Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798650 | XP_003611874.1 | 95.000 | 740 | 24 | 8 | 16 | 748 | 18 | 751 | 0.0 | 1210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798650 | sp|Q9SW80|BLH2_ARATH | 45.565 | 823 | 274 | 25 | 1 | 744 | 1 | 728 | 1.69e-170 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798650 | G7KAR9 | 95.000 | 740 | 24 | 8 | 16 | 748 | 18 | 751 | 0.0 | 1210 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0798650 | TF | HB-BELL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0798650 | Msa0837140 | 0.814424 | 1.551393e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798650 | MtrunA17_Chr5g0403251 | 95.000 | 740 | 24 | 8 | 16 | 748 | 18 | 751 | 0.0 | 1210 |
| Msa0798650 | MtrunA17_Chr8g0373801 | 52.968 | 876 | 237 | 35 | 1 | 746 | 1 | 831 | 0.0 | 682 |
| Msa0798650 | MtrunA17_Chr8g0387321 | 59.328 | 268 | 95 | 4 | 322 | 584 | 174 | 432 | 2.81e-99 | 319 |
| Msa0798650 | MtrunA17_Chr1g0155681 | 51.786 | 280 | 111 | 4 | 330 | 597 | 165 | 432 | 2.61e-89 | 293 |
| Msa0798650 | MtrunA17_Chr1g0177751 | 45.833 | 336 | 165 | 4 | 302 | 635 | 128 | 448 | 7.00e-82 | 274 |
| Msa0798650 | MtrunA17_Chr3g0141941 | 47.535 | 284 | 110 | 4 | 334 | 599 | 161 | 423 | 1.64e-80 | 266 |
| Msa0798650 | MtrunA17_Chr7g0267481 | 47.077 | 325 | 153 | 5 | 336 | 654 | 172 | 483 | 4.28e-80 | 269 |
| Msa0798650 | MtrunA17_Chr4g0025521 | 53.008 | 266 | 116 | 4 | 335 | 596 | 217 | 477 | 4.51e-74 | 254 |
| Msa0798650 | MtrunA17_Chr4g0008591 | 43.605 | 344 | 155 | 8 | 294 | 630 | 156 | 467 | 7.56e-73 | 248 |
| Msa0798650 | MtrunA17_Chr4g0028701 | 39.259 | 405 | 168 | 13 | 327 | 678 | 241 | 620 | 2.98e-68 | 237 |
| Msa0798650 | MtrunA17_Chr3g0141931 | 44.964 | 278 | 130 | 9 | 326 | 595 | 160 | 422 | 1.93e-66 | 226 |
| Msa0798650 | MtrunA17_Chr7g0240371 | 40.303 | 330 | 161 | 9 | 326 | 639 | 113 | 422 | 6.37e-64 | 222 |
| Msa0798650 | MtrunA17_Chr2g0327021 | 38.801 | 317 | 156 | 8 | 327 | 629 | 244 | 536 | 1.12e-58 | 210 |
| Msa0798650 | MtrunA17_Chr1g0151681 | 35.640 | 289 | 155 | 9 | 336 | 602 | 232 | 511 | 1.69e-42 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798650 | AT4G36870.2 | 45.565 | 823 | 274 | 25 | 1 | 744 | 1 | 728 | 1.72e-171 | 511 |
| Msa0798650 | AT4G36870.1 | 45.565 | 823 | 274 | 25 | 1 | 744 | 1 | 728 | 1.72e-171 | 511 |
| Msa0798650 | AT4G36870.4 | 49.919 | 617 | 190 | 19 | 1 | 569 | 1 | 546 | 4.53e-151 | 452 |
| Msa0798650 | AT4G36870.3 | 49.756 | 615 | 190 | 19 | 1 | 567 | 1 | 544 | 5.64e-149 | 447 |
| Msa0798650 | AT5G41410.1 | 51.282 | 273 | 119 | 3 | 339 | 598 | 197 | 468 | 5.04e-89 | 292 |
| Msa0798650 | AT4G34610.2 | 54.340 | 265 | 105 | 4 | 332 | 594 | 137 | 387 | 1.56e-87 | 286 |
| Msa0798650 | AT4G34610.4 | 54.340 | 265 | 105 | 4 | 332 | 594 | 137 | 387 | 1.56e-87 | 286 |
| Msa0798650 | AT4G34610.3 | 54.340 | 265 | 105 | 4 | 332 | 594 | 137 | 387 | 1.56e-87 | 286 |
| Msa0798650 | AT4G34610.1 | 54.340 | 265 | 105 | 4 | 332 | 594 | 137 | 387 | 1.56e-87 | 286 |
| Msa0798650 | AT2G16400.1 | 50.342 | 292 | 123 | 5 | 323 | 610 | 98 | 371 | 5.88e-84 | 275 |
| Msa0798650 | AT1G75410.1 | 51.880 | 266 | 116 | 5 | 332 | 595 | 165 | 420 | 2.18e-83 | 275 |
| Msa0798650 | AT1G75410.2 | 51.880 | 266 | 116 | 5 | 332 | 595 | 165 | 420 | 2.18e-83 | 275 |
| Msa0798650 | AT1G19700.1 | 51.812 | 276 | 119 | 6 | 329 | 597 | 160 | 428 | 1.17e-82 | 273 |
| Msa0798650 | AT1G19700.3 | 51.812 | 276 | 119 | 6 | 329 | 597 | 160 | 428 | 1.17e-82 | 273 |
| Msa0798650 | AT1G19700.5 | 51.812 | 276 | 119 | 6 | 329 | 597 | 160 | 428 | 1.17e-82 | 273 |
| Msa0798650 | AT1G19700.4 | 51.812 | 276 | 119 | 6 | 329 | 597 | 160 | 428 | 1.17e-82 | 273 |
| Msa0798650 | AT1G19700.2 | 51.812 | 276 | 119 | 6 | 329 | 597 | 160 | 428 | 1.17e-82 | 273 |
| Msa0798650 | AT2G35940.3 | 48.000 | 275 | 114 | 6 | 329 | 582 | 180 | 446 | 2.33e-72 | 249 |
| Msa0798650 | AT2G35940.1 | 48.000 | 275 | 114 | 6 | 329 | 582 | 180 | 446 | 2.33e-72 | 249 |
| Msa0798650 | AT2G35940.2 | 48.000 | 275 | 114 | 6 | 329 | 582 | 180 | 446 | 2.33e-72 | 249 |
| Msa0798650 | AT1G75410.3 | 48.739 | 238 | 112 | 4 | 332 | 568 | 165 | 393 | 9.85e-66 | 224 |
| Msa0798650 | AT2G27220.1 | 41.016 | 256 | 117 | 3 | 341 | 596 | 82 | 303 | 4.71e-58 | 204 |
| Msa0798650 | AT2G27220.3 | 41.016 | 256 | 117 | 3 | 341 | 596 | 82 | 303 | 4.71e-58 | 204 |
| Msa0798650 | AT2G27220.2 | 38.996 | 259 | 136 | 4 | 341 | 596 | 82 | 321 | 6.97e-55 | 196 |
| Msa0798650 | AT2G27990.1 | 41.948 | 267 | 123 | 7 | 327 | 591 | 258 | 494 | 5.15e-54 | 196 |
| Msa0798650 | AT1G75430.1 | 37.943 | 282 | 151 | 6 | 336 | 605 | 17 | 286 | 1.72e-53 | 187 |
| Msa0798650 | AT4G32980.1 | 34.448 | 299 | 154 | 9 | 326 | 619 | 196 | 457 | 1.36e-41 | 159 |
| Msa0798650 | AT4G32980.2 | 34.448 | 299 | 154 | 9 | 326 | 619 | 196 | 457 | 1.36e-41 | 159 |
| Msa0798650 | AT2G27990.2 | 34.529 | 223 | 114 | 7 | 327 | 547 | 258 | 450 | 6.33e-28 | 118 |
| Msa0798650 | AT1G75430.2 | 30.804 | 224 | 131 | 6 | 336 | 547 | 17 | 228 | 1.83e-23 | 101 |
Find 161 sgRNAs with CRISPR-Local
Find 535 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCAAATTCTGGTAATTT+TGG | 0.109054 | 5_3:+11388183 | Msa0798650:CDS |
| TGTCCAAAATTACCAGAATT+TGG | 0.120803 | 5_3:-11388186 | None:intergenic |
| ACTTTCTCTATTAGAGATTT+TGG | 0.122211 | 5_3:+11396364 | Msa0798650:exon |
| GATTATGACTTTGTAATAAT+TGG | 0.193571 | 5_3:-11388500 | None:intergenic |
| TTGGATCATCAACTCTTATT+AGG | 0.217445 | 5_3:+11396265 | Msa0798650:CDS |
| CATTTAAATTCTTCCATTAT+AGG | 0.247668 | 5_3:+11396390 | Msa0798650:three_prime_UTR |
| AAACCTTGCAAGGTATTATT+AGG | 0.255415 | 5_3:-11388162 | None:intergenic |
| TAATAATTGGTATCCATTAA+TGG | 0.260156 | 5_3:-11388487 | None:intergenic |
| TTGAACAATCCAAGTTTCTT+TGG | 0.267267 | 5_3:-11387624 | None:intergenic |
| AATCCAAGTTTCTTTGGTTT+TGG | 0.271415 | 5_3:-11387618 | None:intergenic |
| CAAGGAGGAGGGACCATTAA+TGG | 0.280022 | 5_3:+11388474 | Msa0798650:CDS |
| AAGGTATTATTAGGAGGGTT+AGG | 0.282608 | 5_3:-11388153 | None:intergenic |
| CATCTATTGGCACGACAAAC+TGG | 0.289203 | 5_3:+11393406 | Msa0798650:CDS |
| TTTGATGTGATGATGGGTTT+TGG | 0.291189 | 5_3:+11390866 | Msa0798650:CDS |
| TCATCAACTCTTATTAGGTT+TGG | 0.291499 | 5_3:+11396270 | Msa0798650:CDS |
| GCAGCCTAACTTTGTCCCTT+TGG | 0.308045 | 5_3:-11387747 | None:intergenic |
| CATCAACTCTTATTAGGTTT+GGG | 0.309054 | 5_3:+11396271 | Msa0798650:CDS |
| GAAATGCTCTTTGTTGTCTT+AGG | 0.315855 | 5_3:-11391066 | None:intergenic |
| CACTGTTGTTGCTATTGCTT+TGG | 0.320557 | 5_3:-11395945 | None:intergenic |
| CATAATCAAGGTCAAGGATA+TGG | 0.328426 | 5_3:+11388516 | Msa0798650:CDS |
| GCATCTTAAAATTCCTATAA+TGG | 0.333447 | 5_3:-11396403 | None:intergenic |
| CTGCTTCATTAAGTTCTTGT+TGG | 0.335542 | 5_3:-11395894 | None:intergenic |
| AAGCCTAGGGGTCTCACCTT+TGG | 0.338082 | 5_3:-11391026 | None:intergenic |
| GTTGCAGAAGATTATGAAAC+AGG | 0.340268 | 5_3:+11396234 | Msa0798650:CDS |
| ACATTGGAGGAACAATTGTT+AGG | 0.346921 | 5_3:-11388672 | None:intergenic |
| ATTATCATTATCTTCTTCAT+TGG | 0.352999 | 5_3:+11388278 | Msa0798650:CDS |
| ATGGATGACACGTGTCGATA+TGG | 0.353373 | 5_3:+11396204 | Msa0798650:CDS |
| TTGCGAATGGGAGGAGGAGG+AGG | 0.368643 | 5_3:+11388324 | Msa0798650:CDS |
| AGGTATTATTAGGAGGGTTA+GGG | 0.391338 | 5_3:-11388152 | None:intergenic |
| TTCCTTTGTCAGCTGCTGAT+AGG | 0.391990 | 5_3:+11388739 | Msa0798650:CDS |
| TGGTGGCAGGTCTGAATCAT+AGG | 0.392301 | 5_3:-11396166 | None:intergenic |
| CGAATGGGAGGAGGAGGAGG+AGG | 0.398256 | 5_3:+11388327 | Msa0798650:CDS |
| AGATCCAAAGGGACAAAGTT+AGG | 0.403966 | 5_3:+11387743 | Msa0798650:CDS |
| AGATTGCTTGCTGATAATCT+TGG | 0.405568 | 5_3:-11387663 | None:intergenic |
| AGCAGCAGCAACAGATCCAA+AGG | 0.414064 | 5_3:+11387731 | Msa0798650:CDS |
| TCCCATTCGCAATTCTTCCT+CGG | 0.414387 | 5_3:-11388313 | None:intergenic |
| ATGTTGGTGGTGTTTGTGTT+TGG | 0.414593 | 5_3:-11395972 | None:intergenic |
| GGTGACGTGTCACTCACGTT+AGG | 0.428419 | 5_3:+11396306 | Msa0798650:CDS |
| CATTGGAGGAACAATTGTTA+GGG | 0.430971 | 5_3:-11388671 | None:intergenic |
| GGTGGTGTTGATGGTGGTTG+TGG | 0.431955 | 5_3:-11396124 | None:intergenic |
| TACAATATTCAAGGTGGAAG+TGG | 0.433550 | 5_3:+11388387 | Msa0798650:CDS |
| AACTGGGCTATCACGAAATC+AGG | 0.434392 | 5_3:+11393423 | Msa0798650:CDS |
| GTTGCTGTTGCTGTTGATGT+TGG | 0.447932 | 5_3:-11395988 | None:intergenic |
| GAGAAAGAAGGTGCAGGAGG+AGG | 0.447999 | 5_3:+11390998 | Msa0798650:CDS |
| CAACAGGTTCAGAAAATGAT+TGG | 0.449106 | 5_3:+11387941 | Msa0798650:CDS |
| GAATTGCGAATGGGAGGAGG+AGG | 0.449389 | 5_3:+11388321 | Msa0798650:CDS |
| TGATGCAGATAAGCATCTAT+TGG | 0.450574 | 5_3:+11393393 | Msa0798650:CDS |
| GTTCAAGTACTTTAAGCCTA+GGG | 0.450908 | 5_3:-11391039 | None:intergenic |
| CTCAGAGACGGTGGTGTTGA+TGG | 0.454445 | 5_3:-11396133 | None:intergenic |
| GTTGAAGGACAAGGTGTTCA+AGG | 0.454459 | 5_3:+11388249 | Msa0798650:CDS |
| AACATGGGAATAGCAGCAAT+AGG | 0.457173 | 5_3:+11387550 | None:intergenic |
| GATTGCTTGCTGATAATCTT+GGG | 0.458597 | 5_3:-11387662 | None:intergenic |
| GATTATCAGCAAGCAATCTT+CGG | 0.464683 | 5_3:+11387667 | Msa0798650:CDS |
| TGGTACATCTCTTCTACCAT+AGG | 0.465245 | 5_3:-11395874 | None:intergenic |
| TATAATAATTACAATATTCA+AGG | 0.469403 | 5_3:+11388378 | Msa0798650:CDS |
| TCTAACAATTCAGCTGTTGA+AGG | 0.474903 | 5_3:-11387865 | None:intergenic |
| CTTGATCCATCATACCCATC+TGG | 0.477420 | 5_3:-11391090 | None:intergenic |
| GAACTCATTTGATGTGATGA+TGG | 0.480790 | 5_3:+11390859 | Msa0798650:CDS |
| CCTTGCAAGGTATTATTAGG+AGG | 0.482782 | 5_3:-11388159 | None:intergenic |
| TGTTCAAGTACTTTAAGCCT+AGG | 0.484746 | 5_3:-11391040 | None:intergenic |
| AGGTTTGGGTCCACTACTAC+TGG | 0.485304 | 5_3:+11396285 | Msa0798650:CDS |
| CGATCAGGCAAGCCTCTTTG+TGG | 0.487003 | 5_3:-11391124 | None:intergenic |
| CAAGAAGGAGGTGTTGTTGA+AGG | 0.492783 | 5_3:+11388234 | Msa0798650:CDS |
| AATTTACAATTGCAAGGAGG+AGG | 0.494958 | 5_3:+11388462 | Msa0798650:CDS |
| TCTTGAAGCAATTCTTGAGT+AGG | 0.496981 | 5_3:-11388582 | None:intergenic |
| GCTGTTGCTGTTGATGTTGG+TGG | 0.498949 | 5_3:-11395985 | None:intergenic |
| AGACAACATCCACAACCAAC+AGG | 0.499590 | 5_3:+11387925 | Msa0798650:CDS |
| TAACCAAAGGTGAGACCCCT+AGG | 0.502296 | 5_3:+11391023 | Msa0798650:CDS |
| CAAACTGGTTCATAAATGCC+AGG | 0.503008 | 5_3:+11395836 | Msa0798650:CDS |
| CCTCCTAATAATACCTTGCA+AGG | 0.509270 | 5_3:+11388159 | Msa0798650:CDS |
| CCATTGATCTGTGTGGTGGC+AGG | 0.513586 | 5_3:-11396179 | None:intergenic |
| GGTTAGATTGTGGAAACCTA+TGG | 0.513783 | 5_3:+11395858 | Msa0798650:CDS |
| ACACCAAAACCAAAGAAACT+TGG | 0.514188 | 5_3:+11387615 | Msa0798650:CDS |
| AACAATTGTTCCTCCAATGT+TGG | 0.514198 | 5_3:+11388675 | Msa0798650:CDS |
| TGTTGATGATTTAATTTGTA+CGG | 0.516004 | 5_3:-11388432 | None:intergenic |
| TTGAATTTATCAGAAGGAGA+AGG | 0.516929 | 5_3:+11387778 | Msa0798650:CDS |
| AGATGCTTATCTGCATCACT+TGG | 0.518033 | 5_3:-11393388 | None:intergenic |
| GCAGCAGCAACAGATCCAAA+GGG | 0.519502 | 5_3:+11387732 | Msa0798650:CDS |
| TATGAAACAGGTTCTGACAT+TGG | 0.520544 | 5_3:+11396246 | Msa0798650:CDS |
| GTGACGTGTCACTCACGTTA+GGG | 0.521490 | 5_3:+11396307 | Msa0798650:CDS |
| GAAGGAGAAGGAGAAGAAAG+AGG | 0.521795 | 5_3:+11387790 | Msa0798650:CDS |
| AAGCAAAGTTGTGAGTTACT+AGG | 0.521988 | 5_3:+11390974 | Msa0798650:CDS |
| TGGTTGTGGATTGCATTGCT+TGG | 0.522581 | 5_3:-11396110 | None:intergenic |
| ATCTATTGGCACGACAAACT+GGG | 0.524043 | 5_3:+11393407 | Msa0798650:CDS |
| ATCTTCGGCTTCTCCTCGAA+TGG | 0.524189 | 5_3:+11387682 | Msa0798650:CDS |
| TTATTGATTGCAACTAGTGA+AGG | 0.528142 | 5_3:-11396063 | None:intergenic |
| GACAAAGTTAGGCTGCTACA+AGG | 0.533345 | 5_3:+11387754 | Msa0798650:CDS |
| AGGATTAGAATCACCAACAT+TGG | 0.534289 | 5_3:-11388688 | None:intergenic |
| TATACTTGATACAGGTGGAC+AGG | 0.536316 | 5_3:+11390798 | Msa0798650:intron |
| TAAATGCCAGGGTTAGATTG+TGG | 0.540228 | 5_3:+11395848 | Msa0798650:CDS |
| GCTTCTTTCCATGCTTGATG+AGG | 0.541832 | 5_3:+11388788 | Msa0798650:CDS |
| TATCAGGCACATTGCCAGCA+TGG | 0.544137 | 5_3:-11396335 | None:intergenic |
| CCTGCCACCACACAGATCAA+TGG | 0.548058 | 5_3:+11396179 | Msa0798650:CDS |
| CTATTGTGAACAAATGCAAA+TGG | 0.548377 | 5_3:+11390832 | Msa0798650:CDS |
| CTTGCAAGGTATTATTAGGA+GGG | 0.550286 | 5_3:-11388158 | None:intergenic |
| TGATCTCTCGAATCCATTCG+AGG | 0.551486 | 5_3:-11387695 | None:intergenic |
| ACGTTAGGGTTACGCCATGC+TGG | 0.552293 | 5_3:+11396321 | Msa0798650:CDS |
| TTGTTTGATGAGATTGAGAA+GGG | 0.552912 | 5_3:-11388065 | None:intergenic |
| GGAGGTGTGTATGAAACAGC+AGG | 0.555434 | 5_3:+11387811 | Msa0798650:CDS |
| CAAGGGTTGAATTTATCAGA+AGG | 0.556382 | 5_3:+11387772 | Msa0798650:CDS |
| GAAGAATTGCGAATGGGAGG+AGG | 0.556651 | 5_3:+11388318 | Msa0798650:CDS |
| CAAAGTCATAATCAAGGTCA+AGG | 0.557301 | 5_3:+11388510 | Msa0798650:CDS |
| GGTTCAGAAAATGATTGGTA+TGG | 0.558104 | 5_3:+11387946 | Msa0798650:CDS |
| TCAGCAGCTGACAAAGGAAG+AGG | 0.558150 | 5_3:-11388735 | None:intergenic |
| GGTGGCAGGTCTGAATCATA+GGG | 0.560511 | 5_3:-11396165 | None:intergenic |
| ATTTCACCAGATGGGTATGA+TGG | 0.563946 | 5_3:+11391084 | Msa0798650:CDS |
| ATAGGATTGAACATCAAAGA+AGG | 0.565025 | 5_3:+11388757 | Msa0798650:CDS |
| AACTCATTTGATGTGATGAT+GGG | 0.566821 | 5_3:+11390860 | Msa0798650:CDS |
| ACAAAGAGCATTTCACCAGA+TGG | 0.570809 | 5_3:+11391075 | Msa0798650:CDS |
| AAAACATTGACAGAACGATC+AGG | 0.573427 | 5_3:-11391139 | None:intergenic |
| GGAGGTGTTGTTGAAGGACA+AGG | 0.574861 | 5_3:+11388240 | Msa0798650:CDS |
| ATTAGAATCACCAACATTGG+AGG | 0.575203 | 5_3:-11388685 | None:intergenic |
| GCCGAGGAAGAATTGCGAAT+GGG | 0.575509 | 5_3:+11388312 | Msa0798650:CDS |
| GCATTGAATTTACAATTGCA+AGG | 0.575976 | 5_3:+11388456 | Msa0798650:CDS |
| CTAGGAGAGAAAGAAGGTGC+AGG | 0.576408 | 5_3:+11390992 | Msa0798650:CDS |
| ACAAAGTTAGGCTGCTACAA+GGG | 0.578561 | 5_3:+11387755 | Msa0798650:CDS |
| GTATGATGGATCAAGAAGCT+TGG | 0.579404 | 5_3:+11391098 | Msa0798650:CDS |
| TTATTACAAAGTCATAATCA+AGG | 0.585308 | 5_3:+11388504 | Msa0798650:CDS |
| AGAATTTGGAAAACCTTGCA+AGG | 0.586012 | 5_3:-11388172 | None:intergenic |
| TACGGATATGATGAAGAAGA+TGG | 0.586895 | 5_3:-11388414 | None:intergenic |
| ATTACATGCCTCATCAAGCA+TGG | 0.588810 | 5_3:-11388796 | None:intergenic |
| ACCACACAGATCAATGGCCA+TGG | 0.589823 | 5_3:+11396185 | Msa0798650:CDS |
| GTGTGTCTTCAAGTAAACAA+TGG | 0.592067 | 5_3:-11387596 | None:intergenic |
| CAAAGAGCATTTCACCAGAT+GGG | 0.592402 | 5_3:+11391076 | Msa0798650:CDS |
| ATATCGACACGTGTCATCCA+TGG | 0.592726 | 5_3:-11396202 | None:intergenic |
| AAACTGGTTCATAAATGCCA+GGG | 0.593981 | 5_3:+11395837 | Msa0798650:CDS |
| TGACACGTCACCAGTAGTAG+TGG | 0.595751 | 5_3:-11396295 | None:intergenic |
| TATTGATTGCAACTAGTGAA+GGG | 0.595940 | 5_3:-11396062 | None:intergenic |
| GTTGTTTGATGAGATTGAGA+AGG | 0.596534 | 5_3:-11388066 | None:intergenic |
| TTCAAGTACTTTAAGCCTAG+GGG | 0.597443 | 5_3:-11391038 | None:intergenic |
| AATATTCAAGGTGGAAGTGG+AGG | 0.598539 | 5_3:+11388390 | Msa0798650:CDS |
| ACAATGGAAGAAGAAGAAGA+AGG | 0.599551 | 5_3:-11387580 | None:intergenic |
| ATTTACAATTGCAAGGAGGA+GGG | 0.600973 | 5_3:+11388463 | Msa0798650:CDS |
| ATCCTATCAGCAGCTGACAA+AGG | 0.603493 | 5_3:-11388741 | None:intergenic |
| AATAGTACTACTACTCAAGA+AGG | 0.607029 | 5_3:+11388219 | Msa0798650:CDS |
| AGCCGAGGAAGAATTGCGAA+TGG | 0.611459 | 5_3:+11388311 | Msa0798650:CDS |
| GAGGAAGAATTGCGAATGGG+AGG | 0.619684 | 5_3:+11388315 | Msa0798650:CDS |
| GGAGAAGGAGAAGAAAGAGG+AGG | 0.619996 | 5_3:+11387793 | Msa0798650:CDS |
| GATTGAACATCAAAGAAGGA+AGG | 0.620262 | 5_3:+11388761 | Msa0798650:CDS |
| AATAATTACAATATTCAAGG+TGG | 0.620476 | 5_3:+11388381 | Msa0798650:CDS |
| GGAGAGAAAGAAGGTGCAGG+AGG | 0.623872 | 5_3:+11390995 | Msa0798650:CDS |
| GCAGGAGGAGGTTTAACCAA+AGG | 0.632688 | 5_3:+11391010 | Msa0798650:CDS |
| TGGTATGGTAATAACAGACA+AGG | 0.634269 | 5_3:+11387961 | Msa0798650:CDS |
| ACAAGAACTTAATGAAGCAG+AGG | 0.640031 | 5_3:+11395897 | Msa0798650:CDS |
| CAACACCACCGTCTCTGAGG+TGG | 0.643010 | 5_3:+11396137 | Msa0798650:CDS |
| GGGTGGAACCACCTCAGAGA+CGG | 0.647726 | 5_3:-11396145 | None:intergenic |
| GAGTTACTAGGAGAGAAAGA+AGG | 0.649147 | 5_3:+11390986 | Msa0798650:CDS |
| ATGGCCATTGATCTGTGTGG+TGG | 0.651496 | 5_3:-11396183 | None:intergenic |
| ATTGGAAGCTGCAAAAGCCG+AGG | 0.656833 | 5_3:+11388296 | Msa0798650:CDS |
| CATCAACACCACCGTCTCTG+AGG | 0.661848 | 5_3:+11396134 | Msa0798650:CDS |
| GGCAGGTCTGAATCATAGGG+TGG | 0.663152 | 5_3:-11396162 | None:intergenic |
| AGGTTTCCACAATCTAACCC+TGG | 0.667828 | 5_3:-11395854 | None:intergenic |
| AGTACTACTACTCAAGAAGG+AGG | 0.671426 | 5_3:+11388222 | Msa0798650:CDS |
| AGAGACGGTGGTGTTGATGG+TGG | 0.674556 | 5_3:-11396130 | None:intergenic |
| TGGAACCACCTCAGAGACGG+TGG | 0.677945 | 5_3:-11396142 | None:intergenic |
| TTGAATTTACAATTGCAAGG+AGG | 0.690593 | 5_3:+11388459 | Msa0798650:CDS |
| GAAGCTTGGAGACCACAAAG+AGG | 0.697296 | 5_3:+11391112 | Msa0798650:CDS |
| GGTATGGTAATAACAGACAA+GGG | 0.699769 | 5_3:+11387962 | Msa0798650:CDS |
| TCCATGGCCATTGATCTGTG+TGG | 0.700090 | 5_3:-11396186 | None:intergenic |
| AGACGAAGAACGAAACGTTG+CGG | 0.719547 | 5_3:-11387890 | None:intergenic |
| CAAAGCAATAGCAACAACAG+TGG | 0.740466 | 5_3:+11395946 | Msa0798650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATAATAAAAATTTA+GGG | - | chr5_3:11391597-11391616 | None:intergenic | 0.0% |
| !!! | TTTTTTTATAATAAAAATTT+AGG | - | chr5_3:11391598-11391617 | None:intergenic | 0.0% |
| !! | ATATTAATATTAATATTAAT+AGG | + | chr5_3:11392888-11392907 | Msa0798650:intron | 0.0% |
| !! | TATAATAATTACAATATTCA+AGG | + | chr5_3:11388378-11388397 | Msa0798650:CDS | 10.0% |
| !! | AAATATGAAGAAAAATATAT+GGG | - | chr5_3:11388874-11388893 | None:intergenic | 10.0% |
| !! | TAAATATGAAGAAAAATATA+TGG | - | chr5_3:11388875-11388894 | None:intergenic | 10.0% |
| !!! | TATTAATCAGAATTTTATAT+TGG | - | chr5_3:11389321-11389340 | None:intergenic | 10.0% |
| !!! | TTTTAATCAATCTATTTAAT+TGG | + | chr5_3:11389677-11389696 | Msa0798650:intron | 10.0% |
| !! | TTTAAATTATTAATGATGAT+CGG | - | chr5_3:11390581-11390600 | None:intergenic | 10.0% |
| !!! | TTAAATATAAAGTGTTAAAA+GGG | + | chr5_3:11391390-11391409 | Msa0798650:intron | 10.0% |
| !! | TTAATTAATCAATTCATATA+AGG | + | chr5_3:11393529-11393548 | Msa0798650:intron | 10.0% |
| !! | TTTATCTAAAAAAACAAATT+AGG | - | chr5_3:11393699-11393718 | None:intergenic | 10.0% |
| !! | TATATAAAACAAAAAGAAAA+AGG | + | chr5_3:11394772-11394791 | Msa0798650:intron | 10.0% |
| !!! | GAAAAAAATTGATTTAAATT+TGG | - | chr5_3:11395625-11395644 | None:intergenic | 10.0% |
| !! | AATATGAAGAAAAATATATG+GGG | - | chr5_3:11388873-11388892 | None:intergenic | 15.0% |
| !!! | CACATAAATTTCATTTTTAA+TGG | - | chr5_3:11389116-11389135 | None:intergenic | 15.0% |
| !!! | TATATTATTACATTTTGCTA+TGG | + | chr5_3:11389211-11389230 | Msa0798650:intron | 15.0% |
| !! | TATCTTCAAAATTATTTATG+CGG | + | chr5_3:11389246-11389265 | Msa0798650:intron | 15.0% |
| !!! | ATTTGTTTTAAGAATATCTT+GGG | - | chr5_3:11390352-11390371 | None:intergenic | 15.0% |
| !!! | TATTTGTTTTAAGAATATCT+TGG | - | chr5_3:11390353-11390372 | None:intergenic | 15.0% |
| !! | TATATTAAGTCAAATTTGAT+CGG | + | chr5_3:11391297-11391316 | Msa0798650:intron | 15.0% |
| !!! | GTTAAATATAAAGTGTTAAA+AGG | + | chr5_3:11391389-11391408 | Msa0798650:intron | 15.0% |
| !!! | GATCAAATCATTAAATTTTT+TGG | + | chr5_3:11391699-11391718 | Msa0798650:intron | 15.0% |
| !!! | ACATATAATTTTTTTGTGAA+GGG | - | chr5_3:11391999-11392018 | None:intergenic | 15.0% |
| !!! | TACATATAATTTTTTTGTGA+AGG | - | chr5_3:11392000-11392019 | None:intergenic | 15.0% |
| !! | GTATGATAATCTAATTAATA+TGG | - | chr5_3:11392169-11392188 | None:intergenic | 15.0% |
| !!! | TTTTTAATACTGCTAAAAAA+AGG | + | chr5_3:11392226-11392245 | Msa0798650:intron | 15.0% |
| !!! | TCTTCTTTTTTGTATTAAAA+TGG | - | chr5_3:11392315-11392334 | None:intergenic | 15.0% |
| !!! | TTACCTTTTTTGTATTAAAA+TGG | - | chr5_3:11392357-11392376 | None:intergenic | 15.0% |
| !! | TAAATGAAAAAGATCATTAT+GGG | - | chr5_3:11392421-11392440 | None:intergenic | 15.0% |
| !! | TTAAATGAAAAAGATCATTA+TGG | - | chr5_3:11392422-11392441 | None:intergenic | 15.0% |
| !!! | AGTTTTTATTTATTGAGAAT+TGG | - | chr5_3:11392705-11392724 | None:intergenic | 15.0% |
| !! | ATTTGTTTATTTATCTATCT+AGG | - | chr5_3:11392784-11392803 | None:intergenic | 15.0% |
| !! | TAACCATCTATATTATTAAT+AGG | + | chr5_3:11393084-11393103 | Msa0798650:intron | 15.0% |
| !!! | CTTTTTAATCAGTTTATTTA+TGG | - | chr5_3:11393142-11393161 | None:intergenic | 15.0% |
| !!! | ATAAACTGATTAAAAAGTAT+AGG | + | chr5_3:11393145-11393164 | Msa0798650:intron | 15.0% |
| !! | TAAAAAAGAAACTATGAAAA+GGG | + | chr5_3:11393572-11393591 | Msa0798650:intron | 15.0% |
| !!! | ATTCTTACTTTTATTTTTGT+TGG | + | chr5_3:11393718-11393737 | Msa0798650:intron | 15.0% |
| !! | TAAATGATTAAGGTTATTAT+AGG | - | chr5_3:11394565-11394584 | None:intergenic | 15.0% |
| !!! | AATGAAGTATTAAATGATTA+AGG | - | chr5_3:11394575-11394594 | None:intergenic | 15.0% |
| !! | TAAGAGATATATATGAATAA+CGG | - | chr5_3:11395699-11395718 | None:intergenic | 15.0% |
| !! | ATTATCATTATCTTCTTCAT+TGG | + | chr5_3:11388278-11388297 | Msa0798650:CDS | 20.0% |
| !! | AATAATTACAATATTCAAGG+TGG | + | chr5_3:11388381-11388400 | Msa0798650:CDS | 20.0% |
| !!! | TGTTGATGATTTAATTTGTA+CGG | - | chr5_3:11388435-11388454 | None:intergenic | 20.0% |
| !! | TAATAATTGGTATCCATTAA+TGG | - | chr5_3:11388490-11388509 | None:intergenic | 20.0% |
| !! | GATTATGACTTTGTAATAAT+TGG | - | chr5_3:11388503-11388522 | None:intergenic | 20.0% |
| !! | TTATTACAAAGTCATAATCA+AGG | + | chr5_3:11388504-11388523 | Msa0798650:CDS | 20.0% |
| !!! | AAAGTTAAGTGTTTTTCATA+TGG | - | chr5_3:11389144-11389163 | None:intergenic | 20.0% |
| !! | ATATACAATAATTCCATATC+TGG | - | chr5_3:11389196-11389215 | None:intergenic | 20.0% |
| !! | TCTTTACAAAATATATCAGT+TGG | - | chr5_3:11389540-11389559 | None:intergenic | 20.0% |
| !! | AATCAATCTATTTAATTGGT+AGG | + | chr5_3:11389681-11389700 | Msa0798650:intron | 20.0% |
| !! | TAGGTATATTTGTATATGTA+AGG | - | chr5_3:11389920-11389939 | None:intergenic | 20.0% |
| !!! | AAAATATTTCTATGATAGCT+AGG | - | chr5_3:11389939-11389958 | None:intergenic | 20.0% |
| !!! | TTTTAGCTTATAATAGAGAA+CGG | - | chr5_3:11390072-11390091 | None:intergenic | 20.0% |
| !!! | ATTTTGCTTATAATAGTCAT+CGG | + | chr5_3:11390184-11390203 | Msa0798650:intron | 20.0% |
| !! | TATCAACAATGTAATGATTA+AGG | - | chr5_3:11390394-11390413 | None:intergenic | 20.0% |
| !!! | TTATGTTTTTTTATGTGCAT+CGG | - | chr5_3:11390471-11390490 | None:intergenic | 20.0% |
| !! | AAAAACAAAATACAATCCAA+CGG | - | chr5_3:11390668-11390687 | None:intergenic | 20.0% |
| !! | ATAGTATAAATGGTTGATTA+GGG | - | chr5_3:11391217-11391236 | None:intergenic | 20.0% |
| !! | TATAGTATAAATGGTTGATT+AGG | - | chr5_3:11391218-11391237 | None:intergenic | 20.0% |
| !!! | TGTAAAATCAGTTTTCAAAA+TGG | - | chr5_3:11391328-11391347 | None:intergenic | 20.0% |
| !!! | TAAATATTTTTTGAGTCTGA+AGG | + | chr5_3:11391537-11391556 | Msa0798650:intron | 20.0% |
| !!! | ATAATAAAAATTTAGGGTGA+TGG | - | chr5_3:11391591-11391610 | None:intergenic | 20.0% |
| !! | GATGTATTTGATTCAATATT+TGG | + | chr5_3:11391677-11391696 | Msa0798650:intron | 20.0% |
| !!! | TTAGACAGTTTTAACTAAAT+AGG | + | chr5_3:11392025-11392044 | Msa0798650:intron | 20.0% |
| !!! | ACACCATTTTAATACAAAAA+AGG | + | chr5_3:11392351-11392370 | Msa0798650:intron | 20.0% |
| !! | AAATGAAAAAGATCATTATG+GGG | - | chr5_3:11392420-11392439 | None:intergenic | 20.0% |
| !!! | ATTCTATTATGTGAATCTTT+TGG | - | chr5_3:11392660-11392679 | None:intergenic | 20.0% |
| !!! | TTAACTTTTATTGCTTAAAC+CGG | + | chr5_3:11392970-11392989 | Msa0798650:intron | 20.0% |
| !! | CTACCTATTAATAATATAGA+TGG | - | chr5_3:11393090-11393109 | None:intergenic | 20.0% |
| !! | CATCTATATTATTAATAGGT+AGG | + | chr5_3:11393088-11393107 | Msa0798650:intron | 20.0% |
| !! | TTAAAACTATACAGTTTACA+TGG | - | chr5_3:11393513-11393532 | None:intergenic | 20.0% |
| !! | GTAAAAAAGAAACTATGAAA+AGG | + | chr5_3:11393571-11393590 | Msa0798650:intron | 20.0% |
| !! | AAAAAAGAAACTATGAAAAG+GGG | + | chr5_3:11393573-11393592 | Msa0798650:intron | 20.0% |
| !! | ACATTTATTTCCCATATTTA+TGG | - | chr5_3:11393932-11393951 | None:intergenic | 20.0% |
| !! | GATATGTAACGAAAAAAATT+AGG | - | chr5_3:11394355-11394374 | None:intergenic | 20.0% |
| !!! | AATTTTTTTCGTTACATATC+TGG | + | chr5_3:11394355-11394374 | Msa0798650:intron | 20.0% |
| !! | TCAAAATGTGACAATTAAAA+AGG | - | chr5_3:11394479-11394498 | None:intergenic | 20.0% |
| !! | TAAATATATAGGGCTAATAT+AGG | + | chr5_3:11394617-11394636 | Msa0798650:intron | 20.0% |
| !! | AAACTATAACAATAGTCATT+TGG | + | chr5_3:11395357-11395376 | Msa0798650:intron | 20.0% |
| !! | TGTTATTCTAACTTTAGTTA+AGG | + | chr5_3:11395491-11395510 | Msa0798650:intron | 20.0% |
| !!! | ATATATATGAATAACGGATT+TGG | - | chr5_3:11395693-11395712 | None:intergenic | 20.0% |
| !!! | ATTGATATCAGATCTTTTTT+GGG | - | chr5_3:11396028-11396047 | None:intergenic | 20.0% |
| !!! | TAGAGAAAGTTATTTTTATC+AGG | - | chr5_3:11396354-11396373 | None:intergenic | 20.0% |
| !! | CATTTAAATTCTTCCATTAT+AGG | + | chr5_3:11396390-11396409 | Msa0798650:three_prime_UTR | 20.0% |
| !! | TTTCCAAATTCTGGTAATTT+TGG | + | chr5_3:11388183-11388202 | Msa0798650:CDS | 25.0% |
| ! | TCTTTATGTGCTTATCAATT+TGG | + | chr5_3:11388914-11388933 | Msa0798650:intron | 25.0% |
| ! | CTTAGAATTCAATTGATACA+TGG | + | chr5_3:11388968-11388987 | Msa0798650:intron | 25.0% |
| !! | AATAAATTAGTTCTCTTCTC+CGG | + | chr5_3:11389450-11389469 | Msa0798650:intron | 25.0% |
| ! | TATGGACAATAATATATGCA+AGG | - | chr5_3:11389517-11389536 | None:intergenic | 25.0% |
| !! | ACAAAATATATCAGTTGGTA+TGG | - | chr5_3:11389535-11389554 | None:intergenic | 25.0% |
| ! | TATTTGAGAAAGAAAAAAGC+CGG | + | chr5_3:11389573-11389592 | Msa0798650:intron | 25.0% |
| !!! | TTTTGGGTTTTGTTTTAGTT+TGG | + | chr5_3:11389728-11389747 | Msa0798650:intron | 25.0% |
| ! | GTATATTTGTATATGTAAGG+TGG | - | chr5_3:11389917-11389936 | None:intergenic | 25.0% |
| !! | TTCATTGTGGATTTTAAATG+AGG | - | chr5_3:11390239-11390258 | None:intergenic | 25.0% |
| !! | TTTTACAATTGATAGGTTTC+AGG | - | chr5_3:11390267-11390286 | None:intergenic | 25.0% |
| !! | TTTCGACTTTTACAATTGAT+AGG | - | chr5_3:11390274-11390293 | None:intergenic | 25.0% |
| !! | CAAATATTTGTTGGTACATA+TGG | - | chr5_3:11390325-11390344 | None:intergenic | 25.0% |
| ! | CATATGTACCAACAAATATT+TGG | + | chr5_3:11390323-11390342 | Msa0798650:intron | 25.0% |
| !!! | CTTGAATCCTTCAATTTTTT+TGG | + | chr5_3:11390427-11390446 | Msa0798650:intron | 25.0% |
| ! | ACTTTGACCAAAAAAATTGA+AGG | - | chr5_3:11390437-11390456 | None:intergenic | 25.0% |
| ! | CAAATGAATATACTTGATAC+AGG | + | chr5_3:11390790-11390809 | Msa0798650:intron | 25.0% |
| ! | CGATGTAAGTATAGTATAAA+TGG | - | chr5_3:11391227-11391246 | None:intergenic | 25.0% |
| ! | TCATTTACAAGACAAAATTC+AGG | - | chr5_3:11391363-11391382 | None:intergenic | 25.0% |
| ! | TTACATTAAGCTCTCTATAA+AGG | - | chr5_3:11391508-11391527 | None:intergenic | 25.0% |
| ! | TCTCAAATATAAGTCAAAGT+TGG | + | chr5_3:11391642-11391661 | Msa0798650:intron | 25.0% |
| ! | AAATATTAGAGAGACTACAA+AGG | - | chr5_3:11391748-11391767 | None:intergenic | 25.0% |
| ! | CTAGTTTGAGTAAAATGTTA+AGG | - | chr5_3:11391781-11391800 | None:intergenic | 25.0% |
| !! | AACATTTTACTCAAACTAGA+CGG | + | chr5_3:11391782-11391801 | Msa0798650:intron | 25.0% |
| ! | ACAATGCATTAATATATGCA+AGG | + | chr5_3:11391946-11391965 | Msa0798650:intron | 25.0% |
| !! | GAGCATTTCATTTTACTTAA+CGG | - | chr5_3:11392293-11392312 | None:intergenic | 25.0% |
| ! | TTTGCCAAATTACACTAAAA+AGG | + | chr5_3:11392442-11392461 | Msa0798650:intron | 25.0% |
| !!! | GTTACCTTTTTAGTGTAATT+TGG | - | chr5_3:11392449-11392468 | None:intergenic | 25.0% |
| !! | ATAGTGATAGTGATGTATAT+TGG | - | chr5_3:11392736-11392755 | None:intergenic | 25.0% |
| ! | TAATATTTACTCGTTTGTTC+AGG | + | chr5_3:11392923-11392942 | Msa0798650:intron | 25.0% |
| ! | AGCAATAAAAGTTAAGGAAT+TGG | - | chr5_3:11392965-11392984 | None:intergenic | 25.0% |
| ! | GGTTTAAGCAATAAAAGTTA+AGG | - | chr5_3:11392971-11392990 | None:intergenic | 25.0% |
| !!! | CATTTCTTTTTTCCTTTCAT+GGG | - | chr5_3:11393269-11393288 | None:intergenic | 25.0% |
| !!! | ACATTTCTTTTTTCCTTTCA+TGG | - | chr5_3:11393270-11393289 | None:intergenic | 25.0% |
| ! | ATGTCTCTTTATATGGTTAA+GGG | + | chr5_3:11393322-11393341 | Msa0798650:intron | 25.0% |
| !!! | ACTTTGATGTCATTTTCTTT+TGG | + | chr5_3:11393349-11393368 | Msa0798650:intron | 25.0% |
| ! | TTACGTGAATATGTTTATGT+GGG | - | chr5_3:11393555-11393574 | None:intergenic | 25.0% |
| ! | TTTACGTGAATATGTTTATG+TGG | - | chr5_3:11393556-11393575 | None:intergenic | 25.0% |
| ! | AAAAAGAAACTATGAAAAGG+GGG | + | chr5_3:11393574-11393593 | Msa0798650:intron | 25.0% |
| ! | ATCTGAATTAAATTTACTGC+TGG | - | chr5_3:11393601-11393620 | None:intergenic | 25.0% |
| !! | AGATGTAACTTACATCATTT+TGG | + | chr5_3:11393617-11393636 | Msa0798650:intron | 25.0% |
| !! | GATGTAACTTACATCATTTT+GGG | + | chr5_3:11393618-11393637 | Msa0798650:intron | 25.0% |
| ! | TTTCTTAAAGAAGCAATGTT+TGG | + | chr5_3:11393665-11393684 | Msa0798650:intron | 25.0% |
| ! | ATTTATGGTTACCAATTGTA+TGG | - | chr5_3:11393917-11393936 | None:intergenic | 25.0% |
| !! | ACAATTGGTAACCATAAATA+TGG | + | chr5_3:11393918-11393937 | Msa0798650:intron | 25.0% |
| !! | CAATTGGTAACCATAAATAT+GGG | + | chr5_3:11393919-11393938 | Msa0798650:intron | 25.0% |
| ! | AAATATGGGAAATAAATGTG+TGG | + | chr5_3:11393933-11393952 | Msa0798650:intron | 25.0% |
| ! | TGTTTGTTTAGTCTAAATTG+AGG | + | chr5_3:11394040-11394059 | Msa0798650:intron | 25.0% |
| ! | GAAGTAAAATGTTTAACCTA+AGG | - | chr5_3:11394084-11394103 | None:intergenic | 25.0% |
| ! | GACACTTAAAAAGAAATGAA+TGG | - | chr5_3:11394154-11394173 | None:intergenic | 25.0% |
| ! | ACAAATCTAAGCTTGTATTT+CGG | - | chr5_3:11394227-11394246 | None:intergenic | 25.0% |
| !!! | TGCACTTATTTTCATAAAGA+CGG | + | chr5_3:11394281-11394300 | Msa0798650:intron | 25.0% |
| ! | ATAAAATATCGTTTGAGCTT+TGG | - | chr5_3:11394324-11394343 | None:intergenic | 25.0% |
| !!! | AGTAAAAGTATTTGTTGTCT+TGG | - | chr5_3:11394515-11394534 | None:intergenic | 25.0% |
| ! | TCTCTCTGCAATAAATATAT+AGG | + | chr5_3:11394606-11394625 | Msa0798650:intron | 25.0% |
| ! | CTCTCTGCAATAAATATATA+GGG | + | chr5_3:11394607-11394626 | Msa0798650:intron | 25.0% |
| !! | GTTCAAAGTATCATTAAATG+TGG | - | chr5_3:11394648-11394667 | None:intergenic | 25.0% |
| ! | TGCAAAAGTGACAATTATAA+AGG | + | chr5_3:11394704-11394723 | Msa0798650:intron | 25.0% |
| ! | AAGTGACAATTATAAAGGAA+CGG | + | chr5_3:11394709-11394728 | Msa0798650:intron | 25.0% |
| !!! | AATTTCCTAGCCTTATATTT+AGG | + | chr5_3:11394804-11394823 | Msa0798650:intron | 25.0% |
| ! | TTATAAAACCGGCAAAATTA+AGG | + | chr5_3:11395235-11395254 | Msa0798650:intron | 25.0% |
| ! | TATAAAACCGGCAAAATTAA+GGG | + | chr5_3:11395236-11395255 | Msa0798650:intron | 25.0% |
| ! | TAAAAATTGAACACGAAGTT+CGG | - | chr5_3:11395399-11395418 | None:intergenic | 25.0% |
| !!! | TTGATATCAGATCTTTTTTG+GGG | - | chr5_3:11396027-11396046 | None:intergenic | 25.0% |
| !!! | CATTGATATCAGATCTTTTT+TGG | - | chr5_3:11396029-11396048 | None:intergenic | 25.0% |
| !! | ACTTTCTCTATTAGAGATTT+TGG | + | chr5_3:11396364-11396383 | Msa0798650:exon | 25.0% |
| ! | GCATCTTAAAATTCCTATAA+TGG | - | chr5_3:11396406-11396425 | None:intergenic | 25.0% |
| !! | AATCCAAGTTTCTTTGGTTT+TGG | - | chr5_3:11387621-11387640 | None:intergenic | 30.0% |
| TTGAACAATCCAAGTTTCTT+TGG | - | chr5_3:11387627-11387646 | None:intergenic | 30.0% | |
| TTGAATTTATCAGAAGGAGA+AGG | + | chr5_3:11387778-11387797 | Msa0798650:CDS | 30.0% | |
| TTGTTTGATGAGATTGAGAA+GGG | - | chr5_3:11388068-11388087 | None:intergenic | 30.0% | |
| !!! | GTTGAAGAATTTTGATGATG+AGG | - | chr5_3:11388117-11388136 | None:intergenic | 30.0% |
| ! | AAACCTTGCAAGGTATTATT+AGG | - | chr5_3:11388165-11388184 | None:intergenic | 30.0% |
| TGTCCAAAATTACCAGAATT+TGG | - | chr5_3:11388189-11388208 | None:intergenic | 30.0% | |
| ! | GTAATTTTGGACAATTCACA+TGG | + | chr5_3:11388196-11388215 | Msa0798650:CDS | 30.0% |
| AATAGTACTACTACTCAAGA+AGG | + | chr5_3:11388219-11388238 | Msa0798650:CDS | 30.0% | |
| GCATTGAATTTACAATTGCA+AGG | + | chr5_3:11388456-11388475 | Msa0798650:CDS | 30.0% | |
| TTGAATTTACAATTGCAAGG+AGG | + | chr5_3:11388459-11388478 | Msa0798650:CDS | 30.0% | |
| ATAGGATTGAACATCAAAGA+AGG | + | chr5_3:11388757-11388776 | Msa0798650:CDS | 30.0% | |
| TGAAGAAAAATATATGGGGA+GGG | - | chr5_3:11388869-11388888 | None:intergenic | 30.0% | |
| ATGAAGAAAAATATATGGGG+AGG | - | chr5_3:11388870-11388889 | None:intergenic | 30.0% | |
| ATTATTTATGCGGTAAGATG+TGG | + | chr5_3:11389256-11389275 | Msa0798650:intron | 30.0% | |
| ACAATAATATATGCAAGGTC+CGG | - | chr5_3:11389512-11389531 | None:intergenic | 30.0% | |
| CAATCTATTTAATTGGTAGG+AGG | + | chr5_3:11389684-11389703 | Msa0798650:intron | 30.0% | |
| !! | AAATGAGAGTACTAACCATT+AGG | + | chr5_3:11389762-11389781 | Msa0798650:intron | 30.0% |
| TGCTACGTTACTTATTGATA+TGG | - | chr5_3:11389870-11389889 | None:intergenic | 30.0% | |
| TTGTATATGTAAGGTGGAAA+TGG | - | chr5_3:11389911-11389930 | None:intergenic | 30.0% | |
| CAAGTGAGATATCTTAACAA+AGG | - | chr5_3:11389972-11389991 | None:intergenic | 30.0% | |
| ATAGAGAACGGATAGAATAA+GGG | - | chr5_3:11390060-11390079 | None:intergenic | 30.0% | |
| AATAGAGAACGGATAGAATA+AGG | - | chr5_3:11390061-11390080 | None:intergenic | 30.0% | |
| TACTGAATGAATGATGTATG+CGG | + | chr5_3:11390110-11390129 | Msa0798650:intron | 30.0% | |
| ! | TGGATTTTAAATGAGGTTGA+TGG | - | chr5_3:11390232-11390251 | None:intergenic | 30.0% |
| ! | GTTTCAGGTAAATTTCATTG+TGG | - | chr5_3:11390252-11390271 | None:intergenic | 30.0% |
| TTGGGTTACCAAATATTTGT+TGG | - | chr5_3:11390334-11390353 | None:intergenic | 30.0% | |
| ATGAATAGGAAAAAGCTTAG+TGG | + | chr5_3:11390601-11390620 | Msa0798650:intron | 30.0% | |
| ATGAATATACTTGATACAGG+TGG | + | chr5_3:11390793-11390812 | Msa0798650:intron | 30.0% | |
| CTATTGTGAACAAATGCAAA+TGG | + | chr5_3:11390832-11390851 | Msa0798650:CDS | 30.0% | |
| AACTCATTTGATGTGATGAT+GGG | + | chr5_3:11390860-11390879 | Msa0798650:CDS | 30.0% | |
| GACTAAAACTCAGACTTAAT+CGG | + | chr5_3:11391439-11391458 | Msa0798650:intron | 30.0% | |
| !! | AGGTCTTTCCTATTTTAGAT+TGG | + | chr5_3:11391557-11391576 | Msa0798650:intron | 30.0% |
| !! | GGTCTTTCCTATTTTAGATT+GGG | + | chr5_3:11391558-11391577 | Msa0798650:intron | 30.0% |
| !! | AAAAATTTAGGGTGATGGAA+TGG | - | chr5_3:11391586-11391605 | None:intergenic | 30.0% |
| !!! | TTGTGAAGGGCTTATTTTTT+TGG | - | chr5_3:11391986-11392005 | None:intergenic | 30.0% |
| AGTTTGAACTTGATGTATGT+AGG | + | chr5_3:11392096-11392115 | Msa0798650:intron | 30.0% | |
| AAAAGGTAACCACAATACTA+AGG | + | chr5_3:11392459-11392478 | Msa0798650:intron | 30.0% | |
| TGGATACGACACATAAATTA+TGG | - | chr5_3:11392571-11392590 | None:intergenic | 30.0% | |
| TTTCTCTAAACGATGTCTTA+TGG | - | chr5_3:11392591-11392610 | None:intergenic | 30.0% | |
| CGTCATTAAAAACAATTCAC+AGG | - | chr5_3:11392867-11392886 | None:intergenic | 30.0% | |
| AGTTAAGGAATTGGAGATTA+TGG | - | chr5_3:11392956-11392975 | None:intergenic | 30.0% | |
| ! | AAATGTTTGAAGCAGAGTTA+AGG | + | chr5_3:11393284-11393303 | Msa0798650:intron | 30.0% |
| ! | AATGTTTGAAGCAGAGTTAA+GGG | + | chr5_3:11393285-11393304 | Msa0798650:intron | 30.0% |
| AGCTTTCATGTCTCTTTATA+TGG | + | chr5_3:11393315-11393334 | Msa0798650:intron | 30.0% | |
| CATGTCTCTTTATATGGTTA+AGG | + | chr5_3:11393321-11393340 | Msa0798650:intron | 30.0% | |
| !!! | ACTTACATCATTTTGGGTTT+TGG | + | chr5_3:11393624-11393643 | Msa0798650:intron | 30.0% |
| TCACAATTAATTATGCCATG+AGG | - | chr5_3:11393752-11393771 | None:intergenic | 30.0% | |
| TAAGTAGTGAAGCAAGAAAT+GGG | + | chr5_3:11393789-11393808 | Msa0798650:intron | 30.0% | |
| !!! | GACATAAAAATGTGCTGTTT+TGG | + | chr5_3:11393811-11393830 | Msa0798650:intron | 30.0% |
| ! | ATCAAATTTTGTCGAGTACA+AGG | - | chr5_3:11394121-11394140 | None:intergenic | 30.0% |
| !!! | TTTCTGGATTTTGGTTTATG+TGG | - | chr5_3:11394414-11394433 | None:intergenic | 30.0% |
| GACAATTAAAAAGGAACAGA+GGG | - | chr5_3:11394470-11394489 | None:intergenic | 30.0% | |
| TGACAATTAAAAAGGAACAG+AGG | - | chr5_3:11394471-11394490 | None:intergenic | 30.0% | |
| ATAGTGTCATGAGTAACTAA+TGG | + | chr5_3:11394744-11394763 | Msa0798650:intron | 30.0% | |
| TACATGTAGGCCTAAATATA+AGG | - | chr5_3:11394817-11394836 | None:intergenic | 30.0% | |
| ATAAAACCGGCAAAATTAAG+GGG | + | chr5_3:11395237-11395256 | Msa0798650:intron | 30.0% | |
| !! | TAACAATAGTCATTTGGTGT+CGG | + | chr5_3:11395363-11395382 | Msa0798650:intron | 30.0% |
| TAGAGTAAGCAAATAAGTCT+TGG | - | chr5_3:11395461-11395480 | None:intergenic | 30.0% | |
| AATCCATATGCATAACACAT+AGG | - | chr5_3:11395543-11395562 | None:intergenic | 30.0% | |
| ATGTGTTATGCATATGGATT+TGG | + | chr5_3:11395543-11395562 | Msa0798650:intron | 30.0% | |
| TACACAGATAATTCATACAC+CGG | - | chr5_3:11395756-11395775 | None:intergenic | 30.0% | |
| TATCTGTGTATTGTGTTGAA+TGG | + | chr5_3:11395766-11395785 | Msa0798650:intron | 30.0% | |
| ! | TCTTCTTCTTCTTCTTTTTC+AGG | + | chr5_3:11395810-11395829 | Msa0798650:intron | 30.0% |
| !!! | TTCTTTTTCAGGTATCAAAC+TGG | + | chr5_3:11395821-11395840 | Msa0798650:intron | 30.0% |
| ! | TATTGATTGCAACTAGTGAA+GGG | - | chr5_3:11396065-11396084 | None:intergenic | 30.0% |
| ! | TTATTGATTGCAACTAGTGA+AGG | - | chr5_3:11396066-11396085 | None:intergenic | 30.0% |
| TTGGATCATCAACTCTTATT+AGG | + | chr5_3:11396265-11396284 | Msa0798650:CDS | 30.0% | |
| TCATCAACTCTTATTAGGTT+TGG | + | chr5_3:11396270-11396289 | Msa0798650:CDS | 30.0% | |
| CATCAACTCTTATTAGGTTT+GGG | + | chr5_3:11396271-11396290 | Msa0798650:CDS | 30.0% | |
| GAAGAAGAAGAAGAAGGAAA+TGG | - | chr5_3:11387577-11387596 | None:intergenic | 35.0% | |
| ACAATGGAAGAAGAAGAAGA+AGG | - | chr5_3:11387583-11387602 | None:intergenic | 35.0% | |
| GTGTGTCTTCAAGTAAACAA+TGG | - | chr5_3:11387599-11387618 | None:intergenic | 35.0% | |
| ACACCAAAACCAAAGAAACT+TGG | + | chr5_3:11387615-11387634 | Msa0798650:CDS | 35.0% | |
| ! | GATTGCTTGCTGATAATCTT+GGG | - | chr5_3:11387665-11387684 | None:intergenic | 35.0% |
| ! | AGATTGCTTGCTGATAATCT+TGG | - | chr5_3:11387666-11387685 | None:intergenic | 35.0% |
| GATTATCAGCAAGCAATCTT+CGG | + | chr5_3:11387667-11387686 | Msa0798650:CDS | 35.0% | |
| CAAGGGTTGAATTTATCAGA+AGG | + | chr5_3:11387772-11387791 | Msa0798650:CDS | 35.0% | |
| TCTAACAATTCAGCTGTTGA+AGG | - | chr5_3:11387868-11387887 | None:intergenic | 35.0% | |
| ! | CAATCATTTTCTGAACCTGT+TGG | - | chr5_3:11387943-11387962 | None:intergenic | 35.0% |
| CAACAGGTTCAGAAAATGAT+TGG | + | chr5_3:11387941-11387960 | Msa0798650:CDS | 35.0% | |
| GGTTCAGAAAATGATTGGTA+TGG | + | chr5_3:11387946-11387965 | Msa0798650:CDS | 35.0% | |
| TGGTATGGTAATAACAGACA+AGG | + | chr5_3:11387961-11387980 | Msa0798650:CDS | 35.0% | |
| GGTATGGTAATAACAGACAA+GGG | + | chr5_3:11387962-11387981 | Msa0798650:CDS | 35.0% | |
| GTTCATGAGAAAAAGTTGCA+TGG | - | chr5_3:11388046-11388065 | None:intergenic | 35.0% | |
| GTTGTTTGATGAGATTGAGA+AGG | - | chr5_3:11388069-11388088 | None:intergenic | 35.0% | |
| !!! | GAAGAATTTTGATGATGAGG+TGG | - | chr5_3:11388114-11388133 | None:intergenic | 35.0% |
| AGGTATTATTAGGAGGGTTA+GGG | - | chr5_3:11388155-11388174 | None:intergenic | 35.0% | |
| ! | AAGGTATTATTAGGAGGGTT+AGG | - | chr5_3:11388156-11388175 | None:intergenic | 35.0% |
| ! | CTTGCAAGGTATTATTAGGA+GGG | - | chr5_3:11388161-11388180 | None:intergenic | 35.0% |
| AGAATTTGGAAAACCTTGCA+AGG | - | chr5_3:11388175-11388194 | None:intergenic | 35.0% | |
| ! | TTGCAAGGTTTTCCAAATTC+TGG | + | chr5_3:11388174-11388193 | Msa0798650:CDS | 35.0% |
| TACAATATTCAAGGTGGAAG+TGG | + | chr5_3:11388387-11388406 | Msa0798650:CDS | 35.0% | |
| TACGGATATGATGAAGAAGA+TGG | - | chr5_3:11388417-11388436 | None:intergenic | 35.0% | |
| AATTTACAATTGCAAGGAGG+AGG | + | chr5_3:11388462-11388481 | Msa0798650:CDS | 35.0% | |
| ATTTACAATTGCAAGGAGGA+GGG | + | chr5_3:11388463-11388482 | Msa0798650:CDS | 35.0% | |
| CAAAGTCATAATCAAGGTCA+AGG | + | chr5_3:11388510-11388529 | Msa0798650:CDS | 35.0% | |
| CATAATCAAGGTCAAGGATA+TGG | + | chr5_3:11388516-11388535 | Msa0798650:CDS | 35.0% | |
| TCTTGAAGCAATTCTTGAGT+AGG | - | chr5_3:11388585-11388604 | None:intergenic | 35.0% | |
| CATTGGAGGAACAATTGTTA+GGG | - | chr5_3:11388674-11388693 | None:intergenic | 35.0% | |
| ACATTGGAGGAACAATTGTT+AGG | - | chr5_3:11388675-11388694 | None:intergenic | 35.0% | |
| AACAATTGTTCCTCCAATGT+TGG | + | chr5_3:11388675-11388694 | Msa0798650:CDS | 35.0% | |
| ATTAGAATCACCAACATTGG+AGG | - | chr5_3:11388688-11388707 | None:intergenic | 35.0% | |
| AGGATTAGAATCACCAACAT+TGG | - | chr5_3:11388691-11388710 | None:intergenic | 35.0% | |
| ! | GTGTCTTTTGATGAAGAAGA+AGG | - | chr5_3:11388711-11388730 | None:intergenic | 35.0% |
| GATTGAACATCAAAGAAGGA+AGG | + | chr5_3:11388761-11388780 | Msa0798650:CDS | 35.0% | |
| AAGAAAAATATATGGGGAGG+GGG | - | chr5_3:11388867-11388886 | None:intergenic | 35.0% | |
| GAAGAAAAATATATGGGGAG+GGG | - | chr5_3:11388868-11388887 | None:intergenic | 35.0% | |
| CAATAATATATGCAAGGTCC+GGG | - | chr5_3:11389511-11389530 | None:intergenic | 35.0% | |
| TCTATTTAATTGGTAGGAGG+TGG | + | chr5_3:11389687-11389706 | Msa0798650:intron | 35.0% | |
| CTATTTAATTGGTAGGAGGT+GGG | + | chr5_3:11389688-11389707 | Msa0798650:intron | 35.0% | |
| TGGTTAGTACTCTCATTTCA+TGG | - | chr5_3:11389760-11389779 | None:intergenic | 35.0% | |
| GTTAAGATATCTCACTTGAC+AGG | + | chr5_3:11389974-11389993 | Msa0798650:intron | 35.0% | |
| AGTGCGAAAAAATCTAAGTG+CGG | - | chr5_3:11390757-11390776 | None:intergenic | 35.0% | |
| GAACTCATTTGATGTGATGA+TGG | + | chr5_3:11390859-11390878 | Msa0798650:CDS | 35.0% | |
| !!! | TTTGATGTGATGATGGGTTT+TGG | + | chr5_3:11390866-11390885 | Msa0798650:CDS | 35.0% |
| ! | AAGCAATGTCTCGACATTTT+CGG | + | chr5_3:11390921-11390940 | Msa0798650:CDS | 35.0% |
| AAGCAAAGTTGTGAGTTACT+AGG | + | chr5_3:11390974-11390993 | Msa0798650:CDS | 35.0% | |
| TTCAAGTACTTTAAGCCTAG+GGG | - | chr5_3:11391041-11391060 | None:intergenic | 35.0% | |
| GTTCAAGTACTTTAAGCCTA+GGG | - | chr5_3:11391042-11391061 | None:intergenic | 35.0% | |
| TGTTCAAGTACTTTAAGCCT+AGG | - | chr5_3:11391043-11391062 | None:intergenic | 35.0% | |
| ! | GAAATGCTCTTTGTTGTCTT+AGG | - | chr5_3:11391069-11391088 | None:intergenic | 35.0% |
| AAAACATTGACAGAACGATC+AGG | - | chr5_3:11391142-11391161 | None:intergenic | 35.0% | |
| !! | GCTCTCTATAAAGGTACTAA+CGG | - | chr5_3:11391499-11391518 | None:intergenic | 35.0% |
| ! | AATGGTGCCCAATCTAAAAT+AGG | - | chr5_3:11391568-11391587 | None:intergenic | 35.0% |
| ! | TGAGTTTAACTCAGTTGGTA+AGG | + | chr5_3:11391923-11391942 | Msa0798650:intron | 35.0% |
| GCATTAATATATGCAAGGTC+CGG | + | chr5_3:11391951-11391970 | Msa0798650:intron | 35.0% | |
| CATTAATATATGCAAGGTCC+GGG | + | chr5_3:11391952-11391971 | Msa0798650:intron | 35.0% | |
| ATTAATATATGCAAGGTCCG+GGG | + | chr5_3:11391953-11391972 | Msa0798650:intron | 35.0% | |
| !!! | TGAAGGGCTTATTTTTTTGG+TGG | - | chr5_3:11391983-11392002 | None:intergenic | 35.0% |
| !! | TACCGACTTAAAAAAGCCAA+CGG | - | chr5_3:11392127-11392146 | None:intergenic | 35.0% |
| ATCACAGTACCTTAGTATTG+TGG | - | chr5_3:11392471-11392490 | None:intergenic | 35.0% | |
| ! | AGGTACTGTGATCATTAACA+AGG | + | chr5_3:11392479-11392498 | Msa0798650:intron | 35.0% |
| TTAACAAGGAAAAAAGCAGC+AGG | + | chr5_3:11392493-11392512 | Msa0798650:intron | 35.0% | |
| TAACAAGGAAAAAAGCAGCA+GGG | + | chr5_3:11392494-11392513 | Msa0798650:intron | 35.0% | |
| ACAATTCACAGGATCTATCT+AGG | - | chr5_3:11392856-11392875 | None:intergenic | 35.0% | |
| CTCTTTATATGGTTAAGGGA+AGG | + | chr5_3:11393326-11393345 | Msa0798650:intron | 35.0% | |
| ! | TTTCTTTTGGTCTCTTTCTC+AGG | + | chr5_3:11393362-11393381 | Msa0798650:intron | 35.0% |
| TGATGCAGATAAGCATCTAT+TGG | + | chr5_3:11393393-11393412 | Msa0798650:CDS | 35.0% | |
| TTGTTGGAACATTTACCTCA+TGG | + | chr5_3:11393734-11393753 | Msa0798650:intron | 35.0% | |
| GTAAGTAGTGAAGCAAGAAA+TGG | + | chr5_3:11393788-11393807 | Msa0798650:intron | 35.0% | |
| AGTCAAGAGAGTGAGTTAAT+TGG | - | chr5_3:11393839-11393858 | None:intergenic | 35.0% | |
| TGTGAGAGACAATGTCAAAA+AGG | - | chr5_3:11393874-11393893 | None:intergenic | 35.0% | |
| TGGTTACCAATTGTATGGTT+GGG | - | chr5_3:11393912-11393931 | None:intergenic | 35.0% | |
| ATGGTTACCAATTGTATGGT+TGG | - | chr5_3:11393913-11393932 | None:intergenic | 35.0% | |
| TGGGAAATAAATGTGTGGTT+TGG | + | chr5_3:11393938-11393957 | Msa0798650:intron | 35.0% | |
| GGGAAATAAATGTGTGGTTT+GGG | + | chr5_3:11393939-11393958 | Msa0798650:intron | 35.0% | |
| GGAAATAAATGTGTGGTTTG+GGG | + | chr5_3:11393940-11393959 | Msa0798650:intron | 35.0% | |
| !! | GAAAGCGTAATATGTGCTTT+TGG | + | chr5_3:11393975-11393994 | Msa0798650:intron | 35.0% |
| !! | CTAAGGTCAAAGAGTATTTG+AGG | - | chr5_3:11394067-11394086 | None:intergenic | 35.0% |
| CTCAAATACTCTTTGACCTT+AGG | + | chr5_3:11394065-11394084 | Msa0798650:intron | 35.0% | |
| !!! | TGTCGAGTACAAGGTTTTTT+TGG | - | chr5_3:11394112-11394131 | None:intergenic | 35.0% |
| ! | TAAGCTTGTATTTCGGTTTG+AGG | - | chr5_3:11394220-11394239 | None:intergenic | 35.0% |
| !! | GCAAGAAAGTTTCTGGATTT+TGG | - | chr5_3:11394423-11394442 | None:intergenic | 35.0% |
| TGACAATTATAAAGGAACGG+AGG | + | chr5_3:11394712-11394731 | Msa0798650:intron | 35.0% | |
| GACAATTATAAAGGAACGGA+GGG | + | chr5_3:11394713-11394732 | Msa0798650:intron | 35.0% | |
| TATAGATGACCTCTTAAGTC+TGG | - | chr5_3:11394876-11394895 | None:intergenic | 35.0% | |
| GGCTTAGCTCATTATAAAAC+CGG | + | chr5_3:11395224-11395243 | Msa0798650:intron | 35.0% | |
| TTTAGCCGTCAATTATACTC+GGG | - | chr5_3:11395271-11395290 | None:intergenic | 35.0% | |
| GTTTAGCCGTCAATTATACT+CGG | - | chr5_3:11395272-11395291 | None:intergenic | 35.0% | |
| !!! | ACAAGCTTTTTTAAGCGTTG+TGG | - | chr5_3:11395307-11395326 | None:intergenic | 35.0% |
| TGAGATTTGTAAAACTCCAC+CGG | + | chr5_3:11395734-11395753 | Msa0798650:intron | 35.0% | |
| ! | AAACTGGTTCATAAATGCCA+GGG | + | chr5_3:11395837-11395856 | Msa0798650:CDS | 35.0% |
| CTGCTTCATTAAGTTCTTGT+TGG | - | chr5_3:11395897-11395916 | None:intergenic | 35.0% | |
| ACAAGAACTTAATGAAGCAG+AGG | + | chr5_3:11395897-11395916 | Msa0798650:CDS | 35.0% | |
| !!! | ATATCAGATCTTTTTTGGGG+TGG | - | chr5_3:11396024-11396043 | None:intergenic | 35.0% |
| GTTGCAGAAGATTATGAAAC+AGG | + | chr5_3:11396234-11396253 | Msa0798650:CDS | 35.0% | |
| ! | TATGAAACAGGTTCTGACAT+TGG | + | chr5_3:11396246-11396265 | Msa0798650:CDS | 35.0% |
| AGATCCAAAGGGACAAAGTT+AGG | + | chr5_3:11387743-11387762 | Msa0798650:CDS | 40.0% | |
| ACAAAGTTAGGCTGCTACAA+GGG | + | chr5_3:11387755-11387774 | Msa0798650:CDS | 40.0% | |
| !! | TTTTCTGAACCTGTTGGTTG+TGG | - | chr5_3:11387937-11387956 | None:intergenic | 40.0% |
| !!! | GAATTTTGATGATGAGGTGG+TGG | - | chr5_3:11388111-11388130 | None:intergenic | 40.0% |
| ! | CCTTGCAAGGTATTATTAGG+AGG | - | chr5_3:11388162-11388181 | None:intergenic | 40.0% |
| CCTCCTAATAATACCTTGCA+AGG | + | chr5_3:11388159-11388178 | Msa0798650:CDS | 40.0% | |
| AGTACTACTACTCAAGAAGG+AGG | + | chr5_3:11388222-11388241 | Msa0798650:CDS | 40.0% | |
| AATATTCAAGGTGGAAGTGG+AGG | + | chr5_3:11388390-11388409 | Msa0798650:CDS | 40.0% | |
| ! | CTTCAAGAGTTTTGCAGTGT+TGG | + | chr5_3:11388597-11388616 | Msa0798650:CDS | 40.0% |
| !! | AAGAGTTTTGCAGTGTTGGA+AGG | + | chr5_3:11388601-11388620 | Msa0798650:CDS | 40.0% |
| !! | AGAGTTTTGCAGTGTTGGAA+GGG | + | chr5_3:11388602-11388621 | Msa0798650:CDS | 40.0% |
| ATTACATGCCTCATCAAGCA+TGG | - | chr5_3:11388799-11388818 | None:intergenic | 40.0% | |
| TCTCCTTCTCTCTTCATCAA+GGG | + | chr5_3:11388832-11388851 | Msa0798650:intron | 40.0% | |
| AGAAAAATATATGGGGAGGG+GGG | - | chr5_3:11388866-11388885 | None:intergenic | 40.0% | |
| CCATATCTGGTTAGATGCAT+GGG | - | chr5_3:11389183-11389202 | None:intergenic | 40.0% | |
| TCCATATCTGGTTAGATGCA+TGG | - | chr5_3:11389184-11389203 | None:intergenic | 40.0% | |
| CACCAAAAAAAGATACCAGC+CGG | - | chr5_3:11389472-11389491 | None:intergenic | 40.0% | |
| !!! | CTGGTATCTTTTTTTGGTGG+TGG | + | chr5_3:11389473-11389492 | Msa0798650:intron | 40.0% |
| TAGGAATATCCTCCTTGCAT+AGG | + | chr5_3:11389605-11389624 | Msa0798650:intron | 40.0% | |
| !! | CTTGCATAGGATTAGTTGGT+GGG | + | chr5_3:11389618-11389637 | Msa0798650:intron | 40.0% |
| !! | TTGCATAGGATTAGTTGGTG+GGG | + | chr5_3:11389619-11389638 | Msa0798650:intron | 40.0% |
| GACGTATTCTCTTCTCCTAA+TGG | - | chr5_3:11389780-11389799 | None:intergenic | 40.0% | |
| CTCACTCACTTGCTCAATAT+TGG | + | chr5_3:11389840-11389859 | Msa0798650:intron | 40.0% | |
| ! | CATCATTCGTTGCTATTCGT+CGG | - | chr5_3:11390640-11390659 | None:intergenic | 40.0% |
| TATACTTGATACAGGTGGAC+AGG | + | chr5_3:11390798-11390817 | Msa0798650:intron | 40.0% | |
| ! | TTTTGTGCTAGTGCTGTGTA+TGG | - | chr5_3:11390902-11390921 | None:intergenic | 40.0% |
| GAGTTACTAGGAGAGAAAGA+AGG | + | chr5_3:11390986-11391005 | Msa0798650:CDS | 40.0% | |
| !! | ACAAAGAGCATTTCACCAGA+TGG | + | chr5_3:11391075-11391094 | Msa0798650:CDS | 40.0% |
| !! | CAAAGAGCATTTCACCAGAT+GGG | + | chr5_3:11391076-11391095 | Msa0798650:CDS | 40.0% |
| ATTTCACCAGATGGGTATGA+TGG | + | chr5_3:11391084-11391103 | Msa0798650:CDS | 40.0% | |
| !! | GTATGATGGATCAAGAAGCT+TGG | + | chr5_3:11391098-11391117 | Msa0798650:CDS | 40.0% |
| !!! | CTGTCAATGTTTTGAGAGCT+TGG | + | chr5_3:11391149-11391168 | Msa0798650:CDS | 40.0% |
| GAAAAGACGCGATAACTTAC+GGG | - | chr5_3:11391195-11391214 | None:intergenic | 40.0% | |
| GGAAAAGACGCGATAACTTA+CGG | - | chr5_3:11391196-11391215 | None:intergenic | 40.0% | |
| CTTCGTGAGTTTAACTCAGT+TGG | + | chr5_3:11391918-11391937 | Msa0798650:intron | 40.0% | |
| TTAATATATGCAAGGTCCGG+GGG | + | chr5_3:11391954-11391973 | Msa0798650:intron | 40.0% | |
| !!! | AGGGCTTATTTTTTTGGTGG+TGG | - | chr5_3:11391980-11391999 | None:intergenic | 40.0% |
| !!! | CACCGTTGGCTTTTTTAAGT+CGG | + | chr5_3:11392122-11392141 | Msa0798650:intron | 40.0% |
| ACCAAAAAGTAGAGCTAGCT+AGG | + | chr5_3:11392376-11392395 | Msa0798650:intron | 40.0% | |
| !!! | ACCTAGCTAGCTCTACTTTT+TGG | - | chr5_3:11392380-11392399 | None:intergenic | 40.0% |
| ATGTTGTCTTACCAGCAGAA+AGG | + | chr5_3:11392634-11392653 | Msa0798650:intron | 40.0% | |
| GAAGTTGCATATAGCTCAAC+CGG | - | chr5_3:11392992-11393011 | None:intergenic | 40.0% | |
| TGTACACTGATCATGATCAC+TGG | - | chr5_3:11393172-11393191 | None:intergenic | 40.0% | |
| CTGACATAGCAGAAGTAAAG+AGG | - | chr5_3:11393203-11393222 | None:intergenic | 40.0% | |
| ACTTCTGCTATGTCAGCAAT+AGG | + | chr5_3:11393207-11393226 | Msa0798650:intron | 40.0% | |
| AGATGCTTATCTGCATCACT+TGG | - | chr5_3:11393391-11393410 | None:intergenic | 40.0% | |
| ATCTATTGGCACGACAAACT+GGG | + | chr5_3:11393407-11393426 | Msa0798650:CDS | 40.0% | |
| GTATACTCTACACTGCATTG+TGG | - | chr5_3:11393468-11393487 | None:intergenic | 40.0% | |
| ! | AAATGTGTGGTTTGGGGATT+TGG | + | chr5_3:11393946-11393965 | Msa0798650:intron | 40.0% |
| GATGCATGCAAGAAAGTTTC+TGG | - | chr5_3:11394430-11394449 | None:intergenic | 40.0% | |
| GTAGGCCTAAATATAAGGCT+AGG | - | chr5_3:11394812-11394831 | None:intergenic | 40.0% | |
| ! | CAGCAGTTTGCTTCTACAAA+AGG | - | chr5_3:11394915-11394934 | None:intergenic | 40.0% |
| TAGACTATGATTAGGCACCA+AGG | - | chr5_3:11395005-11395024 | None:intergenic | 40.0% | |
| TGCCTAATCATAGTCTAGCA+TGG | + | chr5_3:11395008-11395027 | Msa0798650:intron | 40.0% | |
| CACCATGCTAGACTATGATT+AGG | - | chr5_3:11395013-11395032 | None:intergenic | 40.0% | |
| TGACGGCTAAACTTGTAAAC+CGG | + | chr5_3:11395280-11395299 | Msa0798650:intron | 40.0% | |
| !!! | CTTTTTTAAGCGTTGTGGTC+CGG | - | chr5_3:11395302-11395321 | None:intergenic | 40.0% |
| TATGCATAACACATAGGAGC+TGG | - | chr5_3:11395537-11395556 | None:intergenic | 40.0% | |
| GCTCCTATGTGTTATGCATA+TGG | + | chr5_3:11395537-11395556 | Msa0798650:intron | 40.0% | |
| TCAGACTGACCCATTAAGAT+TGG | + | chr5_3:11395594-11395613 | Msa0798650:intron | 40.0% | |
| ACTGACCCATTAAGATTGGA+CGG | + | chr5_3:11395598-11395617 | Msa0798650:intron | 40.0% | |
| TTGGACCGTCCAATCTTAAT+GGG | - | chr5_3:11395606-11395625 | None:intergenic | 40.0% | |
| TTTGGACCGTCCAATCTTAA+TGG | - | chr5_3:11395607-11395626 | None:intergenic | 40.0% | |
| TTGGAGTGCATTTGATTGGA+CGG | - | chr5_3:11395674-11395693 | None:intergenic | 40.0% | |
| ! | GGATTTGGAGTGCATTTGAT+TGG | - | chr5_3:11395678-11395697 | None:intergenic | 40.0% |
| ACAGATAATTCATACACCGG+TGG | - | chr5_3:11395753-11395772 | None:intergenic | 40.0% | |
| ! | CAAACTGGTTCATAAATGCC+AGG | + | chr5_3:11395836-11395855 | Msa0798650:CDS | 40.0% |
| TAAATGCCAGGGTTAGATTG+TGG | + | chr5_3:11395848-11395867 | Msa0798650:CDS | 40.0% | |
| GGTTAGATTGTGGAAACCTA+TGG | + | chr5_3:11395858-11395877 | Msa0798650:CDS | 40.0% | |
| TGGTACATCTCTTCTACCAT+AGG | - | chr5_3:11395877-11395896 | None:intergenic | 40.0% | |
| ! | CACTGTTGTTGCTATTGCTT+TGG | - | chr5_3:11395948-11395967 | None:intergenic | 40.0% |
| CAAAGCAATAGCAACAACAG+TGG | + | chr5_3:11395946-11395965 | Msa0798650:CDS | 40.0% | |
| !! | ATGTTGGTGGTGTTTGTGTT+TGG | - | chr5_3:11395975-11395994 | None:intergenic | 40.0% |
| TGATCTCTCGAATCCATTCG+AGG | - | chr5_3:11387698-11387717 | None:intergenic | 45.0% | |
| GACAAAGTTAGGCTGCTACA+AGG | + | chr5_3:11387754-11387773 | Msa0798650:CDS | 45.0% | |
| GAAGGAGAAGGAGAAGAAAG+AGG | + | chr5_3:11387790-11387809 | Msa0798650:CDS | 45.0% | |
| AGACGAAGAACGAAACGTTG+CGG | - | chr5_3:11387893-11387912 | None:intergenic | 45.0% | |
| AGACAACATCCACAACCAAC+AGG | + | chr5_3:11387925-11387944 | Msa0798650:CDS | 45.0% | |
| !!! | TTTTGATGATGAGGTGGTGG+AGG | - | chr5_3:11388108-11388127 | None:intergenic | 45.0% |
| !! | CAAGAAGGAGGTGTTGTTGA+AGG | + | chr5_3:11388234-11388253 | Msa0798650:CDS | 45.0% |
| ! | GTTGAAGGACAAGGTGTTCA+AGG | + | chr5_3:11388249-11388268 | Msa0798650:CDS | 45.0% |
| TCCCATTCGCAATTCTTCCT+CGG | - | chr5_3:11388316-11388335 | None:intergenic | 45.0% | |
| !! | GAGTTTTGCAGTGTTGGAAG+GGG | + | chr5_3:11388603-11388622 | Msa0798650:CDS | 45.0% |
| TTCCTTTGTCAGCTGCTGAT+AGG | + | chr5_3:11388739-11388758 | Msa0798650:CDS | 45.0% | |
| ATCCTATCAGCAGCTGACAA+AGG | - | chr5_3:11388744-11388763 | None:intergenic | 45.0% | |
| GCTTCTTTCCATGCTTGATG+AGG | + | chr5_3:11388788-11388807 | Msa0798650:CDS | 45.0% | |
| TGAAGAGAGAAGGAGAGAGA+GGG | - | chr5_3:11388828-11388847 | None:intergenic | 45.0% | |
| ATGAAGAGAGAAGGAGAGAG+AGG | - | chr5_3:11388829-11388848 | None:intergenic | 45.0% | |
| CTCTCCTTCTCTCTTCATCA+AGG | + | chr5_3:11388831-11388850 | Msa0798650:intron | 45.0% | |
| TGACCCTTGATGAAGAGAGA+AGG | - | chr5_3:11388838-11388857 | None:intergenic | 45.0% | |
| TCTCTCTTCATCAAGGGTCA+AGG | + | chr5_3:11388838-11388857 | Msa0798650:intron | 45.0% | |
| GAAAAATATATGGGGAGGGG+GGG | - | chr5_3:11388865-11388884 | None:intergenic | 45.0% | |
| CCCATGCATCTAACCAGATA+TGG | + | chr5_3:11389180-11389199 | Msa0798650:intron | 45.0% | |
| ! | AATTAGTTCTCTTCTCCGGC+TGG | + | chr5_3:11389454-11389473 | Msa0798650:intron | 45.0% |
| !!! | CTCCGGCTGGTATCTTTTTT+TGG | + | chr5_3:11389467-11389486 | Msa0798650:intron | 45.0% |
| !!! | CGGCTGGTATCTTTTTTTGG+TGG | + | chr5_3:11389470-11389489 | Msa0798650:intron | 45.0% |
| TGAGAAAGAAAAAAGCCGGC+TGG | + | chr5_3:11389577-11389596 | Msa0798650:intron | 45.0% | |
| GATATTCCTACTGTTCCAGC+CGG | - | chr5_3:11389595-11389614 | None:intergenic | 45.0% | |
| CCAACTAATCCTATGCAAGG+AGG | - | chr5_3:11389617-11389636 | None:intergenic | 45.0% | |
| ! | CCTCCTTGCATAGGATTAGT+TGG | + | chr5_3:11389614-11389633 | Msa0798650:intron | 45.0% |
| CCACCAACTAATCCTATGCA+AGG | - | chr5_3:11389620-11389639 | None:intergenic | 45.0% | |
| !! | CCTTGCATAGGATTAGTTGG+TGG | + | chr5_3:11389617-11389636 | Msa0798650:intron | 45.0% |
| !! | TGCATAGGATTAGTTGGTGG+GGG | + | chr5_3:11389620-11389639 | Msa0798650:intron | 45.0% |
| TTCCTCCTGTTTCCAACAGA+AGG | + | chr5_3:11389815-11389834 | Msa0798650:intron | 45.0% | |
| AACGAATGATGCAAAGCCGT+TGG | + | chr5_3:11390649-11390668 | Msa0798650:intron | 45.0% | |
| GGCTTTACACGATAAACGGT+GGG | - | chr5_3:11390736-11390755 | None:intergenic | 45.0% | |
| GTGCGGCTTTACACGATAAA+CGG | - | chr5_3:11390740-11390759 | None:intergenic | 45.0% | |
| CTTGATCCATCATACCCATC+TGG | - | chr5_3:11391093-11391112 | None:intergenic | 45.0% | |
| ATGTATGTAGGCTACACCGT+TGG | + | chr5_3:11392108-11392127 | Msa0798650:intron | 45.0% | |
| AAGGAAAAAAGCAGCAGGGA+GGG | + | chr5_3:11392498-11392517 | Msa0798650:intron | 45.0% | |
| TGCTGGTAAGACAACATCGA+AGG | - | chr5_3:11392631-11392650 | None:intergenic | 45.0% | |
| !! | GAATCTTTTGGCCTTTCTGC+TGG | - | chr5_3:11392648-11392667 | None:intergenic | 45.0% |
| TAGATTCTCACGCCCATGAA+AGG | + | chr5_3:11393254-11393273 | Msa0798650:intron | 45.0% | |
| CATCTATTGGCACGACAAAC+TGG | + | chr5_3:11393406-11393425 | Msa0798650:CDS | 45.0% | |
| AACTGGGCTATCACGAAATC+AGG | + | chr5_3:11393423-11393442 | Msa0798650:CDS | 45.0% | |
| CCAATTGTATGGTTGGGTGA+AGG | - | chr5_3:11393906-11393925 | None:intergenic | 45.0% | |
| CCTTCACCCAACCATACAAT+TGG | + | chr5_3:11393903-11393922 | Msa0798650:intron | 45.0% | |
| !! | TCGTTTGAGCTTTGGAGAGT+GGG | - | chr5_3:11394316-11394335 | None:intergenic | 45.0% |
| !! | ATCGTTTGAGCTTTGGAGAG+TGG | - | chr5_3:11394317-11394336 | None:intergenic | 45.0% |
| CCGTATAACTCACCATTGCA+GGG | - | chr5_3:11394840-11394859 | None:intergenic | 45.0% | |
| CCCTGCAATGGTGAGTTATA+CGG | + | chr5_3:11394837-11394856 | Msa0798650:intron | 45.0% | |
| CCTGCAATGGTGAGTTATAC+GGG | + | chr5_3:11394838-11394857 | Msa0798650:intron | 45.0% | |
| CTGCAATGGTGAGTTATACG+GGG | + | chr5_3:11394839-11394858 | Msa0798650:intron | 45.0% | |
| AATGGTGAGTTATACGGGGA+AGG | + | chr5_3:11394843-11394862 | Msa0798650:intron | 45.0% | |
| ! | TGACCTCTTAAGTCTGGTTC+CGG | - | chr5_3:11394870-11394889 | None:intergenic | 45.0% |
| CACACAGAGAGAAGATACCT+TGG | + | chr5_3:11394985-11395004 | Msa0798650:intron | 45.0% | |
| GCTTTCAGCTTGAGTCACTA+CGG | - | chr5_3:11395172-11395191 | None:intergenic | 45.0% | |
| AATGAGCTAAGCCCAGAAGA+CGG | - | chr5_3:11395217-11395236 | None:intergenic | 45.0% | |
| GAGCTCCCGAGTATAATTGA+CGG | + | chr5_3:11395263-11395282 | Msa0798650:intron | 45.0% | |
| !! | CATTTGGTGTCGGATGCAAT+AGG | + | chr5_3:11395373-11395392 | Msa0798650:intron | 45.0% |
| AGGTTTCCACAATCTAACCC+TGG | - | chr5_3:11395857-11395876 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTGCTGTTGATGT+TGG | - | chr5_3:11395991-11396010 | None:intergenic | 45.0% |
| !!! | TCAGATCTTTTTTGGGGTGG+TGG | - | chr5_3:11396021-11396040 | None:intergenic | 45.0% |
| ! | TGGTTGTGGATTGCATTGCT+TGG | - | chr5_3:11396113-11396132 | None:intergenic | 45.0% |
| ATATCGACACGTGTCATCCA+TGG | - | chr5_3:11396205-11396224 | None:intergenic | 45.0% | |
| ! | ATGGATGACACGTGTCGATA+TGG | + | chr5_3:11396204-11396223 | Msa0798650:CDS | 45.0% |
| !!! | ATAATAATAATTTTTTTTGA+AGG | + | chr5_3:11389341-11389360 | Msa0798650:intron | 5.0% |
| !!! | TATTTTAATAGTATTAATTT+TGG | + | chr5_3:11389711-11389730 | Msa0798650:intron | 5.0% |
| !!! | ATTTTAATAGTATTAATTTT+GGG | + | chr5_3:11389712-11389731 | Msa0798650:intron | 5.0% |
| !!! | ATTAATAATTTAAAATGAAT+AGG | + | chr5_3:11390587-11390606 | Msa0798650:intron | 5.0% |
| !!! | TTAGTTTTTATTTATTTTAA+TGG | + | chr5_3:11390697-11390716 | Msa0798650:intron | 5.0% |
| ATCTTCGGCTTCTCCTCGAA+TGG | + | chr5_3:11387682-11387701 | Msa0798650:CDS | 50.0% | |
| AGCAGCAGCAACAGATCCAA+AGG | + | chr5_3:11387731-11387750 | Msa0798650:CDS | 50.0% | |
| GCAGCAGCAACAGATCCAAA+GGG | + | chr5_3:11387732-11387751 | Msa0798650:CDS | 50.0% | |
| GCAGCCTAACTTTGTCCCTT+TGG | - | chr5_3:11387750-11387769 | None:intergenic | 50.0% | |
| GGAGAAGGAGAAGAAAGAGG+AGG | + | chr5_3:11387793-11387812 | Msa0798650:CDS | 50.0% | |
| ! | GGAGGTGTGTATGAAACAGC+AGG | + | chr5_3:11387811-11387830 | Msa0798650:CDS | 50.0% |
| !! | GGAGGTGTTGTTGAAGGACA+AGG | + | chr5_3:11388240-11388259 | Msa0798650:CDS | 50.0% |
| ATTGGAAGCTGCAAAAGCCG+AGG | + | chr5_3:11388296-11388315 | Msa0798650:CDS | 50.0% | |
| AGCCGAGGAAGAATTGCGAA+TGG | + | chr5_3:11388311-11388330 | Msa0798650:CDS | 50.0% | |
| GCCGAGGAAGAATTGCGAAT+GGG | + | chr5_3:11388312-11388331 | Msa0798650:CDS | 50.0% | |
| GAGGAAGAATTGCGAATGGG+AGG | + | chr5_3:11388315-11388334 | Msa0798650:CDS | 50.0% | |
| GAAGAATTGCGAATGGGAGG+AGG | + | chr5_3:11388318-11388337 | Msa0798650:CDS | 50.0% | |
| CAAGGAGGAGGGACCATTAA+TGG | + | chr5_3:11388474-11388493 | Msa0798650:CDS | 50.0% | |
| TCAGCAGCTGACAAAGGAAG+AGG | - | chr5_3:11388738-11388757 | None:intergenic | 50.0% | |
| !!! | TCTTTTTTTGGTGGTGGCCG+AGG | + | chr5_3:11389479-11389498 | Msa0798650:intron | 50.0% |
| AAAAAGCCGGCTGGAACAGT+AGG | + | chr5_3:11389586-11389605 | Msa0798650:intron | 50.0% | |
| ! | GGAGGAATGTCGCTTCATGA+TGG | - | chr5_3:11389802-11389821 | None:intergenic | 50.0% |
| TGCCTTCTGTTGGAAACAGG+AGG | - | chr5_3:11389820-11389839 | None:intergenic | 50.0% | |
| GAGTGCCTTCTGTTGGAAAC+AGG | - | chr5_3:11389823-11389842 | None:intergenic | 50.0% | |
| AGTGAGTGAGTGCCTTCTGT+TGG | - | chr5_3:11389830-11389849 | None:intergenic | 50.0% | |
| GGTCAACTCTTGTTGCGACT+TGG | - | chr5_3:11390304-11390323 | None:intergenic | 50.0% | |
| CGGCTTTACACGATAAACGG+TGG | - | chr5_3:11390737-11390756 | None:intergenic | 50.0% | |
| ! | CTAGGAGAGAAAGAAGGTGC+AGG | + | chr5_3:11390992-11391011 | Msa0798650:CDS | 50.0% |
| GCAGGAGGAGGTTTAACCAA+AGG | + | chr5_3:11391010-11391029 | Msa0798650:CDS | 50.0% | |
| TAACCAAAGGTGAGACCCCT+AGG | + | chr5_3:11391023-11391042 | Msa0798650:CDS | 50.0% | |
| GAAGCTTGGAGACCACAAAG+AGG | + | chr5_3:11391112-11391131 | Msa0798650:CDS | 50.0% | |
| !!! | ATTTTTTTGGTGGTGGCCCC+CGG | - | chr5_3:11391973-11391992 | None:intergenic | 50.0% |
| CAAGGAAAAAAGCAGCAGGG+AGG | + | chr5_3:11392497-11392516 | Msa0798650:intron | 50.0% | |
| CACCATTGCAGGGTACATGT+AGG | - | chr5_3:11394830-11394849 | None:intergenic | 50.0% | |
| CCCGTATAACTCACCATTGC+AGG | - | chr5_3:11394841-11394860 | None:intergenic | 50.0% | |
| TGAGTTATACGGGGAAGGAC+CGG | + | chr5_3:11394848-11394867 | Msa0798650:intron | 50.0% | |
| ATGAGCTAAGCCCAGAAGAC+GGG | - | chr5_3:11395216-11395235 | None:intergenic | 50.0% | |
| ! | CTCGCACCCCTTAATTTTGC+CGG | - | chr5_3:11395246-11395265 | None:intergenic | 50.0% |
| ! | GCTGTTGCTGTTGATGTTGG+TGG | - | chr5_3:11395988-11396007 | None:intergenic | 50.0% |
| !!! | GATCTTTTTTGGGGTGGTGG+TGG | - | chr5_3:11396018-11396037 | None:intergenic | 50.0% |
| GGTGGCAGGTCTGAATCATA+GGG | - | chr5_3:11396168-11396187 | None:intergenic | 50.0% | |
| TGGTGGCAGGTCTGAATCAT+AGG | - | chr5_3:11396169-11396188 | None:intergenic | 50.0% | |
| ATGGCCATTGATCTGTGTGG+TGG | - | chr5_3:11396186-11396205 | None:intergenic | 50.0% | |
| ACCACACAGATCAATGGCCA+TGG | + | chr5_3:11396185-11396204 | Msa0798650:CDS | 50.0% | |
| TCCATGGCCATTGATCTGTG+TGG | - | chr5_3:11396189-11396208 | None:intergenic | 50.0% | |
| AGGTTTGGGTCCACTACTAC+TGG | + | chr5_3:11396285-11396304 | Msa0798650:CDS | 50.0% | |
| TGACACGTCACCAGTAGTAG+TGG | - | chr5_3:11396298-11396317 | None:intergenic | 50.0% | |
| ! | GTGACGTGTCACTCACGTTA+GGG | + | chr5_3:11396307-11396326 | Msa0798650:CDS | 50.0% |
| TATCAGGCACATTGCCAGCA+TGG | - | chr5_3:11396338-11396357 | None:intergenic | 50.0% | |
| GAATTGCGAATGGGAGGAGG+AGG | + | chr5_3:11388321-11388340 | Msa0798650:CDS | 55.0% | |
| ! | GGAGAGAAAGAAGGTGCAGG+AGG | + | chr5_3:11390995-11391014 | Msa0798650:CDS | 55.0% |
| ! | GAGAAAGAAGGTGCAGGAGG+AGG | + | chr5_3:11390998-11391017 | Msa0798650:CDS | 55.0% |
| AAGCCTAGGGGTCTCACCTT+TGG | - | chr5_3:11391029-11391048 | None:intergenic | 55.0% | |
| CGATCAGGCAAGCCTCTTTG+TGG | - | chr5_3:11391127-11391146 | None:intergenic | 55.0% | |
| GGCCTACATGTACCCTGCAA+TGG | + | chr5_3:11394825-11394844 | Msa0798650:intron | 55.0% | |
| GGACCGGAACCAGACTTAAG+AGG | + | chr5_3:11394864-11394883 | Msa0798650:intron | 55.0% | |
| !! | AGATGAGAGTGCCCGTCTTC+TGG | + | chr5_3:11395202-11395221 | Msa0798650:intron | 55.0% |
| !! | GATGAGAGTGCCCGTCTTCT+GGG | + | chr5_3:11395203-11395222 | Msa0798650:intron | 55.0% |
| !! | GGTGGTGTTGATGGTGGTTG+TGG | - | chr5_3:11396127-11396146 | None:intergenic | 55.0% |
| !! | AGAGACGGTGGTGTTGATGG+TGG | - | chr5_3:11396133-11396152 | None:intergenic | 55.0% |
| ! | CTCAGAGACGGTGGTGTTGA+TGG | - | chr5_3:11396136-11396155 | None:intergenic | 55.0% |
| CATCAACACCACCGTCTCTG+AGG | + | chr5_3:11396134-11396153 | Msa0798650:CDS | 55.0% | |
| GGCAGGTCTGAATCATAGGG+TGG | - | chr5_3:11396165-11396184 | None:intergenic | 55.0% | |
| CCATTGATCTGTGTGGTGGC+AGG | - | chr5_3:11396182-11396201 | None:intergenic | 55.0% | |
| CCTGCCACCACACAGATCAA+TGG | + | chr5_3:11396179-11396198 | Msa0798650:CDS | 55.0% | |
| ! | GGTGACGTGTCACTCACGTT+AGG | + | chr5_3:11396306-11396325 | Msa0798650:CDS | 55.0% |
| ACGTTAGGGTTACGCCATGC+TGG | + | chr5_3:11396321-11396340 | Msa0798650:CDS | 55.0% | |
| TTGCGAATGGGAGGAGGAGG+AGG | + | chr5_3:11388324-11388343 | Msa0798650:CDS | 60.0% | |
| CAAGGTCCGGGTTCGAACCT+CGG | - | chr5_3:11389499-11389518 | None:intergenic | 60.0% | |
| ! | CAACACCACCGTCTCTGAGG+TGG | + | chr5_3:11396137-11396156 | Msa0798650:CDS | 60.0% |
| TGGAACCACCTCAGAGACGG+TGG | - | chr5_3:11396145-11396164 | None:intergenic | 60.0% | |
| GGGTGGAACCACCTCAGAGA+CGG | - | chr5_3:11396148-11396167 | None:intergenic | 60.0% | |
| CGAATGGGAGGAGGAGGAGG+AGG | + | chr5_3:11388327-11388346 | Msa0798650:CDS | 65.0% | |
| ATGGGAGGAGGAGGAGGAGG+AGG | + | chr5_3:11388330-11388349 | Msa0798650:CDS | 65.0% | |
| GGAGGAGGAGGAGGAGGAGA+TGG | + | chr5_3:11388342-11388361 | Msa0798650:CDS | 65.0% | |
| GGAGGAGGAGGAGGAGATGG+TGG | + | chr5_3:11388345-11388364 | Msa0798650:CDS | 65.0% | |
| TGGTGGCCGAGGTTCGAACC+CGG | + | chr5_3:11389490-11389509 | Msa0798650:intron | 65.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr5_3:11388333-11388352 | Msa0798650:CDS | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr5_3:11388333-11388352 | Msa0798650:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 11387553 | 11396495 | 11387553 | ID=Msa0798650;Name=Msa0798650 |
| chr5_3 | mRNA | 11387553 | 11396495 | 11387553 | ID=Msa0798650-mRNA-1;Parent=Msa0798650;Name=Msa0798650-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.66|0.5|1|1|1|4|118|748 |
| chr5_3 | exon | 11387553 | 11388809 | 11387553 | ID=Msa0798650-mRNA-1:exon:4729;Parent=Msa0798650-mRNA-1 |
| chr5_3 | exon | 11390812 | 11391194 | 11390812 | ID=Msa0798650-mRNA-1:exon:4730;Parent=Msa0798650-mRNA-1 |
| chr5_3 | exon | 11393384 | 11393444 | 11393384 | ID=Msa0798650-mRNA-1:exon:4731;Parent=Msa0798650-mRNA-1 |
| chr5_3 | exon | 11395832 | 11396495 | 11395832 | ID=Msa0798650-mRNA-1:exon:4732;Parent=Msa0798650-mRNA-1 |
| chr5_3 | CDS | 11387553 | 11388809 | 11387553 | ID=Msa0798650-mRNA-1:cds;Parent=Msa0798650-mRNA-1 |
| chr5_3 | CDS | 11390812 | 11391194 | 11390812 | ID=Msa0798650-mRNA-1:cds;Parent=Msa0798650-mRNA-1 |
| chr5_3 | CDS | 11393384 | 11393444 | 11393384 | ID=Msa0798650-mRNA-1:cds;Parent=Msa0798650-mRNA-1 |
| chr5_3 | CDS | 11395832 | 11396377 | 11395832 | ID=Msa0798650-mRNA-1:cds;Parent=Msa0798650-mRNA-1 |
| chr5_3 | three_prime_UTR | 11396378 | 11396495 | 11396378 | ID=Msa0798650-mRNA-1:three_prime_utr;Parent=Msa0798650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
