AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0832890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832890 MtrunA17_Chr5g0398091 82.727 220 21 4 150 353 11 229 5.95e-124 355
Msa0832890 MtrunA17_Chr5g0398091 85.256 156 17 2 1 151 69 223 1.27e-89 268
Msa0832890 MtrunA17_Chr5g0398061 82.587 201 19 3 169 353 24 224 1.51e-114 332
Msa0832890 MtrunA17_Chr5g0398061 85.256 156 17 2 1 151 64 218 2.86e-89 267
Msa0832890 MtrunA17_Chr5g0398081 77.941 204 26 4 168 353 24 226 8.73e-105 307
Msa0832890 MtrunA17_Chr5g0398081 81.013 158 22 4 1 151 64 220 8.12e-80 243
Msa0832890 MtrunA17_Chr1g0203861 48.571 210 84 7 156 353 8 205 3.21e-51 169
Msa0832890 MtrunA17_Chr1g0203861 43.972 141 71 3 12 149 63 198 7.08e-24 97.4
Msa0832890 MtrunA17_Chr6g0473961 48.223 197 81 5 167 351 28 215 1.01e-50 168
Msa0832890 MtrunA17_Chr6g0473961 63.636 66 24 0 12 77 73 138 3.41e-23 95.9
Msa0832890 MtrunA17_Chr6g0474001 63.910 133 37 3 152 284 17 138 1.04e-50 170
Msa0832890 MtrunA17_Chr6g0474001 41.497 147 64 5 12 148 73 207 2.15e-23 97.8
Msa0832890 MtrunA17_Chr6g0473981 57.143 154 55 3 152 305 17 159 1.41e-50 169
Msa0832890 MtrunA17_Chr6g0473981 63.636 66 24 0 12 77 73 138 9.93e-23 95.5
Msa0832890 MtrunA17_Chr4g0057231 76.724 116 19 3 162 275 13 122 6.00e-50 164
Msa0832890 MtrunA17_Chr4g0057231 73.913 69 10 2 1 68 61 122 3.94e-26 102
Msa0832890 MtrunA17_Chr6g0473781 44.550 211 76 4 168 351 31 227 7.84e-49 164
Msa0832890 MtrunA17_Chr6g0473781 65.152 66 23 0 12 77 76 141 2.99e-23 96.3
Msa0832890 MtrunA17_Chr6g0473741 48.095 210 87 6 157 353 30 230 1.02e-48 164
Msa0832890 MtrunA17_Chr6g0473741 65.152 66 23 0 12 77 85 150 1.12e-22 95.1
Msa0832890 MtrunA17_Chr6g0473971 57.516 153 54 3 153 305 18 159 1.11e-48 164
Msa0832890 MtrunA17_Chr6g0473971 41.611 149 62 6 12 148 73 208 1.86e-21 92.0
Msa0832890 MtrunA17_Chr6g0473931 66.964 112 31 1 173 284 12 117 3.54e-46 156
Msa0832890 MtrunA17_Chr6g0473931 66.667 66 22 0 12 77 52 117 2.93e-23 95.9
Msa0832890 MtrunA17_Chr6g0473881 63.566 129 40 2 156 284 73 194 4.50e-46 159
Msa0832890 MtrunA17_Chr6g0473881 63.636 66 24 0 12 77 129 194 3.58e-20 89.7
Msa0832890 MtrunA17_Chr6g0473941 69.444 108 27 1 177 284 16 117 6.85e-43 147
Msa0832890 MtrunA17_Chr6g0473941 68.182 66 21 0 12 77 52 117 7.84e-21 89.4
Msa0832890 MtrunA17_Chr6g0473771 60.784 102 34 1 166 267 15 110 1.31e-36 128
Msa0832890 MtrunA17_Chr6g0473771 63.636 55 20 0 12 66 62 116 1.79e-17 77.4
Msa0832890 MtrunA17_Chr6g0473861 62.500 120 38 2 165 284 35 147 8.92e-36 131
Msa0832890 MtrunA17_Chr6g0473861 65.152 66 23 0 12 77 82 147 2.08e-21 92.4
Msa0832890 MtrunA17_Chr6g0473791 66.250 80 21 1 168 247 31 104 4.50e-30 112
Msa0832890 MtrunA17_Chr2g0321071 61.053 95 31 2 188 281 41 130 1.80e-29 113
Msa0832890 MtrunA17_Chr2g0321071 62.295 61 23 0 14 74 70 130 2.57e-15 74.3
Msa0832890 MtrunA17_Chr5g0399441 50.000 126 56 2 190 314 24 143 2.64e-28 108
Msa0832890 MtrunA17_Chr5g0399441 45.192 104 48 1 14 117 49 143 8.07e-17 77.4
Msa0832890 MtrunA17_Chr7g0265851 61.176 85 27 1 190 274 20 98 1.43e-26 104
Msa0832890 MtrunA17_Chr7g0265851 61.538 52 20 0 16 67 47 98 6.30e-13 67.0
Msa0832890 MtrunA17_Chr3g0140161 56.842 95 35 1 189 283 38 126 3.17e-26 103
Msa0832890 MtrunA17_Chr3g0140161 58.730 63 26 0 14 76 64 126 5.19e-15 72.8
Msa0832890 MtrunA17_Chr8g0334801 53.608 97 39 1 178 274 36 126 7.57e-25 100
Msa0832890 MtrunA17_Chr8g0334801 66.667 54 18 0 14 67 73 126 9.83e-15 72.4
Msa0832890 MtrunA17_Chr8g0390091 53.043 115 43 3 172 283 14 120 1.40e-24 100
Msa0832890 MtrunA17_Chr8g0390091 61.111 54 21 0 14 67 58 111 1.10e-13 69.7
Msa0832890 MtrunA17_Chr7g0232261 53.608 97 39 1 178 274 45 135 1.18e-23 97.8
Msa0832890 MtrunA17_Chr7g0232261 64.815 54 19 0 14 67 82 135 7.51e-14 70.5
Msa0832890 MtrunA17_Chr7g0275841 54.651 86 33 1 189 274 23 102 2.10e-23 95.5
Msa0832890 MtrunA17_Chr7g0275841 51.786 56 27 0 12 67 47 102 1.94e-11 62.0
Msa0832890 MtrunA17_Chr6g0486701 57.895 95 34 1 191 285 41 129 5.49e-23 95.5
Msa0832890 MtrunA17_Chr6g0486701 61.538 65 25 0 14 78 65 129 2.48e-13 68.6
Msa0832890 MtrunA17_Chr8g0340311 52.525 99 41 1 190 288 43 135 1.06e-22 94.4
Msa0832890 MtrunA17_Chr8g0340311 80.556 36 7 0 13 48 67 102 1.65e-12 65.9
Msa0832890 MtrunA17_Chr2g0331231 57.143 84 30 1 191 274 38 115 1.35e-22 94.0
Msa0832890 MtrunA17_Chr2g0331231 71.739 46 13 0 13 58 61 106 6.77e-14 69.7
Msa0832890 MtrunA17_Chr4g0057241 40.936 171 78 6 190 351 11 167 3.12e-22 92.0
Msa0832890 MtrunA17_Chr4g0057241 63.462 52 19 0 16 67 37 88 1.17e-13 68.2
Msa0832890 MtrunA17_Chr8g0346741 52.273 88 33 2 177 264 25 103 1.81e-20 87.4
Msa0832890 MtrunA17_Chr4g0055951 63.235 68 19 1 192 259 72 133 4.16e-20 88.6
Msa0832890 MtrunA17_Chr4g0055951 76.923 39 9 0 14 52 95 133 1.74e-12 66.6
Msa0832890 MtrunA17_Chr6g0486711 53.191 94 38 1 190 283 45 132 6.43e-17 79.0
Msa0832890 MtrunA17_Chr1g0146191 68.182 66 15 1 190 255 43 102 9.97e-16 76.3
Msa0832890 MtrunA17_Chr4g0017851 44.944 89 43 1 193 281 117 199 1.38e-15 76.6
Msa0832890 MtrunA17_Chr1g0150631 32.075 159 90 4 193 351 37 177 3.11e-15 74.3
Msa0832890 MtrunA17_Chr5g0396191 54.545 88 34 1 194 281 11 92 3.37e-15 73.2
Msa0832890 MtrunA17_Chr3g0134161 37.500 120 61 4 163 280 16 123 3.42e-14 70.1
Msa0832890 MtrunA17_Chr5g0396181 48.352 91 41 1 194 284 21 105 3.92e-14 70.1
Msa0832890 MtrunA17_Chr1g0150661 32.278 158 79 4 153 303 6 142 9.21e-14 69.7
Msa0832890 MtrunA17_Chr1g0150671 37.168 113 64 2 193 305 45 150 1.98e-13 69.7
Msa0832890 MtrunA17_Chr1g0153151 54.839 62 22 1 194 255 44 99 2.20e-13 67.8
Msa0832890 MtrunA17_Chr2g0295421 39.216 102 54 2 159 258 59 154 2.31e-13 69.3
Msa0832890 MtrunA17_Chr3g0115631 44.828 87 39 3 170 255 127 205 3.73e-13 69.7
Msa0832890 MtrunA17_Chr1g0196781 47.761 67 29 1 189 255 147 207 3.76e-13 69.3
Msa0832890 MtrunA17_Chr5g0401871 53.226 62 23 1 194 255 25 80 5.99e-13 66.6
Msa0832890 MtrunA17_Chr1g0150691 50.794 63 25 1 193 255 21 77 8.40e-13 67.0
Msa0832890 MtrunA17_Chr5g0437671 54.688 64 23 1 194 257 85 142 8.57e-13 68.9
Msa0832890 MtrunA17_Chr2g0334031 36.364 110 61 2 150 259 76 176 9.29e-13 68.6
Msa0832890 MtrunA17_Chr5g0396301 53.030 66 23 2 194 257 18 77 1.42e-12 65.1
Msa0832890 MtrunA17_Chr2g0324131 49.231 65 27 1 193 257 217 275 2.15e-12 67.8
Msa0832890 MtrunA17_Chr2g0301171 40.449 89 47 1 193 281 18 100 2.96e-12 65.1
Msa0832890 MtrunA17_Chr2g0301191 39.326 89 48 1 193 281 18 100 3.28e-12 65.1
Msa0832890 MtrunA17_Chr3g0136551 38.043 92 51 1 194 285 65 150 5.15e-12 65.5
Msa0832890 MtrunA17_Chr1g0179161 40.230 87 26 1 176 262 1 61 5.67e-12 63.5
Msa0832890 MtrunA17_Chr5g0425561 44.444 90 41 3 166 255 148 228 6.83e-12 66.2
Msa0832890 MtrunA17_Chr7g0225131 46.970 66 26 2 193 258 28 84 7.05e-12 61.2
Msa0832890 MtrunA17_Chr8g0382491 49.206 63 26 1 193 255 112 168 9.99e-12 64.7
Msa0832890 MtrunA17_Chr2g0301181 39.326 89 48 1 193 281 18 100 1.19e-11 63.9
Msa0832890 MtrunA17_Chr7g0221471 48.485 66 28 1 190 255 47 106 1.35e-11 62.8
Msa0832890 MtrunA17_Chr7g0221501 37.500 104 56 3 153 255 11 106 1.65e-11 62.4
Msa0832890 MtrunA17_Chr1g0158971 40.909 88 41 2 194 281 115 191 1.71e-11 64.7
Msa0832890 MtrunA17_Chr2g0283171 34.091 132 68 5 125 255 6 119 2.00e-11 61.6
Msa0832890 MtrunA17_Chr5g0396171 44.928 69 32 1 196 264 26 88 2.29e-11 59.7
Msa0832890 MtrunA17_Chr8g0335331 51.613 62 25 1 194 255 125 181 3.22e-11 62.0
Msa0832890 MtrunA17_Chr4g0046161 46.377 69 32 1 187 255 50 113 3.60e-11 60.1
Msa0832890 MtrunA17_Chr2g0283181 42.045 88 43 2 171 255 123 205 5.10e-11 62.8
Msa0832890 MtrunA17_Chr1g0195151 44.286 70 33 1 186 255 69 132 5.11e-11 62.8
Msa0832890 MtrunA17_Chr7g0250721 34.921 126 63 3 135 255 6 117 5.65e-11 61.6
Msa0832890 MtrunA17_Chr7g0250731 50.000 62 26 1 194 255 61 117 6.30e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832890 AT1G63030.2 50.857 175 80 1 177 351 13 181 8.60e-56 181
Msa0832890 AT1G63030.2 45.588 136 56 3 13 144 50 171 9.57e-27 105
Msa0832890 AT1G63030.1 50.857 175 80 1 177 351 13 181 8.60e-56 181
Msa0832890 AT1G63030.1 45.588 136 56 3 13 144 50 171 9.57e-27 105
Msa0832890 AT1G12610.1 48.598 214 69 6 168 351 5 207 2.99e-53 175
Msa0832890 AT1G12610.1 67.105 76 24 1 12 87 49 123 1.81e-26 105
Msa0832890 AT4G25470.1 43.404 235 80 7 143 351 9 216 1.00e-49 166
Msa0832890 AT4G25470.1 61.176 85 31 1 12 94 70 154 6.65e-26 103
Msa0832890 AT5G51990.1 61.940 134 45 1 154 287 14 141 1.99e-48 163
Msa0832890 AT5G51990.1 69.863 73 22 0 12 84 73 145 5.71e-26 103
Msa0832890 AT4G25480.1 46.364 220 90 6 150 351 7 216 3.54e-46 157
Msa0832890 AT4G25480.1 57.000 100 36 3 12 108 70 165 9.62e-23 95.1
Msa0832890 AT4G25490.1 47.179 195 79 5 173 351 27 213 7.09e-42 145
Msa0832890 AT4G25490.1 61.176 85 31 1 12 94 67 151 1.30e-22 94.7
Msa0832890 AT5G25810.1 58.511 94 33 1 190 283 32 119 4.02e-28 109
Msa0832890 AT5G25810.1 59.375 64 26 0 13 76 56 119 3.93e-16 77.0
Msa0832890 AT5G11590.1 49.593 123 55 2 161 283 19 134 1.66e-26 105
Msa0832890 AT5G11590.1 57.812 64 27 0 13 76 71 134 3.51e-15 74.7
Msa0832890 AT2G44940.1 57.609 92 33 1 190 281 96 181 1.11e-23 99.8
Msa0832890 AT2G44940.1 63.934 61 22 0 14 74 121 181 2.10e-14 73.2
Msa0832890 AT4G16750.1 45.528 123 56 2 152 274 3 114 4.72e-23 95.1
Msa0832890 AT4G16750.1 66.667 54 18 0 14 67 61 114 2.72e-15 73.6
Msa0832890 AT4G32800.1 53.191 94 38 1 190 283 15 102 7.22e-23 95.5
Msa0832890 AT4G32800.1 55.556 63 28 0 14 76 40 102 2.24e-13 68.9
Msa0832890 AT2G35700.1 55.814 86 32 1 189 274 40 119 1.44e-22 94.0
Msa0832890 AT2G35700.1 45.536 112 54 2 12 119 64 172 1.06e-14 72.4
Msa0832890 AT1G01250.1 44.444 117 58 2 159 274 9 119 7.99e-21 89.4
Msa0832890 AT2G36450.1 59.494 79 25 2 190 267 11 83 1.96e-20 88.2
Msa0832890 AT3G16280.1 52.941 85 34 1 190 274 57 135 2.16e-20 89.4
Msa0832890 AT3G16280.2 52.941 85 34 1 190 274 75 153 2.97e-20 89.4
Msa0832890 AT3G60490.1 51.546 97 40 2 179 274 55 145 2.42e-19 86.7
Msa0832890 AT3G60490.1 70.213 47 14 0 14 60 92 138 2.39e-12 66.6
Msa0832890 AT2G25820.1 56.098 82 30 1 193 274 25 100 7.32e-19 84.7
Msa0832890 AT2G25820.1 61.818 55 21 0 13 67 46 100 4.93e-12 65.5
Msa0832890 AT5G52020.1 47.500 120 56 2 190 309 61 173 8.04e-19 84.7
Msa0832890 AT1G71450.1 42.308 104 54 1 193 296 23 120 6.15e-18 81.3
Msa0832890 AT1G71450.1 35.338 133 74 2 12 144 43 163 3.65e-13 67.8
Msa0832890 AT1G74930.1 41.758 91 47 1 194 284 21 105 2.68e-15 73.9
Msa0832890 AT2G23340.1 45.745 94 39 2 194 281 28 115 3.11e-15 73.6
Msa0832890 AT1G46768.3 55.072 69 24 2 189 257 27 88 3.30e-15 72.4
Msa0832890 AT1G46768.1 48.387 93 37 3 189 281 27 108 3.37e-15 72.8
Msa0832890 AT1G46768.2 48.387 93 37 3 189 281 27 108 3.37e-15 72.8
Msa0832890 AT1G19210.1 43.434 99 46 2 194 292 12 100 3.89e-15 73.2
Msa0832890 AT3G50260.1 43.158 95 47 2 187 281 14 101 7.97e-15 71.6
Msa0832890 AT4G13620.1 38.679 106 58 2 158 262 195 294 1.27e-14 74.7
Msa0832890 AT1G21910.1 54.545 66 24 1 194 259 50 109 2.72e-14 72.0
Msa0832890 AT4G36900.1 50.704 71 29 1 185 255 21 85 2.92e-14 71.2
Msa0832890 AT2G47520.1 42.222 90 41 2 171 255 22 105 4.41e-14 70.1
Msa0832890 AT5G67190.1 39.286 112 46 4 194 294 21 121 5.77e-14 70.1
Msa0832890 AT1G77200.1 54.348 92 36 1 192 283 41 126 9.82e-14 70.5
Msa0832890 AT1G22190.1 46.835 79 34 2 179 257 70 140 1.07e-13 70.9
Msa0832890 AT4G39780.1 49.254 67 28 1 189 255 88 148 1.97e-13 70.1
Msa0832890 AT2G22200.1 50.794 63 25 1 193 255 70 126 5.11e-13 68.9
Msa0832890 AT4G31060.1 48.387 62 26 1 194 255 27 82 5.53e-13 67.4
Msa0832890 AT1G33760.1 48.352 91 41 1 194 284 20 104 6.41e-13 67.0
Msa0832890 AT1G36060.1 52.381 63 24 1 193 255 142 198 8.54e-13 68.9
Msa0832890 AT4G06746.1 47.059 68 30 1 194 261 36 97 1.08e-12 65.5
Msa0832890 AT2G20880.1 40.449 89 45 2 169 257 164 244 1.44e-12 68.2
Msa0832890 AT2G44840.1 54.839 62 23 1 194 255 92 148 3.58e-12 65.9
Msa0832890 AT3G16770.1 39.130 92 50 1 166 257 51 136 3.99e-12 65.9
Msa0832890 AT5G43410.1 44.737 76 35 2 180 255 3 71 5.04e-12 63.2
Msa0832890 AT5G65130.1 47.692 65 28 1 193 257 110 168 5.96e-12 65.9
Msa0832890 AT5G65130.2 47.692 65 28 1 193 257 112 170 6.01e-12 65.9
Msa0832890 AT1G78080.1 50.794 63 25 1 193 255 151 207 7.64e-12 66.2
Msa0832890 AT4G28140.1 47.692 65 28 1 193 257 142 200 9.82e-12 65.5
Msa0832890 AT1G12630.1 48.454 97 34 3 171 267 5 85 1.21e-11 63.5
Msa0832890 AT1G72360.3 36.522 115 55 3 144 255 30 129 1.36e-11 64.7
Msa0832890 AT5G21960.1 46.970 66 29 1 192 257 5 64 1.42e-11 63.9
Msa0832890 AT5G07580.1 44.872 78 36 2 188 265 106 176 5.77e-11 62.0
Msa0832890 AT5G61600.1 51.515 66 25 2 190 255 86 144 6.03e-11 62.4
Msa0832890 AT3G23230.1 50.000 62 26 1 194 255 20 76 7.78e-11 60.1

Find 89 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGGGAGAAGGGTGTTTA+AGG 0.128785 5_4:+6038397 Msa0832890:CDS
CTTCTCCCTGCTCTCTTCTT+TGG 0.153724 5_4:-6038386 None:intergenic
CGTTGAAGATGGAGTATTTA+TGG 0.178815 5_4:+6033122 Msa0832890:CDS
GTTGCTGCACTTGCTCTTAA+AGG 0.198231 5_4:+6032961 Msa0832890:CDS
GTTGCTGCACTTGCTCTTAA+AGG 0.198231 5_4:+6038578 Msa0832890:CDS
AAGTTCCTCAGAAGTGATTT+TGG 0.245839 5_4:+6038349 Msa0832890:CDS
CCTCCTTCCCCAACAAATTA+TGG 0.257840 5_4:+6038830 Msa0832890:CDS
CAAATTATGGTAGTTATAAC+TGG 0.271221 5_4:+6038843 Msa0832890:CDS
TGTGCACGTGCAGCCATTTC+AGG 0.278245 5_4:-6032934 None:intergenic
TGTGCACGTGCAGCCATTTC+AGG 0.278245 5_4:-6038551 None:intergenic
CTGTGCTTCTAGCACATTCT+TGG 0.281396 5_4:-6033157 None:intergenic
TGCTAAAATGTTTGCGGTTG+AGG 0.320688 5_4:+6038697 Msa0832890:CDS
TATAACTACCATAATTTGTT+GGG 0.332163 5_4:-6038838 None:intergenic
GAAACAATAAGTCAAGGATT+TGG 0.359548 5_4:+6032893 Msa0832890:CDS
AAAACAATAAGTCAAGGATT+TGG 0.365596 5_4:+6038510 Msa0832890:CDS
TTTCTGTTAACGTTATTGTT+AGG 0.370807 5_4:-6032874 None:intergenic
TTGATACTCAGGTTTCACTA+TGG 0.394923 5_4:+6038882 Msa0832890:CDS
TGGTAGTAACTACGATGATA+TGG 0.397522 5_4:+6033281 Msa0832890:CDS
TTACTACCATTGTAATTTGT+AGG 0.404075 5_4:-6033267 None:intergenic
TGCATGGCGGTTGACGTTGC+CGG 0.406208 5_4:+6033014 Msa0832890:CDS
TGCATGGCGGTTGACGTTGC+CGG 0.406208 5_4:+6038631 Msa0832890:CDS
GAAGAAGGAACAATAACAAA+TGG 0.418693 5_4:+6038450 Msa0832890:CDS
TACTACCATTGTAATTTGTA+GGG 0.419201 5_4:-6033266 None:intergenic
GTTCATTGAGGAACAAGTTC+CGG 0.422163 5_4:+6038736 Msa0832890:CDS
CGAATGATGCGGCGGAGATA+AGG 0.424020 5_4:+6038657 Msa0832890:CDS
AACATATCCAACTCCTGAAA+TGG 0.444364 5_4:+6032921 Msa0832890:CDS
AACATATCCAACTCCTGAAA+TGG 0.444364 5_4:+6038538 Msa0832890:CDS
TCTGAGGAACTTGTACGGTT+TGG 0.448003 5_4:-6038338 None:intergenic
CATGGAGATATTTGATACTC+AGG 0.454117 5_4:+6038871 Msa0832890:CDS
CGTGCAGCCATTTCAGGAGT+TGG 0.460218 5_4:-6032928 None:intergenic
CGTGCAGCCATTTCAGGAGT+TGG 0.460218 5_4:-6038545 None:intergenic
GGAGATAAGGAGGGCGGCCA+TGG 0.460779 5_4:+6038670 Msa0832890:CDS
TTATAACTACCATAATTTGT+TGG 0.467212 5_4:-6038839 None:intergenic
TGTGCTAGAAGCACAGGTTC+CGG 0.470245 5_4:+6033164 Msa0832890:CDS
AGCAGAACGTAGAGGCTCAT+TGG 0.471475 5_4:-6038807 None:intergenic
CTAATGATACGGTGGAGATA+AGG 0.490158 5_4:+6033040 Msa0832890:CDS
TGTTGTGTTACCGTTGAAGA+TGG 0.492239 5_4:+6033111 Msa0832890:CDS
CCATAATTTGTTGGGGAAGG+AGG 0.492901 5_4:-6038830 None:intergenic
GGAGATAAGGAGAGCGGCGA+TGG 0.502163 5_4:+6033053 Msa0832890:CDS
CAAAGAAGAGAGCAGGGAGA+AGG 0.505022 5_4:+6038387 Msa0832890:CDS
CAAGAATGTGCTAGAAGCAC+AGG 0.506339 5_4:+6033158 Msa0832890:CDS
AATAAGTCAAGGATTTGGCT+TGG 0.507380 5_4:+6032898 Msa0832890:CDS
AATAAGTCAAGGATTTGGCT+TGG 0.507380 5_4:+6038515 Msa0832890:CDS
AATTTGCCAAAGAAGAGAGC+AGG 0.515612 5_4:+6038380 Msa0832890:CDS
AAGAAGGAACAATAACAAAT+GGG 0.519116 5_4:+6038451 Msa0832890:CDS
GGAGGCTGCTCAGTTGTTTG+CGG 0.520166 5_4:+6033074 Msa0832890:CDS
AAAGAAGAGAGCAGGGAGAA+GGG 0.521556 5_4:+6038388 Msa0832890:CDS
CTACCATAATTTGTTGGGGA+AGG 0.538402 5_4:-6038833 None:intergenic
CCATTGTAATTTGTAGGGGA+AGG 0.540315 5_4:-6033261 None:intergenic
CTGTTAACGTTATTGTTAGG+AGG 0.541118 5_4:-6032871 None:intergenic
TTGTAATTTGTAGGGGAAGG+AGG 0.542013 5_4:-6033258 None:intergenic
TGTATCGAGGAGTACGAAGA+AGG 0.543663 5_4:+6038435 Msa0832890:CDS
CATAAATACTCCATCTTCAA+CGG 0.545272 5_4:-6033121 None:intergenic
GGAGGCTGCTAAAATGTTTG+CGG 0.547515 5_4:+6038691 Msa0832890:CDS
AGATGGAGTATTTATGGACA+TGG 0.547842 5_4:+6033128 Msa0832890:CDS
TAGTTATAACTGGGGTGACA+TGG 0.558776 5_4:+6038853 Msa0832890:CDS
TCAAATTCCGACGACACCGC+CGG 0.565367 5_4:-6038755 None:intergenic
GATAAGGAGGGCGGCCATGG+AGG 0.569228 5_4:+6038673 Msa0832890:CDS
GTTTAAGGAGACAAGACATC+CGG 0.575697 5_4:+6038412 Msa0832890:CDS
AAATTATGGTAGTTATAACT+GGG 0.579912 5_4:+6038844 Msa0832890:CDS
GTTTGCGGTTGAGGACAAGA+AGG 0.582429 5_4:+6038706 Msa0832890:CDS
TCACTTCTGAGGAACTTGTA+CGG 0.586438 5_4:-6038343 None:intergenic
ACAAGTTCCGGCGGTGTCGT+CGG 0.587246 5_4:+6038748 Msa0832890:CDS
GAAGGAGGATTAGAACGTAA+AGG 0.587355 5_4:-6033243 None:intergenic
GATAAGGAGAGCGGCGATGG+AGG 0.595614 5_4:+6033056 Msa0832890:CDS
ATGATGCGGCGGAGATAAGG+AGG 0.600683 5_4:+6038660 Msa0832890:CDS
ATTTGCCAAAGAAGAGAGCA+GGG 0.607930 5_4:+6038381 Msa0832890:CDS
GAAGGATAGTATGTTCATTG+AGG 0.609059 5_4:+6038724 Msa0832890:CDS
ATAACTACCATAATTTGTTG+GGG 0.610998 5_4:-6038837 None:intergenic
ACTACCATTGTAATTTGTAG+GGG 0.622305 5_4:-6033265 None:intergenic
TCAAATTCTGATGACACCAC+CGG 0.625258 5_4:-6033183 None:intergenic
GTTGCCGGAGTCTAATGATA+CGG 0.626022 5_4:+6033029 Msa0832890:CDS
ACAAGACATCCGGTGTATCG+AGG 0.630846 5_4:+6038422 Msa0832890:CDS
TTAACAGAAACAATAAGTCA+AGG 0.635306 5_4:+6032887 Msa0832890:CDS
TGATGCCAAAATCACTTCTG+AGG 0.635581 5_4:-6038354 None:intergenic
GCCGGAGTCGAATGATGCGG+CGG 0.646749 5_4:+6038649 Msa0832890:CDS
CTTCGTACTCCTCGATACAC+CGG 0.651638 5_4:-6038431 None:intergenic
CATTGAGGAACAAGTTCCGG+CGG 0.656816 5_4:+6038739 Msa0832890:CDS
TCCGCCGCATCATTCGACTC+CGG 0.660450 5_4:-6038650 None:intergenic
CCTTCCCCTACAAATTACAA+TGG 0.665071 5_4:+6033261 Msa0832890:CDS
GCTAGAAGCACAGGTTCCGG+TGG 0.665455 5_4:+6033167 Msa0832890:CDS
GAAGGAGGAGCAGAACGTAG+AGG 0.666556 5_4:-6038815 None:intergenic
TGATGCGGCGGAGATAAGGA+GGG 0.673723 5_4:+6038661 Msa0832890:CDS
TACGGTGGAGATAAGGAGAG+CGG 0.678233 5_4:+6033047 Msa0832890:CDS
TGCGGCGGAGATAAGGAGGG+CGG 0.678855 5_4:+6038664 Msa0832890:CDS
GTTGCCGGAGTCGAATGATG+CGG 0.679657 5_4:+6038646 Msa0832890:CDS
GCCGGAGTCTAATGATACGG+TGG 0.705686 5_4:+6033032 Msa0832890:CDS
TCCACCGTATCATTAGACTC+CGG 0.706319 5_4:-6033033 None:intergenic
AATTATGGTAGTTATAACTG+GGG 0.706472 5_4:+6038845 Msa0832890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAAAAAAAAATTATA+TGG - chr5_4:6034356-6034375 None:intergenic 0.0%
!! TTAAAAAAAATAAAAATTTA+GGG - chr5_4:6034860-6034879 None:intergenic 0.0%
!! TTTAAAAAAAATAAAAATTT+AGG - chr5_4:6034861-6034880 None:intergenic 0.0%
!!! TTTTATATAATTTTAATTTT+AGG + chr5_4:6037279-6037298 Msa0832890:intron 0.0%
!! TCAATATAATTTCTTATAAT+CGG + chr5_4:6033577-6033596 Msa0832890:intron 10.0%
!!! ATAAATATATTTTACGAAAA+AGG - chr5_4:6034725-6034744 None:intergenic 10.0%
!! TAGAATGTTAAAAAATTATA+TGG - chr5_4:6035018-6035037 None:intergenic 10.0%
!!! TAACATGATTATATATTTTT+TGG + chr5_4:6035351-6035370 Msa0832890:intron 10.0%
!! ATGACAAAAAAAAAAAAAAG+AGG - chr5_4:6033555-6033574 None:intergenic 15.0%
!!! GTTTTTCAATTACAATTAAA+TGG + chr5_4:6034487-6034506 Msa0832890:intron 15.0%
!! AAAATAGTGTATTAAAAATC+AGG - chr5_4:6034678-6034697 None:intergenic 15.0%
!!! ATGTTGTTTTTTTTATATTG+TGG - chr5_4:6035067-6035086 None:intergenic 15.0%
!! ATATCATTTATATTGTTATG+AGG + chr5_4:6035443-6035462 Msa0832890:intron 15.0%
!!! AAGAAAATTTTTTAAGTGTT+GGG + chr5_4:6035720-6035739 Msa0832890:intron 15.0%
!!! ATCTAATTTTATTAGAAAGA+GGG - chr5_4:6036275-6036294 None:intergenic 15.0%
!!! AAATCATTTTTTGTTGAAAT+CGG + chr5_4:6036840-6036859 Msa0832890:intron 15.0%
!!! ATTGAATTTTAACAGAAAAT+GGG - chr5_4:6036985-6037004 None:intergenic 15.0%
!!! AATTGAATTTTAACAGAAAA+TGG - chr5_4:6036986-6037005 None:intergenic 15.0%
!! ACGAATTTATTTAGATAAAA+TGG + chr5_4:6037311-6037330 Msa0832890:intron 15.0%
!!! ATGTTGTTCTAAAAATAAAT+GGG - chr5_4:6037624-6037643 None:intergenic 15.0%
!!! AATGTTGTTCTAAAAATAAA+TGG - chr5_4:6037625-6037644 None:intergenic 15.0%
!!! ACTACACTATTTTTTTAGTT+AGG + chr5_4:6033354-6033373 Msa0832890:intron 20.0%
!! AAATGGCTCAAAAATTATAT+TGG + chr5_4:6034504-6034523 Msa0832890:intron 20.0%
!!! AGTTGTTTCTTAAGAAAAAT+AGG - chr5_4:6034923-6034942 None:intergenic 20.0%
!! ATATTATTATGCATGAATGT+TGG - chr5_4:6035313-6035332 None:intergenic 20.0%
!! TTGATCAAACTTCATTTATT+TGG - chr5_4:6035669-6035688 None:intergenic 20.0%
!!! GAAGAAAATTTTTTAAGTGT+TGG + chr5_4:6035719-6035738 Msa0832890:intron 20.0%
!!! GATCTAATTTTATTAGAAAG+AGG - chr5_4:6036276-6036295 None:intergenic 20.0%
!! AGTGAAAAAAATTGTCATAT+AGG - chr5_4:6036517-6036536 None:intergenic 20.0%
!!! AAAAAACACTTTTTTGGTTT+TGG + chr5_4:6036946-6036965 Msa0832890:intron 20.0%
!!! AAAAACACTTTTTTGGTTTT+GGG + chr5_4:6036947-6036966 Msa0832890:intron 20.0%
!! TTGATCATAACACTTTATTA+TGG + chr5_4:6037157-6037176 Msa0832890:intron 20.0%
!! TATTTAGATAAAATGGAATG+AGG + chr5_4:6037318-6037337 Msa0832890:intron 20.0%
!!! TTCAATTATTTTAATGCTGA+GGG - chr5_4:6037970-6037989 None:intergenic 20.0%
!!! ATTCAATTATTTTAATGCTG+AGG - chr5_4:6037971-6037990 None:intergenic 20.0%
!! TCAGCATTAAAATAATTGAA+TGG + chr5_4:6037970-6037989 Msa0832890:intron 20.0%
!! GTTTATATAGATTATTGATG+AGG - chr5_4:6038179-6038198 None:intergenic 20.0%
!!! TTTTTGTTAACGTTATTGTT+AGG - chr5_4:6038494-6038513 None:intergenic 20.0%
!! TTAACAAAAACAATAAGTCA+AGG + chr5_4:6038504-6038523 Msa0832890:CDS 20.0%
!!! TATAACTACCATAATTTGTT+GGG - chr5_4:6038841-6038860 None:intergenic 20.0%
!!! TTATAACTACCATAATTTGT+TGG - chr5_4:6038842-6038861 None:intergenic 20.0%
!! AAATTATGGTAGTTATAACT+GGG + chr5_4:6038844-6038863 Msa0832890:CDS 20.0%
! TTTCTGTTAACGTTATTGTT+AGG - chr5_4:6032877-6032896 None:intergenic 25.0%
! TTAACAGAAACAATAAGTCA+AGG + chr5_4:6032887-6032906 Msa0832890:CDS 25.0%
!! TACTACCATTGTAATTTGTA+GGG - chr5_4:6033269-6033288 None:intergenic 25.0%
!! TTACTACCATTGTAATTTGT+AGG - chr5_4:6033270-6033289 None:intergenic 25.0%
!!! CACACGTATTTTTTATTTGT+TGG + chr5_4:6033405-6033424 Msa0832890:intron 25.0%
! AAAGAGTTGTACAATATGAA+TGG + chr5_4:6033642-6033661 Msa0832890:intron 25.0%
! ATAGTATAGTACAAGAAAGT+TGG - chr5_4:6034548-6034567 None:intergenic 25.0%
! TGATATGTTGTAAAATATGC+TGG - chr5_4:6035414-6035433 None:intergenic 25.0%
!! TCCTTTTGAATTTTCAACAT+TGG + chr5_4:6035981-6036000 Msa0832890:intron 25.0%
! ATTGTTGAACAATGTTCTTT+GGG - chr5_4:6036331-6036350 None:intergenic 25.0%
! AATTGTTGAACAATGTTCTT+TGG - chr5_4:6036332-6036351 None:intergenic 25.0%
! GAATTATGTTAGAAGATAGA+GGG - chr5_4:6036366-6036385 None:intergenic 25.0%
! TGAATTATGTTAGAAGATAG+AGG - chr5_4:6036367-6036386 None:intergenic 25.0%
! CTATATTAATGATGTGATAG+AGG - chr5_4:6036444-6036463 None:intergenic 25.0%
! AAAAAATTGTCATATAGGCA+GGG - chr5_4:6036512-6036531 None:intergenic 25.0%
! AAAAAAATTGTCATATAGGC+AGG - chr5_4:6036513-6036532 None:intergenic 25.0%
!! ACTACTTAACAATCGATTTA+TGG - chr5_4:6036766-6036785 None:intergenic 25.0%
! TAACACTTTATTATGGTAGT+TGG + chr5_4:6037164-6037183 Msa0832890:intron 25.0%
! AACACTTTATTATGGTAGTT+GGG + chr5_4:6037165-6037184 Msa0832890:intron 25.0%
!! CGTGCTTTATTATCTTTATT+TGG - chr5_4:6037693-6037712 None:intergenic 25.0%
!! CCATTATTTGAATTTAGCTT+GGG - chr5_4:6038259-6038278 None:intergenic 25.0%
! TCCATTATTTGAATTTAGCT+TGG - chr5_4:6038260-6038279 None:intergenic 25.0%
! AAGAAGGAACAATAACAAAT+GGG + chr5_4:6038451-6038470 Msa0832890:CDS 25.0%
! AAAACAATAAGTCAAGGATT+TGG + chr5_4:6038510-6038529 Msa0832890:CDS 25.0%
!!! ATAACTACCATAATTTGTTG+GGG - chr5_4:6038840-6038859 None:intergenic 25.0%
! CAAATTATGGTAGTTATAAC+TGG + chr5_4:6038843-6038862 Msa0832890:CDS 25.0%
! AATTATGGTAGTTATAACTG+GGG + chr5_4:6038845-6038864 Msa0832890:CDS 25.0%
GAAACAATAAGTCAAGGATT+TGG + chr5_4:6032893-6032912 Msa0832890:CDS 30.0%
CATAAATACTCCATCTTCAA+CGG - chr5_4:6033124-6033143 None:intergenic 30.0%
! ACTACCATTGTAATTTGTAG+GGG - chr5_4:6033268-6033287 None:intergenic 30.0%
! CATTTGAAATGAGTGATTCA+AGG + chr5_4:6033723-6033742 Msa0832890:intron 30.0%
AACATTACTCAAATTGCTCT+TGG - chr5_4:6033759-6033778 None:intergenic 30.0%
! GAGCAATTTGAGTAATGTTT+TGG + chr5_4:6033760-6033779 Msa0832890:intron 30.0%
GATAGAGACTTCTAATTGTT+GGG - chr5_4:6033791-6033810 None:intergenic 30.0%
TGATAGAGACTTCTAATTGT+TGG - chr5_4:6033792-6033811 None:intergenic 30.0%
!!! GAATCCAATACTTTTGGAAT+TGG - chr5_4:6033856-6033875 None:intergenic 30.0%
TTGTTGAGGCAAAGATTAAT+GGG - chr5_4:6033881-6033900 None:intergenic 30.0%
TTACGAAAAAGGTCTATTGT+TGG - chr5_4:6034714-6034733 None:intergenic 30.0%
ACACTTTCCTGAAATTAAAC+TGG + chr5_4:6034896-6034915 Msa0832890:intron 30.0%
! AATAGGACCAGTTTAATTTC+AGG - chr5_4:6034906-6034925 None:intergenic 30.0%
TGAATTTGCAAGATATATGC+AGG - chr5_4:6035279-6035298 None:intergenic 30.0%
AATACAAAGACAGCAAGATT+TGG + chr5_4:6035517-6035536 Msa0832890:intron 30.0%
ATACAAAGACAGCAAGATTT+GGG + chr5_4:6035518-6035537 Msa0832890:intron 30.0%
GCCAATGTTGAAAATTCAAA+AGG - chr5_4:6035985-6036004 None:intergenic 30.0%
AAAAATTGTCATATAGGCAG+GGG - chr5_4:6036511-6036530 None:intergenic 30.0%
!! ATAAGAGAGGTATTATGAGA+TGG - chr5_4:6036566-6036585 None:intergenic 30.0%
CGATTGTTAAGTAGTAAACT+CGG + chr5_4:6036771-6036790 Msa0832890:intron 30.0%
GTGTCAAAATTGTGTTAACT+CGG + chr5_4:6036812-6036831 Msa0832890:intron 30.0%
!!! GCGCTTAAAAAACACTTTTT+TGG + chr5_4:6036940-6036959 Msa0832890:intron 30.0%
! AATTCTTTTGTTAAGCCCAT+TGG + chr5_4:6037002-6037021 Msa0832890:intron 30.0%
TATTTGCCATAAGCTTGAAT+GGG + chr5_4:6037733-6037752 Msa0832890:intron 30.0%
TCACTATACTAAGTAAGCTA+GGG - chr5_4:6038051-6038070 None:intergenic 30.0%
TTCACTATACTAAGTAAGCT+AGG - chr5_4:6038052-6038071 None:intergenic 30.0%
CCCAAGCTAAATTCAAATAA+TGG + chr5_4:6038256-6038275 Msa0832890:intron 30.0%
! GATTTCTTCATGTCATCTTT+TGG + chr5_4:6038278-6038297 Msa0832890:intron 30.0%
GAAGAAGGAACAATAACAAA+TGG + chr5_4:6038450-6038469 Msa0832890:CDS 30.0%
CTGTTAACGTTATTGTTAGG+AGG - chr5_4:6032874-6032893 None:intergenic 35.0%
AATAAGTCAAGGATTTGGCT+TGG + chr5_4:6032898-6032917 Msa0832890:CDS 35.0%
AACATATCCAACTCCTGAAA+TGG + chr5_4:6032921-6032940 Msa0832890:CDS 35.0%
!!! TTAATTTTGCTGACTCTGCA+TGG + chr5_4:6032998-6033017 Msa0832890:CDS 35.0%
! CGTTGAAGATGGAGTATTTA+TGG + chr5_4:6033122-6033141 Msa0832890:CDS 35.0%
! AGATGGAGTATTTATGGACA+TGG + chr5_4:6033128-6033147 Msa0832890:CDS 35.0%
TGGTAGTAACTACGATGATA+TGG + chr5_4:6033281-6033300 Msa0832890:CDS 35.0%
ACACTCAGATAGTTTCTTTG+TGG + chr5_4:6033313-6033332 Msa0832890:intron 35.0%
! TGGACCAATTCCAAAAGTAT+TGG + chr5_4:6033849-6033868 Msa0832890:intron 35.0%
! TGGGATGAATCCAATACTTT+TGG - chr5_4:6033862-6033881 None:intergenic 35.0%
GTTGTTGAGGCAAAGATTAA+TGG - chr5_4:6033882-6033901 None:intergenic 35.0%
! AAGAAACATTACCTTTTGCC+AGG + chr5_4:6034010-6034029 Msa0832890:intron 35.0%
! AGAAACATTACCTTTTGCCA+GGG + chr5_4:6034011-6034030 Msa0832890:intron 35.0%
AGAGTTGCAGAATAAAGTGA+GGG - chr5_4:6034230-6034249 None:intergenic 35.0%
AGTCAGTTCGAAAAAAAACC+AGG + chr5_4:6034298-6034317 Msa0832890:intron 35.0%
GTCAGTTCGAAAAAAAACCA+GGG + chr5_4:6034299-6034318 Msa0832890:intron 35.0%
AATTATATGGACGTTTGCCA+GGG - chr5_4:6034343-6034362 None:intergenic 35.0%
AAATTATATGGACGTTTGCC+AGG - chr5_4:6034344-6034363 None:intergenic 35.0%
!! TTACTTTTATCTGCCTCATG+TGG - chr5_4:6035554-6035573 None:intergenic 35.0%
TATAGGCAAGAAAAAAACCC+AGG + chr5_4:6035773-6035792 Msa0832890:intron 35.0%
ATAGGCAAGAAAAAAACCCA+GGG + chr5_4:6035774-6035793 Msa0832890:intron 35.0%
! AGAATAATGACCTTTTGCCA+GGG - chr5_4:6036122-6036141 None:intergenic 35.0%
! AAGAATAATGACCTTTTGCC+AGG - chr5_4:6036123-6036142 None:intergenic 35.0%
! TCATATCGAGAGGTATAGAA+AGG - chr5_4:6036179-6036198 None:intergenic 35.0%
ATATGAATTGAACGTCAGAG+TGG + chr5_4:6036193-6036212 Msa0832890:intron 35.0%
ATCAGCATGTCGAGATAAAA+GGG - chr5_4:6036240-6036259 None:intergenic 35.0%
AATCAGCATGTCGAGATAAA+AGG - chr5_4:6036241-6036260 None:intergenic 35.0%
!! CAGAGGTGTCTATTAAACAT+TGG - chr5_4:6036468-6036487 None:intergenic 35.0%
TCAAAATTGTGTTAACTCGG+AGG + chr5_4:6036815-6036834 Msa0832890:intron 35.0%
AGTTTGAGTGAGTTAACACA+TGG + chr5_4:6036874-6036893 Msa0832890:intron 35.0%
!! CAAGAAAGTGTTAACCGTAA+AGG - chr5_4:6037046-6037065 None:intergenic 35.0%
CACAATTGAGAACGTTAGAA+TGG + chr5_4:6037464-6037483 Msa0832890:intron 35.0%
AACATTAAAGTTGTGCTGCA+TGG + chr5_4:6037639-6037658 Msa0832890:intron 35.0%
CTATTTGCCATAAGCTTGAA+TGG + chr5_4:6037732-6037751 Msa0832890:intron 35.0%
TTATTGTTGACACCTTGACT+TGG - chr5_4:6037772-6037791 None:intergenic 35.0%
! AAGTCAAGGTGTCAACAATA+AGG + chr5_4:6037771-6037790 Msa0832890:intron 35.0%
ATGAATGACTTAGATCTCAC+TGG - chr5_4:6037926-6037945 None:intergenic 35.0%
TCATTTCCAACTACTCTATG+CGG + chr5_4:6037942-6037961 Msa0832890:intron 35.0%
CTCTCAAGTGAAAATTTCAC+TGG + chr5_4:6038012-6038031 Msa0832890:intron 35.0%
TCAAGTGAAAATTTCACTGG+AGG + chr5_4:6038015-6038034 Msa0832890:intron 35.0%
CAAGTGAAAATTTCACTGGA+GGG + chr5_4:6038016-6038035 Msa0832890:intron 35.0%
AAGTGAAAATTTCACTGGAG+GGG + chr5_4:6038017-6038036 Msa0832890:intron 35.0%
CACTATACTAAGTAAGCTAG+GGG - chr5_4:6038050-6038069 None:intergenic 35.0%
GGATTGGATTGTCTTTAACT+GGG - chr5_4:6038106-6038125 None:intergenic 35.0%
! TGGATTGGATTGTCTTTAAC+TGG - chr5_4:6038107-6038126 None:intergenic 35.0%
! AAGTTCCTCAGAAGTGATTT+TGG + chr5_4:6038349-6038368 Msa0832890:CDS 35.0%
AATAAGTCAAGGATTTGGCT+TGG + chr5_4:6032898-6032917 Msa0832890:CDS 35.0%
AACATATCCAACTCCTGAAA+TGG + chr5_4:6032921-6032940 Msa0832890:CDS 35.0%
!!! TTAATTTTGCTGACTCTGCA+TGG + chr5_4:6032998-6033017 Msa0832890:CDS 35.0%
GAAGGATAGTATGTTCATTG+AGG + chr5_4:6038724-6038743 Msa0832890:CDS 35.0%
CATGGAGATATTTGATACTC+AGG + chr5_4:6038871-6038890 Msa0832890:CDS 35.0%
TTGATACTCAGGTTTCACTA+TGG + chr5_4:6038882-6038901 Msa0832890:CDS 35.0%
CTAATGATACGGTGGAGATA+AGG + chr5_4:6033040-6033059 Msa0832890:CDS 40.0%
TGTTGTGTTACCGTTGAAGA+TGG + chr5_4:6033111-6033130 Msa0832890:CDS 40.0%
TCAAATTCTGATGACACCAC+CGG - chr5_4:6033186-6033205 None:intergenic 40.0%
GAAGGAGGATTAGAACGTAA+AGG - chr5_4:6033246-6033265 None:intergenic 40.0%
! TTGTAATTTGTAGGGGAAGG+AGG - chr5_4:6033261-6033280 None:intergenic 40.0%
! CCATTGTAATTTGTAGGGGA+AGG - chr5_4:6033264-6033283 None:intergenic 40.0%
CCTTCCCCTACAAATTACAA+TGG + chr5_4:6033261-6033280 Msa0832890:CDS 40.0%
AAAGAGGCTTACATCAGAGA+GGG - chr5_4:6033539-6033558 None:intergenic 40.0%
AAAAGAGGCTTACATCAGAG+AGG - chr5_4:6033540-6033559 None:intergenic 40.0%
TCGATAAGTTTCCTAACGCA+AGG + chr5_4:6033614-6033633 Msa0832890:intron 40.0%
!! CTCTTTTAACTCCTTGCGTT+AGG - chr5_4:6033628-6033647 None:intergenic 40.0%
!! CATTGACTCGAACATGCTAT+TGG + chr5_4:6033829-6033848 Msa0832890:intron 40.0%
ACGACAAAGTTCGACATTGA+TGG + chr5_4:6033933-6033952 Msa0832890:intron 40.0%
!! TGATGGTGCTACATTTGTGA+TGG + chr5_4:6033950-6033969 Msa0832890:intron 40.0%
! GAAACATTACCTTTTGCCAG+GGG + chr5_4:6034012-6034031 Msa0832890:intron 40.0%
ATTATGTCAGGGAAAATGCC+AGG - chr5_4:6034195-6034214 None:intergenic 40.0%
! ATTTTCCCTGACATAATCCC+TGG + chr5_4:6034198-6034217 Msa0832890:intron 40.0%
AAATGCCAGGGATTATGTCA+GGG - chr5_4:6034206-6034225 None:intergenic 40.0%
AAAATGCCAGGGATTATGTC+AGG - chr5_4:6034207-6034226 None:intergenic 40.0%
TAAAGTGAGGGAAAATGCCA+GGG - chr5_4:6034218-6034237 None:intergenic 40.0%
ATAAAGTGAGGGAAAATGCC+AGG - chr5_4:6034219-6034238 None:intergenic 40.0%
GAGAGTTGCAGAATAAAGTG+AGG - chr5_4:6034231-6034250 None:intergenic 40.0%
ATTATATGGACGTTTGCCAG+GGG - chr5_4:6034342-6034361 None:intergenic 40.0%
! ACCGGTGCATGTTCTTTTAT+AGG + chr5_4:6035756-6035775 Msa0832890:intron 40.0%
GCCTATAAAAGAACATGCAC+CGG - chr5_4:6035760-6035779 None:intergenic 40.0%
!! GATTCCTGTTGACTTGACAA+GGG - chr5_4:6035852-6035871 None:intergenic 40.0%
!! TGATTCCTGTTGACTTGACA+AGG - chr5_4:6035853-6035872 None:intergenic 40.0%
! AGCAGAGATTCCTCTACTTT+TGG + chr5_4:6035874-6035893 Msa0832890:intron 40.0%
!! TCTACTTTTGGCAAAACCCA+GGG + chr5_4:6035886-6035905 Msa0832890:intron 40.0%
GCAATGTCAGCAAAAAACCA+CGG - chr5_4:6035929-6035948 None:intergenic 40.0%
ATTCAAAAGGAGATGCATGC+AGG - chr5_4:6035972-6035991 None:intergenic 40.0%
!!! TAAAGCCCTGGTTTTTTGCA+AGG - chr5_4:6036009-6036028 None:intergenic 40.0%
! AAAAAACCAGGGCTTTAGTG+AGG + chr5_4:6036012-6036031 Msa0832890:intron 40.0%
! AAAAACCAGGGCTTTAGTGA+GGG + chr5_4:6036013-6036032 Msa0832890:intron 40.0%
!! TTTGCCAGGGATTTTGACAA+GGG - chr5_4:6036109-6036128 None:intergenic 40.0%
!! TTTTGCCAGGGATTTTGACA+AGG - chr5_4:6036110-6036129 None:intergenic 40.0%
TTGTCAAAATCCCTGGCAAA+AGG + chr5_4:6036109-6036128 Msa0832890:intron 40.0%
GACGTTCAATTCATATCGAG+AGG - chr5_4:6036189-6036208 None:intergenic 40.0%
TCAGCATGTCGAGATAAAAG+GGG - chr5_4:6036239-6036258 None:intergenic 40.0%
ATATAGGGGTTGGATAAGAG+AGG - chr5_4:6036579-6036598 None:intergenic 40.0%
GAGGATGAATATATAGGGGT+TGG - chr5_4:6036589-6036608 None:intergenic 40.0%
GGGAGAGGATGAATATATAG+GGG - chr5_4:6036593-6036612 None:intergenic 40.0%
GGGGAGAGGATGAATATATA+GGG - chr5_4:6036594-6036613 None:intergenic 40.0%
AGGGGAGAGGATGAATATAT+AGG - chr5_4:6036595-6036614 None:intergenic 40.0%
TAGTAAACTCGGACGAGTTT+AGG + chr5_4:6036782-6036801 Msa0832890:intron 40.0%
!! TCGGACGAGTTTAGGTTTTT+AGG + chr5_4:6036790-6036809 Msa0832890:intron 40.0%
!!! TTGGTTTTGGGCCATTTTCT+AGG + chr5_4:6036959-6036978 Msa0832890:intron 40.0%
CAGAAAATGGGCCTAGAAAA+TGG - chr5_4:6036973-6036992 None:intergenic 40.0%
AAAGGCAAGGCAAGTACTAT+GGG - chr5_4:6037028-6037047 None:intergenic 40.0%
TAAAGGCAAGGCAAGTACTA+TGG - chr5_4:6037029-6037048 None:intergenic 40.0%
TAGTACTTGCCTTGCCTTTA+CGG + chr5_4:6037029-6037048 Msa0832890:intron 40.0%
AAGTGTTAACCGTAAAGGCA+AGG - chr5_4:6037041-6037060 None:intergenic 40.0%
AAGACCTTGCATAAGATCGA+TGG + chr5_4:6037357-6037376 Msa0832890:intron 40.0%
CATAAGCTTGAATGGGTAGT+GGG + chr5_4:6037740-6037759 Msa0832890:intron 40.0%
! ACAATTGTGGCACTAGCTTA+CGG + chr5_4:6037871-6037890 Msa0832890:intron 40.0%
CATTTCCAACTACTCTATGC+GGG + chr5_4:6037943-6037962 Msa0832890:intron 40.0%
TTTCACTTGAGAGAGAACAG+TGG - chr5_4:6038005-6038024 None:intergenic 40.0%
ACTTAGTATAGTGAAAGCCG+TGG + chr5_4:6038057-6038076 Msa0832890:intron 40.0%
TTATCAGTAGCTAGCTACTG+AGG - chr5_4:6038221-6038240 None:intergenic 40.0%
! TCACTTCTGAGGAACTTGTA+CGG - chr5_4:6038346-6038365 None:intergenic 40.0%
TGATGCCAAAATCACTTCTG+AGG - chr5_4:6038357-6038376 None:intergenic 40.0%
AATTTGCCAAAGAAGAGAGC+AGG + chr5_4:6038380-6038399 Msa0832890:CDS 40.0%
ATTTGCCAAAGAAGAGAGCA+GGG + chr5_4:6038381-6038400 Msa0832890:CDS 40.0%
GTTTAAGGAGACAAGACATC+CGG + chr5_4:6038412-6038431 Msa0832890:CDS 40.0%
!! AAACATTTTAGCAGCCTCCA+TGG - chr5_4:6038690-6038709 None:intergenic 40.0%
TGCTAAAATGTTTGCGGTTG+AGG + chr5_4:6038697-6038716 Msa0832890:CDS 40.0%
GTTCATTGAGGAACAAGTTC+CGG + chr5_4:6038736-6038755 Msa0832890:CDS 40.0%
!! CTACCATAATTTGTTGGGGA+AGG - chr5_4:6038836-6038855 None:intergenic 40.0%
TAGTTATAACTGGGGTGACA+TGG + chr5_4:6038853-6038872 Msa0832890:CDS 40.0%
GTTGCTGCACTTGCTCTTAA+AGG + chr5_4:6032961-6032980 Msa0832890:CDS 45.0%
!!! ATTTTGCTGACTCTGCATGG+CGG + chr5_4:6033001-6033020 Msa0832890:CDS 45.0%
GTTGCCGGAGTCTAATGATA+CGG + chr5_4:6033029-6033048 Msa0832890:CDS 45.0%
TCCACCGTATCATTAGACTC+CGG - chr5_4:6033036-6033055 None:intergenic 45.0%
CTGTGCTTCTAGCACATTCT+TGG - chr5_4:6033160-6033179 None:intergenic 45.0%
! CAAGAATGTGCTAGAAGCAC+AGG + chr5_4:6033158-6033177 Msa0832890:CDS 45.0%
CTTTGCCTCAACAACGTAGT+TGG + chr5_4:6033887-6033906 Msa0832890:intron 45.0%
CACAAACGTCCAGTTTGTCA+GGG - chr5_4:6034064-6034083 None:intergenic 45.0%
TCACAAACGTCCAGTTTGTC+AGG - chr5_4:6034065-6034084 None:intergenic 45.0%
TGACAAACTGGACGTTTGTG+AGG + chr5_4:6034064-6034083 Msa0832890:intron 45.0%
GACAAACTGGACGTTTGTGA+GGG + chr5_4:6034065-6034084 Msa0832890:intron 45.0%
GTTTGTGAGGGAATTTCCCA+GGG + chr5_4:6034077-6034096 Msa0832890:intron 45.0%
TTTGTGAGGGAATTTCCCAG+GGG + chr5_4:6034078-6034097 Msa0832890:intron 45.0%
AAATGCCAGGCCATTTACCA+GGG - chr5_4:6034182-6034201 None:intergenic 45.0%
AAAATGCCAGGCCATTTACC+AGG - chr5_4:6034183-6034202 None:intergenic 45.0%
AGTCAGTTGTCAGTCAGTCA+TGG - chr5_4:6034266-6034285 None:intergenic 45.0%
ACTGACTGACAACTGACTGA+TGG + chr5_4:6034268-6034287 Msa0832890:intron 45.0%
AAAAAAACCAGGGACATCCG+AGG + chr5_4:6034309-6034328 Msa0832890:intron 45.0%
AAAAAACCAGGGACATCCGA+GGG + chr5_4:6034310-6034329 Msa0832890:intron 45.0%
TTGGGCAAGCTGTTAATGAC+CGG + chr5_4:6035738-6035757 Msa0832890:intron 45.0%
CTGCAAAAACTGCAATGTGC+AGG - chr5_4:6035828-6035847 None:intergenic 45.0%
! CTGCACATTGCAGTTTTTGC+AGG + chr5_4:6035826-6035845 Msa0832890:intron 45.0%
! CTGGGTTTTGCCAAAAGTAG+AGG - chr5_4:6035887-6035906 None:intergenic 45.0%
!! CTCTACTTTTGGCAAAACCC+AGG + chr5_4:6035885-6035904 Msa0832890:intron 45.0%
!! CTACTTTTGGCAAAACCCAG+GGG + chr5_4:6035887-6035906 Msa0832890:intron 45.0%
ATTTGCCAGGGAAAATGCCA+AGG - chr5_4:6036069-6036088 None:intergenic 45.0%
! TTTTCCCTGGCAAATTTGCC+AGG + chr5_4:6036074-6036093 Msa0832890:intron 45.0%
TTTCCCTGGCAAATTTGCCA+GGG + chr5_4:6036075-6036094 Msa0832890:intron 45.0%
CAAACCCTTGTCAAAATCCC+TGG + chr5_4:6036102-6036121 Msa0832890:intron 45.0%
ATGTCGAGATAAAAGGGGGT+GGG - chr5_4:6036234-6036253 None:intergenic 45.0%
CAGCATGTCGAGATAAAAGG+GGG - chr5_4:6036238-6036257 None:intergenic 45.0%
TCATATAGGCAGGGGTCAAA+GGG - chr5_4:6036503-6036522 None:intergenic 45.0%
AAGTTGTGGAGGAGAGAAAG+AGG - chr5_4:6036621-6036640 None:intergenic 45.0%
AGGAAAGGAGAAAGTTGTGG+AGG - chr5_4:6036632-6036651 None:intergenic 45.0%
CAGAGGAAAGGAGAAAGTTG+TGG - chr5_4:6036635-6036654 None:intergenic 45.0%
AGGTAGCAAAGACAGAGGAA+AGG - chr5_4:6036647-6036666 None:intergenic 45.0%
AGAAGAGGTAGCAAAGACAG+AGG - chr5_4:6036652-6036671 None:intergenic 45.0%
TGAAGATGAGCAGTGAGAAG+AGG - chr5_4:6036667-6036686 None:intergenic 45.0%
! AAGAGGTGAGTCTTTGAGGA+AGG - chr5_4:6036697-6036716 None:intergenic 45.0%
TAAAGTTGTGCTGCATGGCA+TGG + chr5_4:6037644-6037663 Msa0832890:intron 45.0%
CCACTACCCATTCAAGCTTA+TGG - chr5_4:6037742-6037761 None:intergenic 45.0%
CCATAAGCTTGAATGGGTAG+TGG + chr5_4:6037739-6037758 Msa0832890:intron 45.0%
AGTGGGAAACAACCAAGTCA+AGG + chr5_4:6037757-6037776 Msa0832890:intron 45.0%
! CAATTGTGGCACTAGCTTAC+GGG + chr5_4:6037872-6037891 Msa0832890:intron 45.0%
TAATGGAAGCTCATTGGCCA+CGG - chr5_4:6038077-6038096 None:intergenic 45.0%
CCAGTCTAATGGAAGCTCAT+TGG - chr5_4:6038083-6038102 None:intergenic 45.0%
CCAATGAGCTTCCATTAGAC+TGG + chr5_4:6038080-6038099 Msa0832890:intron 45.0%
CTTTAACTGGGCCAGTCTAA+TGG - chr5_4:6038094-6038113 None:intergenic 45.0%
TGAGGAAGTGAATGTGTGTG+TGG - chr5_4:6038203-6038222 None:intergenic 45.0%
TCTGAGGAACTTGTACGGTT+TGG - chr5_4:6038341-6038360 None:intergenic 45.0%
AAAGAAGAGAGCAGGGAGAA+GGG + chr5_4:6038388-6038407 Msa0832890:CDS 45.0%
! TGTATCGAGGAGTACGAAGA+AGG + chr5_4:6038435-6038454 Msa0832890:CDS 45.0%
GTTGCTGCACTTGCTCTTAA+AGG + chr5_4:6032961-6032980 Msa0832890:CDS 45.0%
!!! ATTTTGCTGACTCTGCATGG+CGG + chr5_4:6033001-6033020 Msa0832890:CDS 45.0%
GGAGGCTGCTAAAATGTTTG+CGG + chr5_4:6038691-6038710 Msa0832890:CDS 45.0%
!! CCATAATTTGTTGGGGAAGG+AGG - chr5_4:6038833-6038852 None:intergenic 45.0%
CCTCCTTCCCCAACAAATTA+TGG + chr5_4:6038830-6038849 Msa0832890:CDS 45.0%
!!! AAAATAAAAATTTTAAAAAC+TGG - chr5_4:6034753-6034772 None:intergenic 5.0%
!!! AATTTTTTTAAAAGAAAAAT+AGG - chr5_4:6034946-6034965 None:intergenic 5.0%
TACGGTGGAGATAAGGAGAG+CGG + chr5_4:6033047-6033066 Msa0832890:CDS 50.0%
! TGTGCTAGAAGCACAGGTTC+CGG + chr5_4:6033164-6033183 Msa0832890:CDS 50.0%
AGCGACCAACTACGTTGTTG+AGG - chr5_4:6033895-6033914 None:intergenic 50.0%
! TGTAGTGCGTTTCGAGTCGT+TGG - chr5_4:6033991-6034010 None:intergenic 50.0%
! GGGATTCTGTCCTTTTCCCA+GGG - chr5_4:6034044-6034063 None:intergenic 50.0%
! AGGGATTCTGTCCTTTTCCC+AGG - chr5_4:6034045-6034064 None:intergenic 50.0%
GGACAGAATCCCTGACAAAC+TGG + chr5_4:6034052-6034071 Msa0832890:intron 50.0%
CGTTTGTGAGGGAATTTCCC+AGG + chr5_4:6034076-6034095 Msa0832890:intron 50.0%
ACACCCCTGGGAAAAAAACG+AGG + chr5_4:6034148-6034167 Msa0832890:intron 50.0%
CACCCCTGGGAAAAAAACGA+GGG + chr5_4:6034149-6034168 Msa0832890:intron 50.0%
!!! AGGCCCTCGTTTTTTTCCCA+GGG - chr5_4:6034155-6034174 None:intergenic 50.0%
!!! TAGGCCCTCGTTTTTTTCCC+AGG - chr5_4:6034156-6034175 None:intergenic 50.0%
AGGCCATTTACCAGGGGTTT+AGG - chr5_4:6034175-6034194 None:intergenic 50.0%
TAAACCCCTGGTAAATGGCC+TGG + chr5_4:6034174-6034193 Msa0832890:intron 50.0%
AATGCCAGGCCATTTACCAG+GGG - chr5_4:6034181-6034200 None:intergenic 50.0%
AAAAACCAGGGACATCCGAG+GGG + chr5_4:6034311-6034330 Msa0832890:intron 50.0%
GGGCAATAGCTAACCACATG+AGG + chr5_4:6035538-6035557 Msa0832890:intron 50.0%
AAAACCCAGGGCTTATCCGA+CGG + chr5_4:6035786-6035805 Msa0832890:intron 50.0%
AAAAACCACGGCCTTTGCCA+GGG - chr5_4:6035917-6035936 None:intergenic 50.0%
AAAAAACCACGGCCTTTGCC+AGG - chr5_4:6035918-6035937 None:intergenic 50.0%
AAAGGAGATGCATGCAGGTG+TGG - chr5_4:6035967-6035986 None:intergenic 50.0%
TTGGCGCCTTGCAAAAAACC+AGG + chr5_4:6036000-6036019 Msa0832890:intron 50.0%
TGGCGCCTTGCAAAAAACCA+GGG + chr5_4:6036001-6036020 Msa0832890:intron 50.0%
TACCGCTGGCATACAACACA+GGG - chr5_4:6036044-6036063 None:intergenic 50.0%
AAAATGCCAAGGACTACCGC+TGG - chr5_4:6036058-6036077 None:intergenic 50.0%
! GTAGTCCTTGGCATTTTCCC+TGG + chr5_4:6036061-6036080 Msa0832890:intron 50.0%
TTCCCTGGCAAATTTGCCAG+GGG + chr5_4:6036076-6036095 Msa0832890:intron 50.0%
AACCCCTGGCAAATTTGCCA+GGG - chr5_4:6036081-6036100 None:intergenic 50.0%
AAACCCCTGGCAAATTTGCC+AGG - chr5_4:6036082-6036101 None:intergenic 50.0%
! TGACAAGGGTTTGAAACCCC+TGG - chr5_4:6036095-6036114 None:intergenic 50.0%
TGTCGAGATAAAAGGGGGTG+GGG - chr5_4:6036233-6036252 None:intergenic 50.0%
CATGTCGAGATAAAAGGGGG+TGG - chr5_4:6036235-6036254 None:intergenic 50.0%
AAGGGGTGGAGAGATTTCAG+AGG - chr5_4:6036485-6036504 None:intergenic 50.0%
CATATAGGCAGGGGTCAAAG+GGG - chr5_4:6036502-6036521 None:intergenic 50.0%
GTCATATAGGCAGGGGTCAA+AGG - chr5_4:6036504-6036523 None:intergenic 50.0%
GAGGAGAGAAAGAGGTAGAG+GGG - chr5_4:6036613-6036632 None:intergenic 50.0%
GGAGGAGAGAAAGAGGTAGA+GGG - chr5_4:6036614-6036633 None:intergenic 50.0%
TGGAGGAGAGAAAGAGGTAG+AGG - chr5_4:6036615-6036634 None:intergenic 50.0%
GAGGAAGAGGTGAGTCTTTG+AGG - chr5_4:6036701-6036720 None:intergenic 50.0%
AAGAGAGGTCTTGGAGGAAG+AGG - chr5_4:6036714-6036733 None:intergenic 50.0%
ATGGCGAAGAAGAGAGGTCT+TGG - chr5_4:6036723-6036742 None:intergenic 50.0%
AAGACCTCTCTTCTTCGCCA+TGG + chr5_4:6036722-6036741 Msa0832890:intron 50.0%
AGACCTCTCTTCTTCGCCAT+GGG + chr5_4:6036723-6036742 Msa0832890:intron 50.0%
ACACTGAATCTCGTGTCCCA+TGG - chr5_4:6036742-6036761 None:intergenic 50.0%
GGCAAGTACTATGGGCCAAT+GGG - chr5_4:6037020-6037039 None:intergenic 50.0%
AGGCAAGTACTATGGGCCAA+TGG - chr5_4:6037021-6037040 None:intergenic 50.0%
CTCGCCATCGATCTTATGCA+AGG - chr5_4:6037364-6037383 None:intergenic 50.0%
TCACTGGACTCTACAGTCAC+AGG - chr5_4:6037910-6037929 None:intergenic 50.0%
ACGTATGTGACACGTGAACG+CGG - chr5_4:6038137-6038156 None:intergenic 50.0%
CTTCTCCCTGCTCTCTTCTT+TGG - chr5_4:6038389-6038408 None:intergenic 50.0%
CAAAGAAGAGAGCAGGGAGA+AGG + chr5_4:6038387-6038406 Msa0832890:CDS 50.0%
!! AGCAGGGAGAAGGGTGTTTA+AGG + chr5_4:6038397-6038416 Msa0832890:CDS 50.0%
ACAAGACATCCGGTGTATCG+AGG + chr5_4:6038422-6038441 Msa0832890:CDS 50.0%
CTTCGTACTCCTCGATACAC+CGG - chr5_4:6038434-6038453 None:intergenic 50.0%
GTTTGCGGTTGAGGACAAGA+AGG + chr5_4:6038706-6038725 Msa0832890:CDS 50.0%
CATTGAGGAACAAGTTCCGG+CGG + chr5_4:6038739-6038758 Msa0832890:CDS 50.0%
AGCAGAACGTAGAGGCTCAT+TGG - chr5_4:6038810-6038829 None:intergenic 50.0%
CGTGCAGCCATTTCAGGAGT+TGG - chr5_4:6032931-6032950 None:intergenic 55.0%
TGTGCACGTGCAGCCATTTC+AGG - chr5_4:6032937-6032956 None:intergenic 55.0%
GCCGGAGTCTAATGATACGG+TGG + chr5_4:6033032-6033051 Msa0832890:CDS 55.0%
GGAGGCTGCTCAGTTGTTTG+CGG + chr5_4:6033074-6033093 Msa0832890:CDS 55.0%
CGAGTCGTTGGACGGTTGAT+GGG - chr5_4:6033979-6033998 None:intergenic 55.0%
TCGAGTCGTTGGACGGTTGA+TGG - chr5_4:6033980-6033999 None:intergenic 55.0%
! GTGCGTTTCGAGTCGTTGGA+CGG - chr5_4:6033987-6034006 None:intergenic 55.0%
! GGGATTTTGCCCCTGGCAAA+AGG - chr5_4:6034024-6034043 None:intergenic 55.0%
TTTGCCAGGGGCAAAATCCC+TGG + chr5_4:6034024-6034043 Msa0832890:intron 55.0%
TTGCCAGGGGCAAAATCCCT+GGG + chr5_4:6034025-6034044 Msa0832890:intron 55.0%
! TTTCCCAGGGATTTTGCCCC+TGG - chr5_4:6034031-6034050 None:intergenic 55.0%
GGGGCAAAATCCCTGGGAAA+AGG + chr5_4:6034031-6034050 Msa0832890:intron 55.0%
TCGTCGCTAACCCTTTGCCA+GGG + chr5_4:6034122-6034141 Msa0832890:intron 55.0%
!!! GGCCCTCGTTTTTTTCCCAG+GGG - chr5_4:6034154-6034173 None:intergenic 55.0%
AAAACGAGGGCCTAAACCCC+TGG + chr5_4:6034162-6034181 Msa0832890:intron 55.0%
GGGCCTAAACCCCTGGTAAA+TGG + chr5_4:6034169-6034188 Msa0832890:intron 55.0%
TTAAACCCCTCGGATGTCCC+TGG - chr5_4:6034319-6034338 None:intergenic 55.0%
TTGCCAGGGGTTAAACCCCT+CGG - chr5_4:6034329-6034348 None:intergenic 55.0%
TTTGCCGTCGGATAAGCCCT+GGG - chr5_4:6035793-6035812 None:intergenic 55.0%
TGCAATGTGCAGGCTTGCGA+GGG - chr5_4:6035818-6035837 None:intergenic 55.0%
CAGGCCCTTGTCAAGTCAAC+AGG + chr5_4:6035845-6035864 Msa0832890:intron 55.0%
GGTGTGGCAGGTGAAAAGCA+AGG - chr5_4:6035951-6035970 None:intergenic 55.0%
GTATGCCCTCACTAAAGCCC+TGG - chr5_4:6036021-6036040 None:intergenic 55.0%
ACCCCTGTGTTGTATGCCAG+CGG + chr5_4:6036039-6036058 Msa0832890:intron 55.0%
ACCGCTGGCATACAACACAG+GGG - chr5_4:6036043-6036062 None:intergenic 55.0%
CTACCGCTGGCATACAACAC+AGG - chr5_4:6036045-6036064 None:intergenic 55.0%
TGTATGCCAGCGGTAGTCCT+TGG + chr5_4:6036049-6036068 Msa0832890:intron 55.0%
GTCGAGATAAAAGGGGGTGG+GGG - chr5_4:6036232-6036251 None:intergenic 55.0%
GAGAAAGAGGTAGAGGGGAG+AGG - chr5_4:6036608-6036627 None:intergenic 55.0%
GCGAAGAAGAGAGGTCTTGG+AGG - chr5_4:6036720-6036739 None:intergenic 55.0%
TGTCCCATGGCGAAGAAGAG+AGG - chr5_4:6036729-6036748 None:intergenic 55.0%
AGGGTCCCGCATAGAGTAGT+TGG - chr5_4:6037951-6037970 None:intergenic 55.0%
GTATGTGACACGTGAACGCG+GGG - chr5_4:6038135-6038154 None:intergenic 55.0%
CGTATGTGACACGTGAACGC+GGG - chr5_4:6038136-6038155 None:intergenic 55.0%
GCGTTCACGTGTCACATACG+TGG + chr5_4:6038136-6038155 Msa0832890:intron 55.0%
CGTGCAGCCATTTCAGGAGT+TGG - chr5_4:6032931-6032950 None:intergenic 55.0%
TGTGCACGTGCAGCCATTTC+AGG - chr5_4:6032937-6032956 None:intergenic 55.0%
GTTGCCGGAGTCGAATGATG+CGG + chr5_4:6038646-6038665 Msa0832890:CDS 55.0%
CGAATGATGCGGCGGAGATA+AGG + chr5_4:6038657-6038676 Msa0832890:CDS 55.0%
ATGATGCGGCGGAGATAAGG+AGG + chr5_4:6038660-6038679 Msa0832890:CDS 55.0%
TGATGCGGCGGAGATAAGGA+GGG + chr5_4:6038661-6038680 Msa0832890:CDS 55.0%
TCAAATTCCGACGACACCGC+CGG - chr5_4:6038758-6038777 None:intergenic 55.0%
GAAGGAGGAGCAGAACGTAG+AGG - chr5_4:6038818-6038837 None:intergenic 55.0%
TGCATGGCGGTTGACGTTGC+CGG + chr5_4:6033014-6033033 Msa0832890:CDS 60.0%
GGAGATAAGGAGAGCGGCGA+TGG + chr5_4:6033053-6033072 Msa0832890:CDS 60.0%
GATAAGGAGAGCGGCGATGG+AGG + chr5_4:6033056-6033075 Msa0832890:CDS 60.0%
! GCTAGAAGCACAGGTTCCGG+TGG + chr5_4:6033167-6033186 Msa0832890:CDS 60.0%
!! GTCGTTGGACGGTTGATGGG+AGG - chr5_4:6033976-6033995 None:intergenic 60.0%
TTGCGAGTGCTTGTGCCCCT+GGG - chr5_4:6034096-6034115 None:intergenic 60.0%
TTTGCGAGTGCTTGTGCCCC+TGG - chr5_4:6034097-6034116 None:intergenic 60.0%
CTCGTCGCTAACCCTTTGCC+AGG + chr5_4:6034121-6034140 Msa0832890:intron 60.0%
CGTCGCTAACCCTTTGCCAG+GGG + chr5_4:6034123-6034142 Msa0832890:intron 60.0%
GGGGTGTAACCCCTGGCAAA+GGG - chr5_4:6034135-6034154 None:intergenic 60.0%
! AGGGGTGTAACCCCTGGCAA+AGG - chr5_4:6034136-6034155 None:intergenic 60.0%
TTTGCCAGGGGTTACACCCC+TGG + chr5_4:6034135-6034154 Msa0832890:intron 60.0%
TTGCCAGGGGTTACACCCCT+GGG + chr5_4:6034136-6034155 Msa0832890:intron 60.0%
! TTTCCCAGGGGTGTAACCCC+TGG - chr5_4:6034142-6034161 None:intergenic 60.0%
CATCCGAGGGGTTTAACCCC+TGG + chr5_4:6034323-6034342 Msa0832890:intron 60.0%
CTTTGCCGTCGGATAAGCCC+TGG - chr5_4:6035794-6035813 None:intergenic 60.0%
GCAATGTGCAGGCTTGCGAG+GGG - chr5_4:6035817-6035836 None:intergenic 60.0%
CTGCAATGTGCAGGCTTGCG+AGG - chr5_4:6035819-6035838 None:intergenic 60.0%
CAAAACCCAGGGGTTGTCCC+TGG + chr5_4:6035897-6035916 Msa0832890:intron 60.0%
CTTTGCCAGGGACAACCCCT+GGG - chr5_4:6035905-6035924 None:intergenic 60.0%
GAGATGCATGCAGGTGTGGC+AGG - chr5_4:6035963-6035982 None:intergenic 60.0%
ATAGGCAGGGGTCAAAGGGG+TGG - chr5_4:6036499-6036518 None:intergenic 60.0%
GAACGCGGGGACAGTTGGAT+TGG - chr5_4:6038122-6038141 None:intergenic 60.0%
TGCATGGCGGTTGACGTTGC+CGG + chr5_4:6033014-6033033 Msa0832890:CDS 60.0%
TCCGCCGCATCATTCGACTC+CGG - chr5_4:6038653-6038672 None:intergenic 60.0%
!! ACAAGTTCCGGCGGTGTCGT+CGG + chr5_4:6038748-6038767 Msa0832890:CDS 60.0%
CTTGCGAGGGGCTTTGCCGT+CGG - chr5_4:6035805-6035824 None:intergenic 65.0%
CCTTTGCCAGGGACAACCCC+TGG - chr5_4:6035906-6035925 None:intergenic 65.0%
CCAGGGGTTGTCCCTGGCAA+AGG + chr5_4:6035903-6035922 Msa0832890:intron 65.0%
GTTGTCCCTGGCAAAGGCCG+TGG + chr5_4:6035909-6035928 Msa0832890:intron 65.0%
CACGTGAACGCGGGGACAGT+TGG - chr5_4:6038127-6038146 None:intergenic 65.0%
GCCGGAGTCGAATGATGCGG+CGG + chr5_4:6038649-6038668 Msa0832890:CDS 65.0%
TGCGGCGGAGATAAGGAGGG+CGG + chr5_4:6038664-6038683 Msa0832890:CDS 65.0%
GGAGATAAGGAGGGCGGCCA+TGG + chr5_4:6038670-6038689 Msa0832890:CDS 65.0%
GATAAGGAGGGCGGCCATGG+AGG + chr5_4:6038673-6038692 Msa0832890:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 6032862 6038919 6032862 ID=Msa0832890;Name=Msa0832890
chr5_4 mRNA 6032862 6038919 6032862 ID=Msa0832890-mRNA-1;Parent=Msa0832890;Name=Msa0832890-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|3|0|353
chr5_4 exon 6032862 6033095 6032862 ID=Msa0832890-mRNA-1:exon:2582;Parent=Msa0832890-mRNA-1
chr5_4 exon 6033111 6033323 6033111 ID=Msa0832890-mRNA-1:exon:2583;Parent=Msa0832890-mRNA-1
chr5_4 exon 6038305 6038919 6038305 ID=Msa0832890-mRNA-1:exon:2584;Parent=Msa0832890-mRNA-1
chr5_4 CDS 6032862 6033095 6032862 ID=Msa0832890-mRNA-1:cds;Parent=Msa0832890-mRNA-1
chr5_4 CDS 6033111 6033323 6033111 ID=Msa0832890-mRNA-1:cds;Parent=Msa0832890-mRNA-1
chr5_4 CDS 6038305 6038919 6038305 ID=Msa0832890-mRNA-1:cds;Parent=Msa0832890-mRNA-1
Gene Sequence

>Msa0832890

ATGAGAGTTCCTCCTAACAATAACGTTAACAGAAACAATAAGTCAAGGATTTGGCTTGGAACATATCCAACTCCTGAAATGGCTGCACGTGCACATGATGTTGCTGCACTTGCTCTTAAAGGAAAATCAGCTTGTCTTAATTTTGCTGACTCTGCATGGCGGTTGACGTTGCCGGAGTCTAATGATACGGTGGAGATAAGGAGAGCGGCGATGGAGGCTGCTCAGTTGTTTGCGTGTTGTGTTACCGTTGAAGATGGAGTATTTATGGACATGGAAGATTCCAAGAATGTGCTAGAAGCACAGGTTCCGGTGGTGTCATCAGAATTTGAAGACATGCATGATTTGATTTTGAGTATTGCTAATGAGCCTTTACGTTCTAATCCTCCTTCCCCTACAAATTACAATGGTAGTAACTACGATGATATGGAGATATTTGACACTCAGATATACTCAGACACTTCTTCTTCAGAAACAAGTTCACCAAACCGTACAAGTTCCTCAGAAGTGATTTTGGCATCAGCTAATTTGCCAAAGAAGAGAGCAGGGAGAAGGGTGTTTAAGGAGACAAGACATCCGGTGTATCGAGGAGTACGAAGAAGGAACAATAACAAATGGGTTTGTGAGATGAGAGTTCCTAACAATAACGTTAACAAAAACAATAAGTCAAGGATTTGGCTTGGAACATATCCAACTCCTGAAATGGCTGCACGTGCACATGATGTTGCTGCACTTGCTCTTAAAGGAAAATCAGCTTGTCTTAATTTTGCTGACTCTGCATGGCGGTTGACGTTGCCGGAGTCGAATGATGCGGCGGAGATAAGGAGGGCGGCCATGGAGGCTGCTAAAATGTTTGCGGTTGAGGACAAGAAGGATAGTATGTTCATTGAGGAACAAGTTCCGGCGGTGTCGTCGGAATTTGAAAGCATGCATGATTTGCTTCTAAGAATTGCCAATGAGCCTCTACGTTCTGCTCCTCCTTCCCCAACAAATTATGGTAGTTATAACTGGGGTGACATGGAGATATTTGATACTCAGGTTTCACTATGGAGCTTTTCTATTTGA
Protein sequence

>Msa0832890

MRVPPNNNVNRNNKSRIWLGTYPTPEMAARAHDVAALALKGKSACLNFADSAWRLTLPESNDTVEIRRAAMEAAQLFACCVTVEDGVFMDMEDSKNVLEAQVPVVSSEFEDMHDLILSIANEPLRSNPPSPTNYNGSNYDDMEIFDTQIYSDTSSSETSSPNRTSSSEVILASANLPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNNNVNKNNKSRIWLGTYPTPEMAARAHDVAALALKGKSACLNFADSAWRLTLPESNDAAEIRRAAMEAAKMFAVEDKKDSMFIEEQVPAVSSEFESMHDLLLRIANEPLRSAPPSPTNYGSYNWGDMEIFDTQVSLWSFSI*