Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796990 | XP_003611401.2 | 94.203 | 345 | 2 | 1 | 22 | 348 | 168 | 512 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796990 | sp|Q8RY73|DXO_ARATH | 73.333 | 345 | 74 | 1 | 22 | 348 | 189 | 533 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796990 | G7JYM5 | 94.203 | 345 | 2 | 1 | 22 | 348 | 168 | 512 | 0.0 | 671 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0796980 | Msa0796990 | 0.863596 | 2.224125e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796990 | MtrunA17_Chr5g0399941 | 94.203 | 345 | 2 | 1 | 22 | 348 | 168 | 512 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796990 | AT4G17620.1 | 73.333 | 345 | 74 | 1 | 22 | 348 | 189 | 533 | 0.0 | 519 |
| Msa0796990 | AT4G17620.2 | 72.754 | 345 | 76 | 1 | 22 | 348 | 189 | 533 | 0.0 | 512 |
| Msa0796990 | AT4G17620.3 | 71.594 | 345 | 72 | 2 | 22 | 348 | 189 | 525 | 9.20e-175 | 496 |
Find 79 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCTCTCCGTCTGCTCTTC+TGG | 0.061101 | 5_3:+9059779 | None:intergenic |
| AAATCACTTTGTGGTCTTTC+TGG | 0.112221 | 5_3:+9060375 | None:intergenic |
| TTCTGTGATTAAGACAAAAT+TGG | 0.167983 | 5_3:-9059724 | Msa0796990:CDS |
| TTTGGCAATTAGATGTTATC+TGG | 0.198464 | 5_3:-9059835 | Msa0796990:intron |
| TATCCTCAGAGGCAGAATTT+TGG | 0.221848 | 5_3:-9062573 | Msa0796990:CDS |
| TCGATCAGATGATGAACTTT+TGG | 0.232351 | 5_3:-9058408 | Msa0796990:three_prime_UTR |
| TATTCTCTGTGTAATATCTT+TGG | 0.238375 | 5_3:+9059072 | None:intergenic |
| CGCCATATCACTGAAGATAT+TGG | 0.313720 | 5_3:-9061052 | Msa0796990:CDS |
| GTTGATTACCTACCACAAAA+TGG | 0.317863 | 5_3:+9060772 | None:intergenic |
| GGCTCTCCGTCTGCTCTTCT+GGG | 0.318433 | 5_3:+9059780 | None:intergenic |
| CGCGCCACCTTTCAACCGTT+TGG | 0.326781 | 5_3:-9058578 | Msa0796990:CDS |
| GAGGTATTATGCTGGCTTTA+TGG | 0.328410 | 5_3:-9058752 | Msa0796990:CDS |
| CTCCAATATCTTCAGTGATA+TGG | 0.332949 | 5_3:+9061050 | None:intergenic |
| TCTGTGATTAAGACAAAATT+GGG | 0.335148 | 5_3:-9059723 | Msa0796990:CDS |
| AAAATTAAGGGCAACTGTTA+AGG | 0.353311 | 5_3:+9058485 | None:intergenic |
| CGCCATGAGCCTTGGGAAAT+GGG | 0.358477 | 5_3:-9060444 | Msa0796990:CDS |
| TCGCCATGAGCCTTGGGAAA+TGG | 0.363810 | 5_3:-9060445 | Msa0796990:CDS |
| AGGTGACTTGTTATTACATC+TGG | 0.374070 | 5_3:+9058532 | None:intergenic |
| CTTATATTCGCCATGAGCCT+TGG | 0.404077 | 5_3:-9060452 | Msa0796990:CDS |
| GCTGGCATTCTTCCGCGTCC+TGG | 0.412844 | 5_3:-9062600 | Msa0796990:CDS |
| AAATTCTGCCTCTGAGGATA+AGG | 0.415076 | 5_3:+9062576 | None:intergenic |
| TTGGCAGGGTGGAGTGTGCC+TGG | 0.423068 | 5_3:-9058786 | Msa0796990:intron |
| GTGCCTGGCGTTTGCGGACG+AGG | 0.428434 | 5_3:-9058771 | Msa0796990:CDS |
| ATGATGCAGGCCGTCTTGTT+CGG | 0.436710 | 5_3:-9059111 | Msa0796990:CDS |
| CTGCGATCTAAATCACTTTG+TGG | 0.446570 | 5_3:+9060366 | None:intergenic |
| TTATATTCGCCATGAGCCTT+GGG | 0.449517 | 5_3:-9060451 | Msa0796990:CDS |
| GCTATAGTCGTGCAGAAGGC+GGG | 0.453075 | 5_3:-9061230 | Msa0796990:CDS |
| CATCATCTGATCGAAGGTGC+TGG | 0.473531 | 5_3:+9058417 | None:intergenic |
| GACTTAGGCTCAGAAGGTTA+TGG | 0.475541 | 5_3:-9060843 | Msa0796990:CDS |
| TGGAGTGTGCCTGGCGTTTG+CGG | 0.481068 | 5_3:-9058777 | Msa0796990:CDS |
| TTCTGGGATCTTCAGTGGCA+AGG | 0.495567 | 5_3:+9059796 | None:intergenic |
| GCCTTCTGCACGACTATAGC+AGG | 0.501287 | 5_3:+9061233 | None:intergenic |
| TTGTGTACTCCCATTTCCCA+AGG | 0.506004 | 5_3:+9060435 | None:intergenic |
| TTGGCAATTAGATGTTATCT+GGG | 0.506474 | 5_3:-9059834 | Msa0796990:intron |
| CAGCATAATGATAGAGGAGC+TGG | 0.510421 | 5_3:-9062618 | None:intergenic |
| ACAATTCAATATAGGAAGCA+AGG | 0.513666 | 5_3:-9058459 | Msa0796990:three_prime_UTR |
| TGCTATAGTCGTGCAGAAGG+CGG | 0.514503 | 5_3:-9061231 | Msa0796990:CDS |
| TGAAGAAACTCTGTCAAGAA+AGG | 0.514756 | 5_3:-9062481 | Msa0796990:CDS |
| CTCCCATTTCCCAAGGCTCA+TGG | 0.517450 | 5_3:+9060442 | None:intergenic |
| CAAGGGCAGCATAATGATAG+AGG | 0.517610 | 5_3:-9062624 | None:intergenic |
| TGCCTCTGAGGATAAGGTCC+AGG | 0.524197 | 5_3:+9062582 | None:intergenic |
| ATCATCTGATCGAAGGTGCT+GGG | 0.525350 | 5_3:+9058418 | None:intergenic |
| TATCTTGATGGGTGCTGAGA+TGG | 0.529076 | 5_3:-9059691 | Msa0796990:CDS |
| TGCTGTGATACGACTACTGA+TGG | 0.531330 | 5_3:-9059666 | Msa0796990:CDS |
| GGGAAATGGGAGTACACAAA+AGG | 0.545125 | 5_3:-9060431 | Msa0796990:CDS |
| GGGGCTCACCGTATCTTGAT+GGG | 0.555557 | 5_3:-9059702 | Msa0796990:CDS |
| ATACCTCGTCCGCAAACGCC+AGG | 0.556805 | 5_3:+9058768 | None:intergenic |
| AGAAGTTCCAAACGGTTGAA+AGG | 0.557237 | 5_3:+9058571 | None:intergenic |
| CTGTCATACAGGGATGATGC+AGG | 0.560137 | 5_3:-9059124 | Msa0796990:intron |
| AAAACAGACTTAGGCTCAGA+AGG | 0.561278 | 5_3:-9060849 | Msa0796990:intron |
| TTGCGGACGAGGTATTATGC+TGG | 0.562925 | 5_3:-9058760 | Msa0796990:CDS |
| CAATTCAATATAGGAAGCAA+GGG | 0.563974 | 5_3:-9058458 | Msa0796990:three_prime_UTR |
| TGCTCTTCTGGGATCTTCAG+TGG | 0.571759 | 5_3:+9059791 | None:intergenic |
| CACAAAGTGATTTAGATCGC+AGG | 0.574140 | 5_3:-9060365 | Msa0796990:CDS |
| TGAGGATAAGGTCCAGGACG+CGG | 0.577599 | 5_3:+9062588 | None:intergenic |
| CTATAGTCGTGCAGAAGGCG+GGG | 0.578781 | 5_3:-9061229 | Msa0796990:CDS |
| GAAGATCCCAGAAGAGCAGA+CGG | 0.581979 | 5_3:-9059786 | Msa0796990:CDS |
| ATTGGAGCTGATTTGAACGA+AGG | 0.584782 | 5_3:-9061034 | Msa0796990:CDS |
| CTATAGCAGGCAAGTTCACA+AGG | 0.584854 | 5_3:+9061246 | None:intergenic |
| CACAGAACAAAATTCAACAT+TGG | 0.586435 | 5_3:+9059740 | None:intergenic |
| GCCTGCTATAGTCGTGCAGA+AGG | 0.591701 | 5_3:-9061234 | Msa0796990:CDS |
| GAGCTTGCAGAAGTTCCAAA+CGG | 0.601546 | 5_3:+9058563 | None:intergenic |
| TACCCAAAATTCTGCCTCTG+AGG | 0.603135 | 5_3:+9062570 | None:intergenic |
| TCTCAGCACCCATCAAGATA+CGG | 0.605709 | 5_3:+9059694 | None:intergenic |
| TTGGCATCAACATCATGTAT+CGG | 0.605933 | 5_3:+9059759 | None:intergenic |
| AGATGTAATAACAAGTCACC+TGG | 0.607473 | 5_3:-9058530 | Msa0796990:CDS |
| AAAGTTCATCATCTGATCGA+AGG | 0.616481 | 5_3:+9058411 | None:intergenic |
| TTACCTTGTTCAGATTGTTG+CGG | 0.618634 | 5_3:+9060643 | None:intergenic |
| CTGTGATTAAGACAAAATTG+GGG | 0.629784 | 5_3:-9059722 | Msa0796990:CDS |
| AGTTCCAAACGGTTGAAAGG+TGG | 0.634627 | 5_3:+9058574 | None:intergenic |
| GCATTTCAGTCCGAACAAGA+CGG | 0.638960 | 5_3:+9059101 | None:intergenic |
| ATGGGAGTACACAAAAGGAA+TGG | 0.640999 | 5_3:-9060426 | Msa0796990:CDS |
| AGACAAAACGTTCATCGCGG+TGG | 0.657013 | 5_3:+9062526 | None:intergenic |
| GTCCTGGACCTTATCCTCAG+AGG | 0.674041 | 5_3:-9062584 | Msa0796990:CDS |
| TGTGATTAAGACAAAATTGG+GGG | 0.674231 | 5_3:-9059721 | Msa0796990:CDS |
| AAAGTGATTTAGATCGCAGG+AGG | 0.695618 | 5_3:-9060362 | Msa0796990:intron |
| GTACCGCAACAATCTGAACA+AGG | 0.701773 | 5_3:-9060646 | Msa0796990:intron |
| GCAGTTGAATTATCATAACG+AGG | 0.728754 | 5_3:-9059495 | Msa0796990:intron |
| CAGAGACAAAACGTTCATCG+CGG | 0.738071 | 5_3:+9062523 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTACTTGAAAAAAATTA+TGG | + | chr5_3:9060835-9060854 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTTCAAGTAAAT+TGG | - | chr5_3:9060834-9060853 | Msa0796990:CDS | 10.0% |
| !! | TTGAATTGTTTAAAAATTAA+GGG | + | chr5_3:9062436-9062455 | None:intergenic | 10.0% |
| !! | ATTGAATTGTTTAAAAATTA+AGG | + | chr5_3:9062437-9062456 | None:intergenic | 10.0% |
| !!! | ATTTTTAAACAATTCAATAT+AGG | - | chr5_3:9062439-9062458 | Msa0796990:intron | 10.0% |
| !!! | ATAAATAAGATACCTTTTTT+GGG | + | chr5_3:9059914-9059933 | None:intergenic | 15.0% |
| !! | ATCATAAATTAAATTACCAA+TGG | + | chr5_3:9060204-9060223 | None:intergenic | 15.0% |
| !!! | ATTGGTAATTTAATTTATGA+TGG | - | chr5_3:9060203-9060222 | Msa0796990:intron | 15.0% |
| !!! | TTTGACTTGGATATTAATTA+GGG | - | chr5_3:9059010-9059029 | Msa0796990:intron | 20.0% |
| !!! | TCTATAGTTTTAATATTTCG+TGG | - | chr5_3:9059371-9059390 | Msa0796990:intron | 20.0% |
| !!! | TATGACATTTAGTGTTATTA+TGG | - | chr5_3:9059536-9059555 | Msa0796990:intron | 20.0% |
| !! | ATGTCTTAAAATAATCATGA+AGG | + | chr5_3:9059573-9059592 | None:intergenic | 20.0% |
| !! | TAAAAAGTCTCTAAATAAAC+AGG | + | chr5_3:9059832-9059851 | None:intergenic | 20.0% |
| !!! | GATAAATAAGATACCTTTTT+TGG | + | chr5_3:9059915-9059934 | None:intergenic | 20.0% |
| !! | TTTATCTATAAATAAACTGC+TGG | - | chr5_3:9059929-9059948 | Msa0796990:intron | 20.0% |
| !! | TTATCTATAAATAAACTGCT+GGG | - | chr5_3:9059930-9059949 | Msa0796990:intron | 20.0% |
| !!! | AAAAAATGAATGGTTTTATC+TGG | + | chr5_3:9060159-9060178 | None:intergenic | 20.0% |
| !! | AGAGAGAAAAAAAAAATGAA+TGG | + | chr5_3:9060169-9060188 | None:intergenic | 20.0% |
| !!! | TAAAAGAAATTTTAGCACAT+GGG | + | chr5_3:9060416-9060435 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAAGTAAATTGGT+TGG | - | chr5_3:9060838-9060857 | Msa0796990:CDS | 20.0% |
| !! | CTAAATCCTATACAAATATA+TGG | + | chr5_3:9061604-9061623 | None:intergenic | 20.0% |
| !! | CATATATTTGTATAGGATTT+AGG | - | chr5_3:9061602-9061621 | Msa0796990:intron | 20.0% |
| !!! | TAATATGCTTTAACTAGTTT+TGG | - | chr5_3:9061669-9061688 | Msa0796990:intron | 20.0% |
| !! | AATCATCATATAGCTAATTA+AGG | - | chr5_3:9062003-9062022 | Msa0796990:intron | 20.0% |
| !! | TAATTGAATATCATCTTTAG+AGG | - | chr5_3:9062027-9062046 | Msa0796990:intron | 20.0% |
| !! | GAAAACTATATAATCTGAAA+TGG | - | chr5_3:9062068-9062087 | Msa0796990:intron | 20.0% |
| !!! | TCATTATCAACATAATTTGT+TGG | - | chr5_3:9062101-9062120 | Msa0796990:intron | 20.0% |
| !!! | ATAACAAACTCTATTTTGAT+TGG | + | chr5_3:9062231-9062250 | None:intergenic | 20.0% |
| !!! | AGAAATATGCAGTAATTTTA+TGG | - | chr5_3:9062569-9062588 | Msa0796990:CDS | 20.0% |
| ! | AAGAATTCGACAAATTGTTA+TGG | - | chr5_3:9058589-9058608 | Msa0796990:CDS | 25.0% |
| ! | TTTCTTCATTATGTTGAAAC+TGG | - | chr5_3:9058643-9058662 | Msa0796990:intron | 25.0% |
| !! | TTTGACTCGAGTATTAATTA+CGG | - | chr5_3:9058721-9058740 | Msa0796990:intron | 25.0% |
| ! | CTACTTAAAAACACAAAAAG+TGG | + | chr5_3:9058821-9058840 | None:intergenic | 25.0% |
| ! | GGGATAGACTAAAATTATTA+GGG | + | chr5_3:9058922-9058941 | None:intergenic | 25.0% |
| ! | AGGGATAGACTAAAATTATT+AGG | + | chr5_3:9058923-9058942 | None:intergenic | 25.0% |
| !!! | TCATATGATTTTGTTTGACT+TGG | - | chr5_3:9058997-9059016 | Msa0796990:intron | 25.0% |
| !!! | GTTTGACTTGGATATTAATT+AGG | - | chr5_3:9059009-9059028 | Msa0796990:intron | 25.0% |
| ! | TTCATATTGAGTTTGAATGT+TGG | - | chr5_3:9059276-9059295 | Msa0796990:intron | 25.0% |
| !! | GAGCTTTTATTATATGTGTA+TGG | - | chr5_3:9059347-9059366 | Msa0796990:intron | 25.0% |
| !!! | GTTTTAATATTTCGTGGTTT+TGG | - | chr5_3:9059377-9059396 | Msa0796990:intron | 25.0% |
| ! | ATAATCATGAAGGATGAAAA+AGG | + | chr5_3:9059563-9059582 | None:intergenic | 25.0% |
| ! | ATAATCAGAACATATACATC+TGG | + | chr5_3:9059618-9059637 | None:intergenic | 25.0% |
| ! | CTCTTAATATTATAAGCCAT+TGG | - | chr5_3:9060185-9060204 | Msa0796990:intron | 25.0% |
| !!! | GTAAAAGAAATTTTAGCACA+TGG | + | chr5_3:9060417-9060436 | None:intergenic | 25.0% |
| ! | AAATACTTTCTTTGAGCAAT+AGG | + | chr5_3:9060723-9060742 | None:intergenic | 25.0% |
| !!! | TATTGCTCAAAGAAAGTATT+TGG | - | chr5_3:9060722-9060741 | Msa0796990:intron | 25.0% |
| ! | ACTTGAAAAAAATTATGGCT+CGG | + | chr5_3:9060830-9060849 | None:intergenic | 25.0% |
| ! | AGGATACTAATGCAATAAAA+AGG | - | chr5_3:9060879-9060898 | Msa0796990:intron | 25.0% |
| ! | TTAACTGTTGGACAAATTAA+TGG | - | chr5_3:9060985-9061004 | Msa0796990:intron | 25.0% |
| ! | AAAAAGTGAAACCATAAAGT+GGG | + | chr5_3:9061018-9061037 | None:intergenic | 25.0% |
| ! | TAAAAAGTGAAACCATAAAG+TGG | + | chr5_3:9061019-9061038 | None:intergenic | 25.0% |
| !!! | ATGGTTTCACTTTTTATGAT+TGG | - | chr5_3:9061023-9061042 | Msa0796990:CDS | 25.0% |
| !!! | TTTCACTTTTTATGATTGGT+TGG | - | chr5_3:9061027-9061046 | Msa0796990:CDS | 25.0% |
| ! | AGTCTTAAAGTATATGTCTT+TGG | - | chr5_3:9061053-9061072 | Msa0796990:CDS | 25.0% |
| ! | TTCTGTGATTAAGACAAAAT+TGG | - | chr5_3:9061182-9061201 | Msa0796990:intron | 25.0% |
| ! | TCTGTGATTAAGACAAAATT+GGG | - | chr5_3:9061183-9061202 | Msa0796990:intron | 25.0% |
| ! | TTCAAAAGGAAAACTAAATC+TGG | + | chr5_3:9061345-9061364 | None:intergenic | 25.0% |
| ! | CCAACATAAAACTATTCAAA+AGG | + | chr5_3:9061359-9061378 | None:intergenic | 25.0% |
| !!! | CCTTTTGAATAGTTTTATGT+TGG | - | chr5_3:9061356-9061375 | Msa0796990:intron | 25.0% |
| !! | AAGTACGAATTTTCATTGTA+AGG | + | chr5_3:9061726-9061745 | None:intergenic | 25.0% |
| ! | TATTCTCTGTGTAATATCTT+TGG | + | chr5_3:9061837-9061856 | None:intergenic | 25.0% |
| ! | TACACAGAGAATAAAAATGA+AGG | - | chr5_3:9061844-9061863 | Msa0796990:intron | 25.0% |
| ! | ACACAGAGAATAAAAATGAA+GGG | - | chr5_3:9061845-9061864 | Msa0796990:intron | 25.0% |
| ! | TTCAAATTAACAGTGGAAAT+AGG | + | chr5_3:9061930-9061949 | None:intergenic | 25.0% |
| ! | CAATAAACAAACATTAACAG+AGG | + | chr5_3:9062279-9062298 | None:intergenic | 25.0% |
| ! | CTCTGTTAATGTTTGTTTAT+TGG | - | chr5_3:9062277-9062296 | Msa0796990:intron | 25.0% |
| !! | AGAATTTTGGGTATGGTAAT+AGG | - | chr5_3:9058346-9058365 | Msa0796990:three_prime_UTR | 30.0% |
| TATGGTAATAGGTTTCAGAA+TGG | - | chr5_3:9058357-9058376 | Msa0796990:three_prime_UTR | 30.0% | |
| !! | AAAGGTTATTGCTTTTCAAG+AGG | - | chr5_3:9058443-9058462 | Msa0796990:three_prime_UTR | 30.0% |
| !! | TTATTGCTTTTCAAGAGGTA+TGG | - | chr5_3:9058448-9058467 | Msa0796990:three_prime_UTR | 30.0% |
| !! | TATTGCTTTTCAAGAGGTAT+GGG | - | chr5_3:9058449-9058468 | Msa0796990:three_prime_UTR | 30.0% |
| AGTCAAACAGTATACAATAG+TGG | - | chr5_3:9058851-9058870 | Msa0796990:intron | 30.0% | |
| GATGGAAAGGCTAAAATATT+AGG | + | chr5_3:9059213-9059232 | None:intergenic | 30.0% | |
| CAAAAAGTTCAAACAACAGA+TGG | + | chr5_3:9059231-9059250 | None:intergenic | 30.0% | |
| ! | TATACTGCTTTAGCGTTTTA+GGG | - | chr5_3:9059440-9059459 | Msa0796990:intron | 30.0% |
| GATACATACATTCCCAAAAA+AGG | - | chr5_3:9059899-9059918 | Msa0796990:intron | 30.0% | |
| !! | TTTTAGGTATTAGCAGCAAA+AGG | + | chr5_3:9060041-9060060 | None:intergenic | 30.0% |
| CTAATACCTAAAACAGACTT+AGG | - | chr5_3:9060048-9060067 | Msa0796990:intron | 30.0% | |
| !!! | CAAAATGGATGTTTTGAAGA+TGG | + | chr5_3:9060122-9060141 | None:intergenic | 30.0% |
| ! | TCTTCAAAACATCCATTTTG+TGG | - | chr5_3:9060122-9060141 | Msa0796990:intron | 30.0% |
| ! | TTTGAAATGTGTTTGCTCTT+AGG | - | chr5_3:9060296-9060315 | Msa0796990:intron | 30.0% |
| ACAGCTGAATTAAACTGAAA+TGG | + | chr5_3:9060381-9060400 | None:intergenic | 30.0% | |
| AGCCATGTAAATCATGTAAA+TGG | - | chr5_3:9060603-9060622 | Msa0796990:intron | 30.0% | |
| ! | TGCCATTTACATGATTTACA+TGG | + | chr5_3:9060608-9060627 | None:intergenic | 30.0% |
| GTAAATCATGTAAATGGCAA+TGG | - | chr5_3:9060609-9060628 | Msa0796990:intron | 30.0% | |
| TCATGAATCAGGATACAATA+TGG | - | chr5_3:9060633-9060652 | Msa0796990:intron | 30.0% | |
| CATGAATCAGGATACAATAT+GGG | - | chr5_3:9060634-9060653 | Msa0796990:intron | 30.0% | |
| AATGTAACCAATACAACAAC+AGG | - | chr5_3:9060679-9060698 | Msa0796990:intron | 30.0% | |
| GGAGAAGATATTGACAATAT+AGG | - | chr5_3:9060859-9060878 | Msa0796990:intron | 30.0% | |
| ! | AGGATGTGTGATTTTGTAAA+TGG | - | chr5_3:9060899-9060918 | Msa0796990:intron | 30.0% |
| ! | ATGTGTGATTTTGTAAATGG+AGG | - | chr5_3:9060902-9060921 | Msa0796990:intron | 30.0% |
| ! | TAATTTGTCCAACAGTTAAG+TGG | + | chr5_3:9060984-9061003 | None:intergenic | 30.0% |
| ! | ATGGAATTTTTCCCACTTTA+TGG | - | chr5_3:9061004-9061023 | Msa0796990:intron | 30.0% |
| TTTGGCAATTAGATGTTATC+TGG | - | chr5_3:9061071-9061090 | Msa0796990:intron | 30.0% | |
| TTGGCAATTAGATGTTATCT+GGG | - | chr5_3:9061072-9061091 | Msa0796990:intron | 30.0% | |
| CACAGAACAAAATTCAACAT+TGG | + | chr5_3:9061169-9061188 | None:intergenic | 30.0% | |
| CTGTGATTAAGACAAAATTG+GGG | - | chr5_3:9061184-9061203 | Msa0796990:intron | 30.0% | |
| TGTGATTAAGACAAAATTGG+GGG | - | chr5_3:9061185-9061204 | Msa0796990:intron | 30.0% | |
| ! | TGATGGAAAGAGATTTTATG+TGG | - | chr5_3:9061257-9061276 | Msa0796990:intron | 30.0% |
| ! | AGAGAAACTGCTAAAGTTTT+GGG | - | chr5_3:9061447-9061466 | Msa0796990:intron | 30.0% |
| ACAATGAAAATTCGTACTTC+TGG | - | chr5_3:9061727-9061746 | Msa0796990:intron | 30.0% | |
| ! | TTTAACTTCTGTGAAGTGTA+TGG | - | chr5_3:9061884-9061903 | Msa0796990:intron | 30.0% |
| CTGCAATTTCAAATTAACAG+TGG | + | chr5_3:9061937-9061956 | None:intergenic | 30.0% | |
| !! | TATCAACATAATTTGTTGGC+AGG | - | chr5_3:9062105-9062124 | Msa0796990:intron | 30.0% |
| !! | ATCAACATAATTTGTTGGCA+GGG | - | chr5_3:9062106-9062125 | Msa0796990:intron | 30.0% |
| CAAAGAAAGTGAGTATTACT+AGG | - | chr5_3:9062183-9062202 | Msa0796990:intron | 30.0% | |
| AAAATTAAGGGCAACTGTTA+AGG | + | chr5_3:9062424-9062443 | None:intergenic | 30.0% | |
| ACAATTCAATATAGGAAGCA+AGG | - | chr5_3:9062447-9062466 | Msa0796990:intron | 30.0% | |
| CAATTCAATATAGGAAGCAA+GGG | - | chr5_3:9062448-9062467 | Msa0796990:intron | 30.0% | |
| TGAAGAAACTCTGTCAAGAA+AGG | - | chr5_3:9058425-9058444 | Msa0796990:three_prime_UTR | 35.0% | |
| TTGCGTCATGCAATTTAAGT+AGG | - | chr5_3:9058501-9058520 | Msa0796990:exon | 35.0% | |
| TGCGTCATGCAATTTAAGTA+GGG | - | chr5_3:9058502-9058521 | Msa0796990:exon | 35.0% | |
| TCAAAAGTCCAAACAACAGA+GGG | + | chr5_3:9058942-9058961 | None:intergenic | 35.0% | |
| ! | GATGCTATTTGTCTACTGTT+TGG | + | chr5_3:9059146-9059165 | None:intergenic | 35.0% |
| !! | ACACTATCGAGATTTTAGGA+TGG | + | chr5_3:9059190-9059209 | None:intergenic | 35.0% |
| ! | TAGGACACTATCGAGATTTT+AGG | + | chr5_3:9059194-9059213 | None:intergenic | 35.0% |
| AGTTCAAACAACAGATGGAA+AGG | + | chr5_3:9059226-9059245 | None:intergenic | 35.0% | |
| ! | CTATACTGCTTTAGCGTTTT+AGG | - | chr5_3:9059439-9059458 | Msa0796990:intron | 35.0% |
| CAGAACATATACATCTGGAA+GGG | + | chr5_3:9059613-9059632 | None:intergenic | 35.0% | |
| TCAGAACATATACATCTGGA+AGG | + | chr5_3:9059614-9059633 | None:intergenic | 35.0% | |
| !!! | GTATTTTGATGATCGTAGCT+TGG | - | chr5_3:9059704-9059723 | Msa0796990:CDS | 35.0% |
| CTCCAATATCTTCAGTGATA+TGG | + | chr5_3:9059859-9059878 | None:intergenic | 35.0% | |
| GTATTAGCAGCAAAAGGAAA+AGG | + | chr5_3:9060035-9060054 | None:intergenic | 35.0% | |
| ! | CAAAACATCCATTTTGTGGT+AGG | - | chr5_3:9060126-9060145 | Msa0796990:intron | 35.0% |
| GTTGATTACCTACCACAAAA+TGG | + | chr5_3:9060137-9060156 | None:intergenic | 35.0% | |
| TTACCTTGTTCAGATTGTTG+CGG | + | chr5_3:9060266-9060285 | None:intergenic | 35.0% | |
| TGAGTTTAGTAGTGTAGTGA+TGG | - | chr5_3:9060355-9060374 | Msa0796990:intron | 35.0% | |
| !! | TTTTACGCAGATACTTGCTA+CGG | - | chr5_3:9060431-9060450 | Msa0796990:CDS | 35.0% |
| AAATCACTTTGTGGTCTTTC+TGG | + | chr5_3:9060534-9060553 | None:intergenic | 35.0% | |
| TTTGGTATCAAGCTGATTGT+AGG | - | chr5_3:9060740-9060759 | Msa0796990:intron | 35.0% | |
| TTGGTATCAAGCTGATTGTA+GGG | - | chr5_3:9060741-9060760 | Msa0796990:intron | 35.0% | |
| ATAGTCTCTTTACCTAGTCA+TGG | - | chr5_3:9060781-9060800 | Msa0796990:intron | 35.0% | |
| TACTTCTTCCACTTAACTGT+TGG | - | chr5_3:9060973-9060992 | Msa0796990:intron | 35.0% | |
| TTGGCATCAACATCATGTAT+CGG | + | chr5_3:9061150-9061169 | None:intergenic | 35.0% | |
| GGAGTTAAAAACAAGTTACG+AGG | - | chr5_3:9061278-9061297 | Msa0796990:intron | 35.0% | |
| GCAGTTGAATTATCATAACG+AGG | - | chr5_3:9061411-9061430 | Msa0796990:intron | 35.0% | |
| ! | GAGAGAAACTGCTAAAGTTT+TGG | - | chr5_3:9061446-9061465 | Msa0796990:intron | 35.0% |
| ! | AGGAGCTTATGGTAATGAAA+AGG | + | chr5_3:9061507-9061526 | None:intergenic | 35.0% |
| TCATGACATGCAAGTGAAAA+AGG | + | chr5_3:9061527-9061546 | None:intergenic | 35.0% | |
| TGCATGTCATGATTTCAACA+AGG | - | chr5_3:9061535-9061554 | Msa0796990:intron | 35.0% | |
| GGCGTTCCATATATTTGTAT+AGG | - | chr5_3:9061595-9061614 | Msa0796990:intron | 35.0% | |
| GCGTTTATAACAACACTTCT+TGG | - | chr5_3:9061759-9061778 | Msa0796990:intron | 35.0% | |
| GAATAAAAATGAAGGGCTAC+TGG | - | chr5_3:9061852-9061871 | Msa0796990:intron | 35.0% | |
| TGGAAATAGGAAACCAATAC+AGG | + | chr5_3:9061917-9061936 | None:intergenic | 35.0% | |
| TGGAAAGCCAAAAAAACAGA+TGG | + | chr5_3:9062211-9062230 | None:intergenic | 35.0% | |
| AAAGTGAAATTGTTCGGTCT+CGG | + | chr5_3:9062254-9062273 | None:intergenic | 35.0% | |
| GAGGCAAAAGTGAAATTGTT+CGG | + | chr5_3:9062260-9062279 | None:intergenic | 35.0% | |
| !! | AGGTGACTTGTTATTACATC+TGG | + | chr5_3:9062377-9062396 | None:intergenic | 35.0% |
| AGATGTAATAACAAGTCACC+TGG | - | chr5_3:9062376-9062395 | Msa0796990:intron | 35.0% | |
| AAAGTTCATCATCTGATCGA+AGG | + | chr5_3:9062498-9062517 | None:intergenic | 35.0% | |
| ! | TCGATCAGATGATGAACTTT+TGG | - | chr5_3:9062498-9062517 | Msa0796990:CDS | 35.0% |
| ! | CGATCAGATGATGAACTTTT+GGG | - | chr5_3:9062499-9062518 | Msa0796990:CDS | 35.0% |
| ! | AAATTCTGCCTCTGAGGATA+AGG | + | chr5_3:9058333-9058352 | None:intergenic | 40.0% |
| ! | TATCCTCAGAGGCAGAATTT+TGG | - | chr5_3:9058333-9058352 | Msa0796990:three_prime_UTR | 40.0% |
| ! | ATCCTCAGAGGCAGAATTTT+GGG | - | chr5_3:9058334-9058353 | Msa0796990:three_prime_UTR | 40.0% |
| GCGTCATGCAATTTAAGTAG+GGG | - | chr5_3:9058503-9058522 | Msa0796990:exon | 40.0% | |
| CGTCATGCAATTTAAGTAGG+GGG | - | chr5_3:9058504-9058523 | Msa0796990:exon | 40.0% | |
| TCATTATGTTGAAACTGGCG+AGG | - | chr5_3:9058648-9058667 | Msa0796990:intron | 40.0% | |
| AAACTGGCGAGGAAATCAAA+AGG | - | chr5_3:9058659-9058678 | Msa0796990:intron | 40.0% | |
| TTGTAGTCAATAGCAGCCAT+AGG | - | chr5_3:9058746-9058765 | Msa0796990:CDS | 40.0% | |
| TAGTCTATCCCTCTGTTGTT+TGG | - | chr5_3:9058931-9058950 | Msa0796990:intron | 40.0% | |
| GTCAAAAGTCCAAACAACAG+AGG | + | chr5_3:9058943-9058962 | None:intergenic | 40.0% | |
| TTGTAGTCAATAGCAGCCAT+AGG | - | chr5_3:9058746-9058765 | Msa0796990:CDS | 40.0% | |
| TACTCAAACACGCAAAGAAG+CGG | + | chr5_3:9059110-9059129 | None:intergenic | 40.0% | |
| TAGGATGGCTTCGTTTATTG+CGG | + | chr5_3:9059175-9059194 | None:intergenic | 40.0% | |
| CAGTATAGCGAATAGTCGTA+TGG | + | chr5_3:9059427-9059446 | None:intergenic | 40.0% | |
| CGCCATATCACTGAAGATAT+TGG | - | chr5_3:9059854-9059873 | Msa0796990:intron | 40.0% | |
| !! | ATTGGAGCTGATTTGAACGA+AGG | - | chr5_3:9059872-9059891 | Msa0796990:intron | 40.0% |
| ! | TCTGAGCCTAAGTCTGTTTT+AGG | + | chr5_3:9060057-9060076 | None:intergenic | 40.0% |
| AAAACAGACTTAGGCTCAGA+AGG | - | chr5_3:9060057-9060076 | Msa0796990:intron | 40.0% | |
| TTATATTCGCCATGAGCCTT+GGG | - | chr5_3:9060455-9060474 | Msa0796990:CDS | 40.0% | |
| ! | ATGGGAGTACACAAAAGGAA+TGG | - | chr5_3:9060480-9060499 | Msa0796990:intron | 40.0% |
| CTGCGATCTAAATCACTTTG+TGG | + | chr5_3:9060543-9060562 | None:intergenic | 40.0% | |
| CACAAAGTGATTTAGATCGC+AGG | - | chr5_3:9060541-9060560 | Msa0796990:intron | 40.0% | |
| AAAGTGATTTAGATCGCAGG+AGG | - | chr5_3:9060544-9060563 | Msa0796990:intron | 40.0% | |
| ATGGCAATGGATCATGAATC+AGG | - | chr5_3:9060622-9060641 | Msa0796990:intron | 40.0% | |
| ACAGCTACCTGTTGTTGTAT+TGG | + | chr5_3:9060689-9060708 | None:intergenic | 40.0% | |
| TACAACAACAGGTAGCTGTT+AGG | - | chr5_3:9060690-9060709 | Msa0796990:intron | 40.0% | |
| ACAACAACAGGTAGCTGTTA+GGG | - | chr5_3:9060691-9060710 | Msa0796990:intron | 40.0% | |
| TCTCTTTACCTAGTCATGGT+TGG | - | chr5_3:9060785-9060804 | Msa0796990:CDS | 40.0% | |
| GCAAGTGAAAAAGGAGCTTA+TGG | + | chr5_3:9061518-9061537 | None:intergenic | 40.0% | |
| GAATCTGCAAGCAAGAATAG+AGG | + | chr5_3:9061561-9061580 | None:intergenic | 40.0% | |
| ATCTGTTTCAGCTTACTCTC+TGG | - | chr5_3:9061696-9061715 | Msa0796990:intron | 40.0% | |
| AACTTCTGTGAAGTGTATGG+TGG | - | chr5_3:9061887-9061906 | Msa0796990:intron | 40.0% | |
| AAATTGCAGTAATCACCCAG+CGG | - | chr5_3:9061948-9061967 | Msa0796990:intron | 40.0% | |
| !! | AACATAATTTGTTGGCAGGG+TGG | - | chr5_3:9062109-9062128 | Msa0796990:intron | 40.0% |
| !! | GAGGTATTATGCTGGCTTTA+TGG | - | chr5_3:9062154-9062173 | Msa0796990:intron | 40.0% |
| !!! | CTAGGCACCATCTGTTTTTT+TGG | - | chr5_3:9062201-9062220 | Msa0796990:intron | 40.0% |
| AGAAGTTCCAAACGGTTGAA+AGG | + | chr5_3:9062338-9062357 | None:intergenic | 40.0% | |
| ! | CAATTTTTCACAACAGCTCC+AGG | + | chr5_3:9062397-9062416 | None:intergenic | 40.0% |
| TACCCAAAATTCTGCCTCTG+AGG | + | chr5_3:9058339-9058358 | None:intergenic | 45.0% | |
| !! | CAGAGGCAGAATTTTGGGTA+TGG | - | chr5_3:9058339-9058358 | Msa0796990:three_prime_UTR | 45.0% |
| CAGAGACAAAACGTTCATCG+CGG | + | chr5_3:9058386-9058405 | None:intergenic | 45.0% | |
| AGCAGCTATAGCAATGCCTA+TGG | + | chr5_3:9058765-9058784 | None:intergenic | 45.0% | |
| ! | TTGGCCTTCCCATACTTTGA+TGG | - | chr5_3:9059396-9059415 | Msa0796990:intron | 45.0% |
| CACTCCATCAAAGTATGGGA+AGG | + | chr5_3:9059403-9059422 | None:intergenic | 45.0% | |
| CTTCCCATACTTTGATGGAG+TGG | - | chr5_3:9059401-9059420 | Msa0796990:intron | 45.0% | |
| TGGCCACTCCATCAAAGTAT+GGG | + | chr5_3:9059407-9059426 | None:intergenic | 45.0% | |
| ATGGCCACTCCATCAAAGTA+TGG | + | chr5_3:9059408-9059427 | None:intergenic | 45.0% | |
| ! | CTATCCACCATTGACTGCAT+AGG | - | chr5_3:9059480-9059499 | Msa0796990:CDS | 45.0% |
| TCATCCTATGCAGTCAATGG+TGG | + | chr5_3:9059487-9059506 | None:intergenic | 45.0% | |
| ! | CCATTGACTGCATAGGATGA+CGG | - | chr5_3:9059487-9059506 | Msa0796990:CDS | 45.0% |
| CTATAGCAGGCAAGTTCACA+AGG | + | chr5_3:9059663-9059682 | None:intergenic | 45.0% | |
| TAGCTTGGTAAGCGCTAGTT+GGG | - | chr5_3:9059719-9059738 | Msa0796990:CDS | 45.0% | |
| GACTTAGGCTCAGAAGGTTA+TGG | - | chr5_3:9060063-9060082 | Msa0796990:intron | 45.0% | |
| GTACCGCAACAATCTGAACA+AGG | - | chr5_3:9060260-9060279 | Msa0796990:intron | 45.0% | |
| CTTATATTCGCCATGAGCCT+TGG | - | chr5_3:9060454-9060473 | Msa0796990:CDS | 45.0% | |
| TTGTGTACTCCCATTTCCCA+AGG | + | chr5_3:9060474-9060493 | None:intergenic | 45.0% | |
| ! | GGGAAATGGGAGTACACAAA+AGG | - | chr5_3:9060475-9060494 | Msa0796990:intron | 45.0% |
| CAACAACAGGTAGCTGTTAG+GGG | - | chr5_3:9060692-9060711 | Msa0796990:intron | 45.0% | |
| GACACTATCCAACCATGACT+AGG | + | chr5_3:9060796-9060815 | None:intergenic | 45.0% | |
| TCTCAGCACCCATCAAGATA+CGG | + | chr5_3:9061215-9061234 | None:intergenic | 45.0% | |
| !! | TATCTTGATGGGTGCTGAGA+TGG | - | chr5_3:9061215-9061234 | Msa0796990:CDS | 45.0% |
| TGCTGTGATACGACTACTGA+TGG | - | chr5_3:9061240-9061259 | Msa0796990:CDS | 45.0% | |
| CTTGCAGATTCAGTCATTCC+TGG | - | chr5_3:9061570-9061589 | Msa0796990:intron | 45.0% | |
| AAATATATGGAACGCCTGCC+AGG | + | chr5_3:9061591-9061610 | None:intergenic | 45.0% | |
| CAGCACAAGATCACAGATTG+CGG | + | chr5_3:9061644-9061663 | None:intergenic | 45.0% | |
| ACACTTCTTGGCTGTCATAC+AGG | - | chr5_3:9061771-9061790 | Msa0796990:intron | 45.0% | |
| CACTTCTTGGCTGTCATACA+GGG | - | chr5_3:9061772-9061791 | Msa0796990:intron | 45.0% | |
| GCATTTCAGTCCGAACAAGA+CGG | + | chr5_3:9061808-9061827 | None:intergenic | 45.0% | |
| AAAAATGAAGGGCTACTGGC+AGG | - | chr5_3:9061856-9061875 | Msa0796990:intron | 45.0% | |
| GTATGGTGGCAAACCTGTAT+TGG | - | chr5_3:9061901-9061920 | Msa0796990:intron | 45.0% | |
| AGTTCCAAACGGTTGAAAGG+TGG | + | chr5_3:9062335-9062354 | None:intergenic | 45.0% | |
| GAGCTTGCAGAAGTTCCAAA+CGG | + | chr5_3:9062346-9062365 | None:intergenic | 45.0% | |
| !! | ATCATCTGATCGAAGGTGCT+GGG | + | chr5_3:9062491-9062510 | None:intergenic | 45.0% |
| !! | AAATTGTTAAATAAAAATAT+AGG | + | chr5_3:9061480-9061499 | None:intergenic | 5.0% |
| AGACAAAACGTTCATCGCGG+TGG | + | chr5_3:9058383-9058402 | None:intergenic | 50.0% | |
| !! | AGCCATAGGTGTCGCTATAG+TGG | - | chr5_3:9059049-9059068 | Msa0796990:intron | 50.0% |
| AGCCACTATAGCGACACCTA+TGG | + | chr5_3:9059054-9059073 | None:intergenic | 50.0% | |
| ! | TGGTGGATAGCAGAGCAAAG+TGG | + | chr5_3:9059470-9059489 | None:intergenic | 50.0% |
| CCGTCATCCTATGCAGTCAA+TGG | + | chr5_3:9059490-9059509 | None:intergenic | 50.0% | |
| TGCTATAGTCGTGCAGAAGG+CGG | - | chr5_3:9059675-9059694 | Msa0796990:CDS | 50.0% | |
| GTAGCTTGGTAAGCGCTAGT+TGG | - | chr5_3:9059718-9059737 | Msa0796990:CDS | 50.0% | |
| !! | TTCTGGGATCTTCAGTGGCA+AGG | + | chr5_3:9061113-9061132 | None:intergenic | 50.0% |
| !! | TGCTCTTCTGGGATCTTCAG+TGG | + | chr5_3:9061118-9061137 | None:intergenic | 50.0% |
| GAAGATCCCAGAAGAGCAGA+CGG | - | chr5_3:9061120-9061139 | Msa0796990:intron | 50.0% | |
| CAGATTCAGTCATTCCTGGC+AGG | - | chr5_3:9061574-9061593 | Msa0796990:intron | 50.0% | |
| CTGTCATACAGGGATGATGC+AGG | - | chr5_3:9061782-9061801 | Msa0796990:intron | 50.0% | |
| ! | ATGATGCAGGCCGTCTTGTT+CGG | - | chr5_3:9061795-9061814 | Msa0796990:intron | 50.0% |
| CGTGTTAATGCAGATCCGCT+GGG | + | chr5_3:9061966-9061985 | None:intergenic | 50.0% | |
| ACGTGTTAATGCAGATCCGC+TGG | + | chr5_3:9061967-9061986 | None:intergenic | 50.0% | |
| ! | TTGCGGACGAGGTATTATGC+TGG | - | chr5_3:9062146-9062165 | Msa0796990:intron | 50.0% |
| ! | CATCATCTGATCGAAGGTGC+TGG | + | chr5_3:9062492-9062511 | None:intergenic | 50.0% |
| TGAGGATAAGGTCCAGGACG+CGG | + | chr5_3:9058321-9058340 | None:intergenic | 55.0% | |
| GTCCTGGACCTTATCCTCAG+AGG | - | chr5_3:9058322-9058341 | Msa0796990:three_prime_UTR | 55.0% | |
| ! | TGCCTCTGAGGATAAGGTCC+AGG | + | chr5_3:9058327-9058346 | None:intergenic | 55.0% |
| ! | GCTATAGCTGCTTTGCGCTG+TGG | - | chr5_3:9058773-9058792 | Msa0796990:CDS | 55.0% |
| ! | GAGTATCGTGTAGCGCCTAG+AGG | + | chr5_3:9058799-9058818 | None:intergenic | 55.0% |
| GTGTTTCATGTAGCGCCTGG+AGG | + | chr5_3:9059088-9059107 | None:intergenic | 55.0% | |
| GCCTGCTATAGTCGTGCAGA+AGG | - | chr5_3:9059672-9059691 | Msa0796990:CDS | 55.0% | |
| GCCTTCTGCACGACTATAGC+AGG | + | chr5_3:9059676-9059695 | None:intergenic | 55.0% | |
| GCTATAGTCGTGCAGAAGGC+GGG | - | chr5_3:9059676-9059695 | Msa0796990:CDS | 55.0% | |
| CTATAGTCGTGCAGAAGGCG+GGG | - | chr5_3:9059677-9059696 | Msa0796990:CDS | 55.0% | |
| TCGCCATGAGCCTTGGGAAA+TGG | - | chr5_3:9060461-9060480 | Msa0796990:CDS | 55.0% | |
| CGCCATGAGCCTTGGGAAAT+GGG | - | chr5_3:9060462-9060481 | Msa0796990:CDS | 55.0% | |
| CTCCCATTTCCCAAGGCTCA+TGG | + | chr5_3:9060467-9060486 | None:intergenic | 55.0% | |
| GGGGCTCACCGTATCTTGAT+GGG | - | chr5_3:9061204-9061223 | Msa0796990:CDS | 55.0% | |
| TGCTTTGCGCTGTGGCCTCT+AGG | - | chr5_3:9058781-9058800 | Msa0796990:CDS | 60.0% | |
| GCGGTGTTTCATGTAGCGCC+TGG | + | chr5_3:9059091-9059110 | None:intergenic | 60.0% | |
| GGCTCTCCGTCTGCTCTTCT+GGG | + | chr5_3:9061129-9061148 | None:intergenic | 60.0% | |
| GGGGGCTCACCGTATCTTGA+TGG | - | chr5_3:9061203-9061222 | Msa0796990:CDS | 60.0% | |
| TGGAGTGTGCCTGGCGTTTG+CGG | - | chr5_3:9062129-9062148 | Msa0796990:intron | 60.0% | |
| ATACCTCGTCCGCAAACGCC+AGG | + | chr5_3:9062141-9062160 | None:intergenic | 60.0% | |
| CGCGCCACCTTTCAACCGTT+TGG | - | chr5_3:9062328-9062347 | Msa0796990:intron | 60.0% | |
| GCTGGCATTCTTCCGCGTCC+TGG | - | chr5_3:9058306-9058325 | Msa0796990:three_prime_UTR | 65.0% | |
| GGCTTTGCGCTGTAGCCTCC+AGG | - | chr5_3:9059070-9059089 | Msa0796990:CDS | 65.0% | |
| CGGCTCTCCGTCTGCTCTTC+TGG | + | chr5_3:9061130-9061149 | None:intergenic | 65.0% | |
| TTGGCAGGGTGGAGTGTGCC+TGG | - | chr5_3:9062120-9062139 | Msa0796990:intron | 65.0% | |
| GTGCCTGGCGTTTGCGGACG+AGG | - | chr5_3:9062135-9062154 | Msa0796990:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 9058295 | 9062633 | 9058295 | ID=Msa0796990;Name=Msa0796990 |
| chr5_3 | mRNA | 9058295 | 9062633 | 9058295 | ID=Msa0796990-mRNA-1;Parent=Msa0796990;Name=Msa0796990-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.81|0.75|1|0.90|0.91|12|224|348 |
| chr5_3 | exon | 9058295 | 9058622 | 9058295 | ID=Msa0796990-mRNA-1:exon:3867;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9058738 | 9058801 | 9058738 | ID=Msa0796990-mRNA-1:exon:3866;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9059051 | 9059135 | 9059051 | ID=Msa0796990-mRNA-1:exon:3865;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9059467 | 9059513 | 9059467 | ID=Msa0796990-mRNA-1:exon:3864;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9059629 | 9059845 | 9059629 | ID=Msa0796990-mRNA-1:exon:3863;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9060363 | 9060487 | 9060363 | ID=Msa0796990-mRNA-1:exon:3862;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9060647 | 9060670 | 9060647 | ID=Msa0796990-mRNA-1:exon:3861;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9060785 | 9060864 | 9060785 | ID=Msa0796990-mRNA-1:exon:3860;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9061008 | 9061086 | 9061008 | ID=Msa0796990-mRNA-1:exon:3859;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9061203 | 9061268 | 9061203 | ID=Msa0796990-mRNA-1:exon:3858;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9062464 | 9062553 | 9062464 | ID=Msa0796990-mRNA-1:exon:3857;Parent=Msa0796990-mRNA-1 |
| chr5_3 | exon | 9062568 | 9062633 | 9062568 | ID=Msa0796990-mRNA-1:exon:3856;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9062568 | 9062633 | 9062568 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9062464 | 9062553 | 9062464 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9061203 | 9061268 | 9061203 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9061008 | 9061086 | 9061008 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9060785 | 9060864 | 9060785 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9060647 | 9060670 | 9060647 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9060363 | 9060487 | 9060363 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9059629 | 9059845 | 9059629 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9059467 | 9059513 | 9059467 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9059051 | 9059135 | 9059051 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9058738 | 9058801 | 9058738 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | CDS | 9058519 | 9058622 | 9058519 | ID=Msa0796990-mRNA-1:cds;Parent=Msa0796990-mRNA-1 |
| chr5_3 | three_prime_UTR | 9058295 | 9058518 | 9058295 | ID=Msa0796990-mRNA-1:three_prime_utr;Parent=Msa0796990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
