AlfalfaGEDB | Msa0795170

M. sativa cultivar zhongmu-4 / Msa0795170

KEGG: K09286
GO: GO:0001067 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009889 GO:0009987 GO:0010035 GO:0010371 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0016143 GO:0019216 GO:0019219 GO:0019222 GO:0019747 GO:0019748 GO:0019757 GO:0019760 GO:0022603 GO:0022604 GO:0031323 GO:0031326 GO:0032350 GO:0040008 GO:0040034 GO:0042221 GO:0043436 GO:0043455 GO:0043565 GO:0044212 GO:0044237 GO:0044281 GO:0046885 GO:0046890 GO:0048506 GO:0048509 GO:0048510 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050826 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051510 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1901700 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795170	sp\|Q9SGJ6\|DRE1E_ARATH	50.857	175	80	1	38	212	13	181	7.19e-57	181

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795170	G7KDI1	82.609	230	23	4	1	214	1	229	1.11e-129	374

TFs/TRs:

Gene ID	Type	Classification
Msa0795170	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0753850	Msa0795170	0.885504	7.682392e-72	-8.615850e-47
Msa0795170	Msa0795580	0.988488	3.254492e-174	-8.615850e-47
Msa0795170	Msa0832890	0.852643	4.036080e-61	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795170	MtrunA17_Chr5g0398091	82.609	230	23	4	1	214	1	229	2.14e-133	374
Msa0795170	MtrunA17_Chr5g0398061	82.174	230	19	4	1	214	1	224	5.45e-123	347
Msa0795170	MtrunA17_Chr5g0398081	77.941	204	26	4	29	214	24	226	1.81e-107	308
Msa0795170	MtrunA17_Chr1g0203861	46.875	224	87	7	3	214	2	205	1.35e-53	171
Msa0795170	MtrunA17_Chr6g0473961	48.223	197	81	5	28	212	28	215	1.35e-52	168
Msa0795170	MtrunA17_Chr6g0473981	57.143	154	55	3	13	166	17	159	1.72e-52	169
Msa0795170	MtrunA17_Chr6g0474001	63.910	133	37	3	13	145	17	138	2.20e-52	169
Msa0795170	MtrunA17_Chr4g0057231	76.724	116	19	3	23	136	13	122	8.69e-52	164
Msa0795170	MtrunA17_Chr6g0473741	48.515	202	82	5	26	214	38	230	1.31e-50	164
Msa0795170	MtrunA17_Chr6g0473781	45.455	209	81	5	27	212	29	227	1.54e-50	163
Msa0795170	MtrunA17_Chr6g0473971	57.516	153	54	3	14	166	18	159	1.57e-50	164
Msa0795170	MtrunA17_Chr6g0473881	55.556	153	54	3	1	145	48	194	5.47e-48	159
Msa0795170	MtrunA17_Chr6g0473931	66.964	112	31	1	34	145	12	117	7.00e-48	155
Msa0795170	MtrunA17_Chr6g0473941	69.444	108	27	1	38	145	16	117	1.52e-44	147
Msa0795170	MtrunA17_Chr6g0473771	60.784	102	34	1	27	128	15	110	3.50e-38	128
Msa0795170	MtrunA17_Chr6g0473861	62.500	120	38	2	26	145	35	147	1.34e-37	132
Msa0795170	MtrunA17_Chr6g0473791	65.432	81	22	1	28	108	30	104	1.84e-31	112
Msa0795170	MtrunA17_Chr2g0321071	61.053	95	31	2	49	142	41	130	5.31e-31	113
Msa0795170	MtrunA17_Chr5g0399441	50.000	126	56	2	51	175	24	143	8.52e-30	108
Msa0795170	MtrunA17_Chr7g0265851	61.176	85	27	1	51	135	20	98	7.62e-28	104
Msa0795170	MtrunA17_Chr3g0140161	56.842	95	35	1	50	144	38	126	1.60e-27	103
Msa0795170	MtrunA17_Chr8g0334801	53.608	97	39	1	39	135	36	126	3.77e-26	100
Msa0795170	MtrunA17_Chr8g0390091	53.043	115	43	3	33	144	14	120	8.73e-26	100
Msa0795170	MtrunA17_Chr7g0232261	53.608	97	39	1	39	135	45	135	8.98e-25	97.4
Msa0795170	MtrunA17_Chr7g0275841	54.651	86	33	1	50	135	23	102	1.56e-24	95.1
Msa0795170	MtrunA17_Chr6g0486701	57.895	95	34	1	52	146	41	129	4.35e-24	95.1
Msa0795170	MtrunA17_Chr8g0340311	52.525	99	41	1	51	149	43	135	8.43e-24	94.0
Msa0795170	MtrunA17_Chr2g0331231	57.143	84	30	1	52	135	38	115	1.02e-23	94.0
Msa0795170	MtrunA17_Chr4g0057241	40.936	171	78	6	51	212	11	167	2.02e-23	92.0
Msa0795170	MtrunA17_Chr8g0346741	52.273	88	33	2	38	125	25	103	2.22e-21	87.0
Msa0795170	MtrunA17_Chr4g0055951	63.235	68	19	1	53	120	72	133	5.95e-21	87.8
Msa0795170	MtrunA17_Chr6g0486711	53.191	94	38	1	51	144	45	132	1.16e-17	78.6
Msa0795170	MtrunA17_Chr1g0146191	68.182	66	15	1	51	116	43	102	2.25e-16	75.5
Msa0795170	MtrunA17_Chr4g0017851	44.944	89	43	1	54	142	117	199	4.81e-16	75.1
Msa0795170	MtrunA17_Chr1g0150631	32.075	159	90	4	54	212	37	177	5.10e-16	73.9
Msa0795170	MtrunA17_Chr5g0396191	54.545	88	34	1	55	142	11	92	9.37e-16	72.4
Msa0795170	MtrunA17_Chr3g0134161	37.500	120	61	4	24	141	16	123	6.14e-15	69.7
Msa0795170	MtrunA17_Chr5g0396181	48.352	91	41	1	55	145	21	105	1.17e-14	69.7
Msa0795170	MtrunA17_Chr1g0150661	32.911	158	78	4	14	164	6	142	1.42e-14	70.1
Msa0795170	MtrunA17_Chr2g0295421	39.216	102	54	2	20	119	59	154	5.77e-14	68.9
Msa0795170	MtrunA17_Chr1g0150671	37.168	113	64	2	54	166	45	150	7.05e-14	68.9
Msa0795170	MtrunA17_Chr1g0153151	53.125	64	24	1	55	118	44	101	8.08e-14	67.0
Msa0795170	MtrunA17_Chr1g0196781	47.761	67	29	1	50	116	147	207	1.08e-13	68.6
Msa0795170	MtrunA17_Chr3g0115631	44.828	87	39	3	31	116	127	205	1.30e-13	68.6
Msa0795170	MtrunA17_Chr5g0437671	54.688	64	23	1	55	118	85	142	2.20e-13	68.2
Msa0795170	MtrunA17_Chr5g0401871	43.750	96	36	3	55	142	25	110	2.34e-13	65.9
Msa0795170	MtrunA17_Chr1g0150691	48.485	66	28	1	54	119	21	80	3.95e-13	65.9
Msa0795170	MtrunA17_Chr2g0334031	36.364	110	61	2	11	120	76	176	4.65e-13	67.0
Msa0795170	MtrunA17_Chr5g0396301	53.030	66	23	2	55	118	18	77	5.08e-13	64.3
Msa0795170	MtrunA17_Chr2g0324131	49.231	65	27	1	54	118	217	275	5.15e-13	67.0
Msa0795170	MtrunA17_Chr3g0136551	38.043	92	51	1	55	146	65	150	1.06e-12	65.5
Msa0795170	MtrunA17_Chr2g0301191	40.000	85	45	1	54	138	18	96	1.12e-12	64.7
Msa0795170	MtrunA17_Chr2g0301171	41.176	85	44	1	54	138	18	96	1.27e-12	64.3
Msa0795170	MtrunA17_Chr5g0425561	43.011	93	44	3	26	118	147	230	1.73e-12	65.5
Msa0795170	MtrunA17_Chr1g0179161	40.230	87	26	1	37	123	1	61	1.79e-12	63.2
Msa0795170	MtrunA17_Chr7g0221501	34.783	115	66	3	5	118	2	108	1.99e-12	63.2
Msa0795170	MtrunA17_Chr7g0225131	46.970	66	26	2	54	119	28	84	3.02e-12	60.5
Msa0795170	MtrunA17_Chr1g0195151	34.959	123	69	3	6	125	27	141	4.88e-12	63.9
Msa0795170	MtrunA17_Chr8g0382491	49.206	63	26	1	54	116	112	168	5.00e-12	63.5
Msa0795170	MtrunA17_Chr2g0301181	40.000	85	45	1	54	138	18	96	5.76e-12	62.8
Msa0795170	MtrunA17_Chr1g0158971	40.909	88	41	2	55	142	115	191	5.83e-12	63.9
Msa0795170	MtrunA17_Chr7g0221471	47.059	68	30	1	51	118	47	108	7.48e-12	61.6
Msa0795170	MtrunA17_Chr5g0396171	44.928	69	32	1	57	125	26	88	1.03e-11	59.3
Msa0795170	MtrunA17_Chr8g0335331	51.613	62	25	1	55	116	125	181	1.48e-11	61.2
Msa0795170	MtrunA17_Chr3g0136541	37.778	90	50	1	57	146	42	125	2.50e-11	61.2
Msa0795170	MtrunA17_Chr4g0046161	46.377	69	32	1	48	116	50	113	2.61e-11	58.9
Msa0795170	MtrunA17_Chr2g0283181	42.045	88	43	2	32	116	123	205	2.78e-11	61.6
Msa0795170	MtrunA17_Chr7g0250721	50.000	62	26	1	55	116	61	117	2.81e-11	60.5
Msa0795170	MtrunA17_Chr8g0350701	41.111	90	46	2	55	143	27	110	3.37e-11	61.6
Msa0795170	MtrunA17_Chr7g0250731	50.000	62	26	1	55	116	61	117	3.56e-11	60.5
Msa0795170	MtrunA17_Chr7g0250711	50.000	62	26	1	55	116	60	116	6.20e-11	59.7
Msa0795170	MtrunA17_Chr2g0323171	40.777	103	46	3	55	156	65	153	6.85e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795170	AT1G63030.2	50.857	175	80	1	38	212	13	181	7.31e-58	181
Msa0795170	AT1G63030.1	50.857	175	80	1	38	212	13	181	7.31e-58	181
Msa0795170	AT1G12610.1	47.926	217	72	6	26	212	2	207	2.14e-55	176
Msa0795170	AT4G25470.1	43.162	234	89	6	5	212	1	216	2.63e-53	171
Msa0795170	AT5G51990.1	59.459	148	53	2	1	148	1	141	5.91e-51	165
Msa0795170	AT4G25480.1	46.018	226	94	6	5	212	1	216	6.10e-50	162
Msa0795170	AT4G25490.1	44.196	224	98	7	5	212	1	213	8.77e-44	146
Msa0795170	AT5G25810.1	58.511	94	33	1	51	144	32	119	2.39e-29	109
Msa0795170	AT5G11590.1	49.593	123	55	2	22	144	19	134	9.59e-28	105
Msa0795170	AT2G44940.1	57.609	92	33	1	51	142	96	181	7.72e-25	99.4
Msa0795170	AT4G32800.1	53.191	94	38	1	51	144	15	102	5.02e-24	95.5
Msa0795170	AT4G16750.1	45.528	123	56	2	13	135	3	114	5.46e-24	94.4
Msa0795170	AT2G35700.1	55.814	86	32	1	50	135	40	119	1.60e-23	93.6
Msa0795170	AT1G01250.1	44.444	117	58	2	20	135	9	119	7.11e-22	89.0
Msa0795170	AT2G36450.1	59.494	79	25	2	51	128	11	83	1.87e-21	87.8
Msa0795170	AT3G16280.1	52.941	85	34	1	51	135	57	135	3.02e-21	88.6
Msa0795170	AT3G16280.2	52.941	85	34	1	51	135	75	153	3.77e-21	88.6
Msa0795170	AT3G60490.1	51.546	97	40	2	40	135	55	145	2.30e-20	86.7
Msa0795170	AT5G52020.1	47.500	120	56	2	51	170	61	173	8.54e-20	84.3
Msa0795170	AT2G25820.1	56.098	82	30	1	54	135	25	100	1.21e-19	84.0
Msa0795170	AT1G71450.1	42.308	104	54	1	54	157	23	120	1.09e-18	80.5
Msa0795170	AT1G74930.1	41.758	91	47	1	55	145	21	105	3.88e-16	73.9
Msa0795170	AT1G19210.1	43.434	99	46	2	55	153	12	100	5.43e-16	73.2
Msa0795170	AT1G46768.3	48.387	93	37	3	50	142	27	108	8.13e-16	71.6
Msa0795170	AT1G46768.1	48.387	93	37	3	50	142	27	108	9.71e-16	72.0
Msa0795170	AT1G46768.2	48.387	93	37	3	50	142	27	108	9.71e-16	72.0
Msa0795170	AT4G13620.1	36.522	115	66	2	10	123	186	294	1.03e-15	75.1
Msa0795170	AT2G23340.1	45.745	94	39	2	55	142	28	115	1.10e-15	72.4
Msa0795170	AT3G50260.1	43.158	95	47	2	48	142	14	101	2.46e-15	70.9
Msa0795170	AT1G21910.1	54.545	66	24	1	55	120	50	109	5.78e-15	71.6
Msa0795170	AT4G36900.1	50.704	71	29	1	46	116	21	85	1.20e-14	70.1
Msa0795170	AT5G67190.1	39.286	112	46	4	55	155	21	121	1.58e-14	69.3
Msa0795170	AT2G47520.1	45.833	72	33	1	45	116	40	105	2.11e-14	68.9
Msa0795170	AT1G77200.1	54.348	92	36	1	53	144	41	126	2.98e-14	69.7
Msa0795170	AT1G22190.1	46.835	79	34	2	40	118	70	140	3.21e-14	70.1
Msa0795170	AT4G39780.1	49.254	67	28	1	50	116	88	148	7.56e-14	68.9
Msa0795170	AT1G33760.1	48.352	91	41	1	55	145	20	104	1.84e-13	66.6
Msa0795170	AT2G22200.1	50.794	63	25	1	54	116	70	126	1.92e-13	67.8
Msa0795170	AT4G31060.1	48.387	62	26	1	55	116	27	82	2.84e-13	66.2
Msa0795170	AT1G36060.1	52.381	63	24	1	54	116	142	198	3.04e-13	67.8
Msa0795170	AT2G20880.1	40.449	89	45	2	30	118	164	244	3.09e-13	67.8
Msa0795170	AT4G06746.1	47.059	68	30	1	55	122	36	97	4.63e-13	64.7
Msa0795170	AT3G16770.1	39.130	92	50	1	27	118	51	136	1.12e-12	65.5
Msa0795170	AT2G44840.1	54.839	62	23	1	55	116	92	148	1.41e-12	64.7
Msa0795170	AT5G65130.1	47.692	65	28	1	54	118	110	168	1.75e-12	65.1
Msa0795170	AT5G43410.1	44.737	76	35	2	41	116	3	71	1.83e-12	62.8
Msa0795170	AT5G65130.2	47.692	65	28	1	54	118	112	170	1.98e-12	65.1
Msa0795170	AT1G78080.1	50.794	63	25	1	54	116	151	207	2.64e-12	65.1
Msa0795170	AT1G12630.1	48.454	97	34	3	32	128	5	85	3.97e-12	63.2
Msa0795170	AT4G28140.1	47.692	65	28	1	54	118	142	200	4.38e-12	64.3
Msa0795170	AT5G21960.1	46.269	67	30	1	53	119	5	65	5.46e-12	63.2
Msa0795170	AT5G07580.1	44.872	78	36	2	49	126	106	176	2.22e-11	61.2
Msa0795170	AT5G61600.1	51.515	66	25	2	51	116	86	144	2.52e-11	61.6
Msa0795170	AT3G23230.1	46.269	67	31	1	55	121	20	81	3.28e-11	59.3
Msa0795170	AT5G13330.1	48.529	68	27	2	51	118	37	96	7.06e-11	60.1
Msa0795170	AT5G05410.1	51.613	62	24	1	55	116	79	134	8.84e-11	60.8
Msa0795170	AT5G05410.2	51.613	62	24	1	55	116	79	134	9.44e-11	60.5

Find 55 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCAGGGAGAAGGGTGTTTA+AGG	0.128785	5_3:+7072877	Msa0795170:CDS
CTTCTCCCTGCTCTCTTCTT+TGG	0.153724	5_3:-7072866	None:intergenic
GTTGCTGCACTTGCTCTTAA+AGG	0.198231	5_3:+7073058	Msa0795170:CDS
AAGTTCCTCAGAAGTGATTT+TGG	0.245839	5_3:+7072829	Msa0795170:CDS
CCTCCTTCCCCAACAAATTA+TGG	0.257840	5_3:+7073310	Msa0795170:CDS
CAAATTATGGTAGTTATAAC+TGG	0.271221	5_3:+7073323	Msa0795170:CDS
TGTGCACGTGCAGCCATTTC+AGG	0.278245	5_3:-7073031	None:intergenic
GATTTCTTCATGTCATCTTT+TGG	0.292478	5_3:+7072758	Msa0795170:CDS
TGCTAAAATGTTTGCGGTTG+AGG	0.320688	5_3:+7073177	Msa0795170:CDS
TATAACTACCATAATTTGTT+GGG	0.332163	5_3:-7073318	None:intergenic
AAAACAATAAGTCAAGGATT+TGG	0.365596	5_3:+7072990	Msa0795170:CDS
TTGATACTCAGGTTTCACTA+TGG	0.394923	5_3:+7073362	Msa0795170:CDS
TGCATGGCGGTTGACGTTGC+CGG	0.406208	5_3:+7073111	Msa0795170:CDS
GAAGAAGGAACAATAACAAA+TGG	0.418693	5_3:+7072930	Msa0795170:CDS
GTTCATTGAGGAACAAGTTC+CGG	0.422163	5_3:+7073216	Msa0795170:CDS
CGAATGATGCGGCGGAGATA+AGG	0.424020	5_3:+7073137	Msa0795170:CDS
AACATATCCAACTCCTGAAA+TGG	0.444364	5_3:+7073018	Msa0795170:CDS
TCTGAGGAACTTGTACGGTT+TGG	0.448003	5_3:-7072818	None:intergenic
CATGGAGATATTTGATACTC+AGG	0.454117	5_3:+7073351	Msa0795170:CDS
CGTGCAGCCATTTCAGGAGT+TGG	0.460218	5_3:-7073025	None:intergenic
GGAGATAAGGAGGGCGGCCA+TGG	0.460779	5_3:+7073150	Msa0795170:CDS
TTATAACTACCATAATTTGT+TGG	0.467212	5_3:-7073319	None:intergenic
AGCAGAACGTAGAGGCTCAT+TGG	0.471475	5_3:-7073287	None:intergenic
CCATAATTTGTTGGGGAAGG+AGG	0.492901	5_3:-7073310	None:intergenic
CAAAGAAGAGAGCAGGGAGA+AGG	0.505022	5_3:+7072867	Msa0795170:CDS
AATAAGTCAAGGATTTGGCT+TGG	0.507380	5_3:+7072995	Msa0795170:CDS
AATTTGCCAAAGAAGAGAGC+AGG	0.515612	5_3:+7072860	Msa0795170:CDS
AAGAAGGAACAATAACAAAT+GGG	0.519116	5_3:+7072931	Msa0795170:CDS
AAAGAAGAGAGCAGGGAGAA+GGG	0.521556	5_3:+7072868	Msa0795170:CDS
CTACCATAATTTGTTGGGGA+AGG	0.538402	5_3:-7073313	None:intergenic
TGTATCGAGGAGTACGAAGA+AGG	0.543663	5_3:+7072915	Msa0795170:CDS
GGAGGCTGCTAAAATGTTTG+CGG	0.547515	5_3:+7073171	Msa0795170:CDS
TAGTTATAACTGGGGTGACA+TGG	0.558776	5_3:+7073333	Msa0795170:CDS
TCAAATTCCGACGACACCGC+CGG	0.565367	5_3:-7073235	None:intergenic
GATAAGGAGGGCGGCCATGG+AGG	0.569228	5_3:+7073153	Msa0795170:CDS
GTTTAAGGAGACAAGACATC+CGG	0.575697	5_3:+7072892	Msa0795170:CDS
AAATTATGGTAGTTATAACT+GGG	0.579912	5_3:+7073324	Msa0795170:CDS
GTTTGCGGTTGAGGACAAGA+AGG	0.582429	5_3:+7073186	Msa0795170:CDS
TCACTTCTGAGGAACTTGTA+CGG	0.586438	5_3:-7072823	None:intergenic
ACAAGTTCCGGCGGTGTCGT+CGG	0.587246	5_3:+7073228	Msa0795170:CDS
ATGATGCGGCGGAGATAAGG+AGG	0.600683	5_3:+7073140	Msa0795170:CDS
ATTTGCCAAAGAAGAGAGCA+GGG	0.607930	5_3:+7072861	Msa0795170:CDS
GAAGGATAGTATGTTCATTG+AGG	0.609059	5_3:+7073204	Msa0795170:CDS
ATAACTACCATAATTTGTTG+GGG	0.610998	5_3:-7073317	None:intergenic
ACAAGACATCCGGTGTATCG+AGG	0.630846	5_3:+7072902	Msa0795170:CDS
TGATGCCAAAATCACTTCTG+AGG	0.635581	5_3:-7072834	None:intergenic
GCCGGAGTCGAATGATGCGG+CGG	0.646749	5_3:+7073129	Msa0795170:CDS
CTTCGTACTCCTCGATACAC+CGG	0.651638	5_3:-7072911	None:intergenic
CATTGAGGAACAAGTTCCGG+CGG	0.656816	5_3:+7073219	Msa0795170:CDS
TCCGCCGCATCATTCGACTC+CGG	0.660450	5_3:-7073130	None:intergenic
GAAGGAGGAGCAGAACGTAG+AGG	0.666556	5_3:-7073295	None:intergenic
TGATGCGGCGGAGATAAGGA+GGG	0.673723	5_3:+7073141	Msa0795170:CDS
TGCGGCGGAGATAAGGAGGG+CGG	0.678855	5_3:+7073144	Msa0795170:CDS
GTTGCCGGAGTCGAATGATG+CGG	0.679657	5_3:+7073126	Msa0795170:CDS
AATTATGGTAGTTATAACTG+GGG	0.706472	5_3:+7073325	Msa0795170:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTGTTAACGTTATTGTT+AGG	-	chr5_3:7072974-7072993	None:intergenic	20.0%
!!	TTAACAAAAACAATAAGTCA+AGG	+	chr5_3:7072984-7073003	Msa0795170:CDS	20.0%
!!!	TATAACTACCATAATTTGTT+GGG	-	chr5_3:7073321-7073340	None:intergenic	20.0%
!!!	TTATAACTACCATAATTTGT+TGG	-	chr5_3:7073322-7073341	None:intergenic	20.0%
!!	AAATTATGGTAGTTATAACT+GGG	+	chr5_3:7073324-7073343	Msa0795170:CDS	20.0%
!	AAGAAGGAACAATAACAAAT+GGG	+	chr5_3:7072931-7072950	Msa0795170:CDS	25.0%
!	AAAACAATAAGTCAAGGATT+TGG	+	chr5_3:7072990-7073009	Msa0795170:CDS	25.0%
!!!	ATAACTACCATAATTTGTTG+GGG	-	chr5_3:7073320-7073339	None:intergenic	25.0%
!	CAAATTATGGTAGTTATAAC+TGG	+	chr5_3:7073323-7073342	Msa0795170:CDS	25.0%
!	AATTATGGTAGTTATAACTG+GGG	+	chr5_3:7073325-7073344	Msa0795170:CDS	25.0%
!	GATTTCTTCATGTCATCTTT+TGG	+	chr5_3:7072758-7072777	Msa0795170:CDS	30.0%
	GAAGAAGGAACAATAACAAA+TGG	+	chr5_3:7072930-7072949	Msa0795170:CDS	30.0%
!	AAGTTCCTCAGAAGTGATTT+TGG	+	chr5_3:7072829-7072848	Msa0795170:CDS	35.0%
	AATAAGTCAAGGATTTGGCT+TGG	+	chr5_3:7072995-7073014	Msa0795170:CDS	35.0%
	AACATATCCAACTCCTGAAA+TGG	+	chr5_3:7073018-7073037	Msa0795170:CDS	35.0%
!!!	TTAATTTTGCTGACTCTGCA+TGG	+	chr5_3:7073095-7073114	Msa0795170:CDS	35.0%
	GAAGGATAGTATGTTCATTG+AGG	+	chr5_3:7073204-7073223	Msa0795170:CDS	35.0%
	CATGGAGATATTTGATACTC+AGG	+	chr5_3:7073351-7073370	Msa0795170:CDS	35.0%
	TTGATACTCAGGTTTCACTA+TGG	+	chr5_3:7073362-7073381	Msa0795170:CDS	35.0%
!	TCACTTCTGAGGAACTTGTA+CGG	-	chr5_3:7072826-7072845	None:intergenic	40.0%
	TGATGCCAAAATCACTTCTG+AGG	-	chr5_3:7072837-7072856	None:intergenic	40.0%
	AATTTGCCAAAGAAGAGAGC+AGG	+	chr5_3:7072860-7072879	Msa0795170:CDS	40.0%
	ATTTGCCAAAGAAGAGAGCA+GGG	+	chr5_3:7072861-7072880	Msa0795170:CDS	40.0%
	GTTTAAGGAGACAAGACATC+CGG	+	chr5_3:7072892-7072911	Msa0795170:CDS	40.0%
!!	AAACATTTTAGCAGCCTCCA+TGG	-	chr5_3:7073170-7073189	None:intergenic	40.0%
	TGCTAAAATGTTTGCGGTTG+AGG	+	chr5_3:7073177-7073196	Msa0795170:CDS	40.0%
	GTTCATTGAGGAACAAGTTC+CGG	+	chr5_3:7073216-7073235	Msa0795170:CDS	40.0%
!!	CTACCATAATTTGTTGGGGA+AGG	-	chr5_3:7073316-7073335	None:intergenic	40.0%
	TAGTTATAACTGGGGTGACA+TGG	+	chr5_3:7073333-7073352	Msa0795170:CDS	40.0%
	TCTGAGGAACTTGTACGGTT+TGG	-	chr5_3:7072821-7072840	None:intergenic	45.0%
	AAAGAAGAGAGCAGGGAGAA+GGG	+	chr5_3:7072868-7072887	Msa0795170:CDS	45.0%
!	TGTATCGAGGAGTACGAAGA+AGG	+	chr5_3:7072915-7072934	Msa0795170:CDS	45.0%
	GTTGCTGCACTTGCTCTTAA+AGG	+	chr5_3:7073058-7073077	Msa0795170:CDS	45.0%
!!!	ATTTTGCTGACTCTGCATGG+CGG	+	chr5_3:7073098-7073117	Msa0795170:CDS	45.0%
	GGAGGCTGCTAAAATGTTTG+CGG	+	chr5_3:7073171-7073190	Msa0795170:CDS	45.0%
!!	CCATAATTTGTTGGGGAAGG+AGG	-	chr5_3:7073313-7073332	None:intergenic	45.0%
	CCTCCTTCCCCAACAAATTA+TGG	+	chr5_3:7073310-7073329	Msa0795170:CDS	45.0%
	CTTCTCCCTGCTCTCTTCTT+TGG	-	chr5_3:7072869-7072888	None:intergenic	50.0%
	CAAAGAAGAGAGCAGGGAGA+AGG	+	chr5_3:7072867-7072886	Msa0795170:CDS	50.0%
!!	AGCAGGGAGAAGGGTGTTTA+AGG	+	chr5_3:7072877-7072896	Msa0795170:CDS	50.0%
	ACAAGACATCCGGTGTATCG+AGG	+	chr5_3:7072902-7072921	Msa0795170:CDS	50.0%
	CTTCGTACTCCTCGATACAC+CGG	-	chr5_3:7072914-7072933	None:intergenic	50.0%
	GTTTGCGGTTGAGGACAAGA+AGG	+	chr5_3:7073186-7073205	Msa0795170:CDS	50.0%
	CATTGAGGAACAAGTTCCGG+CGG	+	chr5_3:7073219-7073238	Msa0795170:CDS	50.0%
	AGCAGAACGTAGAGGCTCAT+TGG	-	chr5_3:7073290-7073309	None:intergenic	50.0%
	CGTGCAGCCATTTCAGGAGT+TGG	-	chr5_3:7073028-7073047	None:intergenic	55.0%
	TGTGCACGTGCAGCCATTTC+AGG	-	chr5_3:7073034-7073053	None:intergenic	55.0%
	GTTGCCGGAGTCGAATGATG+CGG	+	chr5_3:7073126-7073145	Msa0795170:CDS	55.0%
	CGAATGATGCGGCGGAGATA+AGG	+	chr5_3:7073137-7073156	Msa0795170:CDS	55.0%
	ATGATGCGGCGGAGATAAGG+AGG	+	chr5_3:7073140-7073159	Msa0795170:CDS	55.0%
	TGATGCGGCGGAGATAAGGA+GGG	+	chr5_3:7073141-7073160	Msa0795170:CDS	55.0%
	TCAAATTCCGACGACACCGC+CGG	-	chr5_3:7073238-7073257	None:intergenic	55.0%
	GAAGGAGGAGCAGAACGTAG+AGG	-	chr5_3:7073298-7073317	None:intergenic	55.0%
	TGCATGGCGGTTGACGTTGC+CGG	+	chr5_3:7073111-7073130	Msa0795170:CDS	60.0%
	TCCGCCGCATCATTCGACTC+CGG	-	chr5_3:7073133-7073152	None:intergenic	60.0%
!!	ACAAGTTCCGGCGGTGTCGT+CGG	+	chr5_3:7073228-7073247	Msa0795170:CDS	60.0%
	GCCGGAGTCGAATGATGCGG+CGG	+	chr5_3:7073129-7073148	Msa0795170:CDS	65.0%
	TGCGGCGGAGATAAGGAGGG+CGG	+	chr5_3:7073144-7073163	Msa0795170:CDS	65.0%
	GGAGATAAGGAGGGCGGCCA+TGG	+	chr5_3:7073150-7073169	Msa0795170:CDS	65.0%
	GATAAGGAGGGCGGCCATGG+AGG	+	chr5_3:7073153-7073172	Msa0795170:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	7072755	7073399	7072755	ID=Msa0795170;Name=Msa0795170
chr5_3	mRNA	7072755	7073399	7072755	ID=Msa0795170-mRNA-1;Parent=Msa0795170;Name=Msa0795170-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|214
chr5_3	exon	7072755	7073399	7072755	ID=Msa0795170-mRNA-1:exon:2856;Parent=Msa0795170-mRNA-1
chr5_3	CDS	7072755	7073399	7072755	ID=Msa0795170-mRNA-1:cds;Parent=Msa0795170-mRNA-1

Gene Sequence

>Msa0795170

ATGGATTTCTTCATGTCATCTTTTGGTGAGTACTCAGACACTTCTTCTTCAGAAACAAGTTCACCAAACCGTACAAGTTCCTCAGAAGTGATTTTGGCATCAGCTAATTTGCCAAAGAAGAGAGCAGGGAGAAGGGTGTTTAAGGAGACAAGACATCCGGTGTATCGAGGAGTACGAAGAAGGAACAATAACAAATGGGTTTGTGAGATGAGAGTTCCTAACAATAACGTTAACAAAAACAATAAGTCAAGGATTTGGCTTGGAACATATCCAACTCCTGAAATGGCTGCACGTGCACATGATGTTGCTGCACTTGCTCTTAAAGGAAAATCAGCTTGTCTTAATTTTGCTGACTCTGCATGGCGGTTGACGTTGCCGGAGTCGAATGATGCGGCGGAGATAAGGAGGGCGGCCATGGAGGCTGCTAAAATGTTTGCGGTTGAGGACAAGAAGGATAGTATGTTCATTGAGGAACAAGTTCCGGCGGTGTCGTCGGAATTTGAAAGCATGCATGATTTGCTTCTAAGAATTGCCAATGAGCCTCTACGTTCTGCTCCTCCTTCCCCAACAAATTATGGTAGTTATAACTGGGGTGACATGGAGATATTTGATACTCAGGTTTCACTATGGAGCTTTTCTATTTGA

Protein sequence

>Msa0795170

MDFFMSSFGEYSDTSSSETSSPNRTSSSEVILASANLPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNNNVNKNNKSRIWLGTYPTPEMAARAHDVAALALKGKSACLNFADSAWRLTLPESNDAAEIRRAAMEAAKMFAVEDKKDSMFIEEQVPAVSSEFESMHDLLLRIANEPLRSAPPSPTNYGSYNWGDMEIFDTQVSLWSFSI*