Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797680 | sp|Q564G7|GMGT1_CYATE | 63.182 | 440 | 145 | 4 | 1 | 430 | 1 | 433 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797680 | G7K2G3 | 97.216 | 431 | 12 | 0 | 1 | 431 | 15 | 445 | 0.0 | 879 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0797680 | Msa0835160 | 0.809148 | 2.183437e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797680 | MtrunA17_Chr5g0401011 | 97.216 | 431 | 12 | 0 | 1 | 431 | 15 | 445 | 0.0 | 879 |
| Msa0797680 | MtrunA17_Chr4g0054201 | 63.825 | 434 | 144 | 4 | 7 | 432 | 455 | 883 | 0.0 | 583 |
| Msa0797680 | MtrunA17_Chr4g0054201 | 58.000 | 350 | 138 | 2 | 67 | 413 | 60 | 403 | 1.63e-150 | 449 |
| Msa0797680 | MtrunA17_Chr4g0061061 | 46.857 | 350 | 146 | 7 | 71 | 417 | 100 | 412 | 4.81e-110 | 331 |
| Msa0797680 | MtrunA17_Chr4g0067341 | 44.262 | 366 | 160 | 7 | 76 | 432 | 107 | 437 | 9.12e-110 | 331 |
| Msa0797680 | MtrunA17_Chr7g0269221 | 44.540 | 348 | 155 | 6 | 81 | 425 | 124 | 436 | 6.18e-108 | 327 |
| Msa0797680 | MtrunA17_Chr3g0091621 | 40.662 | 423 | 202 | 10 | 5 | 417 | 34 | 417 | 2.53e-106 | 322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797680 | AT2G22900.1 | 62.442 | 434 | 159 | 3 | 1 | 432 | 16 | 447 | 0.0 | 560 |
| Msa0797680 | AT4G37690.1 | 60.138 | 434 | 167 | 3 | 1 | 432 | 1 | 430 | 0.0 | 551 |
| Msa0797680 | AT5G07720.1 | 40.610 | 426 | 207 | 7 | 1 | 417 | 33 | 421 | 7.31e-113 | 339 |
| Msa0797680 | AT3G62720.2 | 44.357 | 381 | 160 | 6 | 54 | 422 | 86 | 426 | 3.82e-111 | 335 |
| Msa0797680 | AT3G62720.1 | 44.357 | 381 | 160 | 6 | 54 | 422 | 86 | 426 | 3.82e-111 | 335 |
| Msa0797680 | AT1G18690.3 | 43.651 | 378 | 172 | 7 | 43 | 417 | 141 | 480 | 6.61e-110 | 333 |
| Msa0797680 | AT1G18690.4 | 43.651 | 378 | 172 | 7 | 43 | 417 | 141 | 480 | 6.61e-110 | 333 |
| Msa0797680 | AT1G18690.2 | 43.651 | 378 | 172 | 7 | 43 | 417 | 141 | 480 | 6.61e-110 | 333 |
| Msa0797680 | AT1G18690.1 | 43.651 | 378 | 172 | 7 | 43 | 417 | 141 | 480 | 6.61e-110 | 333 |
| Msa0797680 | AT1G74380.1 | 45.507 | 345 | 149 | 6 | 76 | 417 | 114 | 422 | 3.50e-109 | 330 |
| Msa0797680 | AT4G02500.1 | 43.909 | 353 | 160 | 4 | 76 | 425 | 113 | 430 | 5.59e-108 | 327 |
| Msa0797680 | AT4G38310.1 | 69.231 | 117 | 35 | 1 | 64 | 179 | 1 | 117 | 3.26e-55 | 179 |
Find 108 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAAGTTATTCGTAAATT+TGG | 0.144278 | 5_3:-9919936 | Msa0797680:CDS |
| TCCTAAGATGTTTGCTTATT+GGG | 0.175052 | 5_3:-9920672 | Msa0797680:CDS |
| CACCAGATCCACTCTGCTTC+TGG | 0.193415 | 5_3:+9920611 | None:intergenic |
| TTCATCCCAGTCGTCTATTT+TGG | 0.194915 | 5_3:+9920892 | None:intergenic |
| ATCCTAAGATGTTTGCTTAT+TGG | 0.207679 | 5_3:-9920673 | Msa0797680:CDS |
| TATAGAAGAAGATTTGTTTC+TGG | 0.226424 | 5_3:+9921129 | None:intergenic |
| TCTGATGGCTTTCTCTTCCT+TGG | 0.293026 | 5_3:-9921100 | Msa0797680:CDS |
| TTACCCCATTCTTCATAATC+TGG | 0.308324 | 5_3:+9920380 | None:intergenic |
| GTCATGGTATACTCCATTTC+AGG | 0.314443 | 5_3:+9920917 | None:intergenic |
| ATAGAAGAAGATTTGTTTCT+GGG | 0.318466 | 5_3:+9921130 | None:intergenic |
| ATGGAGGCTTGGGCTGGAAT+GGG | 0.324947 | 5_3:-9920413 | Msa0797680:CDS |
| TTAAGGTAAGGTTGTCGTTT+GGG | 0.329411 | 5_3:+9921020 | None:intergenic |
| ATCATTGCAGCTTTCACAAC+TGG | 0.331180 | 5_3:+9920641 | None:intergenic |
| CATGGAGGCTTGGGCTGGAA+TGG | 0.334539 | 5_3:-9920414 | Msa0797680:CDS |
| GCCCAATAAGCAAACATCTT+AGG | 0.336434 | 5_3:+9920671 | None:intergenic |
| AATATTACTTCGAGGGGTAT+TGG | 0.338476 | 5_3:-9920238 | Msa0797680:CDS |
| GTGGATTACTCTCGTATTCA+TGG | 0.344402 | 5_3:-9920728 | Msa0797680:CDS |
| TCAATGGTCATTAGATTTCA+TGG | 0.346153 | 5_3:-9920432 | Msa0797680:CDS |
| CAGGATCATCGTAGAATGTT+TGG | 0.347067 | 5_3:+9920936 | None:intergenic |
| AACAACAAATGGTCACCTAT+TGG | 0.350530 | 5_3:+9920770 | None:intergenic |
| TCTTCATAATCTGGGCTTTG+TGG | 0.354799 | 5_3:+9920389 | None:intergenic |
| GATCATAACCTTGTTGTTCA+TGG | 0.356395 | 5_3:-9920527 | Msa0797680:CDS |
| ATTAGATTTCATGGAGGCTT+GGG | 0.362925 | 5_3:-9920423 | Msa0797680:CDS |
| GTAAGGTTGTCGTTTGGGAT+GGG | 0.369829 | 5_3:+9921025 | None:intergenic |
| ATATTACTTCGAGGGGTATT+GGG | 0.374107 | 5_3:-9920237 | Msa0797680:CDS |
| CATAAAGATCTTGGGGATAA+TGG | 0.376635 | 5_3:-9919906 | Msa0797680:CDS |
| CATTAGATTTCATGGAGGCT+TGG | 0.381012 | 5_3:-9920424 | Msa0797680:CDS |
| ACCAGATCCACTCTGCTTCT+GGG | 0.383710 | 5_3:+9920612 | None:intergenic |
| GGTAAGGTTGTCGTTTGGGA+TGG | 0.385202 | 5_3:+9921024 | None:intergenic |
| GAAGATTTGTTTCTGGGAAT+GGG | 0.385239 | 5_3:+9921136 | None:intergenic |
| TATTTGAAAGATGCTGGTTA+TGG | 0.388530 | 5_3:-9920089 | Msa0797680:CDS |
| AGAAGATTTGTTTCTGGGAA+TGG | 0.391546 | 5_3:+9921135 | None:intergenic |
| TACCCCATTCTTCATAATCT+GGG | 0.392557 | 5_3:+9920381 | None:intergenic |
| TGAAGAATCTTAACAACAAA+TGG | 0.394171 | 5_3:+9920759 | None:intergenic |
| CTGGTTATGGTAAAGGAAGT+TGG | 0.399264 | 5_3:-9920076 | Msa0797680:CDS |
| TGTACACTGCTGATGCTTGT+TGG | 0.406742 | 5_3:-9919992 | Msa0797680:CDS |
| GAAGAGTATTTGAAAGATGC+TGG | 0.407850 | 5_3:-9920095 | Msa0797680:CDS |
| TAAGGTTGTCGTTTGGGATG+GGG | 0.409821 | 5_3:+9921026 | None:intergenic |
| CTTCATAATCTGGGCTTTGT+GGG | 0.412052 | 5_3:+9920390 | None:intergenic |
| TCTTCTATATTTCTCTCTGA+TGG | 0.418803 | 5_3:-9921115 | Msa0797680:CDS |
| GATGGCTTTCTCTTCCTTGG+AGG | 0.422150 | 5_3:-9921097 | Msa0797680:CDS |
| ACCCAGAAGCAGAGTGGATC+TGG | 0.422459 | 5_3:-9920613 | Msa0797680:CDS |
| CATGAGAAACGGAGCTGGAC+CGG | 0.428443 | 5_3:-9920488 | Msa0797680:CDS |
| TTTAAGGTAAGGTTGTCGTT+TGG | 0.432980 | 5_3:+9921019 | None:intergenic |
| AGCAAAGGAAAGAGTGTTGA+TGG | 0.438346 | 5_3:-9920825 | Msa0797680:CDS |
| ATAACCTTGTTGTTCATGGC+TGG | 0.442241 | 5_3:-9920523 | Msa0797680:CDS |
| AAAGATGCTGGTTATGGTAA+AGG | 0.444724 | 5_3:-9920083 | Msa0797680:CDS |
| GATTTCATGGAGGCTTGGGC+TGG | 0.447837 | 5_3:-9920419 | Msa0797680:CDS |
| AAGCCCAGATTATGAAGAAT+GGG | 0.454167 | 5_3:-9920384 | Msa0797680:CDS |
| ATTCTACGATGATCCTGAAA+TGG | 0.454311 | 5_3:-9920930 | Msa0797680:CDS |
| ACTGCTGATGCTTGTTGGAA+TGG | 0.456658 | 5_3:-9919987 | Msa0797680:CDS |
| TTTCTCGATCGCGATCAGAT+AGG | 0.459063 | 5_3:+9920295 | None:intergenic |
| CCTGTAAAATGTGTAACAAA+TGG | 0.462913 | 5_3:+9920047 | None:intergenic |
| CTGCTGATGCTTGTTGGAAT+GGG | 0.463785 | 5_3:-9919986 | Msa0797680:CDS |
| CGGTCCAGCTCCGTTTCTCA+TGG | 0.469309 | 5_3:+9920489 | None:intergenic |
| CATCATCCGTCTTTCTCTGC+AGG | 0.478033 | 5_3:-9920848 | Msa0797680:CDS |
| TCTCCGTGCAAGAATCCAAT+AGG | 0.480437 | 5_3:-9920785 | Msa0797680:CDS |
| GCCTGTCTGATCGTCTGACT+CGG | 0.492017 | 5_3:+9920322 | None:intergenic |
| GAAAGAGTGTTGATGGTCAC+TGG | 0.495025 | 5_3:-9920818 | Msa0797680:CDS |
| TCATTATACTTCCCACTACA+AGG | 0.496339 | 5_3:+9920017 | None:intergenic |
| GCATGACGCCTTCTTAACTT+AGG | 0.496571 | 5_3:+9920152 | None:intergenic |
| CTCACTTGATCCATGAGAAA+CGG | 0.497365 | 5_3:-9920499 | Msa0797680:CDS |
| ATTTATCTTTAAAAGTTGAC+CGG | 0.498543 | 5_3:+9920351 | None:intergenic |
| AAAGCCCAGATTATGAAGAA+TGG | 0.499353 | 5_3:-9920385 | Msa0797680:CDS |
| AAGAATGGGGTAAGACTCTC+CGG | 0.506398 | 5_3:-9920370 | Msa0797680:CDS |
| ATTGGATTCTTGCACGGAGA+AGG | 0.509563 | 5_3:+9920788 | None:intergenic |
| GCTTCCTCTCAAACGTTACA+AGG | 0.512911 | 5_3:-9920549 | Msa0797680:CDS |
| TCGTAGAATGTTTGGTCTGG+TGG | 0.513684 | 5_3:+9920944 | None:intergenic |
| AGATGCATTGTTCACCGACA+TGG | 0.516301 | 5_3:-9920579 | Msa0797680:CDS |
| GCTGACAAGATTTATCTAGA+AGG | 0.520122 | 5_3:-9920263 | Msa0797680:CDS |
| CATTCTTGAGGATAATCAAA+AGG | 0.522976 | 5_3:+9919870 | None:intergenic |
| CCCGAGTCAGACGATCAGAC+AGG | 0.525329 | 5_3:-9920323 | Msa0797680:CDS |
| TCATCGTAGAATGTTTGGTC+TGG | 0.529616 | 5_3:+9920941 | None:intergenic |
| TGACCACCAAAATAGACGAC+TGG | 0.534163 | 5_3:-9920898 | Msa0797680:CDS |
| GGGTATTGGGAAGAGATAGT+AGG | 0.535734 | 5_3:-9920224 | Msa0797680:CDS |
| GTCTTTCTCTGCAGGAGCAA+AGG | 0.536163 | 5_3:-9920840 | Msa0797680:CDS |
| GTTTGGGATGGGGTTTGTGA+AGG | 0.539018 | 5_3:+9921036 | None:intergenic |
| ATGAGAAACGGAGCTGGACC+GGG | 0.551182 | 5_3:-9920487 | Msa0797680:CDS |
| TTTGCTCCTGCAGAGAAAGA+CGG | 0.551182 | 5_3:+9920842 | None:intergenic |
| TCATTGCAGCTTTCACAACT+GGG | 0.553622 | 5_3:+9920642 | None:intergenic |
| ACAGGTTGTCAACCTTGTAG+TGG | 0.558357 | 5_3:-9920029 | Msa0797680:CDS |
| AGTTGTGAAAGCTGCAATGA+TGG | 0.558410 | 5_3:-9920639 | Msa0797680:CDS |
| TGATCCATGAGAAACGGAGC+TGG | 0.564919 | 5_3:-9920493 | Msa0797680:CDS |
| AAGTTGAGCCTAAGTTAAGA+AGG | 0.567104 | 5_3:-9920160 | Msa0797680:CDS |
| CCTGTCTGATCGTCTGACTC+GGG | 0.569637 | 5_3:+9920323 | None:intergenic |
| CAGGTTGTCAACCTTGTAGT+GGG | 0.588604 | 5_3:-9920028 | Msa0797680:CDS |
| ATGAAGCATAATCATTCTTG+AGG | 0.588958 | 5_3:+9919858 | None:intergenic |
| GAGCTGAAAATGCTCCTCCA+AGG | 0.589197 | 5_3:+9921083 | None:intergenic |
| GAAGGCGAATATTACTTCGA+GGG | 0.591672 | 5_3:-9920245 | Msa0797680:CDS |
| AGCTGGACCGGGTTAAACGC+TGG | 0.598150 | 5_3:-9920476 | Msa0797680:CDS |
| AGAAGGCGAATATTACTTCG+AGG | 0.599202 | 5_3:-9920246 | Msa0797680:CDS |
| TGATCCTTGTAACGTTTGAG+AGG | 0.599914 | 5_3:+9920545 | None:intergenic |
| TCACCTATTGGATTCTTGCA+CGG | 0.608907 | 5_3:+9920782 | None:intergenic |
| GACCACCAAAATAGACGACT+GGG | 0.610284 | 5_3:-9920897 | Msa0797680:CDS |
| TGGTGGATCAAAGCGCAGAT+CGG | 0.619292 | 5_3:+9920961 | None:intergenic |
| CAGAAGCAGAGTGGATCTGG+TGG | 0.624600 | 5_3:-9920610 | Msa0797680:CDS |
| AAACACACCAGCGTTTAACC+CGG | 0.635784 | 5_3:+9920469 | None:intergenic |
| CGTTTCTCATGGATCAAGTG+AGG | 0.643998 | 5_3:+9920500 | None:intergenic |
| AAGGCGAATATTACTTCGAG+GGG | 0.647787 | 5_3:-9920244 | Msa0797680:CDS |
| AGGAAGCTTGAAATCCATGT+CGG | 0.666037 | 5_3:+9920565 | None:intergenic |
| GGGATGAAAAGCGTGAGGAG+TGG | 0.666595 | 5_3:-9920877 | Msa0797680:CDS |
| AGAAGCAGAGTGGATCTGGT+GGG | 0.667841 | 5_3:-9920609 | Msa0797680:CDS |
| AGCCCAGATTATGAAGAATG+GGG | 0.678392 | 5_3:-9920383 | Msa0797680:CDS |
| CGACTGGGATGAAAAGCGTG+AGG | 0.682004 | 5_3:-9920882 | Msa0797680:CDS |
| GAGGCCAGCCATGAACAACA+AGG | 0.700083 | 5_3:+9920519 | None:intergenic |
| TGGCACACCCAGAAGCAGAG+TGG | 0.701722 | 5_3:-9920619 | Msa0797680:CDS |
| GAGAAAGTGAGTGAAGCTCA+TGG | 0.705834 | 5_3:-9920128 | Msa0797680:CDS |
| ATGGTCATTAGATTTCATGG+AGG | 0.731958 | 5_3:-9920429 | Msa0797680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATATTTTTTACTAATGTTT+GGG | + | chr5_3:9920822-9920841 | None:intergenic | 15.0% |
| !!! | TCATATTTTTTACTAATGTT+TGG | + | chr5_3:9920823-9920842 | None:intergenic | 15.0% |
| !!! | CATATTTTTTACTAATGTTT+GGG | + | chr5_3:9920822-9920841 | None:intergenic | 15.0% |
| !!! | TCATATTTTTTACTAATGTT+TGG | + | chr5_3:9920823-9920842 | None:intergenic | 15.0% |
| !! | AAGATTCTTCAAAAATAAAG+TGG | - | chr5_3:9920267-9920286 | Msa0797680:CDS | 20.0% |
| !!! | ATTTATCTTTAAAAGTTGAC+CGG | + | chr5_3:9920666-9920685 | None:intergenic | 20.0% |
| !! | AATCAAGTTATTCGTAAATT+TGG | - | chr5_3:9921078-9921097 | Msa0797680:CDS | 20.0% |
| !! | AAGATTCTTCAAAAATAAAG+TGG | - | chr5_3:9920267-9920286 | Msa0797680:CDS | 20.0% |
| !!! | ATTTATCTTTAAAAGTTGAC+CGG | + | chr5_3:9920666-9920685 | None:intergenic | 20.0% |
| !! | AATCAAGTTATTCGTAAATT+TGG | - | chr5_3:9921078-9921097 | Msa0797680:CDS | 20.0% |
| !! | ATAGAAGAAGATTTGTTTCT+GGG | + | chr5_3:9919887-9919906 | None:intergenic | 25.0% |
| !! | TATAGAAGAAGATTTGTTTC+TGG | + | chr5_3:9919888-9919907 | None:intergenic | 25.0% |
| ! | TGAAGAATCTTAACAACAAA+TGG | + | chr5_3:9920258-9920277 | None:intergenic | 25.0% |
| !! | ATAGAAGAAGATTTGTTTCT+GGG | + | chr5_3:9919887-9919906 | None:intergenic | 25.0% |
| !! | TATAGAAGAAGATTTGTTTC+TGG | + | chr5_3:9919888-9919907 | None:intergenic | 25.0% |
| ! | TGAAGAATCTTAACAACAAA+TGG | + | chr5_3:9920258-9920277 | None:intergenic | 25.0% |
| TCTTCTATATTTCTCTCTGA+TGG | - | chr5_3:9919899-9919918 | Msa0797680:CDS | 30.0% | |
| ! | TTTCAGCTCTTTTACTTGTT+TGG | - | chr5_3:9919945-9919964 | Msa0797680:CDS | 30.0% |
| ! | TTCAGCTCTTTTACTTGTTT+GGG | - | chr5_3:9919946-9919965 | Msa0797680:CDS | 30.0% |
| !!! | TTTTGTGAGGTTTTAAGGTA+AGG | + | chr5_3:9920009-9920028 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGTGAGGTTTTA+AGG | + | chr5_3:9920014-9920033 | None:intergenic | 30.0% |
| ATCCTAAGATGTTTGCTTAT+TGG | - | chr5_3:9920341-9920360 | Msa0797680:CDS | 30.0% | |
| TCCTAAGATGTTTGCTTATT+GGG | - | chr5_3:9920342-9920361 | Msa0797680:CDS | 30.0% | |
| TCAATGGTCATTAGATTTCA+TGG | - | chr5_3:9920582-9920601 | Msa0797680:CDS | 30.0% | |
| ! | TATTTGAAAGATGCTGGTTA+TGG | - | chr5_3:9920925-9920944 | Msa0797680:CDS | 30.0% |
| CCTGTAAAATGTGTAACAAA+TGG | + | chr5_3:9920970-9920989 | None:intergenic | 30.0% | |
| !! | CCATTTGTTACACATTTTAC+AGG | - | chr5_3:9920967-9920986 | Msa0797680:CDS | 30.0% |
| ! | GTTTTGTGCATAAAGATCTT+GGG | - | chr5_3:9921100-9921119 | Msa0797680:CDS | 30.0% |
| ! | TTTTGTGCATAAAGATCTTG+GGG | - | chr5_3:9921101-9921120 | Msa0797680:CDS | 30.0% |
| CATTCTTGAGGATAATCAAA+AGG | + | chr5_3:9921147-9921166 | None:intergenic | 30.0% | |
| TCTTCTATATTTCTCTCTGA+TGG | - | chr5_3:9919899-9919918 | Msa0797680:CDS | 30.0% | |
| ! | TTTCAGCTCTTTTACTTGTT+TGG | - | chr5_3:9919945-9919964 | Msa0797680:CDS | 30.0% |
| ! | TTCAGCTCTTTTACTTGTTT+GGG | - | chr5_3:9919946-9919965 | Msa0797680:CDS | 30.0% |
| !!! | TTTTGTGAGGTTTTAAGGTA+AGG | + | chr5_3:9920009-9920028 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGTGAGGTTTTA+AGG | + | chr5_3:9920014-9920033 | None:intergenic | 30.0% |
| ATCCTAAGATGTTTGCTTAT+TGG | - | chr5_3:9920341-9920360 | Msa0797680:CDS | 30.0% | |
| TCCTAAGATGTTTGCTTATT+GGG | - | chr5_3:9920342-9920361 | Msa0797680:CDS | 30.0% | |
| TCAATGGTCATTAGATTTCA+TGG | - | chr5_3:9920582-9920601 | Msa0797680:CDS | 30.0% | |
| ! | TATTTGAAAGATGCTGGTTA+TGG | - | chr5_3:9920925-9920944 | Msa0797680:CDS | 30.0% |
| CCTGTAAAATGTGTAACAAA+TGG | + | chr5_3:9920970-9920989 | None:intergenic | 30.0% | |
| !! | CCATTTGTTACACATTTTAC+AGG | - | chr5_3:9920967-9920986 | Msa0797680:CDS | 30.0% |
| ! | GTTTTGTGCATAAAGATCTT+GGG | - | chr5_3:9921100-9921119 | Msa0797680:CDS | 30.0% |
| ! | TTTTGTGCATAAAGATCTTG+GGG | - | chr5_3:9921101-9921120 | Msa0797680:CDS | 30.0% |
| CATTCTTGAGGATAATCAAA+AGG | + | chr5_3:9921147-9921166 | None:intergenic | 30.0% | |
| !! | GAAGATTTGTTTCTGGGAAT+GGG | + | chr5_3:9919881-9919900 | None:intergenic | 35.0% |
| !! | AGAAGATTTGTTTCTGGGAA+TGG | + | chr5_3:9919882-9919901 | None:intergenic | 35.0% |
| ! | TCAGCTCTTTTACTTGTTTG+GGG | - | chr5_3:9919947-9919966 | Msa0797680:CDS | 35.0% |
| ! | TTAAGGTAAGGTTGTCGTTT+GGG | + | chr5_3:9919997-9920016 | None:intergenic | 35.0% |
| ! | TTTAAGGTAAGGTTGTCGTT+TGG | + | chr5_3:9919998-9920017 | None:intergenic | 35.0% |
| !!! | GAAACAACGTTGTTTTTGTG+AGG | + | chr5_3:9920022-9920041 | None:intergenic | 35.0% |
| ATTCTACGATGATCCTGAAA+TGG | - | chr5_3:9920084-9920103 | Msa0797680:CDS | 35.0% | |
| AACAACAAATGGTCACCTAT+TGG | + | chr5_3:9920247-9920266 | None:intergenic | 35.0% | |
| !! | GATCATAACCTTGTTGTTCA+TGG | - | chr5_3:9920487-9920506 | Msa0797680:CDS | 35.0% |
| ! | TTTTGATCAGGAACTGTCAA+TGG | - | chr5_3:9920566-9920585 | Msa0797680:CDS | 35.0% |
| ATGGTCATTAGATTTCATGG+AGG | - | chr5_3:9920585-9920604 | Msa0797680:CDS | 35.0% | |
| ATTAGATTTCATGGAGGCTT+GGG | - | chr5_3:9920591-9920610 | Msa0797680:CDS | 35.0% | |
| AAAGCCCAGATTATGAAGAA+TGG | - | chr5_3:9920629-9920648 | Msa0797680:CDS | 35.0% | |
| AAGCCCAGATTATGAAGAAT+GGG | - | chr5_3:9920630-9920649 | Msa0797680:CDS | 35.0% | |
| TACCCCATTCTTCATAATCT+GGG | + | chr5_3:9920636-9920655 | None:intergenic | 35.0% | |
| TTACCCCATTCTTCATAATC+TGG | + | chr5_3:9920637-9920656 | None:intergenic | 35.0% | |
| GCTGACAAGATTTATCTAGA+AGG | - | chr5_3:9920751-9920770 | Msa0797680:CDS | 35.0% | |
| ! | AATATTACTTCGAGGGGTAT+TGG | - | chr5_3:9920776-9920795 | Msa0797680:CDS | 35.0% |
| !! | ATATTACTTCGAGGGGTATT+GGG | - | chr5_3:9920777-9920796 | Msa0797680:CDS | 35.0% |
| AAGTTGAGCCTAAGTTAAGA+AGG | - | chr5_3:9920854-9920873 | Msa0797680:CDS | 35.0% | |
| !! | GAAGAGTATTTGAAAGATGC+TGG | - | chr5_3:9920919-9920938 | Msa0797680:CDS | 35.0% |
| ! | AAAGATGCTGGTTATGGTAA+AGG | - | chr5_3:9920931-9920950 | Msa0797680:CDS | 35.0% |
| TCATTATACTTCCCACTACA+AGG | + | chr5_3:9921000-9921019 | None:intergenic | 35.0% | |
| !! | GGTTTTGTGCATAAAGATCT+TGG | - | chr5_3:9921099-9921118 | Msa0797680:CDS | 35.0% |
| CATAAAGATCTTGGGGATAA+TGG | - | chr5_3:9921108-9921127 | Msa0797680:CDS | 35.0% | |
| !! | GAAGATTTGTTTCTGGGAAT+GGG | + | chr5_3:9919881-9919900 | None:intergenic | 35.0% |
| !! | AGAAGATTTGTTTCTGGGAA+TGG | + | chr5_3:9919882-9919901 | None:intergenic | 35.0% |
| ! | TCAGCTCTTTTACTTGTTTG+GGG | - | chr5_3:9919947-9919966 | Msa0797680:CDS | 35.0% |
| ! | TTAAGGTAAGGTTGTCGTTT+GGG | + | chr5_3:9919997-9920016 | None:intergenic | 35.0% |
| ! | TTTAAGGTAAGGTTGTCGTT+TGG | + | chr5_3:9919998-9920017 | None:intergenic | 35.0% |
| !!! | GAAACAACGTTGTTTTTGTG+AGG | + | chr5_3:9920022-9920041 | None:intergenic | 35.0% |
| ATTCTACGATGATCCTGAAA+TGG | - | chr5_3:9920084-9920103 | Msa0797680:CDS | 35.0% | |
| AACAACAAATGGTCACCTAT+TGG | + | chr5_3:9920247-9920266 | None:intergenic | 35.0% | |
| !! | GATCATAACCTTGTTGTTCA+TGG | - | chr5_3:9920487-9920506 | Msa0797680:CDS | 35.0% |
| ! | TTTTGATCAGGAACTGTCAA+TGG | - | chr5_3:9920566-9920585 | Msa0797680:CDS | 35.0% |
| ATGGTCATTAGATTTCATGG+AGG | - | chr5_3:9920585-9920604 | Msa0797680:CDS | 35.0% | |
| ATTAGATTTCATGGAGGCTT+GGG | - | chr5_3:9920591-9920610 | Msa0797680:CDS | 35.0% | |
| AAAGCCCAGATTATGAAGAA+TGG | - | chr5_3:9920629-9920648 | Msa0797680:CDS | 35.0% | |
| AAGCCCAGATTATGAAGAAT+GGG | - | chr5_3:9920630-9920649 | Msa0797680:CDS | 35.0% | |
| TACCCCATTCTTCATAATCT+GGG | + | chr5_3:9920636-9920655 | None:intergenic | 35.0% | |
| TTACCCCATTCTTCATAATC+TGG | + | chr5_3:9920637-9920656 | None:intergenic | 35.0% | |
| GCTGACAAGATTTATCTAGA+AGG | - | chr5_3:9920751-9920770 | Msa0797680:CDS | 35.0% | |
| ! | AATATTACTTCGAGGGGTAT+TGG | - | chr5_3:9920776-9920795 | Msa0797680:CDS | 35.0% |
| !! | ATATTACTTCGAGGGGTATT+GGG | - | chr5_3:9920777-9920796 | Msa0797680:CDS | 35.0% |
| AAGTTGAGCCTAAGTTAAGA+AGG | - | chr5_3:9920854-9920873 | Msa0797680:CDS | 35.0% | |
| !! | GAAGAGTATTTGAAAGATGC+TGG | - | chr5_3:9920919-9920938 | Msa0797680:CDS | 35.0% |
| ! | AAAGATGCTGGTTATGGTAA+AGG | - | chr5_3:9920931-9920950 | Msa0797680:CDS | 35.0% |
| TCATTATACTTCCCACTACA+AGG | + | chr5_3:9921000-9921019 | None:intergenic | 35.0% | |
| !! | GGTTTTGTGCATAAAGATCT+TGG | - | chr5_3:9921099-9921118 | Msa0797680:CDS | 35.0% |
| CATAAAGATCTTGGGGATAA+TGG | - | chr5_3:9921108-9921127 | Msa0797680:CDS | 35.0% | |
| TCATCGTAGAATGTTTGGTC+TGG | + | chr5_3:9920076-9920095 | None:intergenic | 40.0% | |
| CAGGATCATCGTAGAATGTT+TGG | + | chr5_3:9920081-9920100 | None:intergenic | 40.0% | |
| GTCATGGTATACTCCATTTC+AGG | + | chr5_3:9920100-9920119 | None:intergenic | 40.0% | |
| ! | TTCATCCCAGTCGTCTATTT+TGG | + | chr5_3:9920125-9920144 | None:intergenic | 40.0% |
| !! | AGCAAAGGAAAGAGTGTTGA+TGG | - | chr5_3:9920189-9920208 | Msa0797680:CDS | 40.0% |
| TCACCTATTGGATTCTTGCA+CGG | + | chr5_3:9920235-9920254 | None:intergenic | 40.0% | |
| ! | GTGGATTACTCTCGTATTCA+TGG | - | chr5_3:9920286-9920305 | Msa0797680:CDS | 40.0% |
| GCCCAATAAGCAAACATCTT+AGG | + | chr5_3:9920346-9920365 | None:intergenic | 40.0% | |
| TCATTGCAGCTTTCACAACT+GGG | + | chr5_3:9920375-9920394 | None:intergenic | 40.0% | |
| ATCATTGCAGCTTTCACAAC+TGG | + | chr5_3:9920376-9920395 | None:intergenic | 40.0% | |
| AGTTGTGAAAGCTGCAATGA+TGG | - | chr5_3:9920375-9920394 | Msa0797680:CDS | 40.0% | |
| AGGAAGCTTGAAATCCATGT+CGG | + | chr5_3:9920452-9920471 | None:intergenic | 40.0% | |
| TGATCCTTGTAACGTTTGAG+AGG | + | chr5_3:9920472-9920491 | None:intergenic | 40.0% | |
| !! | ATAACCTTGTTGTTCATGGC+TGG | - | chr5_3:9920491-9920510 | Msa0797680:CDS | 40.0% |
| CTCACTTGATCCATGAGAAA+CGG | - | chr5_3:9920515-9920534 | Msa0797680:CDS | 40.0% | |
| CATTAGATTTCATGGAGGCT+TGG | - | chr5_3:9920590-9920609 | Msa0797680:CDS | 40.0% | |
| ! | CTTCATAATCTGGGCTTTGT+GGG | + | chr5_3:9920627-9920646 | None:intergenic | 40.0% |
| TCTTCATAATCTGGGCTTTG+TGG | + | chr5_3:9920628-9920647 | None:intergenic | 40.0% | |
| AGCCCAGATTATGAAGAATG+GGG | - | chr5_3:9920631-9920650 | Msa0797680:CDS | 40.0% | |
| TCGCGATCGAGAAAGAAAAA+TGG | - | chr5_3:9920728-9920747 | Msa0797680:CDS | 40.0% | |
| CGCGATCGAGAAAGAAAAAT+GGG | - | chr5_3:9920729-9920748 | Msa0797680:CDS | 40.0% | |
| AGAAGGCGAATATTACTTCG+AGG | - | chr5_3:9920768-9920787 | Msa0797680:CDS | 40.0% | |
| GAAGGCGAATATTACTTCGA+GGG | - | chr5_3:9920769-9920788 | Msa0797680:CDS | 40.0% | |
| AAGGCGAATATTACTTCGAG+GGG | - | chr5_3:9920770-9920789 | Msa0797680:CDS | 40.0% | |
| CTGGTTATGGTAAAGGAAGT+TGG | - | chr5_3:9920938-9920957 | Msa0797680:CDS | 40.0% | |
| TCATCGTAGAATGTTTGGTC+TGG | + | chr5_3:9920076-9920095 | None:intergenic | 40.0% | |
| CAGGATCATCGTAGAATGTT+TGG | + | chr5_3:9920081-9920100 | None:intergenic | 40.0% | |
| GTCATGGTATACTCCATTTC+AGG | + | chr5_3:9920100-9920119 | None:intergenic | 40.0% | |
| ! | TTCATCCCAGTCGTCTATTT+TGG | + | chr5_3:9920125-9920144 | None:intergenic | 40.0% |
| !! | AGCAAAGGAAAGAGTGTTGA+TGG | - | chr5_3:9920189-9920208 | Msa0797680:CDS | 40.0% |
| TCACCTATTGGATTCTTGCA+CGG | + | chr5_3:9920235-9920254 | None:intergenic | 40.0% | |
| ! | GTGGATTACTCTCGTATTCA+TGG | - | chr5_3:9920286-9920305 | Msa0797680:CDS | 40.0% |
| GCCCAATAAGCAAACATCTT+AGG | + | chr5_3:9920346-9920365 | None:intergenic | 40.0% | |
| TCATTGCAGCTTTCACAACT+GGG | + | chr5_3:9920375-9920394 | None:intergenic | 40.0% | |
| ATCATTGCAGCTTTCACAAC+TGG | + | chr5_3:9920376-9920395 | None:intergenic | 40.0% | |
| AGTTGTGAAAGCTGCAATGA+TGG | - | chr5_3:9920375-9920394 | Msa0797680:CDS | 40.0% | |
| AGGAAGCTTGAAATCCATGT+CGG | + | chr5_3:9920452-9920471 | None:intergenic | 40.0% | |
| TGATCCTTGTAACGTTTGAG+AGG | + | chr5_3:9920472-9920491 | None:intergenic | 40.0% | |
| !! | ATAACCTTGTTGTTCATGGC+TGG | - | chr5_3:9920491-9920510 | Msa0797680:CDS | 40.0% |
| CTCACTTGATCCATGAGAAA+CGG | - | chr5_3:9920515-9920534 | Msa0797680:CDS | 40.0% | |
| CATTAGATTTCATGGAGGCT+TGG | - | chr5_3:9920590-9920609 | Msa0797680:CDS | 40.0% | |
| ! | CTTCATAATCTGGGCTTTGT+GGG | + | chr5_3:9920627-9920646 | None:intergenic | 40.0% |
| TCTTCATAATCTGGGCTTTG+TGG | + | chr5_3:9920628-9920647 | None:intergenic | 40.0% | |
| AGCCCAGATTATGAAGAATG+GGG | - | chr5_3:9920631-9920650 | Msa0797680:CDS | 40.0% | |
| TCGCGATCGAGAAAGAAAAA+TGG | - | chr5_3:9920728-9920747 | Msa0797680:CDS | 40.0% | |
| CGCGATCGAGAAAGAAAAAT+GGG | - | chr5_3:9920729-9920748 | Msa0797680:CDS | 40.0% | |
| AGAAGGCGAATATTACTTCG+AGG | - | chr5_3:9920768-9920787 | Msa0797680:CDS | 40.0% | |
| GAAGGCGAATATTACTTCGA+GGG | - | chr5_3:9920769-9920788 | Msa0797680:CDS | 40.0% | |
| AAGGCGAATATTACTTCGAG+GGG | - | chr5_3:9920770-9920789 | Msa0797680:CDS | 40.0% | |
| CTGGTTATGGTAAAGGAAGT+TGG | - | chr5_3:9920938-9920957 | Msa0797680:CDS | 40.0% | |
| TCTGATGGCTTTCTCTTCCT+TGG | - | chr5_3:9919914-9919933 | Msa0797680:CDS | 45.0% | |
| ! | TAAGGTTGTCGTTTGGGATG+GGG | + | chr5_3:9919991-9920010 | None:intergenic | 45.0% |
| ! | GTAAGGTTGTCGTTTGGGAT+GGG | + | chr5_3:9919992-9920011 | None:intergenic | 45.0% |
| TCGTAGAATGTTTGGTCTGG+TGG | + | chr5_3:9920073-9920092 | None:intergenic | 45.0% | |
| !!! | GTCGTCTATTTTGGTGGTCA+TGG | + | chr5_3:9920116-9920135 | None:intergenic | 45.0% |
| TGACCACCAAAATAGACGAC+TGG | - | chr5_3:9920116-9920135 | Msa0797680:CDS | 45.0% | |
| GACCACCAAAATAGACGACT+GGG | - | chr5_3:9920117-9920136 | Msa0797680:CDS | 45.0% | |
| !! | ATCCCAGTCGTCTATTTTGG+TGG | + | chr5_3:9920122-9920141 | None:intergenic | 45.0% |
| TTTGCTCCTGCAGAGAAAGA+CGG | + | chr5_3:9920175-9920194 | None:intergenic | 45.0% | |
| !! | GAAAGAGTGTTGATGGTCAC+TGG | - | chr5_3:9920196-9920215 | Msa0797680:CDS | 45.0% |
| ATTGGATTCTTGCACGGAGA+AGG | + | chr5_3:9920229-9920248 | None:intergenic | 45.0% | |
| TCTCCGTGCAAGAATCCAAT+AGG | - | chr5_3:9920229-9920248 | Msa0797680:CDS | 45.0% | |
| AGATGCATTGTTCACCGACA+TGG | - | chr5_3:9920435-9920454 | Msa0797680:CDS | 45.0% | |
| GCTTCCTCTCAAACGTTACA+AGG | - | chr5_3:9920465-9920484 | Msa0797680:CDS | 45.0% | |
| CGTTTCTCATGGATCAAGTG+AGG | + | chr5_3:9920517-9920536 | None:intergenic | 45.0% | |
| AAACACACCAGCGTTTAACC+CGG | + | chr5_3:9920548-9920567 | None:intergenic | 45.0% | |
| !! | ACGCTGGTGTGTTTTTGATC+AGG | - | chr5_3:9920554-9920573 | Msa0797680:CDS | 45.0% |
| AAGAATGGGGTAAGACTCTC+CGG | - | chr5_3:9920644-9920663 | Msa0797680:CDS | 45.0% | |
| TTTCTCGATCGCGATCAGAT+AGG | + | chr5_3:9920722-9920741 | None:intergenic | 45.0% | |
| !! | GGGTATTGGGAAGAGATAGT+AGG | - | chr5_3:9920790-9920809 | Msa0797680:CDS | 45.0% |
| GCATGACGCCTTCTTAACTT+AGG | + | chr5_3:9920865-9920884 | None:intergenic | 45.0% | |
| GAGAAAGTGAGTGAAGCTCA+TGG | - | chr5_3:9920886-9920905 | Msa0797680:CDS | 45.0% | |
| ACAGGTTGTCAACCTTGTAG+TGG | - | chr5_3:9920985-9921004 | Msa0797680:CDS | 45.0% | |
| CAGGTTGTCAACCTTGTAGT+GGG | - | chr5_3:9920986-9921005 | Msa0797680:CDS | 45.0% | |
| TGTACACTGCTGATGCTTGT+TGG | - | chr5_3:9921022-9921041 | Msa0797680:CDS | 45.0% | |
| ! | ACTGCTGATGCTTGTTGGAA+TGG | - | chr5_3:9921027-9921046 | Msa0797680:CDS | 45.0% |
| ! | CTGCTGATGCTTGTTGGAAT+GGG | - | chr5_3:9921028-9921047 | Msa0797680:CDS | 45.0% |
| TCTGATGGCTTTCTCTTCCT+TGG | - | chr5_3:9919914-9919933 | Msa0797680:CDS | 45.0% | |
| ! | TAAGGTTGTCGTTTGGGATG+GGG | + | chr5_3:9919991-9920010 | None:intergenic | 45.0% |
| ! | GTAAGGTTGTCGTTTGGGAT+GGG | + | chr5_3:9919992-9920011 | None:intergenic | 45.0% |
| TCGTAGAATGTTTGGTCTGG+TGG | + | chr5_3:9920073-9920092 | None:intergenic | 45.0% | |
| !!! | GTCGTCTATTTTGGTGGTCA+TGG | + | chr5_3:9920116-9920135 | None:intergenic | 45.0% |
| TGACCACCAAAATAGACGAC+TGG | - | chr5_3:9920116-9920135 | Msa0797680:CDS | 45.0% | |
| GACCACCAAAATAGACGACT+GGG | - | chr5_3:9920117-9920136 | Msa0797680:CDS | 45.0% | |
| !! | ATCCCAGTCGTCTATTTTGG+TGG | + | chr5_3:9920122-9920141 | None:intergenic | 45.0% |
| TTTGCTCCTGCAGAGAAAGA+CGG | + | chr5_3:9920175-9920194 | None:intergenic | 45.0% | |
| !! | GAAAGAGTGTTGATGGTCAC+TGG | - | chr5_3:9920196-9920215 | Msa0797680:CDS | 45.0% |
| ATTGGATTCTTGCACGGAGA+AGG | + | chr5_3:9920229-9920248 | None:intergenic | 45.0% | |
| TCTCCGTGCAAGAATCCAAT+AGG | - | chr5_3:9920229-9920248 | Msa0797680:CDS | 45.0% | |
| AGATGCATTGTTCACCGACA+TGG | - | chr5_3:9920435-9920454 | Msa0797680:CDS | 45.0% | |
| GCTTCCTCTCAAACGTTACA+AGG | - | chr5_3:9920465-9920484 | Msa0797680:CDS | 45.0% | |
| CGTTTCTCATGGATCAAGTG+AGG | + | chr5_3:9920517-9920536 | None:intergenic | 45.0% | |
| AAACACACCAGCGTTTAACC+CGG | + | chr5_3:9920548-9920567 | None:intergenic | 45.0% | |
| !! | ACGCTGGTGTGTTTTTGATC+AGG | - | chr5_3:9920554-9920573 | Msa0797680:CDS | 45.0% |
| AAGAATGGGGTAAGACTCTC+CGG | - | chr5_3:9920644-9920663 | Msa0797680:CDS | 45.0% | |
| TTTCTCGATCGCGATCAGAT+AGG | + | chr5_3:9920722-9920741 | None:intergenic | 45.0% | |
| !! | GGGTATTGGGAAGAGATAGT+AGG | - | chr5_3:9920790-9920809 | Msa0797680:CDS | 45.0% |
| GCATGACGCCTTCTTAACTT+AGG | + | chr5_3:9920865-9920884 | None:intergenic | 45.0% | |
| GAGAAAGTGAGTGAAGCTCA+TGG | - | chr5_3:9920886-9920905 | Msa0797680:CDS | 45.0% | |
| ACAGGTTGTCAACCTTGTAG+TGG | - | chr5_3:9920985-9921004 | Msa0797680:CDS | 45.0% | |
| CAGGTTGTCAACCTTGTAGT+GGG | - | chr5_3:9920986-9921005 | Msa0797680:CDS | 45.0% | |
| TGTACACTGCTGATGCTTGT+TGG | - | chr5_3:9921022-9921041 | Msa0797680:CDS | 45.0% | |
| ! | ACTGCTGATGCTTGTTGGAA+TGG | - | chr5_3:9921027-9921046 | Msa0797680:CDS | 45.0% |
| ! | CTGCTGATGCTTGTTGGAAT+GGG | - | chr5_3:9921028-9921047 | Msa0797680:CDS | 45.0% |
| GATGGCTTTCTCTTCCTTGG+AGG | - | chr5_3:9919917-9919936 | Msa0797680:CDS | 50.0% | |
| GAGCTGAAAATGCTCCTCCA+AGG | + | chr5_3:9919934-9919953 | None:intergenic | 50.0% | |
| ! | GTTTGGGATGGGGTTTGTGA+AGG | + | chr5_3:9919981-9920000 | None:intergenic | 50.0% |
| ! | GGTAAGGTTGTCGTTTGGGA+TGG | + | chr5_3:9919993-9920012 | None:intergenic | 50.0% |
| ! | TGGTGGATCAAAGCGCAGAT+CGG | + | chr5_3:9920056-9920075 | None:intergenic | 50.0% |
| CATCATCCGTCTTTCTCTGC+AGG | - | chr5_3:9920166-9920185 | Msa0797680:CDS | 50.0% | |
| GTCTTTCTCTGCAGGAGCAA+AGG | - | chr5_3:9920174-9920193 | Msa0797680:CDS | 50.0% | |
| ACCAGATCCACTCTGCTTCT+GGG | + | chr5_3:9920405-9920424 | None:intergenic | 50.0% | |
| AGAAGCAGAGTGGATCTGGT+GGG | - | chr5_3:9920405-9920424 | Msa0797680:CDS | 50.0% | |
| TGATCCATGAGAAACGGAGC+TGG | - | chr5_3:9920521-9920540 | Msa0797680:CDS | 50.0% | |
| GATGGCTTTCTCTTCCTTGG+AGG | - | chr5_3:9919917-9919936 | Msa0797680:CDS | 50.0% | |
| GAGCTGAAAATGCTCCTCCA+AGG | + | chr5_3:9919934-9919953 | None:intergenic | 50.0% | |
| ! | GTTTGGGATGGGGTTTGTGA+AGG | + | chr5_3:9919981-9920000 | None:intergenic | 50.0% |
| ! | GGTAAGGTTGTCGTTTGGGA+TGG | + | chr5_3:9919993-9920012 | None:intergenic | 50.0% |
| ! | TGGTGGATCAAAGCGCAGAT+CGG | + | chr5_3:9920056-9920075 | None:intergenic | 50.0% |
| CATCATCCGTCTTTCTCTGC+AGG | - | chr5_3:9920166-9920185 | Msa0797680:CDS | 50.0% | |
| GTCTTTCTCTGCAGGAGCAA+AGG | - | chr5_3:9920174-9920193 | Msa0797680:CDS | 50.0% | |
| ACCAGATCCACTCTGCTTCT+GGG | + | chr5_3:9920405-9920424 | None:intergenic | 50.0% | |
| AGAAGCAGAGTGGATCTGGT+GGG | - | chr5_3:9920405-9920424 | Msa0797680:CDS | 50.0% | |
| TGATCCATGAGAAACGGAGC+TGG | - | chr5_3:9920521-9920540 | Msa0797680:CDS | 50.0% | |
| ! | CGACTGGGATGAAAAGCGTG+AGG | - | chr5_3:9920132-9920151 | Msa0797680:CDS | 55.0% |
| ! | GGGATGAAAAGCGTGAGGAG+TGG | - | chr5_3:9920137-9920156 | Msa0797680:CDS | 55.0% |
| ACCCAGAAGCAGAGTGGATC+TGG | - | chr5_3:9920401-9920420 | Msa0797680:CDS | 55.0% | |
| CACCAGATCCACTCTGCTTC+TGG | + | chr5_3:9920406-9920425 | None:intergenic | 55.0% | |
| CAGAAGCAGAGTGGATCTGG+TGG | - | chr5_3:9920404-9920423 | Msa0797680:CDS | 55.0% | |
| GAGGCCAGCCATGAACAACA+AGG | + | chr5_3:9920498-9920517 | None:intergenic | 55.0% | |
| CATGAGAAACGGAGCTGGAC+CGG | - | chr5_3:9920526-9920545 | Msa0797680:CDS | 55.0% | |
| ATGAGAAACGGAGCTGGACC+GGG | - | chr5_3:9920527-9920546 | Msa0797680:CDS | 55.0% | |
| GATTTCATGGAGGCTTGGGC+TGG | - | chr5_3:9920595-9920614 | Msa0797680:CDS | 55.0% | |
| ! | ATGGAGGCTTGGGCTGGAAT+GGG | - | chr5_3:9920601-9920620 | Msa0797680:CDS | 55.0% |
| CCTGTCTGATCGTCTGACTC+GGG | + | chr5_3:9920694-9920713 | None:intergenic | 55.0% | |
| GCCTGTCTGATCGTCTGACT+CGG | + | chr5_3:9920695-9920714 | None:intergenic | 55.0% | |
| ! | CGACTGGGATGAAAAGCGTG+AGG | - | chr5_3:9920132-9920151 | Msa0797680:CDS | 55.0% |
| ! | GGGATGAAAAGCGTGAGGAG+TGG | - | chr5_3:9920137-9920156 | Msa0797680:CDS | 55.0% |
| ACCCAGAAGCAGAGTGGATC+TGG | - | chr5_3:9920401-9920420 | Msa0797680:CDS | 55.0% | |
| CACCAGATCCACTCTGCTTC+TGG | + | chr5_3:9920406-9920425 | None:intergenic | 55.0% | |
| CAGAAGCAGAGTGGATCTGG+TGG | - | chr5_3:9920404-9920423 | Msa0797680:CDS | 55.0% | |
| GAGGCCAGCCATGAACAACA+AGG | + | chr5_3:9920498-9920517 | None:intergenic | 55.0% | |
| CATGAGAAACGGAGCTGGAC+CGG | - | chr5_3:9920526-9920545 | Msa0797680:CDS | 55.0% | |
| ATGAGAAACGGAGCTGGACC+GGG | - | chr5_3:9920527-9920546 | Msa0797680:CDS | 55.0% | |
| GATTTCATGGAGGCTTGGGC+TGG | - | chr5_3:9920595-9920614 | Msa0797680:CDS | 55.0% | |
| ! | ATGGAGGCTTGGGCTGGAAT+GGG | - | chr5_3:9920601-9920620 | Msa0797680:CDS | 55.0% |
| CCTGTCTGATCGTCTGACTC+GGG | + | chr5_3:9920694-9920713 | None:intergenic | 55.0% | |
| GCCTGTCTGATCGTCTGACT+CGG | + | chr5_3:9920695-9920714 | None:intergenic | 55.0% | |
| TGGCACACCCAGAAGCAGAG+TGG | - | chr5_3:9920395-9920414 | Msa0797680:CDS | 60.0% | |
| CGGTCCAGCTCCGTTTCTCA+TGG | + | chr5_3:9920528-9920547 | None:intergenic | 60.0% | |
| AGCTGGACCGGGTTAAACGC+TGG | - | chr5_3:9920538-9920557 | Msa0797680:CDS | 60.0% | |
| ! | CATGGAGGCTTGGGCTGGAA+TGG | - | chr5_3:9920600-9920619 | Msa0797680:CDS | 60.0% |
| CCCGAGTCAGACGATCAGAC+AGG | - | chr5_3:9920691-9920710 | Msa0797680:CDS | 60.0% | |
| TGGCACACCCAGAAGCAGAG+TGG | - | chr5_3:9920395-9920414 | Msa0797680:CDS | 60.0% | |
| CGGTCCAGCTCCGTTTCTCA+TGG | + | chr5_3:9920528-9920547 | None:intergenic | 60.0% | |
| AGCTGGACCGGGTTAAACGC+TGG | - | chr5_3:9920538-9920557 | Msa0797680:CDS | 60.0% | |
| ! | CATGGAGGCTTGGGCTGGAA+TGG | - | chr5_3:9920600-9920619 | Msa0797680:CDS | 60.0% |
| CCCGAGTCAGACGATCAGAC+AGG | - | chr5_3:9920691-9920710 | Msa0797680:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 9919869 | 9921167 | 9919869 | ID=Msa0797680;Name=Msa0797680 |
| chr5_3 | mRNA | 9919869 | 9921167 | 9919869 | ID=Msa0797680-mRNA-1;Parent=Msa0797680;Name=Msa0797680-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|432 |
| chr5_3 | exon | 9919869 | 9921167 | 9919869 | ID=Msa0797680-mRNA-1:exon:4267;Parent=Msa0797680-mRNA-1 |
| chr5_3 | CDS | 9919869 | 9921167 | 9919869 | ID=Msa0797680-mRNA-1:cds;Parent=Msa0797680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
