AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0796980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0796980 MtrunA17_Chr5g0399941 98.157 434 6 1 58 491 81 512 0.0 898
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0796980 AT4G17620.1 73.050 423 109 2 71 491 114 533 0.0 612
Msa0796980 AT4G17620.2 72.577 423 111 2 71 491 114 533 0.0 605
Msa0796980 AT4G17620.3 71.631 423 107 3 71 491 114 525 0.0 590

Find 206 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCTCTCCGTCTGCTCTTC+TGG 0.061101 5_3:+9051327 None:intergenic
AAATCACTTTGTGGTCTTTC+TGG 0.112221 5_3:+9051924 None:intergenic
CATATATTTGTATTGGATTT+AGG 0.136579 5_3:-9050852 Msa0796980:intron
TTCTGTGATTAAGACAAAAT+TGG 0.167983 5_3:-9051272 Msa0796980:CDS
CCTAACAATATCGGCATTAT+TGG 0.175632 5_3:+9056115 None:intergenic
TTTGGCAATTAGATGTTATC+TGG 0.198464 5_3:-9051383 Msa0796980:intron
CTGCATAAACGTGTTTATTA+AGG 0.215344 5_3:-9049789 Msa0796980:three_prime_UTR
TATCCTCAGAGGCAGAATTT+TGG 0.221848 5_3:-9054125 Msa0796980:CDS
GACAGAAACTGCTAAAGTTT+TGG 0.224554 5_3:-9051008 Msa0796980:CDS
TCGATCAGATGATGAACTTT+TGG 0.232351 5_3:-9049953 Msa0796980:three_prime_UTR
TATTCTCTGTGTAATATCTT+TGG 0.238375 5_3:+9050620 None:intergenic
TGTCCATGTGAATACTTAAT+TGG 0.239605 5_3:+9056085 None:intergenic
AACGATGATGAAGATGATTT+TGG 0.245066 5_3:+9056609 None:intergenic
TAAGGCTTTGTTTGCGTGTT+TGG 0.253970 5_3:-9049771 Msa0796980:three_prime_UTR
CAAAGAAGAAGAAGAGAATA+AGG 0.260848 5_3:-9056567 Msa0796980:five_prime_UTR
CCGTGAAATCCATTTGTTTA+CGG 0.268537 5_3:+9055601 None:intergenic
GCAGATTCCTCTTCCGATAC+TGG 0.272506 5_3:-9055447 Msa0796980:CDS
GAGGTATTATGCTGGCTTTA+TGG 0.299092 5_3:-9050300 Msa0796980:CDS
CGCCATATCACTGAAGATAT+TGG 0.313720 5_3:-9052600 Msa0796980:CDS
GTTGATTACCTACCACAAAA+TGG 0.317863 5_3:+9052320 None:intergenic
GGCTCTCCGTCTGCTCTTCT+GGG 0.318433 5_3:+9051328 None:intergenic
TTTACCACCGTTGATTGTTC+TGG 0.320787 5_3:+9056413 None:intergenic
CGCGCCACCTTTCAACCGTT+TGG 0.326781 5_3:-9050123 Msa0796980:CDS
CTCCAATATCTTCAGTGATA+TGG 0.332949 5_3:+9052598 None:intergenic
TCTGTGATTAAGACAAAATT+GGG 0.335148 5_3:-9051271 Msa0796980:CDS
CTTGCAGATTCAGTCATTCC+TGG 0.335151 5_3:-9050884 Msa0796980:intron
CTAAATCCAATACAAATATA+TGG 0.337022 5_3:+9050853 None:intergenic
TGAAAACAGGACACATTTCC+TGG 0.338532 5_3:-9055885 Msa0796980:five_prime_UTR
GGCGTTCCATATATTTGTAT+TGG 0.340051 5_3:-9050859 Msa0796980:CDS
AAAATTAAGGGCAACTGTTA+AGG 0.353311 5_3:+9050030 None:intergenic
CCGGGTTGTTCGTATTATTA+CGG 0.353547 5_3:+9054231 None:intergenic
CGCCATGAGCCTTGGGAAAT+GGG 0.358477 5_3:-9051993 Msa0796980:CDS
TCGCCATGAGCCTTGGGAAA+TGG 0.363810 5_3:-9051994 Msa0796980:CDS
AGAGGAATCTGCGGAACCTT+TGG 0.369292 5_3:+9055458 None:intergenic
CCAATAATGCCGATATTGTT+AGG 0.370814 5_3:-9056115 Msa0796980:five_prime_UTR
GGAGAATAATTACCAGGAAT+AGG 0.373979 5_3:+9055269 None:intergenic
AGGTGACTTGTTATTACATC+TGG 0.374070 5_3:+9050077 None:intergenic
GTAAGGAAGGAGAGGACTTA+AGG 0.374651 5_3:-9049746 Msa0796980:three_prime_UTR
ATTAATAGTAATTTGAAAAC+AGG 0.396143 5_3:-9055898 Msa0796980:five_prime_UTR
GCACTGGTTCTGTATGTAAC+TGG 0.396523 5_3:-9055844 Msa0796980:five_prime_UTR
GGTCATTTCCATGTGTCAAT+TGG 0.400684 5_3:-9055751 Msa0796980:five_prime_UTR
AACTACCGCCAGGGGCAATA+TGG 0.403580 5_3:-9055772 Msa0796980:five_prime_UTR
CTTATATTCGCCATGAGCCT+TGG 0.404077 5_3:-9052001 Msa0796980:CDS
AACGGATGCAACCTCCGCTT+TGG 0.407307 5_3:+9056497 None:intergenic
GAACCAGTGCAGTCTGTAAC+TGG 0.410433 5_3:+9055857 None:intergenic
GCTGGCATTCTTCCGCGTCC+TGG 0.412844 5_3:-9054152 Msa0796980:CDS
AAATTCTGCCTCTGAGGATA+AGG 0.415076 5_3:+9054128 None:intergenic
GGTATACCGCCTAACAATAT+CGG 0.420127 5_3:+9056106 None:intergenic
TTGGCAGGGTGGAGTGTGCC+TGG 0.423068 5_3:-9050334 Msa0796980:intron
GAGAATAATTACCAGGAATA+GGG 0.425040 5_3:+9055270 None:intergenic
AAAAGTCCTTACCCTATTCC+TGG 0.426749 5_3:-9055281 Msa0796980:intron
GATGAATGTCCGTGCTTCAT+AGG 0.433067 5_3:-9055926 Msa0796980:five_prime_UTR
CAATCAACGGTGGTAAAGAT+AGG 0.440893 5_3:-9056407 Msa0796980:five_prime_UTR
AAATATATGGAACGCCTGCC+AGG 0.440933 5_3:+9050866 None:intergenic
GGCGGTGATGATGAAGAAAA+TGG 0.444517 5_3:-9055402 Msa0796980:CDS
CTGCGATCTAAATCACTTTG+TGG 0.446570 5_3:+9051915 None:intergenic
TTATATTCGCCATGAGCCTT+GGG 0.449517 5_3:-9052000 Msa0796980:CDS
CATAAGAGACCGTAAACAAA+TGG 0.450538 5_3:-9055610 Msa0796980:five_prime_UTR
GCTATAGTCGTGCAGAAGGC+GGG 0.453075 5_3:-9052778 Msa0796980:CDS
TGTTTGCGTGTTTGGAGGTA+AGG 0.454477 5_3:-9049763 Msa0796980:three_prime_UTR
AGGGTCCCTATGATCTTTAA+CGG 0.457981 5_3:+9056362 None:intergenic
GGTCCCATCTTTATCGTTGT+AGG 0.459927 5_3:+9055554 None:intergenic
GCACGGACATTCATCGGATT+AGG 0.467517 5_3:+9055934 None:intergenic
CCGTAAACAAATGGATTTCA+CGG 0.470258 5_3:-9055601 Msa0796980:five_prime_UTR
GGCTTTGTTTGCGTGTTTGG+AGG 0.472568 5_3:-9049768 Msa0796980:three_prime_UTR
ACTAGCTCCGCTTCCAGTAT+CGG 0.472911 5_3:+9055434 None:intergenic
CATCATCTGATCGAAGGTGC+TGG 0.473531 5_3:+9049962 None:intergenic
GTGATTATGTACAGAGAAAG+AGG 0.473547 5_3:-9056531 Msa0796980:five_prime_UTR
GACTTAGGCTCAGAAGGTTA+TGG 0.475541 5_3:-9052391 Msa0796980:CDS
GAAGAAAATGGTGATGTTGT+TGG 0.478098 5_3:-9055390 Msa0796980:CDS
GTTGATTCGTTTCCGATCAA+CGG 0.479060 5_3:+9056479 None:intergenic
GTTGTTCGTATTATTACGGA+TGG 0.484281 5_3:+9054235 None:intergenic
GAAAATGACGTAATCCAGTC+TGG 0.484299 5_3:-9056004 Msa0796980:five_prime_UTR
ATGATGCAGGCCATCTTGTT+CGG 0.484991 5_3:-9050659 Msa0796980:CDS
AGCGGAGCTAGTAGCGGCGG+TGG 0.486689 5_3:-9055423 Msa0796980:CDS
ACCGTTGATTGTTCTGGAAG+TGG 0.488047 5_3:+9056419 None:intergenic
TGCGTGTTTGGAGGTAAGGA+AGG 0.488333 5_3:-9049759 Msa0796980:three_prime_UTR
TGTAGGAATCTTCGCCGAAA+AGG 0.490618 5_3:+9055571 None:intergenic
AACTACCAGTAGGTAGTTGT+AGG 0.494593 5_3:-9056149 Msa0796980:five_prime_UTR
TCCGCAGCTTCTTCCTCCAA+AGG 0.495225 5_3:-9055474 Msa0796980:CDS
TTTAACCGTTAAAGATCATA+GGG 0.495548 5_3:-9056367 Msa0796980:five_prime_UTR
TTCTGGGATCTTCAGTGGCA+AGG 0.495567 5_3:+9051344 None:intergenic
TGGCGGTAGTTAACTACCGC+TGG 0.497034 5_3:+9055784 None:intergenic
TATGAAGCACGGACATTCAT+CGG 0.499394 5_3:+9055928 None:intergenic
GGAGCTAGTAGCGGCGGTGG+CGG 0.501096 5_3:-9055420 Msa0796980:CDS
GCCTTCTGCACGACTATAGC+AGG 0.501287 5_3:+9052781 None:intergenic
GGAATCTGCGGAACCTTTGG+AGG 0.502880 5_3:+9055461 None:intergenic
GATTCCTACAACGATAAAGA+TGG 0.503955 5_3:-9055558 Msa0796980:exon
ACCGACGCGTGTCTGACATT+GGG 0.505160 5_3:-9055960 Msa0796980:five_prime_UTR
GGGGTGGTGGACGTGGTCGT+TGG 0.505862 5_3:-9054202 Msa0796980:CDS
TTGTGTACTCCCATTTCCCA+AGG 0.506004 5_3:+9051984 None:intergenic
TTGGCAATTAGATGTTATCT+GGG 0.506474 5_3:-9051382 Msa0796980:intron
AGAAGAAGATGAAGCGGCGG+AGG 0.507252 5_3:+9055506 None:intergenic
AAGAAGACGAAGAAGAAGAG+TGG 0.510048 5_3:+9055532 None:intergenic
CAGCATAATGATAGAGGAGC+TGG 0.510421 5_3:-9054170 Msa0796980:CDS
ACAATTCAATATAGGAAGCA+AGG 0.513666 5_3:-9050004 Msa0796980:three_prime_UTR
TGCTATAGTCGTGCAGAAGG+CGG 0.514503 5_3:-9052779 Msa0796980:CDS
TGAAGAAACTCTGTCAAGAA+AGG 0.514756 5_3:-9054033 Msa0796980:CDS
TGGAGAGAGTGTTGGAGCGA+GGG 0.515263 5_3:+9056343 None:intergenic
GGACGTGGTCGTTGGCAACA+AGG 0.516272 5_3:-9054194 Msa0796980:CDS
CTCCCATTTCCCAAGGCTCA+TGG 0.517450 5_3:+9051991 None:intergenic
CAAGGGCAGCATAATGATAG+AGG 0.517610 5_3:-9054176 Msa0796980:CDS
GTGCCTGGCGTTTGCGAATG+AGG 0.518093 5_3:-9050319 Msa0796980:CDS
AATACGAACAACCCGGGAAG+AGG 0.518689 5_3:-9054224 Msa0796980:CDS
TACCGACGCGTGTCTGACAT+TGG 0.520092 5_3:-9055961 Msa0796980:five_prime_UTR
AGCGGTAGTTAACTACCGCC+AGG 0.521241 5_3:-9055782 Msa0796980:five_prime_UTR
CATGATGATAGAGATCTGTT+TGG 0.524184 5_3:-9055338 Msa0796980:CDS
TGCCTCTGAGGATAAGGTCC+AGG 0.524197 5_3:+9054134 None:intergenic
ATCATCTGATCGAAGGTGCT+GGG 0.525350 5_3:+9049963 None:intergenic
TACAGAGAAAGAGGAGGCGT+TGG 0.525464 5_3:-9056522 Msa0796980:five_prime_UTR
TCCTCTTCCGATACTGGAAG+CGG 0.526385 5_3:-9055441 Msa0796980:CDS
TATCTTGATGGGTGCTGAGA+TGG 0.529076 5_3:-9051239 Msa0796980:CDS
CGGAGGTTGCATCCGTTGAT+CGG 0.530815 5_3:-9056491 Msa0796980:five_prime_UTR
CAGATTCAGTCATTCCTGGC+AGG 0.531148 5_3:-9050880 Msa0796980:CDS
TGCTGTGATACGACTACTGA+TGG 0.531330 5_3:-9051214 Msa0796980:CDS
CGGTTGTTAACAACCGCTGC+CGG 0.539888 5_3:-9055815 Msa0796980:five_prime_UTR
CGGCATTATTGGTTGAGCTA+AGG 0.540874 5_3:+9056126 None:intergenic
GGGAAATGGGAGTACACAAA+AGG 0.545125 5_3:-9051980 Msa0796980:CDS
ATACGAACAACCCGGGAAGA+GGG 0.552800 5_3:-9054223 Msa0796980:CDS
ATACCTCATTCGCAAACGCC+AGG 0.554837 5_3:+9050316 None:intergenic
CGTAAACAAATGGATTTCAC+GGG 0.554879 5_3:-9055600 Msa0796980:five_prime_UTR
GGGGCTCACCGTATCTTGAT+GGG 0.555557 5_3:-9051250 Msa0796980:CDS
AGAAGTTCCAAACGGTTGAA+AGG 0.557237 5_3:+9050116 None:intergenic
TTGCGAATGAGGTATTATGC+TGG 0.559796 5_3:-9050308 Msa0796980:CDS
AAAACAGACTTAGGCTCAGA+AGG 0.561278 5_3:-9052397 Msa0796980:intron
CTGTCATACAGGGATGATGC+AGG 0.562157 5_3:-9050672 Msa0796980:intron
CAATTCAATATAGGAAGCAA+GGG 0.563974 5_3:-9050003 Msa0796980:three_prime_UTR
GCTGGGAAACACGCCGGCAG+CGG 0.564827 5_3:+9055802 None:intergenic
ACGAACAACCCGGGAAGAGG+GGG 0.566118 5_3:-9054221 Msa0796980:CDS
TAATTACCAGGAATAGGGTA+AGG 0.568716 5_3:+9055275 None:intergenic
GGAAATGACCATATTGCCCC+TGG 0.569745 5_3:+9055764 None:intergenic
TGCTCTTCTGGGATCTTCAG+TGG 0.571759 5_3:+9051339 None:intergenic
TGTCAGGAATAGAATAGAGG+TGG 0.572687 5_3:-9056723 Msa0796980:five_prime_UTR
CACAAAGTGATTTAGATCGC+AGG 0.574140 5_3:-9051914 Msa0796980:CDS
TCCGCTTCCAGTATCGGAAG+AGG 0.574956 5_3:+9055440 None:intergenic
TGAGGATAAGGTCCAGGACG+CGG 0.577599 5_3:+9054140 None:intergenic
CTATAGTCGTGCAGAAGGCG+GGG 0.578781 5_3:-9052777 Msa0796980:CDS
GCATTTCAGTCCGAACAAGA+TGG 0.579364 5_3:+9050649 None:intergenic
AGAAGACGAAGAAGAAGAGT+GGG 0.579385 5_3:+9055533 None:intergenic
GACGTGGTCGTTGGCAACAA+GGG 0.579752 5_3:-9054193 Msa0796980:CDS
TTGGAGAGAGTGTTGGAGCG+AGG 0.579784 5_3:+9056342 None:intergenic
GAAGATCCCAGAAGAGCAGA+CGG 0.581979 5_3:-9051334 Msa0796980:CDS
ATTGGAGCTGATTTGAACGA+AGG 0.584782 5_3:-9052582 Msa0796980:CDS
CTGGATACAATTGTCAGTGT+CGG 0.584822 5_3:-9055985 Msa0796980:five_prime_UTR
CTATAGCAGGCAAGTTCACA+AGG 0.584854 5_3:+9052794 None:intergenic
TACGAACAACCCGGGAAGAG+GGG 0.585770 5_3:-9054222 Msa0796980:CDS
CACAGAACAAAATTCAACAT+TGG 0.586435 5_3:+9051288 None:intergenic
ATTCCTACAACGATAAAGAT+GGG 0.587838 5_3:-9055557 Msa0796980:exon
GCCTGCTATAGTCGTGCAGA+AGG 0.591701 5_3:-9052782 Msa0796980:CDS
TAAGGCCTACAACTACCTAC+TGG 0.595611 5_3:+9056144 None:intergenic
ACTGACAATTGTATCCAGAC+TGG 0.598371 5_3:+9055990 None:intergenic
TGAAGAAGAAGAAGATGAAG+CGG 0.600459 5_3:+9055500 None:intergenic
GAGCTTGCAGAAGTTCCAAA+CGG 0.601546 5_3:+9050108 None:intergenic
TACCCAAAATTCTGCCTCTG+AGG 0.603135 5_3:+9054122 None:intergenic
GGCGGTAGTTAACTACCGCT+GGG 0.604336 5_3:+9055785 None:intergenic
TCTCAGCACCCATCAAGATA+CGG 0.605709 5_3:+9051242 None:intergenic
TTGGCATCAACATCATGTAT+CGG 0.605933 5_3:+9051307 None:intergenic
CCGTAATAATACGAACAACC+CGG 0.607451 5_3:-9054231 Msa0796980:CDS
AGATGTAATAACAAGTCACC+TGG 0.607473 5_3:-9050075 Msa0796980:CDS
ACAAATGGATTTCACGGGGA+AGG 0.608715 5_3:-9055595 Msa0796980:five_prime_UTR
ACCTTTGGAGGAAGAAGCTG+CGG 0.609864 5_3:+9055473 None:intergenic
TTCGTATTATTACGGATGGG+AGG 0.610071 5_3:+9054239 None:intergenic
TTGTTCGTATTATTACGGAT+GGG 0.612923 5_3:+9054236 None:intergenic
GCGGTAGTTAACTACCGCCA+GGG 0.612961 5_3:-9055781 Msa0796980:five_prime_UTR
AAACCAGTTACAGACTGCAC+TGG 0.616430 5_3:-9055860 Msa0796980:five_prime_UTR
AAAGTTCATCATCTGATCGA+AGG 0.616481 5_3:+9049956 None:intergenic
GGTTAAAAGAGATGAAGAAG+AGG 0.617064 5_3:+9056383 None:intergenic
TTACCTTGTTCAGATTGTTG+CGG 0.618634 5_3:+9052192 None:intergenic
TATGGTAATAGGTTTCAGAA+TGG 0.620990 5_3:-9054101 Msa0796980:CDS
CTGTGATTAAGACAAAATTG+GGG 0.629784 5_3:-9051270 Msa0796980:CDS
AGTTCCAAACGGTTGAAAGG+TGG 0.634627 5_3:+9050119 None:intergenic
TCCACTTCCAGAACAATCAA+CGG 0.635239 5_3:-9056420 Msa0796980:five_prime_UTR
ATGGGAGTACACAAAAGGAA+TGG 0.640999 5_3:-9051975 Msa0796980:CDS
TCAGATCGAAAACTCACCAT+CGG 0.642537 5_3:+9056311 None:intergenic
AGAAGAAGAAGATGAAGCGG+CGG 0.645770 5_3:+9055503 None:intergenic
TAATGTAGACCTATGAAGCA+CGG 0.650846 5_3:+9055917 None:intergenic
CGTAATAATACGAACAACCC+GGG 0.655412 5_3:-9054230 Msa0796980:CDS
AGACAAAACGTTCATCGCGG+TGG 0.657013 5_3:+9054078 None:intergenic
GTTTGGAGGTAAGGAAGGAG+AGG 0.658872 5_3:-9049754 Msa0796980:three_prime_UTR
CGGTAGTTAACTACCGCCAG+GGG 0.665963 5_3:-9055780 Msa0796980:five_prime_UTR
TCATGCTAATAACTACCAGT+AGG 0.667363 5_3:-9056159 Msa0796980:five_prime_UTR
GAATACTTCCAATTGACACA+TGG 0.667588 5_3:+9055743 None:intergenic
CTGTATGTAACTGGTGTGAG+CGG 0.671173 5_3:-9055835 Msa0796980:five_prime_UTR
TCCCAATGTCAGACACGCGT+CGG 0.673789 5_3:+9055959 None:intergenic
GTCCTGGACCTTATCCTCAG+AGG 0.674041 5_3:-9054136 Msa0796980:CDS
TGTGATTAAGACAAAATTGG+GGG 0.674231 5_3:-9051269 Msa0796980:CDS
GGAAGCGGAGCTAGTAGCGG+CGG 0.676219 5_3:-9055426 Msa0796980:CDS
TTGATTGTTCTGGAAGTGGA+CGG 0.677273 5_3:+9056423 None:intergenic
ATACCAATTAAGTATTCACA+TGG 0.681226 5_3:-9056088 Msa0796980:five_prime_UTR
AGGCGTTGGATCCAAAGCGG+AGG 0.681284 5_3:-9056508 Msa0796980:five_prime_UTR
ACTACCGCTGGGAAACACGC+CGG 0.683116 5_3:+9055796 None:intergenic
ACTGGAAGCGGAGCTAGTAG+CGG 0.693673 5_3:-9055429 Msa0796980:CDS
AAAGTGATTTAGATCGCAGG+AGG 0.695618 5_3:-9051911 Msa0796980:intron
AGTATCGGAAGAGGAATCTG+CGG 0.697580 5_3:+9055449 None:intergenic
TGTTCTGGAAGTGGACGGTG+AGG 0.699786 5_3:+9056428 None:intergenic
GTACCGCAACAATCTGAACA+AGG 0.701773 5_3:-9052195 Msa0796980:intron
GCAGTTGAATTATCGTAACG+AGG 0.713525 5_3:-9051043 Msa0796980:intron
AGGAGGCGTTGGATCCAAAG+CGG 0.723390 5_3:-9056511 Msa0796980:five_prime_UTR
AATGACCATATTGCCCCTGG+CGG 0.724884 5_3:+9055767 None:intergenic
GCTGCCGGCGTGTTTCCCAG+CGG 0.730035 5_3:-9055800 Msa0796980:five_prime_UTR
GGAGTTAAAGACAAGTTACG+AGG 0.731121 5_3:-9051176 Msa0796980:intron
CAGAGACAAAACGTTCATCG+CGG 0.738071 5_3:+9054075 None:intergenic
ATAATGCCGATATTGTTAGG+CGG 0.739910 5_3:-9056112 Msa0796980:five_prime_UTR
GTAAACAAATGGATTTCACG+GGG 0.753145 5_3:-9055599 Msa0796980:five_prime_UTR
ACTTCCAGAACAATCAACGG+TGG 0.767945 5_3:-9056417 Msa0796980:five_prime_UTR
ATTATGTACAGAGAAAGAGG+AGG 0.785780 5_3:-9056528 Msa0796980:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATATTTTATTTTTGTC+AGG - chr5_3:9049809-9049828 Msa0796980:three_prime_UTR 10.0%
!!! AGTTTTTTTTATTTTTTTGA+TGG + chr5_3:9049899-9049918 None:intergenic 10.0%
!!! ATTTTTAAATGATAAACTAA+CGG - chr5_3:9051696-9051715 Msa0796980:intron 10.0%
!! ATCATCATTTAAAAAATTAA+TGG + chr5_3:9052088-9052107 None:intergenic 10.0%
!!! ATAAATAAAATACCTTTTTT+GGG + chr5_3:9054008-9054027 None:intergenic 10.0%
!! AATTTACTTGAAAAAAATTA+TGG + chr5_3:9054928-9054947 None:intergenic 10.0%
!!! ATAATTTTTTTCAAGTAAAT+TGG - chr5_3:9054927-9054946 Msa0796980:intron 10.0%
!! TTGAATTGTTTAAAAATTAA+GGG + chr5_3:9056533-9056552 None:intergenic 10.0%
!! ATTGAATTGTTTAAAAATTA+AGG + chr5_3:9056534-9056553 None:intergenic 10.0%
!!! ATTTTTAAACAATTCAATAT+AGG - chr5_3:9056536-9056555 Msa0796980:five_prime_UTR 10.0%
!! AGTAATTGAATAAAAATGAA+AGG + chr5_3:9050284-9050303 None:intergenic 15.0%
!! ATTAATAGTAATTTGAAAAC+AGG - chr5_3:9050650-9050669 Msa0796980:CDS 15.0%
!! TTAAAAGAAAAAACAAACAA+AGG - chr5_3:9050873-9050892 Msa0796980:CDS 15.0%
!! AATAATAATGAACAAAGATT+AGG + chr5_3:9051303-9051322 None:intergenic 15.0%
!!! TGTAGTTTTAGTAAATAAAT+AGG - chr5_3:9051393-9051412 Msa0796980:intron 15.0%
!! ATATAATAAAAAACTTAGCA+TGG - chr5_3:9052044-9052063 Msa0796980:intron 15.0%
!! TTTAAATGATGATAAATCAA+CGG - chr5_3:9052095-9052114 Msa0796980:intron 15.0%
!!! GATAAATAAAATACCTTTTT+TGG + chr5_3:9054009-9054028 None:intergenic 15.0%
!! GAAAAAAAAAGTTTAGAAAA+TGG + chr5_3:9056730-9056749 None:intergenic 15.0%
!! AGATACTAACATTATATCAA+TGG + chr5_3:9051338-9051357 None:intergenic 20.0%
!! TAAATAAATAGGTTGTGTTA+GGG - chr5_3:9051404-9051423 Msa0796980:intron 20.0%
!! TTATAATAAAAAAATCGTGC+TGG - chr5_3:9051629-9051648 Msa0796980:intron 20.0%
!!! AAAAAATCTATAAGCTTGTT+AGG - chr5_3:9051814-9051833 Msa0796980:intron 20.0%
!!! TTTTATCTACAAGGTAATTT+AGG - chr5_3:9051937-9051956 Msa0796980:CDS 20.0%
!!! AATTTTGTTTTATAATCCCA+CGG + chr5_3:9052012-9052031 None:intergenic 20.0%
!!! TTTCTTGATTCGTTTTTTTA+TGG - chr5_3:9052258-9052277 Msa0796980:intron 20.0%
!!! TTTGACTAGAGTATTAATTA+CGG - chr5_3:9052811-9052830 Msa0796980:intron 20.0%
!!! TTTGACTTGGATATTAATTA+GGG - chr5_3:9053104-9053123 Msa0796980:intron 20.0%
!!! TCTATAGTTTTAATATTTCG+TGG - chr5_3:9053465-9053484 Msa0796980:intron 20.0%
!!! CATGATTATTTTATGACATT+TGG - chr5_3:9053619-9053638 Msa0796980:intron 20.0%
!! ATGTCTTAAAATAATCATGA+AGG + chr5_3:9053667-9053686 None:intergenic 20.0%
!! TAAAAAGTCTCTAAATAAAC+AGG + chr5_3:9053926-9053945 None:intergenic 20.0%
!! TTTATCTATAAATAAACTGC+TGG - chr5_3:9054023-9054042 Msa0796980:CDS 20.0%
!! TTATCTATAAATAAACTGCT+GGG - chr5_3:9054024-9054043 Msa0796980:CDS 20.0%
!!! AAAAAATGAATGCTTTTATC+TGG + chr5_3:9054253-9054272 None:intergenic 20.0%
!! ATCAGAAATTAAATTACCAA+TGG + chr5_3:9054297-9054316 None:intergenic 20.0%
!!! ATTGGTAATTTAATTTCTGA+TGG - chr5_3:9054296-9054315 Msa0796980:intron 20.0%
!!! TAAAAGAAATTTTAGCACAT+GGG + chr5_3:9054509-9054528 None:intergenic 20.0%
!!! TCTTTCTTTTTTATTAGACT+TGG - chr5_3:9054675-9054694 Msa0796980:intron 20.0%
!!! TTTTTTTCAAGTAAATTGGT+TGG - chr5_3:9054931-9054950 Msa0796980:intron 20.0%
!! CTAAATCCAATACAAATATA+TGG + chr5_3:9055698-9055717 None:intergenic 20.0%
!! CATATATTTGTATTGGATTT+AGG - chr5_3:9055696-9055715 Msa0796980:five_prime_UTR 20.0%
!!! TAATATGCTTTAACTAGTTT+TGG - chr5_3:9055763-9055782 Msa0796980:five_prime_UTR 20.0%
!! AATCATCAATTAGCTAATTA+AGG - chr5_3:9056097-9056116 Msa0796980:five_prime_UTR 20.0%
!! TAATTGAATATCATCTTTAG+AGG - chr5_3:9056121-9056140 Msa0796980:five_prime_UTR 20.0%
!! GAAAACTATATAATCTGAAA+TGG - chr5_3:9056162-9056181 Msa0796980:five_prime_UTR 20.0%
!!! TCATTATCAACATAATTTGT+TGG - chr5_3:9056195-9056214 Msa0796980:five_prime_UTR 20.0%
!!! ATAACAAACTCTATTTTGAT+TGG + chr5_3:9056328-9056347 None:intergenic 20.0%
!!! AGAAATATGCAGTAATTTTA+TGG - chr5_3:9056666-9056685 Msa0796980:five_prime_UTR 20.0%
!!! TACATTTAGTGCTTTTGTTT+CGG + chr5_3:9049774-9049793 None:intergenic 25.0%
!! TTTTAACCGTTAAAGATCAT+AGG - chr5_3:9050180-9050199 Msa0796980:intron 25.0%
! TTTAACCGTTAAAGATCATA+GGG - chr5_3:9050181-9050200 Msa0796980:intron 25.0%
! ATACCAATTAAGTATTCACA+TGG - chr5_3:9050460-9050479 Msa0796980:intron 25.0%
! GTAAATAAATAGGTTGTGTT+AGG - chr5_3:9051403-9051422 Msa0796980:intron 25.0%
! ATCTTCCTATAGTAAAACTT+AGG + chr5_3:9051485-9051504 None:intergenic 25.0%
!! GATAAAATGAAGTACCATTA+TGG + chr5_3:9051924-9051943 None:intergenic 25.0%
! GGGATTATAAAACAAAATTG+CGG - chr5_3:9052013-9052032 Msa0796980:CDS 25.0%
! GGATTATAAAACAAAATTGC+GGG - chr5_3:9052014-9052033 Msa0796980:CDS 25.0%
! AAGAATTCGACAAATTGTTA+TGG - chr5_3:9052679-9052698 Msa0796980:intron 25.0%
! TTTCTTCATTATGTTGAAAC+TGG - chr5_3:9052733-9052752 Msa0796980:intron 25.0%
! GGGAAAGACTAAAATTATTA+GGG + chr5_3:9053016-9053035 None:intergenic 25.0%
! AGGGAAAGACTAAAATTATT+AGG + chr5_3:9053017-9053036 None:intergenic 25.0%
!!! TCATATGATTTTGTTTGACT+TGG - chr5_3:9053091-9053110 Msa0796980:intron 25.0%
!!! GTTTGACTTGGATATTAATT+AGG - chr5_3:9053103-9053122 Msa0796980:intron 25.0%
! TTCATATTGAGTTTGAATGT+TGG - chr5_3:9053370-9053389 Msa0796980:intron 25.0%
!!! GTTTTAATATTTCGTGGTTT+TGG - chr5_3:9053471-9053490 Msa0796980:intron 25.0%
!!! TATGACATTTGGTGTTATTA+TGG - chr5_3:9053630-9053649 Msa0796980:intron 25.0%
! ATAATCATGAAGGATGAAAA+AGG + chr5_3:9053657-9053676 None:intergenic 25.0%
! CTCTTAATATTATAAGCCAT+TGG - chr5_3:9054278-9054297 Msa0796980:intron 25.0%
!!! GTAAAAGAAATTTTAGCACA+TGG + chr5_3:9054510-9054529 None:intergenic 25.0%
! AAATACTTTCTTTGAGCAAT+AGG + chr5_3:9054816-9054835 None:intergenic 25.0%
!!! TATTGCTCAAAGAAAGTATT+TGG - chr5_3:9054815-9054834 Msa0796980:intron 25.0%
! ACTTGAAAAAAATTATGGCT+CGG + chr5_3:9054923-9054942 None:intergenic 25.0%
! AGGATACTAATGCAATAAAA+AGG - chr5_3:9054972-9054991 Msa0796980:intron 25.0%
! TTAACTGTTGGACAAATTAA+TGG - chr5_3:9055079-9055098 Msa0796980:intron 25.0%
! AAAAAGTGAAACCATAAAGT+GGG + chr5_3:9055112-9055131 None:intergenic 25.0%
! TAAAAAGTGAAACCATAAAG+TGG + chr5_3:9055113-9055132 None:intergenic 25.0%
!!! ATGGTTTCACTTTTTATGAT+TGG - chr5_3:9055117-9055136 Msa0796980:intron 25.0%
!!! TTTCACTTTTTATGATTGGT+TGG - chr5_3:9055121-9055140 Msa0796980:intron 25.0%
!! AGTCTTAAAGTATTTGTCTT+TGG - chr5_3:9055147-9055166 Msa0796980:intron 25.0%
! TTCTGTGATTAAGACAAAAT+TGG - chr5_3:9055276-9055295 Msa0796980:intron 25.0%
! TCTGTGATTAAGACAAAATT+GGG - chr5_3:9055277-9055296 Msa0796980:intron 25.0%
! TTCAAAAGGAAAACTAAATC+TGG + chr5_3:9055439-9055458 None:intergenic 25.0%
! CCAACATAAAACTATTCAAA+AGG + chr5_3:9055453-9055472 None:intergenic 25.0%
!!! CCTTTTGAATAGTTTTATGT+TGG - chr5_3:9055450-9055469 Msa0796980:CDS 25.0%
!! AAGTACGAATTTTCATTGTA+AGG + chr5_3:9055820-9055839 None:intergenic 25.0%
! TATTCTCTGTGTAATATCTT+TGG + chr5_3:9055931-9055950 None:intergenic 25.0%
! TACACAGAGAATAAAAATGA+AGG - chr5_3:9055938-9055957 Msa0796980:five_prime_UTR 25.0%
! ACACAGAGAATAAAAATGAA+GGG - chr5_3:9055939-9055958 Msa0796980:five_prime_UTR 25.0%
! TTCAAATTAACAGTGGAAAT+AGG + chr5_3:9056024-9056043 None:intergenic 25.0%
! AAAGCCAAAAAAAAAACAGA+TGG + chr5_3:9056305-9056324 None:intergenic 25.0%
! CAATAAACAAACATTAACAG+AGG + chr5_3:9056376-9056395 None:intergenic 25.0%
! CTCTGTTAATGTTTGTTTAT+TGG - chr5_3:9056374-9056393 Msa0796980:five_prime_UTR 25.0%
!! ACATTTAGTGCTTTTGTTTC+GGG + chr5_3:9049773-9049792 None:intergenic 30.0%
! TTTTGTCAGGAATAGAATAG+AGG - chr5_3:9049822-9049841 Msa0796980:three_prime_UTR 30.0%
!!! GATTTTGGTTGAAGAAGTTA+GGG + chr5_3:9049927-9049946 None:intergenic 30.0%
!!! TGATTTTGGTTGAAGAAGTT+AGG + chr5_3:9049928-9049947 None:intergenic 30.0%
! AACGATGATGAAGATGATTT+TGG + chr5_3:9049942-9049961 None:intergenic 30.0%
CAAAGAAGAAGAAGAGAATA+AGG - chr5_3:9049981-9050000 Msa0796980:three_prime_UTR 30.0%
TGTCCATGTGAATACTTAAT+TGG + chr5_3:9050466-9050485 None:intergenic 30.0%
ATTCCTACAACGATAAAGAT+GGG - chr5_3:9050991-9051010 Msa0796980:intron 30.0%
GAGAATAATTACCAGGAATA+GGG + chr5_3:9051281-9051300 None:intergenic 30.0%
AGATTAGGAGAATAATTACC+AGG + chr5_3:9051288-9051307 None:intergenic 30.0%
! TAGGTCCTAAGTTTTACTAT+AGG - chr5_3:9051477-9051496 Msa0796980:intron 30.0%
!!! CAACATGTATTTTAGAGTCA+AGG - chr5_3:9051536-9051555 Msa0796980:intron 30.0%
AATTGAAGACCTAACAGTAA+AGG - chr5_3:9051560-9051579 Msa0796980:intron 30.0%
ACTAGTAATCCTTTACTGTT+AGG + chr5_3:9051572-9051591 None:intergenic 30.0%
GATTACTAGTGTTTCCTTTA+TGG - chr5_3:9051582-9051601 Msa0796980:intron 30.0%
TAATAAAAAAATCGTGCTGG+CGG - chr5_3:9051632-9051651 Msa0796980:intron 30.0%
GTTGTAATGAAAAATTAGCG+TGG - chr5_3:9051654-9051673 Msa0796980:intron 30.0%
!! ACAAGTGTGCTCATTTTAAT+CGG - chr5_3:9051729-9051748 Msa0796980:intron 30.0%
! CCACTGTAATACATTTTGTT+TGG + chr5_3:9051887-9051906 None:intergenic 30.0%
CCAAACAAAATGTATTACAG+TGG - chr5_3:9051884-9051903 Msa0796980:intron 30.0%
TTGAATATCTTGTGCCATAA+TGG - chr5_3:9051907-9051926 Msa0796980:intron 30.0%
! GGTACTTCATTTTATCTACA+AGG - chr5_3:9051928-9051947 Msa0796980:CDS 30.0%
! AAGGTAATTTAGGACCTTAT+AGG - chr5_3:9051947-9051966 Msa0796980:CDS 30.0%
ACTGGTAATTGTTTCCTATA+AGG + chr5_3:9051964-9051983 None:intergenic 30.0%
AATTACCAGTGTTTCCTTTA+CGG - chr5_3:9051974-9051993 Msa0796980:CDS 30.0%
TTATAAAACAAAATTGCGGG+AGG - chr5_3:9052017-9052036 Msa0796980:CDS 30.0%
TATAAAACAAAATTGCGGGA+GGG - chr5_3:9052018-9052037 Msa0796980:intron 30.0%
TTGATCGGTTATTACAACTT+TGG - chr5_3:9052143-9052162 Msa0796980:intron 30.0%
!! GGTTATTACAACTTTGGAAT+AGG - chr5_3:9052149-9052168 Msa0796980:intron 30.0%
TTGTTCGTATTATTACGGAT+GGG + chr5_3:9052315-9052334 None:intergenic 30.0%
!! AGAATTTTGGGTATGGTAAT+AGG - chr5_3:9052436-9052455 Msa0796980:intron 30.0%
TATGGTAATAGGTTTCAGAA+TGG - chr5_3:9052447-9052466 Msa0796980:intron 30.0%
!! AAAGGTTATTGCTTTTCAAG+AGG - chr5_3:9052533-9052552 Msa0796980:intron 30.0%
!! TTATTGCTTTTCAAGAGGTA+TGG - chr5_3:9052538-9052557 Msa0796980:intron 30.0%
!! TATTGCTTTTCAAGAGGTAT+GGG - chr5_3:9052539-9052558 Msa0796980:intron 30.0%
AGCTTAAAAACACAAAGAAG+TGG + chr5_3:9052911-9052930 None:intergenic 30.0%
GATGGAAAGGCTAAAATATT+AGG + chr5_3:9053307-9053326 None:intergenic 30.0%
! GAGCTTTTATTATATGTGCA+TGG - chr5_3:9053441-9053460 Msa0796980:intron 30.0%
! TATACTGCTTTAGCGTTTTA+GGG - chr5_3:9053534-9053553 Msa0796980:intron 30.0%
GATACATACATTCCCAAAAA+AGG - chr5_3:9053993-9054012 Msa0796980:intron 30.0%
!! TTTTAGGTATTAGCAGCAAA+AGG + chr5_3:9054135-9054154 None:intergenic 30.0%
CTAATACCTAAAACAGACTT+AGG - chr5_3:9054142-9054161 Msa0796980:CDS 30.0%
!!! CAAAATGGATGTTTTGAAGA+TGG + chr5_3:9054216-9054235 None:intergenic 30.0%
! TCTTCAAAACATCCATTTTG+TGG - chr5_3:9054216-9054235 Msa0796980:CDS 30.0%
! TTTGAAATGTGTTTGCTCTT+AGG - chr5_3:9054389-9054408 Msa0796980:intron 30.0%
ACAGCTGAATTAAACTGAAA+TGG + chr5_3:9054474-9054493 None:intergenic 30.0%
! TGCCATTTACATGATTTACA+TGG + chr5_3:9054701-9054720 None:intergenic 30.0%
GTAAATCATGTAAATGGCAA+TGG - chr5_3:9054702-9054721 Msa0796980:intron 30.0%
TCATGAATCAGGATACAATA+TGG - chr5_3:9054726-9054745 Msa0796980:intron 30.0%
CATGAATCAGGATACAATAT+GGG - chr5_3:9054727-9054746 Msa0796980:intron 30.0%
AATGTAACCAATACAACAAC+AGG - chr5_3:9054772-9054791 Msa0796980:intron 30.0%
AAATTGGTTGGAGAAGATAT+TGG - chr5_3:9054943-9054962 Msa0796980:intron 30.0%
! AGGATGTGTGATTTTGTAAA+TGG - chr5_3:9054992-9055011 Msa0796980:intron 30.0%
! ATGTGTGATTTTGTAAATGG+AGG - chr5_3:9054995-9055014 Msa0796980:intron 30.0%
! TAATTTGTCCAACAGTTAAG+TGG + chr5_3:9055078-9055097 None:intergenic 30.0%
! ATGGAATTTTTCCCACTTTA+TGG - chr5_3:9055098-9055117 Msa0796980:intron 30.0%
TTTGGCAATTAGATGTTATC+TGG - chr5_3:9055165-9055184 Msa0796980:intron 30.0%
TTGGCAATTAGATGTTATCT+GGG - chr5_3:9055166-9055185 Msa0796980:intron 30.0%
CACAGAACAAAATTCAACAT+TGG + chr5_3:9055263-9055282 None:intergenic 30.0%
CTGTGATTAAGACAAAATTG+GGG - chr5_3:9055278-9055297 Msa0796980:intron 30.0%
TGTGATTAAGACAAAATTGG+GGG - chr5_3:9055279-9055298 Msa0796980:intron 30.0%
! TGATGGAAAGAGATTTTATG+TGG - chr5_3:9055351-9055370 Msa0796980:CDS 30.0%
! ACAGAAACTGCTAAAGTTTT+GGG - chr5_3:9055541-9055560 Msa0796980:CDS 30.0%
ACAATGAAAATTCGTACTTC+TGG - chr5_3:9055821-9055840 Msa0796980:five_prime_UTR 30.0%
! TTTAACTTCTGTGAAGTGTA+TGG - chr5_3:9055978-9055997 Msa0796980:five_prime_UTR 30.0%
CTGCAATTTCAAATTAACAG+TGG + chr5_3:9056031-9056050 None:intergenic 30.0%
!! TATCAACATAATTTGTTGGC+AGG - chr5_3:9056199-9056218 Msa0796980:five_prime_UTR 30.0%
!! ATCAACATAATTTGTTGGCA+GGG - chr5_3:9056200-9056219 Msa0796980:five_prime_UTR 30.0%
!!! GACACCATCTGTTTTTTTTT+TGG - chr5_3:9056298-9056317 Msa0796980:five_prime_UTR 30.0%
AAAATTAAGGGCAACTGTTA+AGG + chr5_3:9056521-9056540 None:intergenic 30.0%
ACAATTCAATATAGGAAGCA+AGG - chr5_3:9056544-9056563 Msa0796980:five_prime_UTR 30.0%
CAATTCAATATAGGAAGCAA+GGG - chr5_3:9056545-9056564 Msa0796980:five_prime_UTR 30.0%
CTGCATAAACGTGTTTATTA+AGG - chr5_3:9056759-9056778 Msa0796980:five_prime_UTR 30.0%
GTGATTATGTACAGAGAAAG+AGG - chr5_3:9050017-9050036 Msa0796980:three_prime_UTR 35.0%
ATTATGTACAGAGAAAGAGG+AGG - chr5_3:9050020-9050039 Msa0796980:three_prime_UTR 35.0%
GGTTAAAAGAGATGAAGAAG+AGG + chr5_3:9050168-9050187 None:intergenic 35.0%
TCATGCTAATAACTACCAGT+AGG - chr5_3:9050389-9050408 Msa0796980:intron 35.0%
CCTAACAATATCGGCATTAT+TGG + chr5_3:9050436-9050455 None:intergenic 35.0%
CCAATAATGCCGATATTGTT+AGG - chr5_3:9050433-9050452 Msa0796980:intron 35.0%
ATAATGCCGATATTGTTAGG+CGG - chr5_3:9050436-9050455 Msa0796980:intron 35.0%
TAATGTAGACCTATGAAGCA+CGG + chr5_3:9050634-9050653 None:intergenic 35.0%
GAATACTTCCAATTGACACA+TGG + chr5_3:9050808-9050827 None:intergenic 35.0%
CATAAGAGACCGTAAACAAA+TGG - chr5_3:9050938-9050957 Msa0796980:intron 35.0%
CCGTGAAATCCATTTGTTTA+CGG + chr5_3:9050950-9050969 None:intergenic 35.0%
! CCGTAAACAAATGGATTTCA+CGG - chr5_3:9050947-9050966 Msa0796980:intron 35.0%
! CGTAAACAAATGGATTTCAC+GGG - chr5_3:9050948-9050967 Msa0796980:intron 35.0%
! GTAAACAAATGGATTTCACG+GGG - chr5_3:9050949-9050968 Msa0796980:intron 35.0%
GATTCCTACAACGATAAAGA+TGG - chr5_3:9050990-9051009 Msa0796980:intron 35.0%
TGAAGAAGAAGAAGATGAAG+CGG + chr5_3:9051051-9051070 None:intergenic 35.0%
! GAAGAAAATGGTGATGTTGT+TGG - chr5_3:9051158-9051177 Msa0796980:intron 35.0%
CATGATGATAGAGATCTGTT+TGG - chr5_3:9051210-9051229 Msa0796980:CDS 35.0%
TAATTACCAGGAATAGGGTA+AGG + chr5_3:9051276-9051295 None:intergenic 35.0%
GGAGAATAATTACCAGGAAT+AGG + chr5_3:9051282-9051301 None:intergenic 35.0%
! AAATAACCCATGAGCTTGTT+AGG - chr5_3:9051458-9051477 Msa0796980:intron 35.0%
GTGTTTCCTTTATGGTTAAC+TGG - chr5_3:9051590-9051609 Msa0796980:intron 35.0%
AGCTAACCAGTTAACCATAA+AGG + chr5_3:9051599-9051618 None:intergenic 35.0%
AATGATAAACTAACGGCTGA+AGG - chr5_3:9051703-9051722 Msa0796980:intron 35.0%
!! CAAGTGTGCTCATTTTAATC+GGG - chr5_3:9051730-9051749 Msa0796980:intron 35.0%
!! AAGCTTTGAGTATACGAAGA+TGG - chr5_3:9051841-9051860 Msa0796980:intron 35.0%
ATTAACCGTAAAGGAAACAC+TGG + chr5_3:9051982-9052001 None:intergenic 35.0%
GTGTTTCCTTTACGGTTAAT+TGG - chr5_3:9051982-9052001 Msa0796980:CDS 35.0%
GGTTAACCAATTAACCGTAA+AGG + chr5_3:9051991-9052010 None:intergenic 35.0%
GTTGTTCGTATTATTACGGA+TGG + chr5_3:9052316-9052335 None:intergenic 35.0%
TGAAGAAACTCTGTCAAGAA+AGG - chr5_3:9052515-9052534 Msa0796980:intron 35.0%
TTGCGTCATGCAATTTAAGT+AGG - chr5_3:9052591-9052610 Msa0796980:CDS 35.0%
TGCGTCATGCAATTTAAGTA+GGG - chr5_3:9052592-9052611 Msa0796980:CDS 35.0%
AGCCAAACAGTATACAATAG+TGG - chr5_3:9052945-9052964 Msa0796980:intron 35.0%
TGCCACTATTGTATACTGTT+TGG + chr5_3:9052950-9052969 None:intergenic 35.0%
TCAAAAGTCCAAACAACAGA+GGG + chr5_3:9053036-9053055 None:intergenic 35.0%
TACTCAAACACGCAAAGAAA+CGG + chr5_3:9053204-9053223 None:intergenic 35.0%
! GATGCTATTTGTCTACTGTT+TGG + chr5_3:9053240-9053259 None:intergenic 35.0%
!! ACACTATCGAGATTTTAGGA+TGG + chr5_3:9053284-9053303 None:intergenic 35.0%
! TAGGACACTATCGAGATTTT+AGG + chr5_3:9053288-9053307 None:intergenic 35.0%
CAAAAAGTTCAAACGACAGA+TGG + chr5_3:9053325-9053344 None:intergenic 35.0%
! CTATACTGCTTTAGCGTTTT+AGG - chr5_3:9053533-9053552 Msa0796980:intron 35.0%
!!! GTATTTTGATGATCGTAGCT+TGG - chr5_3:9053798-9053817 Msa0796980:intron 35.0%
CTCCAATATCTTCAGTGATA+TGG + chr5_3:9053953-9053972 None:intergenic 35.0%
GTATTAGCAGCAAAAGGAAA+AGG + chr5_3:9054129-9054148 None:intergenic 35.0%
! CAAAACATCCATTTTGTGGT+AGG - chr5_3:9054220-9054239 Msa0796980:CDS 35.0%
GTTGATTACCTACCACAAAA+TGG + chr5_3:9054231-9054250 None:intergenic 35.0%
TTACCTTGTTCAGATTGTTG+CGG + chr5_3:9054359-9054378 None:intergenic 35.0%
TGAGTTTAGTAGTGTAGTGA+TGG - chr5_3:9054448-9054467 Msa0796980:intron 35.0%
!! TTTTACGCAGATACTTGCTA+CGG - chr5_3:9054524-9054543 Msa0796980:intron 35.0%
AAATCACTTTGTGGTCTTTC+TGG + chr5_3:9054627-9054646 None:intergenic 35.0%
GGCCATGTAAATCATGTAAA+TGG - chr5_3:9054696-9054715 Msa0796980:intron 35.0%
TTTGGTATCAAGCTGATTGT+AGG - chr5_3:9054833-9054852 Msa0796980:intron 35.0%
TTGGTATCAAGCTGATTGTA+GGG - chr5_3:9054834-9054853 Msa0796980:intron 35.0%
ATAGTCTCTTTACCTAGTCA+TGG - chr5_3:9054874-9054893 Msa0796980:intron 35.0%
GGAGAAGATATTGGCAATAT+AGG - chr5_3:9054952-9054971 Msa0796980:intron 35.0%
TACTTCTTCCACTTAACTGT+TGG - chr5_3:9055067-9055086 Msa0796980:intron 35.0%
TTGGCATCAACATCATGTAT+CGG + chr5_3:9055244-9055263 None:intergenic 35.0%
! GACAGAAACTGCTAAAGTTT+TGG - chr5_3:9055540-9055559 Msa0796980:CDS 35.0%
! AGGAGCTTATGGTAATGAAA+AGG + chr5_3:9055601-9055620 None:intergenic 35.0%
TCATGACATGCAAGTGAAAA+AGG + chr5_3:9055621-9055640 None:intergenic 35.0%
TGCATGTCATGATTTCAACA+AGG - chr5_3:9055629-9055648 Msa0796980:five_prime_UTR 35.0%
GGCGTTCCATATATTTGTAT+TGG - chr5_3:9055689-9055708 Msa0796980:five_prime_UTR 35.0%
GAATAAAAATGAAGGGCTAC+TGG - chr5_3:9055946-9055965 Msa0796980:five_prime_UTR 35.0%
TGGAAATAGGAAACCAATAC+AGG + chr5_3:9056011-9056030 None:intergenic 35.0%
AAAGTGAAATTGTTCGGTCT+CGG + chr5_3:9056351-9056370 None:intergenic 35.0%
GAGGCAAAAGTGAAATTGTT+CGG + chr5_3:9056357-9056376 None:intergenic 35.0%
!! AGGTGACTTGTTATTACATC+TGG + chr5_3:9056474-9056493 None:intergenic 35.0%
AGATGTAATAACAAGTCACC+TGG - chr5_3:9056473-9056492 Msa0796980:five_prime_UTR 35.0%
AAAGTTCATCATCTGATCGA+AGG + chr5_3:9056595-9056614 None:intergenic 35.0%
! TCGATCAGATGATGAACTTT+TGG - chr5_3:9056595-9056614 Msa0796980:five_prime_UTR 35.0%
! CGATCAGATGATGAACTTTT+GGG - chr5_3:9056596-9056615 Msa0796980:five_prime_UTR 35.0%
TGTCAGGAATAGAATAGAGG+TGG - chr5_3:9049825-9049844 Msa0796980:three_prime_UTR 40.0%
!! GTTGATTCGTTTCCGATCAA+CGG + chr5_3:9050072-9050091 None:intergenic 40.0%
!! TTGATTGTTCTGGAAGTGGA+CGG + chr5_3:9050128-9050147 None:intergenic 40.0%
TCCACTTCCAGAACAATCAA+CGG - chr5_3:9050128-9050147 Msa0796980:CDS 40.0%
! TTTACCACCGTTGATTGTTC+TGG + chr5_3:9050138-9050157 None:intergenic 40.0%
CAATCAACGGTGGTAAAGAT+AGG - chr5_3:9050141-9050160 Msa0796980:CDS 40.0%
AGGGTCCCTATGATCTTTAA+CGG + chr5_3:9050189-9050208 None:intergenic 40.0%
!! AGCATTTTTGGAGAGAGTGT+TGG + chr5_3:9050216-9050235 None:intergenic 40.0%
TCAGATCGAAAACTCACCAT+CGG + chr5_3:9050240-9050259 None:intergenic 40.0%
AACTACCAGTAGGTAGTTGT+AGG - chr5_3:9050399-9050418 Msa0796980:intron 40.0%
GGTATACCGCCTAACAATAT+CGG + chr5_3:9050445-9050464 None:intergenic 40.0%
GAAAATGACGTAATCCAGTC+TGG - chr5_3:9050544-9050563 Msa0796980:intron 40.0%
ACTGACAATTGTATCCAGAC+TGG + chr5_3:9050561-9050580 None:intergenic 40.0%
CTGGATACAATTGTCAGTGT+CGG - chr5_3:9050563-9050582 Msa0796980:intron 40.0%
TATGAAGCACGGACATTCAT+CGG + chr5_3:9050623-9050642 None:intergenic 40.0%
TGAAAACAGGACACATTTCC+TGG - chr5_3:9050663-9050682 Msa0796980:CDS 40.0%
!!! AGTCTGTAACTGGTTTTTCC+AGG + chr5_3:9050684-9050703 None:intergenic 40.0%
GGTCATTTCCATGTGTCAAT+TGG - chr5_3:9050797-9050816 Msa0796980:intron 40.0%
AGAAGACGAAGAAGAAGAGT+GGG + chr5_3:9051018-9051037 None:intergenic 40.0%
AAGAAGACGAAGAAGAAGAG+TGG + chr5_3:9051019-9051038 None:intergenic 40.0%
! AGGGTAAGGACTTTTAGCAA+GGG + chr5_3:9051262-9051281 None:intergenic 40.0%
! TAGGGTAAGGACTTTTAGCA+AGG + chr5_3:9051263-9051282 None:intergenic 40.0%
AAAAGTCCTTACCCTATTCC+TGG - chr5_3:9051267-9051286 Msa0796980:CDS 40.0%
TTAGGACCTAACAAGCTCAT+GGG + chr5_3:9051467-9051486 None:intergenic 40.0%
! ATGGTTAACTGGTTAGCTGT+TGG - chr5_3:9051601-9051620 Msa0796980:intron 40.0%
! TTAACTGGTTAGCTGTTGGA+TGG - chr5_3:9051605-9051624 Msa0796980:intron 40.0%
! TAACTGGTTAGCTGTTGGAT+GGG - chr5_3:9051606-9051625 Msa0796980:intron 40.0%
TACGGTTAATTGGTTAACCG+TGG - chr5_3:9051992-9052011 Msa0796980:CDS 40.0%
ACGGTTAATTGGTTAACCGT+GGG - chr5_3:9051993-9052012 Msa0796980:CDS 40.0%
TCACTAATCGACAAACACCA+AGG + chr5_3:9052188-9052207 None:intergenic 40.0%
! TGGCAAGATGTGATTTTCTC+TGG - chr5_3:9052278-9052297 Msa0796980:intron 40.0%
TTCGTATTATTACGGATGGG+AGG + chr5_3:9052312-9052331 None:intergenic 40.0%
CCGGGTTGTTCGTATTATTA+CGG + chr5_3:9052320-9052339 None:intergenic 40.0%
CCGTAATAATACGAACAACC+CGG - chr5_3:9052317-9052336 Msa0796980:intron 40.0%
CGTAATAATACGAACAACCC+GGG - chr5_3:9052318-9052337 Msa0796980:intron 40.0%
! AAATTCTGCCTCTGAGGATA+AGG + chr5_3:9052423-9052442 None:intergenic 40.0%
! TATCCTCAGAGGCAGAATTT+TGG - chr5_3:9052423-9052442 Msa0796980:intron 40.0%
! ATCCTCAGAGGCAGAATTTT+GGG - chr5_3:9052424-9052443 Msa0796980:intron 40.0%
GCGTCATGCAATTTAAGTAG+GGG - chr5_3:9052593-9052612 Msa0796980:CDS 40.0%
CGTCATGCAATTTAAGTAGG+GGG - chr5_3:9052594-9052613 Msa0796980:CDS 40.0%
TCATTATGTTGAAACTGGCG+AGG - chr5_3:9052738-9052757 Msa0796980:intron 40.0%
AAACTGGCGAGGAAATCAAA+AGG - chr5_3:9052749-9052768 Msa0796980:intron 40.0%
TTGTAGTCAATAGCAGCCAT+AGG - chr5_3:9052836-9052855 Msa0796980:intron 40.0%
TAGTCTTTCCCTCTGTTGTT+TGG - chr5_3:9053025-9053044 Msa0796980:intron 40.0%
GTCAAAAGTCCAAACAACAG+AGG + chr5_3:9053037-9053056 None:intergenic 40.0%
CAAAGAAACGGTGTTTCATG+TGG + chr5_3:9053192-9053211 None:intergenic 40.0%
TAGGATGGCTTCGTTTATTG+CGG + chr5_3:9053269-9053288 None:intergenic 40.0%
AGTTCAAACGACAGATGGAA+AGG + chr5_3:9053320-9053339 None:intergenic 40.0%
CAGTATAGCGAATAGTCGTA+TGG + chr5_3:9053521-9053540 None:intergenic 40.0%
TAGCTTGGTAAGCGCTATTT+GGG - chr5_3:9053813-9053832 Msa0796980:intron 40.0%
CGCCATATCACTGAAGATAT+TGG - chr5_3:9053948-9053967 Msa0796980:intron 40.0%
!! ATTGGAGCTGATTTGAACGA+AGG - chr5_3:9053966-9053985 Msa0796980:intron 40.0%
! TCTGAGCCTAAGTCTGTTTT+AGG + chr5_3:9054151-9054170 None:intergenic 40.0%
AAAACAGACTTAGGCTCAGA+AGG - chr5_3:9054151-9054170 Msa0796980:CDS 40.0%
TTATATTCGCCATGAGCCTT+GGG - chr5_3:9054548-9054567 Msa0796980:intron 40.0%
! ATGGGAGTACACAAAAGGAA+TGG - chr5_3:9054573-9054592 Msa0796980:intron 40.0%
CTGCGATCTAAATCACTTTG+TGG + chr5_3:9054636-9054655 None:intergenic 40.0%
CACAAAGTGATTTAGATCGC+AGG - chr5_3:9054634-9054653 Msa0796980:intron 40.0%
AAAGTGATTTAGATCGCAGG+AGG - chr5_3:9054637-9054656 Msa0796980:intron 40.0%
ATGGCAATGGATCATGAATC+AGG - chr5_3:9054715-9054734 Msa0796980:intron 40.0%
ACAGCTACCTGTTGTTGTAT+TGG + chr5_3:9054782-9054801 None:intergenic 40.0%
TACAACAACAGGTAGCTGTT+AGG - chr5_3:9054783-9054802 Msa0796980:intron 40.0%
ACAACAACAGGTAGCTGTTA+GGG - chr5_3:9054784-9054803 Msa0796980:intron 40.0%
TCTCTTTACCTAGTCATGGT+TGG - chr5_3:9054878-9054897 Msa0796980:intron 40.0%
GGAGTTAAAGACAAGTTACG+AGG - chr5_3:9055372-9055391 Msa0796980:CDS 40.0%
GCAGTTGAATTATCGTAACG+AGG - chr5_3:9055505-9055524 Msa0796980:CDS 40.0%
GCAAGTGAAAAAGGAGCTTA+TGG + chr5_3:9055612-9055631 None:intergenic 40.0%
GAATCTGCAAGCAAGAATAG+AGG + chr5_3:9055655-9055674 None:intergenic 40.0%
ATCTGTTTCAGCTTACTCTC+TGG - chr5_3:9055790-9055809 Msa0796980:five_prime_UTR 40.0%
GCGTTTATAACAACACGTCT+TGG - chr5_3:9055853-9055872 Msa0796980:five_prime_UTR 40.0%
AACTTCTGTGAAGTGTATGG+TGG - chr5_3:9055981-9056000 Msa0796980:five_prime_UTR 40.0%
AAATTGCAGTAATCACCCAG+CGG - chr5_3:9056042-9056061 Msa0796980:five_prime_UTR 40.0%
!! AACATAATTTGTTGGCAGGG+TGG - chr5_3:9056203-9056222 Msa0796980:five_prime_UTR 40.0%
! TTGCGAATGAGGTATTATGC+TGG - chr5_3:9056240-9056259 Msa0796980:five_prime_UTR 40.0%
!! GAGGTATTATGCTGGCTTTA+TGG - chr5_3:9056248-9056267 Msa0796980:five_prime_UTR 40.0%
AGAAGTTCCAAACGGTTGAA+AGG + chr5_3:9056435-9056454 None:intergenic 40.0%
! CAATTTTTCACAACAGCTCC+AGG + chr5_3:9056494-9056513 None:intergenic 40.0%
!! TAAGGCTTTGTTTGCGTGTT+TGG - chr5_3:9056777-9056796 Msa0796980:five_prime_UTR 40.0%
GGAGAGGACTTAAGGAAAAA+AGG - chr5_3:9056810-9056829 Msa0796980:five_prime_UTR 40.0%
!! ACCGTTGATTGTTCTGGAAG+TGG + chr5_3:9050132-9050151 None:intergenic 45.0%
ACTTCCAGAACAATCAACGG+TGG - chr5_3:9050131-9050150 Msa0796980:CDS 45.0%
CTCTCCAAAAATGCTTCCGA+TGG - chr5_3:9050221-9050240 Msa0796980:intron 45.0%
!!! CTCACCATCGGAAGCATTTT+TGG + chr5_3:9050228-9050247 None:intergenic 45.0%
TAAGGCCTACAACTACCTAC+TGG + chr5_3:9050407-9050426 None:intergenic 45.0%
! CGGCATTATTGGTTGAGCTA+AGG + chr5_3:9050425-9050444 None:intergenic 45.0%
GATGAATGTCCGTGCTTCAT+AGG - chr5_3:9050622-9050641 Msa0796980:CDS 45.0%
AAACCAGTTACAGACTGCAC+TGG - chr5_3:9050688-9050707 Msa0796980:intron 45.0%
!! GCACTGGTTCTGTATGTAAC+TGG - chr5_3:9050704-9050723 Msa0796980:intron 45.0%
CTGTATGTAACTGGTGTGAG+CGG - chr5_3:9050713-9050732 Msa0796980:intron 45.0%
! ACAAATGGATTTCACGGGGA+AGG - chr5_3:9050953-9050972 Msa0796980:intron 45.0%
TGTAGGAATCTTCGCCGAAA+AGG + chr5_3:9050980-9050999 None:intergenic 45.0%
GGTCCCATCTTTATCGTTGT+AGG + chr5_3:9050997-9051016 None:intergenic 45.0%
AGAAGAAGAAGATGAAGCGG+CGG + chr5_3:9051048-9051067 None:intergenic 45.0%
! AGTATCGGAAGAGGAATCTG+CGG + chr5_3:9051102-9051121 None:intergenic 45.0%
! GGCGGTGATGATGAAGAAAA+TGG - chr5_3:9051146-9051165 Msa0796980:intron 45.0%
CTTAGGACCTAACAAGCTCA+TGG + chr5_3:9051468-9051487 None:intergenic 45.0%
AATCGGGTTACACTTTCGAC+CGG - chr5_3:9051746-9051765 Msa0796980:intron 45.0%
CGAAGATGGAAGACTATGTC+TGG - chr5_3:9051855-9051874 Msa0796980:intron 45.0%
AAAACAAAATTGCGGGAGGG+TGG - chr5_3:9052021-9052040 Msa0796980:intron 45.0%
!! CCTAGGGTGCTCTTTTTGAT+CGG - chr5_3:9052128-9052147 Msa0796980:intron 45.0%
TAATCGACAAACACCAAGGC+AGG + chr5_3:9052184-9052203 None:intergenic 45.0%
CAAGGGCAGCATAATGATAG+AGG - chr5_3:9052372-9052391 Msa0796980:CDS 45.0%
CAGCATAATGATAGAGGAGC+TGG - chr5_3:9052378-9052397 Msa0796980:CDS 45.0%
TACCCAAAATTCTGCCTCTG+AGG + chr5_3:9052429-9052448 None:intergenic 45.0%
!! CAGAGGCAGAATTTTGGGTA+TGG - chr5_3:9052429-9052448 Msa0796980:intron 45.0%
CAGAGACAAAACGTTCATCG+CGG + chr5_3:9052476-9052495 None:intergenic 45.0%
AGCAGCTATAGCAATGCCTA+TGG + chr5_3:9052855-9052874 None:intergenic 45.0%
! AGCCATATGTGTCGCTATAG+TGG - chr5_3:9053143-9053162 Msa0796980:intron 45.0%
AGCCACTATAGCGACACATA+TGG + chr5_3:9053148-9053167 None:intergenic 45.0%
CTATAGCAGGCAAGTTCACA+AGG + chr5_3:9053757-9053776 None:intergenic 45.0%
GTAGCTTGGTAAGCGCTATT+TGG - chr5_3:9053812-9053831 Msa0796980:intron 45.0%
GACTTAGGCTCAGAAGGTTA+TGG - chr5_3:9054157-9054176 Msa0796980:CDS 45.0%
GTACCGCAACAATCTGAACA+AGG - chr5_3:9054353-9054372 Msa0796980:intron 45.0%
CTTATATTCGCCATGAGCCT+TGG - chr5_3:9054547-9054566 Msa0796980:intron 45.0%
TTGTGTACTCCCATTTCCCA+AGG + chr5_3:9054567-9054586 None:intergenic 45.0%
! GGGAAATGGGAGTACACAAA+AGG - chr5_3:9054568-9054587 Msa0796980:intron 45.0%
CAACAACAGGTAGCTGTTAG+GGG - chr5_3:9054785-9054804 Msa0796980:intron 45.0%
GACACTATCCAACCATGACT+AGG + chr5_3:9054889-9054908 None:intergenic 45.0%
TCTCAGCACCCATCAAGATA+CGG + chr5_3:9055309-9055328 None:intergenic 45.0%
!! TATCTTGATGGGTGCTGAGA+TGG - chr5_3:9055309-9055328 Msa0796980:CDS 45.0%
TGCTGTGATACGACTACTGA+TGG - chr5_3:9055334-9055353 Msa0796980:CDS 45.0%
CTTGCAGATTCAGTCATTCC+TGG - chr5_3:9055664-9055683 Msa0796980:five_prime_UTR 45.0%
AAATATATGGAACGCCTGCC+AGG + chr5_3:9055685-9055704 None:intergenic 45.0%
CAGCACAAGATCACAGATTG+CGG + chr5_3:9055738-9055757 None:intergenic 45.0%
ATGATGCAGGCCATCTTGTT+CGG - chr5_3:9055889-9055908 Msa0796980:five_prime_UTR 45.0%
GCATTTCAGTCCGAACAAGA+TGG + chr5_3:9055902-9055921 None:intergenic 45.0%
AAAAATGAAGGGCTACTGGC+AGG - chr5_3:9055950-9055969 Msa0796980:five_prime_UTR 45.0%
GTATGGTGGCAAACCTGTAT+TGG - chr5_3:9055995-9056014 Msa0796980:five_prime_UTR 45.0%
AGTTCCAAACGGTTGAAAGG+TGG + chr5_3:9056432-9056451 None:intergenic 45.0%
GAGCTTGCAGAAGTTCCAAA+CGG + chr5_3:9056443-9056462 None:intergenic 45.0%
!! ATCATCTGATCGAAGGTGCT+GGG + chr5_3:9056588-9056607 None:intergenic 45.0%
TGTTTGCGTGTTTGGAGGTA+AGG - chr5_3:9056785-9056804 Msa0796980:five_prime_UTR 45.0%
GTAAGGAAGGAGAGGACTTA+AGG - chr5_3:9056802-9056821 Msa0796980:five_prime_UTR 45.0%
!!! ATTTTTATTTTAAGAAATTT+CGG + chr5_3:9049744-9049763 None:intergenic 5.0%
!! AAATTGTTAAATAAAAATAT+AGG + chr5_3:9055574-9055593 None:intergenic 5.0%
! TACAGAGAAAGAGGAGGCGT+TGG - chr5_3:9050026-9050045 Msa0796980:three_prime_UTR 50.0%
GCACGGACATTCATCGGATT+AGG + chr5_3:9050617-9050636 None:intergenic 50.0%
GAACCAGTGCAGTCTGTAAC+TGG + chr5_3:9050694-9050713 None:intergenic 50.0%
AATGACCATATTGCCCCTGG+CGG + chr5_3:9050784-9050803 None:intergenic 50.0%
GGAAATGACCATATTGCCCC+TGG + chr5_3:9050787-9050806 None:intergenic 50.0%
! TTCACGGGGAAGGACCTTTT+CGG - chr5_3:9050963-9050982 Msa0796980:intron 50.0%
! ACCTTTGGAGGAAGAAGCTG+CGG + chr5_3:9051078-9051097 None:intergenic 50.0%
AGAGGAATCTGCGGAACCTT+TGG + chr5_3:9051093-9051112 None:intergenic 50.0%
GCAGATTCCTCTTCCGATAC+TGG - chr5_3:9051101-9051120 Msa0796980:intron 50.0%
TCCTCTTCCGATACTGGAAG+CGG - chr5_3:9051107-9051126 Msa0796980:intron 50.0%
ACTAGCTCCGCTTCCAGTAT+CGG + chr5_3:9051117-9051136 None:intergenic 50.0%
ATCGGGTTACACTTTCGACC+GGG - chr5_3:9051747-9051766 Msa0796980:intron 50.0%
AAACACCAAAGCACGAGCCT+AGG + chr5_3:9051774-9051793 None:intergenic 50.0%
TCAACGGTCGAGAGATTCCT+AGG - chr5_3:9052111-9052130 Msa0796980:intron 50.0%
CAACGGTCGAGAGATTCCTA+GGG - chr5_3:9052112-9052131 Msa0796980:intron 50.0%
!! CCGATCAAAAAGAGCACCCT+AGG + chr5_3:9052131-9052150 None:intergenic 50.0%
AATACGAACAACCCGGGAAG+AGG - chr5_3:9052324-9052343 Msa0796980:intron 50.0%
ATACGAACAACCCGGGAAGA+GGG - chr5_3:9052325-9052344 Msa0796980:intron 50.0%
AGACAAAACGTTCATCGCGG+TGG + chr5_3:9052473-9052492 None:intergenic 50.0%
GATTATCGTGTAGCGCCTAG+AGG + chr5_3:9052889-9052908 None:intergenic 50.0%
! TTGGCCTTCCCATACTTCCA+TGG - chr5_3:9053490-9053509 Msa0796980:intron 50.0%
! CACTCCATGGAAGTATGGGA+AGG + chr5_3:9053497-9053516 None:intergenic 50.0%
CTTCCCATACTTCCATGGAG+TGG - chr5_3:9053495-9053514 Msa0796980:intron 50.0%
! TGGCCACTCCATGGAAGTAT+GGG + chr5_3:9053501-9053520 None:intergenic 50.0%
ATGGCCACTCCATGGAAGTA+TGG + chr5_3:9053502-9053521 None:intergenic 50.0%
ATAGTCGTATGGCCACTCCA+TGG + chr5_3:9053510-9053529 None:intergenic 50.0%
! TGGTGGATAGCAGAGCAAAG+TGG + chr5_3:9053564-9053583 None:intergenic 50.0%
! CTATCCACCATTGACTGCGT+AGG - chr5_3:9053574-9053593 Msa0796980:intron 50.0%
TCATCCTACGCAGTCAATGG+TGG + chr5_3:9053581-9053600 None:intergenic 50.0%
! CCATTGACTGCGTAGGATGA+CGG - chr5_3:9053581-9053600 Msa0796980:intron 50.0%
TGCTATAGTCGTGCAGAAGG+CGG - chr5_3:9053769-9053788 Msa0796980:intron 50.0%
!! TTCTGGGATCTTCAGTGGCA+AGG + chr5_3:9055207-9055226 None:intergenic 50.0%
!! TGCTCTTCTGGGATCTTCAG+TGG + chr5_3:9055212-9055231 None:intergenic 50.0%
GAAGATCCCAGAAGAGCAGA+CGG - chr5_3:9055214-9055233 Msa0796980:intron 50.0%
CAGATTCAGTCATTCCTGGC+AGG - chr5_3:9055668-9055687 Msa0796980:five_prime_UTR 50.0%
ACACGTCTTGGCTGTCATAC+AGG - chr5_3:9055865-9055884 Msa0796980:five_prime_UTR 50.0%
CACGTCTTGGCTGTCATACA+GGG - chr5_3:9055866-9055885 Msa0796980:five_prime_UTR 50.0%
CTGTCATACAGGGATGATGC+AGG - chr5_3:9055876-9055895 Msa0796980:five_prime_UTR 50.0%
CGTGTTAATGCAGATCCGCT+GGG + chr5_3:9056060-9056079 None:intergenic 50.0%
ACGTGTTAATGCAGATCCGC+TGG + chr5_3:9056061-9056080 None:intergenic 50.0%
ATACCTCATTCGCAAACGCC+AGG + chr5_3:9056235-9056254 None:intergenic 50.0%
! CATCATCTGATCGAAGGTGC+TGG + chr5_3:9056589-9056608 None:intergenic 50.0%
!! GGCTTTGTTTGCGTGTTTGG+AGG - chr5_3:9056780-9056799 Msa0796980:five_prime_UTR 50.0%
TGCGTGTTTGGAGGTAAGGA+AGG - chr5_3:9056789-9056808 Msa0796980:five_prime_UTR 50.0%
GTTTGGAGGTAAGGAAGGAG+AGG - chr5_3:9056794-9056813 Msa0796980:five_prime_UTR 50.0%
!! AGGAGGCGTTGGATCCAAAG+CGG - chr5_3:9050037-9050056 Msa0796980:three_prime_UTR 55.0%
AACGGATGCAACCTCCGCTT+TGG + chr5_3:9050054-9050073 None:intergenic 55.0%
CGGAGGTTGCATCCGTTGAT+CGG - chr5_3:9050057-9050076 Msa0796980:exon 55.0%
!! TGTTCTGGAAGTGGACGGTG+AGG + chr5_3:9050123-9050142 None:intergenic 55.0%
!! TGGAGAGAGTGTTGGAGCGA+GGG + chr5_3:9050208-9050227 None:intergenic 55.0%
!! TTGGAGAGAGTGTTGGAGCG+AGG + chr5_3:9050209-9050228 None:intergenic 55.0%
TACCGACGCGTGTCTGACAT+TGG - chr5_3:9050587-9050606 Msa0796980:intron 55.0%
ACCGACGCGTGTCTGACATT+GGG - chr5_3:9050588-9050607 Msa0796980:intron 55.0%
TCCCAATGTCAGACACGCGT+CGG + chr5_3:9050592-9050611 None:intergenic 55.0%
CGGTTGTTAACAACCGCTGC+CGG - chr5_3:9050733-9050752 Msa0796980:intron 55.0%
GGCGGTAGTTAACTACCGCT+GGG + chr5_3:9050766-9050785 None:intergenic 55.0%
TGGCGGTAGTTAACTACCGC+TGG + chr5_3:9050767-9050786 None:intergenic 55.0%
AGCGGTAGTTAACTACCGCC+AGG - chr5_3:9050766-9050785 Msa0796980:intron 55.0%
GCGGTAGTTAACTACCGCCA+GGG - chr5_3:9050767-9050786 Msa0796980:intron 55.0%
CGGTAGTTAACTACCGCCAG+GGG - chr5_3:9050768-9050787 Msa0796980:intron 55.0%
AACTACCGCCAGGGGCAATA+TGG - chr5_3:9050776-9050795 Msa0796980:intron 55.0%
AGAAGAAGATGAAGCGGCGG+AGG + chr5_3:9051045-9051064 None:intergenic 55.0%
TCCGCAGCTTCTTCCTCCAA+AGG - chr5_3:9051074-9051093 Msa0796980:intron 55.0%
GGAATCTGCGGAACCTTTGG+AGG + chr5_3:9051090-9051109 None:intergenic 55.0%
! TCCGCTTCCAGTATCGGAAG+AGG + chr5_3:9051111-9051130 None:intergenic 55.0%
ACTGGAAGCGGAGCTAGTAG+CGG - chr5_3:9051119-9051138 Msa0796980:intron 55.0%
TACACTTTCGACCGGGTCCT+AGG - chr5_3:9051754-9051773 Msa0796980:intron 55.0%
TACGAACAACCCGGGAAGAG+GGG - chr5_3:9052326-9052345 Msa0796980:intron 55.0%
GACGTGGTCGTTGGCAACAA+GGG - chr5_3:9052355-9052374 Msa0796980:CDS 55.0%
TGAGGATAAGGTCCAGGACG+CGG + chr5_3:9052411-9052430 None:intergenic 55.0%
GTCCTGGACCTTATCCTCAG+AGG - chr5_3:9052412-9052431 Msa0796980:intron 55.0%
! TGCCTCTGAGGATAAGGTCC+AGG + chr5_3:9052417-9052436 None:intergenic 55.0%
! GCTATAGCTGCTTTGCGCTG+TGG - chr5_3:9052863-9052882 Msa0796980:intron 55.0%
CCGTCATCCTACGCAGTCAA+TGG + chr5_3:9053584-9053603 None:intergenic 55.0%
GCCTGCTATAGTCGTGCAGA+AGG - chr5_3:9053766-9053785 Msa0796980:intron 55.0%
GCCTTCTGCACGACTATAGC+AGG + chr5_3:9053770-9053789 None:intergenic 55.0%
GCTATAGTCGTGCAGAAGGC+GGG - chr5_3:9053770-9053789 Msa0796980:intron 55.0%
CTATAGTCGTGCAGAAGGCG+GGG - chr5_3:9053771-9053790 Msa0796980:intron 55.0%
TCGCCATGAGCCTTGGGAAA+TGG - chr5_3:9054554-9054573 Msa0796980:intron 55.0%
CGCCATGAGCCTTGGGAAAT+GGG - chr5_3:9054555-9054574 Msa0796980:intron 55.0%
CTCCCATTTCCCAAGGCTCA+TGG + chr5_3:9054560-9054579 None:intergenic 55.0%
GGGGCTCACCGTATCTTGAT+GGG - chr5_3:9055298-9055317 Msa0796980:CDS 55.0%
!! AGGCGTTGGATCCAAAGCGG+AGG - chr5_3:9050040-9050059 Msa0796980:three_prime_UTR 60.0%
ACTACCGCTGGGAAACACGC+CGG + chr5_3:9050755-9050774 None:intergenic 60.0%
CAAAGCACGAGCCTAGGACC+CGG + chr5_3:9051768-9051787 None:intergenic 60.0%
TAGGCGCTTGTGTCCTGCCT+TGG - chr5_3:9052168-9052187 Msa0796980:intron 60.0%
ACGAACAACCCGGGAAGAGG+GGG - chr5_3:9052327-9052346 Msa0796980:intron 60.0%
GGACGTGGTCGTTGGCAACA+AGG - chr5_3:9052354-9052373 Msa0796980:CDS 60.0%
TGCTTTGCGCTGTGGCCTCT+AGG - chr5_3:9052871-9052890 Msa0796980:intron 60.0%
GTGTTTCATGTGGCGCCTGG+AGG + chr5_3:9053182-9053201 None:intergenic 60.0%
ACGGTGTTTCATGTGGCGCC+TGG + chr5_3:9053185-9053204 None:intergenic 60.0%
GGCTCTCCGTCTGCTCTTCT+GGG + chr5_3:9055223-9055242 None:intergenic 60.0%
GGGGGCTCACCGTATCTTGA+TGG - chr5_3:9055297-9055316 Msa0796980:CDS 60.0%
GTGCCTGGCGTTTGCGAATG+AGG - chr5_3:9056229-9056248 Msa0796980:five_prime_UTR 60.0%
CGCGCCACCTTTCAACCGTT+TGG - chr5_3:9056425-9056444 Msa0796980:five_prime_UTR 60.0%
GGAAGCGGAGCTAGTAGCGG+CGG - chr5_3:9051122-9051141 Msa0796980:intron 65.0%
CGGGTCCTAGGCTCGTGCTT+TGG - chr5_3:9051766-9051785 Msa0796980:intron 65.0%
AACAACCCGGGAAGAGGGGG+TGG - chr5_3:9052330-9052349 Msa0796980:intron 65.0%
GCTGGCATTCTTCCGCGTCC+TGG - chr5_3:9052396-9052415 Msa0796980:intron 65.0%
GGCTTTGCGCTGTAGCCTCC+AGG - chr5_3:9053164-9053183 Msa0796980:intron 65.0%
CGGCTCTCCGTCTGCTCTTC+TGG + chr5_3:9055224-9055243 None:intergenic 65.0%
TTGGCAGGGTGGAGTGTGCC+TGG - chr5_3:9056214-9056233 Msa0796980:five_prime_UTR 65.0%
GCTGGGAAACACGCCGGCAG+CGG + chr5_3:9050749-9050768 None:intergenic 70.0%
GCTGCCGGCGTGTTTCCCAG+CGG - chr5_3:9050748-9050767 Msa0796980:intron 70.0%
AGCGGAGCTAGTAGCGGCGG+TGG - chr5_3:9051125-9051144 Msa0796980:intron 70.0%
GGAGCTAGTAGCGGCGGTGG+CGG - chr5_3:9051128-9051147 Msa0796980:intron 70.0%
AACCCGGGAAGAGGGGGTGG+TGG - chr5_3:9052333-9052352 Msa0796980:CDS 70.0%
GTCCACCACCCCCTCTTCCC+GGG + chr5_3:9052338-9052357 None:intergenic 70.0%
CGTCCACCACCCCCTCTTCC+CGG + chr5_3:9052339-9052358 None:intergenic 70.0%
!! GGAAGAGGGGGTGGTGGACG+TGG - chr5_3:9052339-9052358 Msa0796980:CDS 70.0%
!! GGGGTGGTGGACGTGGTCGT+TGG - chr5_3:9052346-9052365 Msa0796980:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 9049723 9056847 9049723 ID=Msa0796980;Name=Msa0796980
chr5_3 mRNA 9049723 9056847 9049723 ID=Msa0796980-mRNA-1;Parent=Msa0796980;Name=Msa0796980-mRNA-1;_AED=0.29;_eAED=0.29;_QI=1286|1|1|1|1|1|13|341|491
chr5_3 exon 9049723 9050167 9049723 ID=Msa0796980-mRNA-1:exon:3849;Parent=Msa0796980-mRNA-1
chr5_3 exon 9050286 9050349 9050286 ID=Msa0796980-mRNA-1:exon:3848;Parent=Msa0796980-mRNA-1
chr5_3 exon 9050599 9050683 9050599 ID=Msa0796980-mRNA-1:exon:3847;Parent=Msa0796980-mRNA-1
chr5_3 exon 9050853 9050899 9050853 ID=Msa0796980-mRNA-1:exon:3846;Parent=Msa0796980-mRNA-1
chr5_3 exon 9051008 9051061 9051008 ID=Msa0796980-mRNA-1:exon:3845;Parent=Msa0796980-mRNA-1
chr5_3 exon 9051177 9051393 9051177 ID=Msa0796980-mRNA-1:exon:3844;Parent=Msa0796980-mRNA-1
chr5_3 exon 9051912 9052036 9051912 ID=Msa0796980-mRNA-1:exon:3843;Parent=Msa0796980-mRNA-1
chr5_3 exon 9052196 9052219 9052196 ID=Msa0796980-mRNA-1:exon:3842;Parent=Msa0796980-mRNA-1
chr5_3 exon 9052333 9052412 9052333 ID=Msa0796980-mRNA-1:exon:3841;Parent=Msa0796980-mRNA-1
chr5_3 exon 9052556 9052634 9052556 ID=Msa0796980-mRNA-1:exon:3840;Parent=Msa0796980-mRNA-1
chr5_3 exon 9052751 9052816 9052751 ID=Msa0796980-mRNA-1:exon:3839;Parent=Msa0796980-mRNA-1
chr5_3 exon 9054016 9054266 9054016 ID=Msa0796980-mRNA-1:exon:3838;Parent=Msa0796980-mRNA-1
chr5_3 exon 9055282 9056847 9055282 ID=Msa0796980-mRNA-1:exon:3837;Parent=Msa0796980-mRNA-1
chr5_3 five_prime_UTR 9055562 9056847 9055562 ID=Msa0796980-mRNA-1:five_prime_utr;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9055282 9055561 9055282 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9054016 9054266 9054016 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9052751 9052816 9052751 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9052556 9052634 9052556 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9052333 9052412 9052333 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9052196 9052219 9052196 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9051912 9052036 9051912 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9051177 9051393 9051177 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9051008 9051061 9051008 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9050853 9050899 9050853 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9050599 9050683 9050599 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9050286 9050349 9050286 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 CDS 9050064 9050167 9050064 ID=Msa0796980-mRNA-1:cds;Parent=Msa0796980-mRNA-1
chr5_3 three_prime_UTR 9049723 9050063 9049723 ID=Msa0796980-mRNA-1:three_prime_utr;Parent=Msa0796980-mRNA-1
Gene Sequence

>Msa0796980

ATGGGACCCACTCTTCTTCTTCGTCTTCTTCTTCCTCCGCCGCTTCATCTTCTTCTTCTTCATCTTCCGCAGCTTCTTCCTCCAAAGGTTCCGCAGATTCCTCTTCCGATACTGGAAGCGGAGCTAGTAGCGGCGGTGGCGGTGATGATGAAGAAAATGGTGATGTTGTTGGTTGATTCTCATGATGATGATGATGATGATCATGATGATAGAGATCTGTTTGGTGATGATAATGAAGATTATTGTAAAACCCTTGCTAAAAGTCCTTACCCTATTCCTGTATTGCCTCCCATCCGTAATAATACGAACAACCCGGGAAGAGGGGGTGGTGGACGTGGTCGTTGGCAACAAGGGCAGCATAATGATAGAGGAGCTGGCATTCTTCCGCGTCCTGGACCTTATCCTCAGAGGCAGAATTTTGGGTATGGTAATAGGTTTCAGAATGGCCACCGCGATGAACGTTTTGTCTCTGAAATGAAGCTCTCGAAAAGTGAAGAAACTCTGTCAAGAAAGGTTATTGCTTTTCAAGAGCCTTGTGAACTTGCCTGCTATAGTCGTGCAGAAGGCGGGGAAGTGTATTTTGATGATCGTAGCTTGAGACTTTTTAAACGCCATATCACTGAAGATATTGGAGCTGATTTGAACGAAGGATATGATACATACATTCCCAAAAAAGACTTAGGCTCAGAAGGTTATGGCGATCTTCTTGCTTGCATAAGAGATAAAAAAATCCATCTTCAAAACATCCATTTTGTGACGTACCGCAACAATCTGAACAAGATACTTGCTACGGCTTATATTCGCCATGAGCCTTGGGAAATGGGAGTACACAAAAGGAATGGTGTTGTCTATCTCGATGTGCACAAGTTACCAGAAAGACCACAAAGTGATTTAGATCGCAGGAGATGTTATCTGGGTTACTCTTTTGAGAGCCTTGCCACTGAAGATCCCAGAAGAGCAGACGGAGAGCCGATACATGATGTTGATGCCAATGTTGAATTTTGTTCTGTGATTAAGACAAAATTGGGGGCTCACCGTATCTTGATGGGTGCTGAGATGGATTGCTGTGATACGACTACTGATGGAAAGAGATTTTATGTGGAGTTAAAGACAAGTTACGAGTTGAATTATCGTAACGAGGAAAAATTTGAGAGACAGAAACTGCTAAAGTTTTGGATTCAGTCATTCCTGGCAGGCGTTCCATATATTTGTATTGGATTTAGGGATGATGCAGGCCATCTTGTTCGGACTGAAATGCTTAGAACCAAAGATATTACACAGAGAATAAAAATGAAGGGCTACTGGCAGGGTGGAGTGTGCCTGGCGTTTGCGAATGAGGTATTATGCTGGCTTTATGGAACAGTCAAAGAAAATGAAGATTACATATTGCAGTTCGCGCCACCTTTCAACCGTTTGGAACTTCTGCAAGCTCACTCTTGTCCAGATGTAATAACAAGTCACCTGGAGCTGTTGTGA
Protein sequence

>Msa0796980

MGPTLLLRLLLPPPLHLLLLHLPQLLPPKVPQIPLPILEAELVAAVAVMMKKMVMLLVDSHDDDDDDHDDRDLFGDDNEDYCKTLAKSPYPIPVLPPIRNNTNNPGRGGGGRGRWQQGQHNDRGAGILPRPGPYPQRQNFGYGNRFQNGHRDERFVSEMKLSKSEETLSRKVIAFQEPCELACYSRAEGGEVYFDDRSLRLFKRHITEDIGADLNEGYDTYIPKKDLGSEGYGDLLACIRDKKIHLQNIHFVTYRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYLGYSFESLATEDPRRADGEPIHDVDANVEFCSVIKTKLGAHRILMGAEMDCCDTTTDGKRFYVELKTSYELNYRNEEKFERQKLLKFWIQSFLAGVPYICIGFRDDAGHLVRTEMLRTKDITQRIKMKGYWQGGVCLAFANEVLCWLYGTVKENEDYILQFAPPFNRLELLQAHSCPDVITSHLELL*