNA-1;Parent=Msa0795160;Name=Msa0795160-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|352 |
chr5_3 | exon | 7055028 | 7055215 | 7055028 | ID=Msa0795160-mRNA-1:exon:2866;Parent=Msa0795160-mRNA-1 |
chr5_3 | exon | 7055272 | 7055480 | 7055272 | ID=Msa0795160-mRNA-1:exon:2867;Parent=Msa0795160-mRNA-1 |
chr5_3 | exon | 7060959 | 7061620 | 7060959 | ID=Msa0795160-mRNA-1:exon:2868;Parent=Msa0795160-mRNA-1 |
chr5_3 | CDS | 7055028 | 7055215 | 7055028 | ID=Msa0795160-mRNA-1:cds;Parent=Msa0795160-mRNA-1 |
chr5_3 | CDS | 7055272 | 7055480 | 7055272 | ID=Msa0795160-mRNA-1:cds;Parent=Msa0795160-mRNA-1 |
chr5_3 | CDS | 7060959 | 7061620 | 7060959 | ID=Msa0795160-mRNA-1:cds;Parent=Msa0795160-mRNA-1 |
Gene Sequence |
Protein sequence |