Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0835160 | XP_003611556.1 | 97.528 | 445 | 11 | 0 | 1 | 445 | 1 | 445 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0835160 | sp|Q564G7|GMGT1_CYATE | 63.409 | 440 | 144 | 4 | 15 | 444 | 1 | 433 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0835160 | G7K2G3 | 97.528 | 445 | 11 | 0 | 1 | 445 | 1 | 445 | 0.0 | 910 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025160 | Msa0835160 | 0.811776 | 5.912199e-51 | -8.615850e-47 |
| Msa0050660 | Msa0835160 | 0.812335 | 4.465336e-51 | -8.615850e-47 |
| Msa0050700 | Msa0835160 | 0.811790 | 5.869902e-51 | -8.615850e-47 |
| Msa0050790 | Msa0835160 | 0.804833 | 1.786872e-49 | -8.615850e-47 |
| Msa0611110 | Msa0835160 | 0.835242 | 1.880506e-56 | -8.615850e-47 |
| Msa0644410 | Msa0835160 | 0.808770 | 2.630339e-50 | -8.615850e-47 |
| Msa0675330 | Msa0835160 | 0.829751 | 4.319590e-55 | -8.615850e-47 |
| Msa0687090 | Msa0835160 | 0.825515 | 4.495470e-54 | -8.615850e-47 |
| Msa0713700 | Msa0835160 | 0.889667 | 1.973175e-73 | -8.615850e-47 |
| Msa0736890 | Msa0835160 | 0.801321 | 9.515663e-49 | -8.615850e-47 |
| Msa0797680 | Msa0835160 | 0.809148 | 2.183437e-50 | -8.615850e-47 |
| Msa0835160 | Msa1042160 | 0.827756 | 1.312194e-54 | -8.615850e-47 |
| Msa0835160 | Msa1042190 | 0.828903 | 6.941366e-55 | -8.615850e-47 |
| Msa0835160 | Msa1080000 | 0.806241 | 9.050762e-50 | -8.615850e-47 |
| Msa0835160 | Msa1123210 | 0.800049 | 1.729456e-48 | -8.615850e-47 |
| Msa0835160 | Msa1167470 | 0.827608 | 1.424329e-54 | -8.615850e-47 |
| Msa0835160 | Msa1393780 | 0.817774 | 2.770474e-52 | -8.615850e-47 |
| Msa0835160 | Msa1440630 | 0.801548 | 8.549521e-49 | -8.615850e-47 |
| Msa0128310 | Msa0835160 | 0.813127 | 2.995008e-51 | -8.615850e-47 |
| Msa0174440 | Msa0835160 | 0.809708 | 1.655787e-50 | -8.615850e-47 |
| Msa0517250 | Msa0835160 | 0.811639 | 6.332305e-51 | -8.615850e-47 |
| Msa0541300 | Msa0835160 | 0.835103 | 2.039166e-56 | -8.615850e-47 |
| Msa0541310 | Msa0835160 | 0.833246 | 5.953519e-56 | -8.615850e-47 |
| Msa0585020 | Msa0835160 | 0.828810 | 7.307718e-55 | -8.615850e-47 |
| Msa0597270 | Msa0835160 | 0.833482 | 5.200662e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0835160 | MtrunA17_Chr5g0401011 | 97.528 | 445 | 11 | 0 | 1 | 445 | 1 | 445 | 0.0 | 910 |
| Msa0835160 | MtrunA17_Chr4g0054201 | 63.087 | 447 | 152 | 4 | 8 | 446 | 442 | 883 | 0.0 | 590 |
| Msa0835160 | MtrunA17_Chr4g0054201 | 58.286 | 350 | 137 | 2 | 81 | 427 | 60 | 403 | 1.83e-151 | 452 |
| Msa0835160 | MtrunA17_Chr4g0061061 | 47.143 | 350 | 145 | 7 | 85 | 431 | 100 | 412 | 5.02e-111 | 334 |
| Msa0835160 | MtrunA17_Chr4g0067341 | 44.809 | 366 | 158 | 7 | 90 | 446 | 107 | 437 | 6.38e-111 | 334 |
| Msa0835160 | MtrunA17_Chr7g0269221 | 45.115 | 348 | 153 | 6 | 95 | 439 | 124 | 436 | 6.06e-109 | 330 |
| Msa0835160 | MtrunA17_Chr3g0091621 | 40.662 | 423 | 202 | 10 | 19 | 431 | 34 | 417 | 2.79e-106 | 322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0835160 | AT2G22900.1 | 62.584 | 449 | 163 | 4 | 1 | 446 | 1 | 447 | 0.0 | 573 |
| Msa0835160 | AT4G37690.1 | 60.369 | 434 | 166 | 3 | 15 | 446 | 1 | 430 | 0.0 | 555 |
| Msa0835160 | AT5G07720.1 | 40.460 | 435 | 213 | 7 | 6 | 431 | 24 | 421 | 4.84e-115 | 345 |
| Msa0835160 | AT3G62720.2 | 47.246 | 345 | 144 | 6 | 95 | 436 | 117 | 426 | 9.71e-112 | 337 |
| Msa0835160 | AT3G62720.1 | 47.246 | 345 | 144 | 6 | 95 | 436 | 117 | 426 | 9.71e-112 | 337 |
| Msa0835160 | AT1G18690.3 | 43.767 | 377 | 173 | 6 | 57 | 431 | 141 | 480 | 1.19e-110 | 336 |
| Msa0835160 | AT1G18690.4 | 43.767 | 377 | 173 | 6 | 57 | 431 | 141 | 480 | 1.19e-110 | 336 |
| Msa0835160 | AT1G18690.2 | 43.767 | 377 | 173 | 6 | 57 | 431 | 141 | 480 | 1.19e-110 | 336 |
| Msa0835160 | AT1G18690.1 | 43.767 | 377 | 173 | 6 | 57 | 431 | 141 | 480 | 1.19e-110 | 336 |
| Msa0835160 | AT1G74380.1 | 45.349 | 344 | 151 | 5 | 90 | 431 | 114 | 422 | 9.37e-110 | 332 |
| Msa0835160 | AT4G02500.1 | 43.909 | 353 | 160 | 4 | 90 | 439 | 113 | 430 | 2.36e-108 | 328 |
| Msa0835160 | AT4G38310.1 | 69.231 | 117 | 35 | 1 | 78 | 193 | 1 | 117 | 4.39e-55 | 179 |
Find 108 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAAGTTATTCGTAAATT+TGG | 0.144278 | 5_4:+8458444 | Msa0835160:CDS |
| TCCTAAGATGTTTGCTTATT+GGG | 0.175052 | 5_4:+8457708 | Msa0835160:CDS |
| TTCATCCCAGTCGTCTATTT+TGG | 0.194915 | 5_4:-8457488 | None:intergenic |
| ATCCTAAGATGTTTGCTTAT+TGG | 0.207679 | 5_4:+8457707 | Msa0835160:CDS |
| TATAGAAGAAGATTTGTTTC+TGG | 0.226424 | 5_4:-8457251 | None:intergenic |
| CACCAGATCCACTCTGCTTC+TGG | 0.247207 | 5_4:-8457769 | None:intergenic |
| TTACCCCATTCTTCATAATC+TGG | 0.296788 | 5_4:-8458000 | None:intergenic |
| GTCATGGTATACTCCATTTC+AGG | 0.314443 | 5_4:-8457463 | None:intergenic |
| ATAGAAGAAGATTTGTTTCT+GGG | 0.318466 | 5_4:-8457250 | None:intergenic |
| ATGGAGGCTTGGGCTGGAAT+GGG | 0.324947 | 5_4:+8457967 | Msa0835160:CDS |
| CATGGAGGCTTGGGCTGGAA+TGG | 0.334539 | 5_4:+8457966 | Msa0835160:CDS |
| GCCCAATAAGCAAACATCTT+AGG | 0.336434 | 5_4:-8457709 | None:intergenic |
| TTAAGGTGAGGTTGTCGTTT+GGG | 0.336884 | 5_4:-8457360 | None:intergenic |
| AATATTACTTCGAGGGGTAT+TGG | 0.338476 | 5_4:+8458142 | Msa0835160:CDS |
| GTGGATTACTCTCGTATTCA+TGG | 0.344402 | 5_4:+8457652 | Msa0835160:CDS |
| TCTGATGGCTTCCTCTTCCT+TGG | 0.345544 | 5_4:+8457280 | Msa0835160:CDS |
| TCAATGGTCATTAGATTTCA+TGG | 0.346153 | 5_4:+8457948 | Msa0835160:CDS |
| CAGGATCATCGTAGAATGTT+TGG | 0.347067 | 5_4:-8457444 | None:intergenic |
| AACAACAAATGGTCACCTAT+TGG | 0.350530 | 5_4:-8457610 | None:intergenic |
| GTGAGGTTGTCGTTTGGGAT+GGG | 0.352772 | 5_4:-8457355 | None:intergenic |
| TCTTCATAATCTGGGCTTTG+TGG | 0.354799 | 5_4:-8457991 | None:intergenic |
| GATCATAACCTTGTTGTTCA+TGG | 0.356395 | 5_4:+8457853 | Msa0835160:CDS |
| ATCATTGCAGCTTTCACAAC+AGG | 0.362566 | 5_4:-8457739 | None:intergenic |
| ATTAGATTTCATGGAGGCTT+GGG | 0.362925 | 5_4:+8457957 | Msa0835160:CDS |
| CATGAGAAACGGAGCTGGAC+TGG | 0.370520 | 5_4:+8457892 | Msa0835160:CDS |
| ATATTACTTCGAGGGGTATT+GGG | 0.374107 | 5_4:+8458143 | Msa0835160:CDS |
| CATAAAGATCTTGGGGATAA+TGG | 0.376635 | 5_4:+8458474 | Msa0835160:CDS |
| CATTAGATTTCATGGAGGCT+TGG | 0.381012 | 5_4:+8457956 | Msa0835160:CDS |
| GGTGAGGTTGTCGTTTGGGA+TGG | 0.382979 | 5_4:-8457356 | None:intergenic |
| GAAGATTTGTTTCTGGGAAT+GGG | 0.385239 | 5_4:-8457244 | None:intergenic |
| TATTTGAAAGATGCTGGTTA+TGG | 0.388530 | 5_4:+8458291 | Msa0835160:CDS |
| AGAAGATTTGTTTCTGGGAA+TGG | 0.391546 | 5_4:-8457245 | None:intergenic |
| TGAAGAATCTTAACAACAAA+TGG | 0.394171 | 5_4:-8457621 | None:intergenic |
| CTGGTTATGGTAAAGGAAGT+TGG | 0.399264 | 5_4:+8458304 | Msa0835160:CDS |
| TGAGGTTGTCGTTTGGGATG+GGG | 0.405083 | 5_4:-8457354 | None:intergenic |
| TGTACACTGCTGATGCTTGT+TGG | 0.406742 | 5_4:+8458388 | Msa0835160:CDS |
| GAAGAGTATTTGAAAGATGC+TGG | 0.407850 | 5_4:+8458285 | Msa0835160:CDS |
| CTTCATAATCTGGGCTTTGT+GGG | 0.412052 | 5_4:-8457990 | None:intergenic |
| TCTTCTATATTTCTCTCTGA+TGG | 0.418803 | 5_4:+8457265 | Msa0835160:CDS |
| ATCCAGAAGCAGAGTGGATC+TGG | 0.420997 | 5_4:+8457767 | Msa0835160:CDS |
| TTTAAGGTGAGGTTGTCGTT+TGG | 0.424610 | 5_4:-8457361 | None:intergenic |
| GATGGCTTCCTCTTCCTTGG+AGG | 0.432600 | 5_4:+8457283 | Msa0835160:CDS |
| TACCCCATTCTTCATAATCT+GGG | 0.433806 | 5_4:-8457999 | None:intergenic |
| AGCAAAGGAAAGAGTGTTGA+TGG | 0.438346 | 5_4:+8457555 | Msa0835160:CDS |
| ATAACCTTGTTGTTCATGGC+TGG | 0.442241 | 5_4:+8457857 | Msa0835160:CDS |
| AAAGATGCTGGTTATGGTAA+AGG | 0.444724 | 5_4:+8458297 | Msa0835160:CDS |
| GATTTCATGGAGGCTTGGGC+TGG | 0.447837 | 5_4:+8457961 | Msa0835160:CDS |
| AAGCCCAGATTATGAAGAAT+GGG | 0.454167 | 5_4:+8457996 | Msa0835160:CDS |
| ATTCTACGATGATCCTGAAA+TGG | 0.454311 | 5_4:+8457450 | Msa0835160:CDS |
| GGTGGATCAAAGCGCAGATC+GGG | 0.455974 | 5_4:-8457418 | None:intergenic |
| ACTGCTGATGCTTGTTGGAA+TGG | 0.456658 | 5_4:+8458393 | Msa0835160:CDS |
| TTTCTCGATCGCGATCAGAT+AGG | 0.459063 | 5_4:-8458085 | None:intergenic |
| CCTGTAAAATGTGTAACAAA+TGG | 0.462913 | 5_4:-8458333 | None:intergenic |
| CTGCTGATGCTTGTTGGAAT+GGG | 0.463785 | 5_4:+8458394 | Msa0835160:CDS |
| CATCATCCGTCTTTCTCTGC+AGG | 0.478033 | 5_4:+8457532 | Msa0835160:CDS |
| TCTCCGTGCAAGAATCCAAT+AGG | 0.480437 | 5_4:+8457595 | Msa0835160:CDS |
| GCCTGTCTGATCGTCTGACT+CGG | 0.492017 | 5_4:-8458058 | None:intergenic |
| AAGAATGGGGTAAGATTCTC+CGG | 0.493384 | 5_4:+8458010 | Msa0835160:CDS |
| GAAAGAGTGTTGATGGTCAC+TGG | 0.495025 | 5_4:+8457562 | Msa0835160:CDS |
| TCATTATACTTCCCACTACA+AGG | 0.496339 | 5_4:-8458363 | None:intergenic |
| GCATGACGCCTTCTTAACTT+AGG | 0.496571 | 5_4:-8458228 | None:intergenic |
| CTCACTTGATCCATGAGAAA+CGG | 0.497365 | 5_4:+8457881 | Msa0835160:CDS |
| ATTTATCTTTAAAAGTTGAC+CGG | 0.498543 | 5_4:-8458029 | None:intergenic |
| AAAGCCCAGATTATGAAGAA+TGG | 0.499353 | 5_4:+8457995 | Msa0835160:CDS |
| CAGTCCAGCTCCGTTTCTCA+TGG | 0.499397 | 5_4:-8457891 | None:intergenic |
| ATGAGAAACGGAGCTGGACT+GGG | 0.501194 | 5_4:+8457893 | Msa0835160:CDS |
| ATTGGATTCTTGCACGGAGA+AGG | 0.509563 | 5_4:-8457592 | None:intergenic |
| GCTTCCTCTCAAACGTTACA+AGG | 0.512911 | 5_4:+8457831 | Msa0835160:CDS |
| TCGTAGAATGTTTGGTCTGG+TGG | 0.513684 | 5_4:-8457436 | None:intergenic |
| AGATGCATTGTTCACCGACA+TGG | 0.516301 | 5_4:+8457801 | Msa0835160:CDS |
| GCTGACAAGATTTATCTAGA+AGG | 0.520122 | 5_4:+8458117 | Msa0835160:CDS |
| CATTCTTGAGGATAATCAAA+AGG | 0.522976 | 5_4:-8458510 | None:intergenic |
| CCCGAGTCAGACGATCAGAC+AGG | 0.525329 | 5_4:+8458057 | Msa0835160:CDS |
| TCATCGTAGAATGTTTGGTC+TGG | 0.529616 | 5_4:-8457439 | None:intergenic |
| TGACCACCAAAATAGACGAC+TGG | 0.534163 | 5_4:+8457482 | Msa0835160:CDS |
| GGGTATTGGGAAGAGATAGT+AGG | 0.535734 | 5_4:+8458156 | Msa0835160:CDS |
| GTCTTTCTCTGCAGGAGCAA+AGG | 0.536163 | 5_4:+8457540 | Msa0835160:CDS |
| AAAATGCTCCTCCAAGGAAG+AGG | 0.536323 | 5_4:-8457291 | None:intergenic |
| TGATCCATGAGAAACGGAGC+TGG | 0.538704 | 5_4:+8457887 | Msa0835160:CDS |
| GTTTGGGATGGGGTTTGTGA+AGG | 0.539018 | 5_4:-8457344 | None:intergenic |
| TTTGCTCCTGCAGAGAAAGA+CGG | 0.551182 | 5_4:-8457538 | None:intergenic |
| TGTTGTGAAAGCTGCAATGA+TGG | 0.556012 | 5_4:+8457741 | Msa0835160:CDS |
| TGGTGGATCAAAGCGCAGAT+CGG | 0.556690 | 5_4:-8457419 | None:intergenic |
| ACAGGTTGTCAACCTTGTAG+TGG | 0.558357 | 5_4:+8458351 | Msa0835160:CDS |
| AAGTTGAGCCTAAGTTAAGA+AGG | 0.567104 | 5_4:+8458220 | Msa0835160:CDS |
| CCTGTCTGATCGTCTGACTC+GGG | 0.569637 | 5_4:-8458057 | None:intergenic |
| CAGGTTGTCAACCTTGTAGT+GGG | 0.588604 | 5_4:+8458352 | Msa0835160:CDS |
| ATGAAGCATAATCATTCTTG+AGG | 0.588958 | 5_4:-8458522 | None:intergenic |
| GAGCTGAAAATGCTCCTCCA+AGG | 0.589197 | 5_4:-8457297 | None:intergenic |
| GAAGGCGAATATTACTTCGA+GGG | 0.591672 | 5_4:+8458135 | Msa0835160:CDS |
| AGAAGGCGAATATTACTTCG+AGG | 0.599202 | 5_4:+8458134 | Msa0835160:CDS |
| TGATCCTTGTAACGTTTGAG+AGG | 0.599914 | 5_4:-8457835 | None:intergenic |
| TCACCTATTGGATTCTTGCA+CGG | 0.608907 | 5_4:-8457598 | None:intergenic |
| GACCACCAAAATAGACGACT+GGG | 0.610284 | 5_4:+8457483 | Msa0835160:CDS |
| CAGAAGCAGAGTGGATCTGG+TGG | 0.614112 | 5_4:+8457770 | Msa0835160:CDS |
| AGCTGGACTGGGTTAAACGC+TGG | 0.635344 | 5_4:+8457904 | Msa0835160:CDS |
| TCATTGCAGCTTTCACAACA+GGG | 0.636937 | 5_4:-8457738 | None:intergenic |
| CGTTTCTCATGGATCAAGTG+AGG | 0.643998 | 5_4:-8457880 | None:intergenic |
| AAGGCGAATATTACTTCGAG+GGG | 0.647787 | 5_4:+8458136 | Msa0835160:CDS |
| AGGAAGCTTGAAATCCATGT+CGG | 0.666037 | 5_4:-8457815 | None:intergenic |
| GGGATGAAAAGCGTGAGGAG+TGG | 0.666595 | 5_4:+8457503 | Msa0835160:CDS |
| AGAAGCAGAGTGGATCTGGT+GGG | 0.667841 | 5_4:+8457771 | Msa0835160:CDS |
| AGCCCAGATTATGAAGAATG+GGG | 0.678392 | 5_4:+8457997 | Msa0835160:CDS |
| CGACTGGGATGAAAAGCGTG+AGG | 0.682004 | 5_4:+8457498 | Msa0835160:CDS |
| GAGGCCAGCCATGAACAACA+AGG | 0.700083 | 5_4:-8457861 | None:intergenic |
| TGGCACATCCAGAAGCAGAG+TGG | 0.700260 | 5_4:+8457761 | Msa0835160:CDS |
| GAGAAAGTGAGTGAAGCTCA+TGG | 0.705834 | 5_4:+8458252 | Msa0835160:CDS |
| ATGGTCATTAGATTTCATGG+AGG | 0.731958 | 5_4:+8457951 | Msa0835160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATTCTTCAAAAATAAAG+TGG | + | chr5_4:8457633-8457652 | Msa0835160:CDS | 20.0% |
| !!! | ATTTATCTTTAAAAGTTGAC+CGG | - | chr5_4:8458032-8458051 | None:intergenic | 20.0% |
| !! | AATCAAGTTATTCGTAAATT+TGG | + | chr5_4:8458444-8458463 | Msa0835160:CDS | 20.0% |
| !! | AAGATTCTTCAAAAATAAAG+TGG | + | chr5_4:8457633-8457652 | Msa0835160:CDS | 20.0% |
| !!! | ATTTATCTTTAAAAGTTGAC+CGG | - | chr5_4:8458032-8458051 | None:intergenic | 20.0% |
| !! | AATCAAGTTATTCGTAAATT+TGG | + | chr5_4:8458444-8458463 | Msa0835160:CDS | 20.0% |
| !! | ATAGAAGAAGATTTGTTTCT+GGG | - | chr5_4:8457253-8457272 | None:intergenic | 25.0% |
| !! | TATAGAAGAAGATTTGTTTC+TGG | - | chr5_4:8457254-8457273 | None:intergenic | 25.0% |
| ! | TGAAGAATCTTAACAACAAA+TGG | - | chr5_4:8457624-8457643 | None:intergenic | 25.0% |
| !! | ATAGAAGAAGATTTGTTTCT+GGG | - | chr5_4:8457253-8457272 | None:intergenic | 25.0% |
| !! | TATAGAAGAAGATTTGTTTC+TGG | - | chr5_4:8457254-8457273 | None:intergenic | 25.0% |
| ! | TGAAGAATCTTAACAACAAA+TGG | - | chr5_4:8457624-8457643 | None:intergenic | 25.0% |
| TCTTCTATATTTCTCTCTGA+TGG | + | chr5_4:8457265-8457284 | Msa0835160:CDS | 30.0% | |
| ! | TTTCAGCTCTTTTACTTGTT+TGG | + | chr5_4:8457311-8457330 | Msa0835160:CDS | 30.0% |
| ! | TTCAGCTCTTTTACTTGTTT+GGG | + | chr5_4:8457312-8457331 | Msa0835160:CDS | 30.0% |
| !!! | GTTGTTTTTGTGAGGTTTTA+AGG | - | chr5_4:8457380-8457399 | None:intergenic | 30.0% |
| ATCCTAAGATGTTTGCTTAT+TGG | + | chr5_4:8457707-8457726 | Msa0835160:CDS | 30.0% | |
| TCCTAAGATGTTTGCTTATT+GGG | + | chr5_4:8457708-8457727 | Msa0835160:CDS | 30.0% | |
| TCAATGGTCATTAGATTTCA+TGG | + | chr5_4:8457948-8457967 | Msa0835160:CDS | 30.0% | |
| ! | TATTTGAAAGATGCTGGTTA+TGG | + | chr5_4:8458291-8458310 | Msa0835160:CDS | 30.0% |
| CCTGTAAAATGTGTAACAAA+TGG | - | chr5_4:8458336-8458355 | None:intergenic | 30.0% | |
| !! | CCATTTGTTACACATTTTAC+AGG | + | chr5_4:8458333-8458352 | Msa0835160:CDS | 30.0% |
| ! | GTTTTGTGCATAAAGATCTT+GGG | + | chr5_4:8458466-8458485 | Msa0835160:CDS | 30.0% |
| ! | TTTTGTGCATAAAGATCTTG+GGG | + | chr5_4:8458467-8458486 | Msa0835160:CDS | 30.0% |
| CATTCTTGAGGATAATCAAA+AGG | - | chr5_4:8458513-8458532 | None:intergenic | 30.0% | |
| TCTTCTATATTTCTCTCTGA+TGG | + | chr5_4:8457265-8457284 | Msa0835160:CDS | 30.0% | |
| ! | TTTCAGCTCTTTTACTTGTT+TGG | + | chr5_4:8457311-8457330 | Msa0835160:CDS | 30.0% |
| ! | TTCAGCTCTTTTACTTGTTT+GGG | + | chr5_4:8457312-8457331 | Msa0835160:CDS | 30.0% |
| !!! | GTTGTTTTTGTGAGGTTTTA+AGG | - | chr5_4:8457380-8457399 | None:intergenic | 30.0% |
| ATCCTAAGATGTTTGCTTAT+TGG | + | chr5_4:8457707-8457726 | Msa0835160:CDS | 30.0% | |
| TCCTAAGATGTTTGCTTATT+GGG | + | chr5_4:8457708-8457727 | Msa0835160:CDS | 30.0% | |
| TCAATGGTCATTAGATTTCA+TGG | + | chr5_4:8457948-8457967 | Msa0835160:CDS | 30.0% | |
| ! | TATTTGAAAGATGCTGGTTA+TGG | + | chr5_4:8458291-8458310 | Msa0835160:CDS | 30.0% |
| CCTGTAAAATGTGTAACAAA+TGG | - | chr5_4:8458336-8458355 | None:intergenic | 30.0% | |
| !! | CCATTTGTTACACATTTTAC+AGG | + | chr5_4:8458333-8458352 | Msa0835160:CDS | 30.0% |
| ! | GTTTTGTGCATAAAGATCTT+GGG | + | chr5_4:8458466-8458485 | Msa0835160:CDS | 30.0% |
| ! | TTTTGTGCATAAAGATCTTG+GGG | + | chr5_4:8458467-8458486 | Msa0835160:CDS | 30.0% |
| CATTCTTGAGGATAATCAAA+AGG | - | chr5_4:8458513-8458532 | None:intergenic | 30.0% | |
| !! | GAAGATTTGTTTCTGGGAAT+GGG | - | chr5_4:8457247-8457266 | None:intergenic | 35.0% |
| !! | AGAAGATTTGTTTCTGGGAA+TGG | - | chr5_4:8457248-8457267 | None:intergenic | 35.0% |
| ! | TCAGCTCTTTTACTTGTTTG+GGG | + | chr5_4:8457313-8457332 | Msa0835160:CDS | 35.0% |
| !!! | TTTTGTGAGGTTTTAAGGTG+AGG | - | chr5_4:8457375-8457394 | None:intergenic | 35.0% |
| !!! | GAAACAACGTTGTTTTTGTG+AGG | - | chr5_4:8457388-8457407 | None:intergenic | 35.0% |
| ATTCTACGATGATCCTGAAA+TGG | + | chr5_4:8457450-8457469 | Msa0835160:CDS | 35.0% | |
| AACAACAAATGGTCACCTAT+TGG | - | chr5_4:8457613-8457632 | None:intergenic | 35.0% | |
| !! | GATCATAACCTTGTTGTTCA+TGG | + | chr5_4:8457853-8457872 | Msa0835160:CDS | 35.0% |
| ! | TTTTGATCAGGAACTGTCAA+TGG | + | chr5_4:8457932-8457951 | Msa0835160:CDS | 35.0% |
| ATGGTCATTAGATTTCATGG+AGG | + | chr5_4:8457951-8457970 | Msa0835160:CDS | 35.0% | |
| ATTAGATTTCATGGAGGCTT+GGG | + | chr5_4:8457957-8457976 | Msa0835160:CDS | 35.0% | |
| AAAGCCCAGATTATGAAGAA+TGG | + | chr5_4:8457995-8458014 | Msa0835160:CDS | 35.0% | |
| AAGCCCAGATTATGAAGAAT+GGG | + | chr5_4:8457996-8458015 | Msa0835160:CDS | 35.0% | |
| TACCCCATTCTTCATAATCT+GGG | - | chr5_4:8458002-8458021 | None:intergenic | 35.0% | |
| TTACCCCATTCTTCATAATC+TGG | - | chr5_4:8458003-8458022 | None:intergenic | 35.0% | |
| GCTGACAAGATTTATCTAGA+AGG | + | chr5_4:8458117-8458136 | Msa0835160:CDS | 35.0% | |
| ! | AATATTACTTCGAGGGGTAT+TGG | + | chr5_4:8458142-8458161 | Msa0835160:CDS | 35.0% |
| !! | ATATTACTTCGAGGGGTATT+GGG | + | chr5_4:8458143-8458162 | Msa0835160:CDS | 35.0% |
| AAGTTGAGCCTAAGTTAAGA+AGG | + | chr5_4:8458220-8458239 | Msa0835160:CDS | 35.0% | |
| !! | GAAGAGTATTTGAAAGATGC+TGG | + | chr5_4:8458285-8458304 | Msa0835160:CDS | 35.0% |
| ! | AAAGATGCTGGTTATGGTAA+AGG | + | chr5_4:8458297-8458316 | Msa0835160:CDS | 35.0% |
| TCATTATACTTCCCACTACA+AGG | - | chr5_4:8458366-8458385 | None:intergenic | 35.0% | |
| !! | GGTTTTGTGCATAAAGATCT+TGG | + | chr5_4:8458465-8458484 | Msa0835160:CDS | 35.0% |
| CATAAAGATCTTGGGGATAA+TGG | + | chr5_4:8458474-8458493 | Msa0835160:CDS | 35.0% | |
| !! | GAAGATTTGTTTCTGGGAAT+GGG | - | chr5_4:8457247-8457266 | None:intergenic | 35.0% |
| !! | AGAAGATTTGTTTCTGGGAA+TGG | - | chr5_4:8457248-8457267 | None:intergenic | 35.0% |
| ! | TCAGCTCTTTTACTTGTTTG+GGG | + | chr5_4:8457313-8457332 | Msa0835160:CDS | 35.0% |
| !!! | TTTTGTGAGGTTTTAAGGTG+AGG | - | chr5_4:8457375-8457394 | None:intergenic | 35.0% |
| !!! | GAAACAACGTTGTTTTTGTG+AGG | - | chr5_4:8457388-8457407 | None:intergenic | 35.0% |
| ATTCTACGATGATCCTGAAA+TGG | + | chr5_4:8457450-8457469 | Msa0835160:CDS | 35.0% | |
| AACAACAAATGGTCACCTAT+TGG | - | chr5_4:8457613-8457632 | None:intergenic | 35.0% | |
| !! | GATCATAACCTTGTTGTTCA+TGG | + | chr5_4:8457853-8457872 | Msa0835160:CDS | 35.0% |
| ! | TTTTGATCAGGAACTGTCAA+TGG | + | chr5_4:8457932-8457951 | Msa0835160:CDS | 35.0% |
| ATGGTCATTAGATTTCATGG+AGG | + | chr5_4:8457951-8457970 | Msa0835160:CDS | 35.0% | |
| ATTAGATTTCATGGAGGCTT+GGG | + | chr5_4:8457957-8457976 | Msa0835160:CDS | 35.0% | |
| AAAGCCCAGATTATGAAGAA+TGG | + | chr5_4:8457995-8458014 | Msa0835160:CDS | 35.0% | |
| AAGCCCAGATTATGAAGAAT+GGG | + | chr5_4:8457996-8458015 | Msa0835160:CDS | 35.0% | |
| TACCCCATTCTTCATAATCT+GGG | - | chr5_4:8458002-8458021 | None:intergenic | 35.0% | |
| TTACCCCATTCTTCATAATC+TGG | - | chr5_4:8458003-8458022 | None:intergenic | 35.0% | |
| GCTGACAAGATTTATCTAGA+AGG | + | chr5_4:8458117-8458136 | Msa0835160:CDS | 35.0% | |
| ! | AATATTACTTCGAGGGGTAT+TGG | + | chr5_4:8458142-8458161 | Msa0835160:CDS | 35.0% |
| !! | ATATTACTTCGAGGGGTATT+GGG | + | chr5_4:8458143-8458162 | Msa0835160:CDS | 35.0% |
| AAGTTGAGCCTAAGTTAAGA+AGG | + | chr5_4:8458220-8458239 | Msa0835160:CDS | 35.0% | |
| !! | GAAGAGTATTTGAAAGATGC+TGG | + | chr5_4:8458285-8458304 | Msa0835160:CDS | 35.0% |
| ! | AAAGATGCTGGTTATGGTAA+AGG | + | chr5_4:8458297-8458316 | Msa0835160:CDS | 35.0% |
| TCATTATACTTCCCACTACA+AGG | - | chr5_4:8458366-8458385 | None:intergenic | 35.0% | |
| !! | GGTTTTGTGCATAAAGATCT+TGG | + | chr5_4:8458465-8458484 | Msa0835160:CDS | 35.0% |
| CATAAAGATCTTGGGGATAA+TGG | + | chr5_4:8458474-8458493 | Msa0835160:CDS | 35.0% | |
| !! | CTCTCACTTTTCTTCCATCA+TGG | + | chr5_4:8457216-8457235 | Msa0835160:CDS | 40.0% |
| ! | TTAAGGTGAGGTTGTCGTTT+GGG | - | chr5_4:8457363-8457382 | None:intergenic | 40.0% |
| ! | TTTAAGGTGAGGTTGTCGTT+TGG | - | chr5_4:8457364-8457383 | None:intergenic | 40.0% |
| TCATCGTAGAATGTTTGGTC+TGG | - | chr5_4:8457442-8457461 | None:intergenic | 40.0% | |
| CAGGATCATCGTAGAATGTT+TGG | - | chr5_4:8457447-8457466 | None:intergenic | 40.0% | |
| GTCATGGTATACTCCATTTC+AGG | - | chr5_4:8457466-8457485 | None:intergenic | 40.0% | |
| ! | TTCATCCCAGTCGTCTATTT+TGG | - | chr5_4:8457491-8457510 | None:intergenic | 40.0% |
| !! | AGCAAAGGAAAGAGTGTTGA+TGG | + | chr5_4:8457555-8457574 | Msa0835160:CDS | 40.0% |
| TCACCTATTGGATTCTTGCA+CGG | - | chr5_4:8457601-8457620 | None:intergenic | 40.0% | |
| ! | GTGGATTACTCTCGTATTCA+TGG | + | chr5_4:8457652-8457671 | Msa0835160:CDS | 40.0% |
| GCCCAATAAGCAAACATCTT+AGG | - | chr5_4:8457712-8457731 | None:intergenic | 40.0% | |
| TCATTGCAGCTTTCACAACA+GGG | - | chr5_4:8457741-8457760 | None:intergenic | 40.0% | |
| ATCATTGCAGCTTTCACAAC+AGG | - | chr5_4:8457742-8457761 | None:intergenic | 40.0% | |
| TGTTGTGAAAGCTGCAATGA+TGG | + | chr5_4:8457741-8457760 | Msa0835160:CDS | 40.0% | |
| AGGAAGCTTGAAATCCATGT+CGG | - | chr5_4:8457818-8457837 | None:intergenic | 40.0% | |
| TGATCCTTGTAACGTTTGAG+AGG | - | chr5_4:8457838-8457857 | None:intergenic | 40.0% | |
| !! | ATAACCTTGTTGTTCATGGC+TGG | + | chr5_4:8457857-8457876 | Msa0835160:CDS | 40.0% |
| CTCACTTGATCCATGAGAAA+CGG | + | chr5_4:8457881-8457900 | Msa0835160:CDS | 40.0% | |
| CATTAGATTTCATGGAGGCT+TGG | + | chr5_4:8457956-8457975 | Msa0835160:CDS | 40.0% | |
| ! | CTTCATAATCTGGGCTTTGT+GGG | - | chr5_4:8457993-8458012 | None:intergenic | 40.0% |
| TCTTCATAATCTGGGCTTTG+TGG | - | chr5_4:8457994-8458013 | None:intergenic | 40.0% | |
| AGCCCAGATTATGAAGAATG+GGG | + | chr5_4:8457997-8458016 | Msa0835160:CDS | 40.0% | |
| AAGAATGGGGTAAGATTCTC+CGG | + | chr5_4:8458010-8458029 | Msa0835160:CDS | 40.0% | |
| TCGCGATCGAGAAAGAAAAA+TGG | + | chr5_4:8458094-8458113 | Msa0835160:CDS | 40.0% | |
| CGCGATCGAGAAAGAAAAAT+GGG | + | chr5_4:8458095-8458114 | Msa0835160:CDS | 40.0% | |
| AGAAGGCGAATATTACTTCG+AGG | + | chr5_4:8458134-8458153 | Msa0835160:CDS | 40.0% | |
| GAAGGCGAATATTACTTCGA+GGG | + | chr5_4:8458135-8458154 | Msa0835160:CDS | 40.0% | |
| AAGGCGAATATTACTTCGAG+GGG | + | chr5_4:8458136-8458155 | Msa0835160:CDS | 40.0% | |
| CTGGTTATGGTAAAGGAAGT+TGG | + | chr5_4:8458304-8458323 | Msa0835160:CDS | 40.0% | |
| !! | CTCTCACTTTTCTTCCATCA+TGG | + | chr5_4:8457216-8457235 | Msa0835160:CDS | 40.0% |
| ! | TTAAGGTGAGGTTGTCGTTT+GGG | - | chr5_4:8457363-8457382 | None:intergenic | 40.0% |
| ! | TTTAAGGTGAGGTTGTCGTT+TGG | - | chr5_4:8457364-8457383 | None:intergenic | 40.0% |
| TCATCGTAGAATGTTTGGTC+TGG | - | chr5_4:8457442-8457461 | None:intergenic | 40.0% | |
| CAGGATCATCGTAGAATGTT+TGG | - | chr5_4:8457447-8457466 | None:intergenic | 40.0% | |
| GTCATGGTATACTCCATTTC+AGG | - | chr5_4:8457466-8457485 | None:intergenic | 40.0% | |
| ! | TTCATCCCAGTCGTCTATTT+TGG | - | chr5_4:8457491-8457510 | None:intergenic | 40.0% |
| !! | AGCAAAGGAAAGAGTGTTGA+TGG | + | chr5_4:8457555-8457574 | Msa0835160:CDS | 40.0% |
| TCACCTATTGGATTCTTGCA+CGG | - | chr5_4:8457601-8457620 | None:intergenic | 40.0% | |
| ! | GTGGATTACTCTCGTATTCA+TGG | + | chr5_4:8457652-8457671 | Msa0835160:CDS | 40.0% |
| GCCCAATAAGCAAACATCTT+AGG | - | chr5_4:8457712-8457731 | None:intergenic | 40.0% | |
| TCATTGCAGCTTTCACAACA+GGG | - | chr5_4:8457741-8457760 | None:intergenic | 40.0% | |
| ATCATTGCAGCTTTCACAAC+AGG | - | chr5_4:8457742-8457761 | None:intergenic | 40.0% | |
| TGTTGTGAAAGCTGCAATGA+TGG | + | chr5_4:8457741-8457760 | Msa0835160:CDS | 40.0% | |
| AGGAAGCTTGAAATCCATGT+CGG | - | chr5_4:8457818-8457837 | None:intergenic | 40.0% | |
| TGATCCTTGTAACGTTTGAG+AGG | - | chr5_4:8457838-8457857 | None:intergenic | 40.0% | |
| !! | ATAACCTTGTTGTTCATGGC+TGG | + | chr5_4:8457857-8457876 | Msa0835160:CDS | 40.0% |
| CTCACTTGATCCATGAGAAA+CGG | + | chr5_4:8457881-8457900 | Msa0835160:CDS | 40.0% | |
| CATTAGATTTCATGGAGGCT+TGG | + | chr5_4:8457956-8457975 | Msa0835160:CDS | 40.0% | |
| ! | CTTCATAATCTGGGCTTTGT+GGG | - | chr5_4:8457993-8458012 | None:intergenic | 40.0% |
| TCTTCATAATCTGGGCTTTG+TGG | - | chr5_4:8457994-8458013 | None:intergenic | 40.0% | |
| AGCCCAGATTATGAAGAATG+GGG | + | chr5_4:8457997-8458016 | Msa0835160:CDS | 40.0% | |
| AAGAATGGGGTAAGATTCTC+CGG | + | chr5_4:8458010-8458029 | Msa0835160:CDS | 40.0% | |
| TCGCGATCGAGAAAGAAAAA+TGG | + | chr5_4:8458094-8458113 | Msa0835160:CDS | 40.0% | |
| CGCGATCGAGAAAGAAAAAT+GGG | + | chr5_4:8458095-8458114 | Msa0835160:CDS | 40.0% | |
| AGAAGGCGAATATTACTTCG+AGG | + | chr5_4:8458134-8458153 | Msa0835160:CDS | 40.0% | |
| GAAGGCGAATATTACTTCGA+GGG | + | chr5_4:8458135-8458154 | Msa0835160:CDS | 40.0% | |
| AAGGCGAATATTACTTCGAG+GGG | + | chr5_4:8458136-8458155 | Msa0835160:CDS | 40.0% | |
| CTGGTTATGGTAAAGGAAGT+TGG | + | chr5_4:8458304-8458323 | Msa0835160:CDS | 40.0% | |
| AAAATGCTCCTCCAAGGAAG+AGG | - | chr5_4:8457294-8457313 | None:intergenic | 45.0% | |
| TCGTAGAATGTTTGGTCTGG+TGG | - | chr5_4:8457439-8457458 | None:intergenic | 45.0% | |
| !!! | GTCGTCTATTTTGGTGGTCA+TGG | - | chr5_4:8457482-8457501 | None:intergenic | 45.0% |
| TGACCACCAAAATAGACGAC+TGG | + | chr5_4:8457482-8457501 | Msa0835160:CDS | 45.0% | |
| GACCACCAAAATAGACGACT+GGG | + | chr5_4:8457483-8457502 | Msa0835160:CDS | 45.0% | |
| !! | ATCCCAGTCGTCTATTTTGG+TGG | - | chr5_4:8457488-8457507 | None:intergenic | 45.0% |
| TTTGCTCCTGCAGAGAAAGA+CGG | - | chr5_4:8457541-8457560 | None:intergenic | 45.0% | |
| !! | GAAAGAGTGTTGATGGTCAC+TGG | + | chr5_4:8457562-8457581 | Msa0835160:CDS | 45.0% |
| ATTGGATTCTTGCACGGAGA+AGG | - | chr5_4:8457595-8457614 | None:intergenic | 45.0% | |
| TCTCCGTGCAAGAATCCAAT+AGG | + | chr5_4:8457595-8457614 | Msa0835160:CDS | 45.0% | |
| AGATGCATTGTTCACCGACA+TGG | + | chr5_4:8457801-8457820 | Msa0835160:CDS | 45.0% | |
| GCTTCCTCTCAAACGTTACA+AGG | + | chr5_4:8457831-8457850 | Msa0835160:CDS | 45.0% | |
| CGTTTCTCATGGATCAAGTG+AGG | - | chr5_4:8457883-8457902 | None:intergenic | 45.0% | |
| !! | ACGCTGGTGTGTTTTTGATC+AGG | + | chr5_4:8457920-8457939 | Msa0835160:CDS | 45.0% |
| TTTCTCGATCGCGATCAGAT+AGG | - | chr5_4:8458088-8458107 | None:intergenic | 45.0% | |
| !! | GGGTATTGGGAAGAGATAGT+AGG | + | chr5_4:8458156-8458175 | Msa0835160:CDS | 45.0% |
| GCATGACGCCTTCTTAACTT+AGG | - | chr5_4:8458231-8458250 | None:intergenic | 45.0% | |
| GAGAAAGTGAGTGAAGCTCA+TGG | + | chr5_4:8458252-8458271 | Msa0835160:CDS | 45.0% | |
| ACAGGTTGTCAACCTTGTAG+TGG | + | chr5_4:8458351-8458370 | Msa0835160:CDS | 45.0% | |
| CAGGTTGTCAACCTTGTAGT+GGG | + | chr5_4:8458352-8458371 | Msa0835160:CDS | 45.0% | |
| TGTACACTGCTGATGCTTGT+TGG | + | chr5_4:8458388-8458407 | Msa0835160:CDS | 45.0% | |
| ! | ACTGCTGATGCTTGTTGGAA+TGG | + | chr5_4:8458393-8458412 | Msa0835160:CDS | 45.0% |
| ! | CTGCTGATGCTTGTTGGAAT+GGG | + | chr5_4:8458394-8458413 | Msa0835160:CDS | 45.0% |
| AAAATGCTCCTCCAAGGAAG+AGG | - | chr5_4:8457294-8457313 | None:intergenic | 45.0% | |
| TCGTAGAATGTTTGGTCTGG+TGG | - | chr5_4:8457439-8457458 | None:intergenic | 45.0% | |
| !!! | GTCGTCTATTTTGGTGGTCA+TGG | - | chr5_4:8457482-8457501 | None:intergenic | 45.0% |
| TGACCACCAAAATAGACGAC+TGG | + | chr5_4:8457482-8457501 | Msa0835160:CDS | 45.0% | |
| GACCACCAAAATAGACGACT+GGG | + | chr5_4:8457483-8457502 | Msa0835160:CDS | 45.0% | |
| !! | ATCCCAGTCGTCTATTTTGG+TGG | - | chr5_4:8457488-8457507 | None:intergenic | 45.0% |
| TTTGCTCCTGCAGAGAAAGA+CGG | - | chr5_4:8457541-8457560 | None:intergenic | 45.0% | |
| !! | GAAAGAGTGTTGATGGTCAC+TGG | + | chr5_4:8457562-8457581 | Msa0835160:CDS | 45.0% |
| ATTGGATTCTTGCACGGAGA+AGG | - | chr5_4:8457595-8457614 | None:intergenic | 45.0% | |
| TCTCCGTGCAAGAATCCAAT+AGG | + | chr5_4:8457595-8457614 | Msa0835160:CDS | 45.0% | |
| AGATGCATTGTTCACCGACA+TGG | + | chr5_4:8457801-8457820 | Msa0835160:CDS | 45.0% | |
| GCTTCCTCTCAAACGTTACA+AGG | + | chr5_4:8457831-8457850 | Msa0835160:CDS | 45.0% | |
| CGTTTCTCATGGATCAAGTG+AGG | - | chr5_4:8457883-8457902 | None:intergenic | 45.0% | |
| !! | ACGCTGGTGTGTTTTTGATC+AGG | + | chr5_4:8457920-8457939 | Msa0835160:CDS | 45.0% |
| TTTCTCGATCGCGATCAGAT+AGG | - | chr5_4:8458088-8458107 | None:intergenic | 45.0% | |
| !! | GGGTATTGGGAAGAGATAGT+AGG | + | chr5_4:8458156-8458175 | Msa0835160:CDS | 45.0% |
| GCATGACGCCTTCTTAACTT+AGG | - | chr5_4:8458231-8458250 | None:intergenic | 45.0% | |
| GAGAAAGTGAGTGAAGCTCA+TGG | + | chr5_4:8458252-8458271 | Msa0835160:CDS | 45.0% | |
| ACAGGTTGTCAACCTTGTAG+TGG | + | chr5_4:8458351-8458370 | Msa0835160:CDS | 45.0% | |
| CAGGTTGTCAACCTTGTAGT+GGG | + | chr5_4:8458352-8458371 | Msa0835160:CDS | 45.0% | |
| TGTACACTGCTGATGCTTGT+TGG | + | chr5_4:8458388-8458407 | Msa0835160:CDS | 45.0% | |
| ! | ACTGCTGATGCTTGTTGGAA+TGG | + | chr5_4:8458393-8458412 | Msa0835160:CDS | 45.0% |
| ! | CTGCTGATGCTTGTTGGAAT+GGG | + | chr5_4:8458394-8458413 | Msa0835160:CDS | 45.0% |
| !! | GGGAATGGGTTTTGCCATGA+TGG | - | chr5_4:8457233-8457252 | None:intergenic | 50.0% |
| TCTGATGGCTTCCTCTTCCT+TGG | + | chr5_4:8457280-8457299 | Msa0835160:CDS | 50.0% | |
| GAGCTGAAAATGCTCCTCCA+AGG | - | chr5_4:8457300-8457319 | None:intergenic | 50.0% | |
| ! | GTTTGGGATGGGGTTTGTGA+AGG | - | chr5_4:8457347-8457366 | None:intergenic | 50.0% |
| ! | TGAGGTTGTCGTTTGGGATG+GGG | - | chr5_4:8457357-8457376 | None:intergenic | 50.0% |
| ! | GTGAGGTTGTCGTTTGGGAT+GGG | - | chr5_4:8457358-8457377 | None:intergenic | 50.0% |
| ! | TGGTGGATCAAAGCGCAGAT+CGG | - | chr5_4:8457422-8457441 | None:intergenic | 50.0% |
| CATCATCCGTCTTTCTCTGC+AGG | + | chr5_4:8457532-8457551 | Msa0835160:CDS | 50.0% | |
| GTCTTTCTCTGCAGGAGCAA+AGG | + | chr5_4:8457540-8457559 | Msa0835160:CDS | 50.0% | |
| ATCCAGAAGCAGAGTGGATC+TGG | + | chr5_4:8457767-8457786 | Msa0835160:CDS | 50.0% | |
| AGAAGCAGAGTGGATCTGGT+GGG | + | chr5_4:8457771-8457790 | Msa0835160:CDS | 50.0% | |
| TGATCCATGAGAAACGGAGC+TGG | + | chr5_4:8457887-8457906 | Msa0835160:CDS | 50.0% | |
| ATGAGAAACGGAGCTGGACT+GGG | + | chr5_4:8457893-8457912 | Msa0835160:CDS | 50.0% | |
| !! | GGGAATGGGTTTTGCCATGA+TGG | - | chr5_4:8457233-8457252 | None:intergenic | 50.0% |
| TCTGATGGCTTCCTCTTCCT+TGG | + | chr5_4:8457280-8457299 | Msa0835160:CDS | 50.0% | |
| GAGCTGAAAATGCTCCTCCA+AGG | - | chr5_4:8457300-8457319 | None:intergenic | 50.0% | |
| ! | GTTTGGGATGGGGTTTGTGA+AGG | - | chr5_4:8457347-8457366 | None:intergenic | 50.0% |
| ! | TGAGGTTGTCGTTTGGGATG+GGG | - | chr5_4:8457357-8457376 | None:intergenic | 50.0% |
| ! | GTGAGGTTGTCGTTTGGGAT+GGG | - | chr5_4:8457358-8457377 | None:intergenic | 50.0% |
| ! | TGGTGGATCAAAGCGCAGAT+CGG | - | chr5_4:8457422-8457441 | None:intergenic | 50.0% |
| CATCATCCGTCTTTCTCTGC+AGG | + | chr5_4:8457532-8457551 | Msa0835160:CDS | 50.0% | |
| GTCTTTCTCTGCAGGAGCAA+AGG | + | chr5_4:8457540-8457559 | Msa0835160:CDS | 50.0% | |
| ATCCAGAAGCAGAGTGGATC+TGG | + | chr5_4:8457767-8457786 | Msa0835160:CDS | 50.0% | |
| AGAAGCAGAGTGGATCTGGT+GGG | + | chr5_4:8457771-8457790 | Msa0835160:CDS | 50.0% | |
| TGATCCATGAGAAACGGAGC+TGG | + | chr5_4:8457887-8457906 | Msa0835160:CDS | 50.0% | |
| ATGAGAAACGGAGCTGGACT+GGG | + | chr5_4:8457893-8457912 | Msa0835160:CDS | 50.0% | |
| GATGGCTTCCTCTTCCTTGG+AGG | + | chr5_4:8457283-8457302 | Msa0835160:CDS | 55.0% | |
| ! | GGTGAGGTTGTCGTTTGGGA+TGG | - | chr5_4:8457359-8457378 | None:intergenic | 55.0% |
| GGTGGATCAAAGCGCAGATC+GGG | - | chr5_4:8457421-8457440 | None:intergenic | 55.0% | |
| ! | CGACTGGGATGAAAAGCGTG+AGG | + | chr5_4:8457498-8457517 | Msa0835160:CDS | 55.0% |
| ! | GGGATGAAAAGCGTGAGGAG+TGG | + | chr5_4:8457503-8457522 | Msa0835160:CDS | 55.0% |
| TGGCACATCCAGAAGCAGAG+TGG | + | chr5_4:8457761-8457780 | Msa0835160:CDS | 55.0% | |
| CACCAGATCCACTCTGCTTC+TGG | - | chr5_4:8457772-8457791 | None:intergenic | 55.0% | |
| CAGAAGCAGAGTGGATCTGG+TGG | + | chr5_4:8457770-8457789 | Msa0835160:CDS | 55.0% | |
| GAGGCCAGCCATGAACAACA+AGG | - | chr5_4:8457864-8457883 | None:intergenic | 55.0% | |
| CAGTCCAGCTCCGTTTCTCA+TGG | - | chr5_4:8457894-8457913 | None:intergenic | 55.0% | |
| CATGAGAAACGGAGCTGGAC+TGG | + | chr5_4:8457892-8457911 | Msa0835160:CDS | 55.0% | |
| ! | AGCTGGACTGGGTTAAACGC+TGG | + | chr5_4:8457904-8457923 | Msa0835160:CDS | 55.0% |
| GATTTCATGGAGGCTTGGGC+TGG | + | chr5_4:8457961-8457980 | Msa0835160:CDS | 55.0% | |
| ! | ATGGAGGCTTGGGCTGGAAT+GGG | + | chr5_4:8457967-8457986 | Msa0835160:CDS | 55.0% |
| CCTGTCTGATCGTCTGACTC+GGG | - | chr5_4:8458060-8458079 | None:intergenic | 55.0% | |
| GCCTGTCTGATCGTCTGACT+CGG | - | chr5_4:8458061-8458080 | None:intergenic | 55.0% | |
| GATGGCTTCCTCTTCCTTGG+AGG | + | chr5_4:8457283-8457302 | Msa0835160:CDS | 55.0% | |
| ! | GGTGAGGTTGTCGTTTGGGA+TGG | - | chr5_4:8457359-8457378 | None:intergenic | 55.0% |
| GGTGGATCAAAGCGCAGATC+GGG | - | chr5_4:8457421-8457440 | None:intergenic | 55.0% | |
| ! | CGACTGGGATGAAAAGCGTG+AGG | + | chr5_4:8457498-8457517 | Msa0835160:CDS | 55.0% |
| ! | GGGATGAAAAGCGTGAGGAG+TGG | + | chr5_4:8457503-8457522 | Msa0835160:CDS | 55.0% |
| TGGCACATCCAGAAGCAGAG+TGG | + | chr5_4:8457761-8457780 | Msa0835160:CDS | 55.0% | |
| CACCAGATCCACTCTGCTTC+TGG | - | chr5_4:8457772-8457791 | None:intergenic | 55.0% | |
| CAGAAGCAGAGTGGATCTGG+TGG | + | chr5_4:8457770-8457789 | Msa0835160:CDS | 55.0% | |
| GAGGCCAGCCATGAACAACA+AGG | - | chr5_4:8457864-8457883 | None:intergenic | 55.0% | |
| CAGTCCAGCTCCGTTTCTCA+TGG | - | chr5_4:8457894-8457913 | None:intergenic | 55.0% | |
| CATGAGAAACGGAGCTGGAC+TGG | + | chr5_4:8457892-8457911 | Msa0835160:CDS | 55.0% | |
| ! | AGCTGGACTGGGTTAAACGC+TGG | + | chr5_4:8457904-8457923 | Msa0835160:CDS | 55.0% |
| GATTTCATGGAGGCTTGGGC+TGG | + | chr5_4:8457961-8457980 | Msa0835160:CDS | 55.0% | |
| ! | ATGGAGGCTTGGGCTGGAAT+GGG | + | chr5_4:8457967-8457986 | Msa0835160:CDS | 55.0% |
| CCTGTCTGATCGTCTGACTC+GGG | - | chr5_4:8458060-8458079 | None:intergenic | 55.0% | |
| GCCTGTCTGATCGTCTGACT+CGG | - | chr5_4:8458061-8458080 | None:intergenic | 55.0% | |
| ! | CATGGAGGCTTGGGCTGGAA+TGG | + | chr5_4:8457966-8457985 | Msa0835160:CDS | 60.0% |
| CCCGAGTCAGACGATCAGAC+AGG | + | chr5_4:8458057-8458076 | Msa0835160:CDS | 60.0% | |
| ! | CATGGAGGCTTGGGCTGGAA+TGG | + | chr5_4:8457966-8457985 | Msa0835160:CDS | 60.0% |
| CCCGAGTCAGACGATCAGAC+AGG | + | chr5_4:8458057-8458076 | Msa0835160:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 8457193 | 8458533 | 8457193 | ID=Msa0835160;Name=Msa0835160 |
| chr5_4 | mRNA | 8457193 | 8458533 | 8457193 | ID=Msa0835160-mRNA-1;Parent=Msa0835160;Name=Msa0835160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|446 |
| chr5_4 | exon | 8457193 | 8458533 | 8457193 | ID=Msa0835160-mRNA-1:exon:3710;Parent=Msa0835160-mRNA-1 |
| chr5_4 | CDS | 8457193 | 8458533 | 8457193 | ID=Msa0835160-mRNA-1:cds;Parent=Msa0835160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
