Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837140 | XP_003611874.1 | 94.865 | 740 | 27 | 7 | 15 | 749 | 18 | 751 | 0.0 | 1211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837140 | sp|Q9SW80|BLH2_ARATH | 46.618 | 828 | 259 | 26 | 1 | 745 | 1 | 728 | 7.05e-177 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837140 | G7KAR9 | 94.865 | 740 | 27 | 7 | 15 | 749 | 18 | 751 | 0.0 | 1211 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0837140 | TF | HB-BELL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0798650 | Msa0837140 | 0.814424 | 1.551393e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837140 | MtrunA17_Chr5g0403251 | 94.865 | 740 | 27 | 7 | 15 | 749 | 18 | 751 | 0.0 | 1211 |
| Msa0837140 | MtrunA17_Chr8g0373801 | 52.740 | 876 | 240 | 33 | 1 | 747 | 1 | 831 | 0.0 | 681 |
| Msa0837140 | MtrunA17_Chr8g0387321 | 59.328 | 268 | 95 | 4 | 324 | 586 | 174 | 432 | 4.38e-99 | 318 |
| Msa0837140 | MtrunA17_Chr1g0155681 | 51.418 | 282 | 113 | 4 | 332 | 601 | 165 | 434 | 7.05e-89 | 292 |
| Msa0837140 | MtrunA17_Chr1g0177751 | 44.258 | 357 | 178 | 5 | 304 | 658 | 128 | 465 | 5.93e-82 | 274 |
| Msa0837140 | MtrunA17_Chr3g0141941 | 47.887 | 284 | 109 | 4 | 336 | 601 | 161 | 423 | 1.53e-81 | 269 |
| Msa0837140 | MtrunA17_Chr7g0267481 | 47.385 | 325 | 152 | 5 | 338 | 656 | 172 | 483 | 1.16e-80 | 271 |
| Msa0837140 | MtrunA17_Chr4g0008591 | 43.895 | 344 | 154 | 8 | 296 | 632 | 156 | 467 | 7.74e-74 | 251 |
| Msa0837140 | MtrunA17_Chr4g0028701 | 42.262 | 336 | 136 | 9 | 329 | 620 | 241 | 562 | 1.21e-67 | 236 |
| Msa0837140 | MtrunA17_Chr3g0141931 | 44.964 | 278 | 130 | 9 | 328 | 597 | 160 | 422 | 3.35e-66 | 226 |
| Msa0837140 | MtrunA17_Chr7g0240371 | 40.303 | 330 | 161 | 9 | 328 | 641 | 113 | 422 | 6.67e-64 | 222 |
| Msa0837140 | MtrunA17_Chr2g0327021 | 38.801 | 317 | 156 | 8 | 329 | 631 | 244 | 536 | 1.36e-58 | 209 |
| Msa0837140 | MtrunA17_Chr1g0151681 | 35.640 | 289 | 155 | 9 | 338 | 604 | 232 | 511 | 3.84e-42 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837140 | AT4G36870.2 | 46.618 | 828 | 259 | 26 | 1 | 745 | 1 | 728 | 7.17e-178 | 527 |
| Msa0837140 | AT4G36870.1 | 46.618 | 828 | 259 | 26 | 1 | 745 | 1 | 728 | 7.17e-178 | 527 |
| Msa0837140 | AT4G36870.4 | 50.000 | 620 | 187 | 20 | 1 | 571 | 1 | 546 | 3.01e-150 | 449 |
| Msa0837140 | AT4G36870.3 | 49.838 | 618 | 187 | 20 | 1 | 569 | 1 | 544 | 1.55e-148 | 446 |
| Msa0837140 | AT2G23760.2 | 57.416 | 418 | 135 | 8 | 335 | 745 | 235 | 616 | 9.75e-148 | 446 |
| Msa0837140 | AT2G23760.1 | 57.416 | 418 | 135 | 8 | 335 | 745 | 235 | 616 | 9.75e-148 | 446 |
| Msa0837140 | AT2G23760.3 | 57.416 | 418 | 135 | 8 | 335 | 745 | 235 | 616 | 9.75e-148 | 446 |
| Msa0837140 | AT2G23760.4 | 51.064 | 470 | 135 | 9 | 335 | 745 | 235 | 668 | 1.65e-137 | 421 |
| Msa0837140 | AT5G41410.1 | 51.282 | 273 | 119 | 3 | 341 | 600 | 197 | 468 | 1.88e-88 | 291 |
| Msa0837140 | AT4G34610.2 | 54.340 | 265 | 105 | 3 | 334 | 596 | 137 | 387 | 1.94e-88 | 288 |
| Msa0837140 | AT4G34610.4 | 54.340 | 265 | 105 | 3 | 334 | 596 | 137 | 387 | 1.94e-88 | 288 |
| Msa0837140 | AT4G34610.3 | 54.340 | 265 | 105 | 3 | 334 | 596 | 137 | 387 | 1.94e-88 | 288 |
| Msa0837140 | AT4G34610.1 | 54.340 | 265 | 105 | 3 | 334 | 596 | 137 | 387 | 1.94e-88 | 288 |
| Msa0837140 | AT2G16400.1 | 50.342 | 292 | 123 | 5 | 325 | 612 | 98 | 371 | 8.22e-84 | 275 |
| Msa0837140 | AT1G75410.1 | 51.880 | 266 | 116 | 5 | 334 | 597 | 165 | 420 | 2.77e-83 | 274 |
| Msa0837140 | AT1G75410.2 | 51.880 | 266 | 116 | 5 | 334 | 597 | 165 | 420 | 2.77e-83 | 274 |
| Msa0837140 | AT1G19700.1 | 51.812 | 276 | 119 | 6 | 331 | 599 | 160 | 428 | 1.34e-82 | 273 |
| Msa0837140 | AT1G19700.3 | 51.812 | 276 | 119 | 6 | 331 | 599 | 160 | 428 | 1.34e-82 | 273 |
| Msa0837140 | AT1G19700.5 | 51.812 | 276 | 119 | 6 | 331 | 599 | 160 | 428 | 1.34e-82 | 273 |
| Msa0837140 | AT1G19700.4 | 51.812 | 276 | 119 | 6 | 331 | 599 | 160 | 428 | 1.34e-82 | 273 |
| Msa0837140 | AT1G19700.2 | 51.812 | 276 | 119 | 6 | 331 | 599 | 160 | 428 | 1.34e-82 | 273 |
| Msa0837140 | AT2G35940.3 | 48.000 | 275 | 114 | 6 | 331 | 584 | 180 | 446 | 5.25e-72 | 248 |
| Msa0837140 | AT2G35940.1 | 48.000 | 275 | 114 | 6 | 331 | 584 | 180 | 446 | 5.25e-72 | 248 |
| Msa0837140 | AT2G35940.2 | 48.000 | 275 | 114 | 6 | 331 | 584 | 180 | 446 | 5.25e-72 | 248 |
| Msa0837140 | AT1G75410.3 | 49.372 | 239 | 109 | 5 | 334 | 570 | 165 | 393 | 1.78e-65 | 223 |
| Msa0837140 | AT2G27220.1 | 41.016 | 256 | 117 | 3 | 343 | 598 | 82 | 303 | 6.40e-58 | 203 |
| Msa0837140 | AT2G27220.3 | 41.016 | 256 | 117 | 3 | 343 | 598 | 82 | 303 | 6.40e-58 | 203 |
| Msa0837140 | AT2G27220.2 | 38.996 | 259 | 136 | 4 | 343 | 598 | 82 | 321 | 5.54e-55 | 196 |
| Msa0837140 | AT2G27990.1 | 41.948 | 267 | 123 | 7 | 329 | 593 | 258 | 494 | 6.16e-54 | 196 |
| Msa0837140 | AT1G75430.1 | 37.943 | 282 | 151 | 6 | 338 | 607 | 17 | 286 | 4.01e-53 | 186 |
| Msa0837140 | AT4G32980.1 | 34.448 | 299 | 154 | 9 | 328 | 621 | 196 | 457 | 3.02e-41 | 157 |
| Msa0837140 | AT4G32980.2 | 34.448 | 299 | 154 | 9 | 328 | 621 | 196 | 457 | 3.02e-41 | 157 |
| Msa0837140 | AT2G27990.2 | 34.529 | 223 | 114 | 7 | 329 | 549 | 258 | 450 | 6.12e-28 | 118 |
| Msa0837140 | AT1G75430.2 | 30.804 | 224 | 131 | 6 | 338 | 549 | 17 | 228 | 3.56e-23 | 100 |
Find 165 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCAAATTCTGGTAATTT+TGG | 0.109054 | 5_4:-10949675 | Msa0837140:CDS |
| TGTCCAAAATTACCAGAATT+TGG | 0.120803 | 5_4:+10949672 | None:intergenic |
| ACTTTCTCTATTAGAGATTT+TGG | 0.122211 | 5_4:-10942286 | Msa0837140:exon |
| GATTATGACTTTGTAATAAT+TGG | 0.193571 | 5_4:+10949355 | None:intergenic |
| TTGGATCATCAACTCTTATT+AGG | 0.217445 | 5_4:-10942385 | Msa0837140:CDS |
| AAACCTTGCAAGGTATTATT+AGG | 0.255415 | 5_4:+10949696 | None:intergenic |
| AATCAAAGTTTCTTTGGTTT+TGG | 0.259562 | 5_4:+10950246 | None:intergenic |
| TAATAATTGGTATCCATTAA+TGG | 0.260156 | 5_4:+10949368 | None:intergenic |
| TTGAACAATCAAAGTTTCTT+TGG | 0.260447 | 5_4:+10950240 | None:intergenic |
| CAAGGAGGAGGGACCATTAA+TGG | 0.280022 | 5_4:-10949381 | Msa0837140:CDS |
| AAGGTATTATTAGGAGGGTT+AGG | 0.282608 | 5_4:+10949705 | None:intergenic |
| CATCTATTGGCACGACAAAC+TGG | 0.289203 | 5_4:-10945047 | Msa0837140:CDS |
| TTTGATGTGATGATGGGTTT+TGG | 0.291189 | 5_4:-10947191 | Msa0837140:CDS |
| TCATCAACTCTTATTAGGTT+TGG | 0.291499 | 5_4:-10942380 | Msa0837140:CDS |
| GCAGCCTAACTTTGTCCCTT+TGG | 0.308045 | 5_4:+10950111 | None:intergenic |
| CATCAACTCTTATTAGGTTT+GGG | 0.309054 | 5_4:-10942379 | Msa0837140:CDS |
| GAAATGCTCTTTGTTGTCTT+AGG | 0.315855 | 5_4:+10946991 | None:intergenic |
| CACTGTTGTTGCTATTGCTT+TGG | 0.320557 | 5_4:+10942702 | None:intergenic |
| CATTTAAATTCTTCCACTAT+AGG | 0.326165 | 5_4:-10942260 | Msa0837140:three_prime_UTR |
| CATAATCAAGGTCAAGGATA+TGG | 0.328426 | 5_4:-10949339 | Msa0837140:CDS |
| CTGCTTCATTAAGTTCTTGT+TGG | 0.335542 | 5_4:+10942753 | None:intergenic |
| AAGCCTAGGGGTCTCACCTT+TGG | 0.338082 | 5_4:+10947031 | None:intergenic |
| GTTGCAGAAGATTATGAAAC+AGG | 0.340268 | 5_4:-10942416 | Msa0837140:CDS |
| ACATTGGAGGAACAATTGTT+AGG | 0.346921 | 5_4:+10949183 | None:intergenic |
| ATTATCATTATCTTCTTCAT+TGG | 0.352999 | 5_4:-10949580 | Msa0837140:CDS |
| ATGGATGACACGTGTCGATA+TGG | 0.353373 | 5_4:-10942446 | Msa0837140:CDS |
| TTGCGAATGGGAGGAGGAGG+AGG | 0.368643 | 5_4:-10949534 | Msa0837140:CDS |
| AGGTATTATTAGGAGGGTTA+GGG | 0.391338 | 5_4:+10949706 | None:intergenic |
| TTCCTTTGTCAGCTGCTGAT+AGG | 0.391990 | 5_4:-10949116 | Msa0837140:CDS |
| TGGTGGCAGGTCTGAATCAT+AGG | 0.392301 | 5_4:+10942484 | None:intergenic |
| CGAATGGGAGGAGGAGGAGG+AGG | 0.398256 | 5_4:-10949531 | Msa0837140:CDS |
| AGATCCAAAGGGACAAAGTT+AGG | 0.403966 | 5_4:-10950115 | Msa0837140:CDS |
| AGATTGCTTGCTGATAATCT+TGG | 0.405568 | 5_4:+10950201 | None:intergenic |
| AGCAGCAGCAACAGATCCAA+AGG | 0.414064 | 5_4:-10950127 | Msa0837140:CDS |
| TCCCATTCGCAATTCTTCCT+CGG | 0.414387 | 5_4:+10949545 | None:intergenic |
| ATGTTGGTGGTGTTTGTGTT+TGG | 0.414593 | 5_4:+10942675 | None:intergenic |
| GGTGACGTGTCACTCACGTT+AGG | 0.428419 | 5_4:-10942344 | Msa0837140:CDS |
| GCATCTTAAAATTCCTATAG+TGG | 0.428675 | 5_4:+10942247 | None:intergenic |
| CATTGGAGGAACAATTGTTA+GGG | 0.430971 | 5_4:+10949184 | None:intergenic |
| GGTGGTGTTGATGGTGGTTG+TGG | 0.431955 | 5_4:+10942526 | None:intergenic |
| TACAATATTCAAGGTGGAAG+TGG | 0.433550 | 5_4:-10949468 | Msa0837140:CDS |
| AACTGGGCTATCACGAAATC+AGG | 0.434392 | 5_4:-10945030 | Msa0837140:intron |
| GTTGCTGTTGCTGTTGATGT+TGG | 0.447932 | 5_4:+10942659 | None:intergenic |
| CAACAGGTTCAGAAAATGAT+TGG | 0.449106 | 5_4:-10949917 | Msa0837140:CDS |
| GAATTGCGAATGGGAGGAGG+AGG | 0.449389 | 5_4:-10949537 | Msa0837140:CDS |
| TGATGCAGATAAGCATCTAT+TGG | 0.450574 | 5_4:-10945060 | Msa0837140:CDS |
| GTTCAAGTACTTTAAGCCTA+GGG | 0.450908 | 5_4:+10947018 | None:intergenic |
| CTCAGAGACGGTGGTGTTGA+TGG | 0.454445 | 5_4:+10942517 | None:intergenic |
| GTTGAAGGACAAGGTGTTCA+AGG | 0.454459 | 5_4:-10949609 | Msa0837140:CDS |
| GATTGCTTGCTGATAATCTT+GGG | 0.458597 | 5_4:+10950202 | None:intergenic |
| GAGAAAGAAGGTGCAGGAGG+AGG | 0.463677 | 5_4:-10947059 | Msa0837140:CDS |
| GATTATCAGCAAGCAATCTT+CGG | 0.464683 | 5_4:-10950197 | Msa0837140:CDS |
| TATAATAATTACAATATTCA+AGG | 0.469403 | 5_4:-10949477 | Msa0837140:CDS |
| TCTAACAATTCAGCTGTTGA+AGG | 0.474903 | 5_4:+10949993 | None:intergenic |
| TGGTACATCTCCTCTACCAT+AGG | 0.477351 | 5_4:+10942773 | None:intergenic |
| CTTGATCCATCATACCCATC+TGG | 0.477420 | 5_4:+10946967 | None:intergenic |
| GAACTCATTTGATGTGATGA+TGG | 0.480790 | 5_4:-10947198 | Msa0837140:CDS |
| CCTTGCAAGGTATTATTAGG+AGG | 0.482782 | 5_4:+10949699 | None:intergenic |
| TGTTCAAGTACTTTAAGCCT+AGG | 0.484746 | 5_4:+10947017 | None:intergenic |
| TATAATTGATGCAGGTGGAC+AGG | 0.485098 | 5_4:-10947259 | Msa0837140:intron |
| AGGTTTGGGTCCACTACTAC+TGG | 0.485304 | 5_4:-10942365 | Msa0837140:CDS |
| CGATCAGGCAAGCCTCTTTG+TGG | 0.487003 | 5_4:+10946933 | None:intergenic |
| CAAGAAGGAGGTGTTGTTGA+AGG | 0.492783 | 5_4:-10949624 | Msa0837140:CDS |
| AATTTACAATTGCAAGGAGG+AGG | 0.494958 | 5_4:-10949393 | Msa0837140:CDS |
| TCTTGAAGCAATTCTTGAGT+AGG | 0.496981 | 5_4:+10949273 | None:intergenic |
| GCTGTTGCTGTTGATGTTGG+TGG | 0.498949 | 5_4:+10942662 | None:intergenic |
| AGACAACATCCACAACCAAC+AGG | 0.499590 | 5_4:-10949933 | Msa0837140:CDS |
| ATGGAAGAAGAAGAAGGAAA+TGG | 0.501085 | 5_4:+10950287 | None:intergenic |
| TAACCAAAGGTGAGACCCCT+AGG | 0.502296 | 5_4:-10947034 | Msa0837140:CDS |
| CAAACTGGTTCATAAATGCC+AGG | 0.503008 | 5_4:-10942811 | Msa0837140:CDS |
| CCTCCTAATAATACCTTGCA+AGG | 0.509270 | 5_4:-10949699 | Msa0837140:CDS |
| CCATTGATCTGTGTGGTGGC+AGG | 0.513586 | 5_4:+10942471 | None:intergenic |
| GGTTAGATTGTGGAAACCTA+TGG | 0.513783 | 5_4:-10942789 | Msa0837140:CDS |
| AACAATTGTTCCTCCAATGT+TGG | 0.514198 | 5_4:-10949180 | Msa0837140:CDS |
| TGTTGATGATTTAATTTGTA+CGG | 0.516004 | 5_4:+10949423 | None:intergenic |
| TTGAATTTATCAGAAGGAGA+AGG | 0.516929 | 5_4:-10950080 | Msa0837140:CDS |
| AGATGCTTATCTGCATCACT+TGG | 0.518033 | 5_4:+10945065 | None:intergenic |
| GCAGCAGCAACAGATCCAAA+GGG | 0.519502 | 5_4:-10950126 | Msa0837140:CDS |
| TATGAAACAGGTTCTGACAT+TGG | 0.520544 | 5_4:-10942404 | Msa0837140:CDS |
| GTGACGTGTCACTCACGTTA+GGG | 0.521490 | 5_4:-10942343 | Msa0837140:CDS |
| GAAGGAGAAGGAGAAGAAAG+AGG | 0.521795 | 5_4:-10950068 | Msa0837140:CDS |
| TGGTTGTGGATTGCATTGCT+TGG | 0.522581 | 5_4:+10942540 | None:intergenic |
| ATCTATTGGCACGACAAACT+GGG | 0.524043 | 5_4:-10945046 | Msa0837140:CDS |
| ATCTTCGGCTTCTCCTCGAA+TGG | 0.524189 | 5_4:-10950182 | Msa0837140:CDS |
| GACAAAGTTAGGCTGCTACA+AGG | 0.533345 | 5_4:-10950104 | Msa0837140:CDS |
| CTATTGATTGCAACTAGTGA+AGG | 0.533853 | 5_4:+10942584 | None:intergenic |
| AGGATTAGAATCACCAACAT+TGG | 0.534289 | 5_4:+10949167 | None:intergenic |
| TAAATGCCAGGGTTAGATTG+TGG | 0.540228 | 5_4:-10942799 | Msa0837140:CDS |
| GCTTCTTTCCATGCTTGATG+AGG | 0.541832 | 5_4:-10949067 | Msa0837140:intron |
| TATCAGGCACATTGCCAGCA+TGG | 0.544137 | 5_4:+10942315 | None:intergenic |
| CCTGCCACCACACAGATCAA+TGG | 0.548058 | 5_4:-10942471 | Msa0837140:CDS |
| CTATTGTGAACAAATGCAAA+TGG | 0.548377 | 5_4:-10947225 | Msa0837140:CDS |
| CTTGCAAGGTATTATTAGGA+GGG | 0.550286 | 5_4:+10949700 | None:intergenic |
| TGATCTCTCGAATCCATTCG+AGG | 0.551486 | 5_4:+10950169 | None:intergenic |
| ACGTTAGGGTTACGCCATGC+TGG | 0.552293 | 5_4:-10942329 | Msa0837140:CDS |
| TTGTTTGATGAGATTGAGAA+GGG | 0.552912 | 5_4:+10949793 | None:intergenic |
| GGAGGTGTGTATGAAACAGC+AGG | 0.555434 | 5_4:-10950047 | Msa0837140:CDS |
| CAAGGGTTGAATTTATCAGA+AGG | 0.556382 | 5_4:-10950086 | Msa0837140:CDS |
| GAAGAATTGCGAATGGGAGG+AGG | 0.556651 | 5_4:-10949540 | Msa0837140:CDS |
| CAAAGTCATAATCAAGGTCA+AGG | 0.557301 | 5_4:-10949345 | Msa0837140:CDS |
| AAGCAAAGTTGTGAGTTACT+AGG | 0.558051 | 5_4:-10947083 | Msa0837140:CDS |
| GGTTCAGAAAATGATTGGTA+TGG | 0.558104 | 5_4:-10949912 | Msa0837140:CDS |
| GGTGGCAGGTCTGAATCATA+GGG | 0.560511 | 5_4:+10942485 | None:intergenic |
| ATTTCACCAGATGGGTATGA+TGG | 0.563946 | 5_4:-10946973 | Msa0837140:CDS |
| ATAGGATTGAACATCAAAGA+AGG | 0.565025 | 5_4:-10949098 | Msa0837140:CDS |
| AACTCATTTGATGTGATGAT+GGG | 0.566821 | 5_4:-10947197 | Msa0837140:CDS |
| ACAAAGAGCATTTCACCAGA+TGG | 0.570809 | 5_4:-10946982 | Msa0837140:CDS |
| TAAACAATGGAAGAAGAAGA+AGG | 0.571641 | 5_4:+10950281 | None:intergenic |
| TCAGCAGCTGACAAAGGAAG+AGG | 0.572897 | 5_4:+10949120 | None:intergenic |
| AAAACATTGACAGAACGATC+AGG | 0.573427 | 5_4:+10946918 | None:intergenic |
| GGAGGTGTTGTTGAAGGACA+AGG | 0.574861 | 5_4:-10949618 | Msa0837140:CDS |
| ATTAGAATCACCAACATTGG+AGG | 0.575203 | 5_4:+10949170 | None:intergenic |
| GCCGAGGAAGAATTGCGAAT+GGG | 0.575509 | 5_4:-10949546 | Msa0837140:CDS |
| ATTGTGGAAACCTATGGTAG+AGG | 0.575896 | 5_4:-10942783 | Msa0837140:CDS |
| GCATTGAATTTACAATTGCA+AGG | 0.575976 | 5_4:-10949399 | Msa0837140:CDS |
| CTAGGTGAGAAAGAAGGTGC+AGG | 0.576408 | 5_4:-10947065 | Msa0837140:CDS |
| ACAAAGTTAGGCTGCTACAA+GGG | 0.578561 | 5_4:-10950103 | Msa0837140:CDS |
| GTATGATGGATCAAGAAGCT+TGG | 0.579404 | 5_4:-10946959 | Msa0837140:CDS |
| TTATTACAAAGTCATAATCA+AGG | 0.585308 | 5_4:-10949351 | Msa0837140:CDS |
| AGAATTTGGAAAACCTTGCA+AGG | 0.586012 | 5_4:+10949686 | None:intergenic |
| TACGGATATGATGAAGAAGA+TGG | 0.586895 | 5_4:+10949441 | None:intergenic |
| ATTACATGCCTCATCAAGCA+TGG | 0.588810 | 5_4:+10949059 | None:intergenic |
| ACCACACAGATCAATGGCCA+TGG | 0.589823 | 5_4:-10942465 | Msa0837140:CDS |
| GTGTGTCTTCAAGTAAACAA+TGG | 0.592067 | 5_4:+10950268 | None:intergenic |
| TGGAGCAGCAGTTCCATACA+CGG | 0.592314 | 5_4:-10947171 | Msa0837140:CDS |
| CAAAGAGCATTTCACCAGAT+GGG | 0.592402 | 5_4:-10946981 | Msa0837140:CDS |
| ATATCGACACGTGTCATCCA+TGG | 0.592726 | 5_4:+10942448 | None:intergenic |
| AAAGGATGCAATAACAGCAC+AGG | 0.592866 | 5_4:-10947108 | Msa0837140:CDS |
| AAACTGGTTCATAAATGCCA+GGG | 0.593981 | 5_4:-10942810 | Msa0837140:CDS |
| TGACACGTCACCAGTAGTAG+TGG | 0.595751 | 5_4:+10942355 | None:intergenic |
| GTTGTTTGATGAGATTGAGA+AGG | 0.596534 | 5_4:+10949792 | None:intergenic |
| TTCAAGTACTTTAAGCCTAG+GGG | 0.597443 | 5_4:+10947019 | None:intergenic |
| AATATTCAAGGTGGAAGTGG+AGG | 0.598539 | 5_4:-10949465 | Msa0837140:CDS |
| ATTTACAATTGCAAGGAGGA+GGG | 0.600973 | 5_4:-10949392 | Msa0837140:CDS |
| ATCCTATCAGCAGCTGACAA+AGG | 0.603493 | 5_4:+10949114 | None:intergenic |
| AATAGTACTACTACTCAAGA+AGG | 0.607029 | 5_4:-10949639 | Msa0837140:CDS |
| GCAGCTGACAAAGGAAGAGG+AGG | 0.608039 | 5_4:+10949123 | None:intergenic |
| AGCCGAGGAAGAATTGCGAA+TGG | 0.611459 | 5_4:-10949547 | Msa0837140:CDS |
| GAGGAAGAATTGCGAATGGG+AGG | 0.619684 | 5_4:-10949543 | Msa0837140:CDS |
| GGAGAAGGAGAAGAAAGAGG+AGG | 0.619996 | 5_4:-10950065 | Msa0837140:CDS |
| GATTGAACATCAAAGAAGGA+AGG | 0.620262 | 5_4:-10949094 | Msa0837140:CDS |
| AATAATTACAATATTCAAGG+TGG | 0.620476 | 5_4:-10949474 | Msa0837140:CDS |
| GCAGGAGGAGGTTTAACCAA+AGG | 0.632688 | 5_4:-10947047 | Msa0837140:CDS |
| TGGTATGGTAATAACAGACA+AGG | 0.634269 | 5_4:-10949897 | Msa0837140:CDS |
| TATTGATTGCAACTAGTGAA+GGG | 0.639983 | 5_4:+10942585 | None:intergenic |
| ACAAGAACTTAATGAAGCAG+AGG | 0.640031 | 5_4:-10942750 | Msa0837140:CDS |
| GGTGAGAAAGAAGGTGCAGG+AGG | 0.641973 | 5_4:-10947062 | Msa0837140:CDS |
| CAACACCACCGTCTCTGAGG+TGG | 0.643010 | 5_4:-10942513 | Msa0837140:CDS |
| GGGTGGAACCACCTCAGAGA+CGG | 0.647726 | 5_4:+10942505 | None:intergenic |
| GAGTTACTAGGTGAGAAAGA+AGG | 0.648257 | 5_4:-10947071 | Msa0837140:CDS |
| ATGGCCATTGATCTGTGTGG+TGG | 0.651496 | 5_4:+10942467 | None:intergenic |
| AACATGGGAATAGCAACACT+AGG | 0.651927 | 5_4:-10950311 | Msa0837140:CDS |
| ATTGGAAGCTGCAAAAGCCG+AGG | 0.656833 | 5_4:-10949562 | Msa0837140:CDS |
| CATCAACACCACCGTCTCTG+AGG | 0.661848 | 5_4:-10942516 | Msa0837140:CDS |
| GGCAGGTCTGAATCATAGGG+TGG | 0.663152 | 5_4:+10942488 | None:intergenic |
| AGGTTTCCACAATCTAACCC+TGG | 0.667828 | 5_4:+10942793 | None:intergenic |
| AGTACTACTACTCAAGAAGG+AGG | 0.671426 | 5_4:-10949636 | Msa0837140:CDS |
| AGAGACGGTGGTGTTGATGG+TGG | 0.674556 | 5_4:+10942520 | None:intergenic |
| TGGAACCACCTCAGAGACGG+TGG | 0.677945 | 5_4:+10942508 | None:intergenic |
| TTGAATTTACAATTGCAAGG+AGG | 0.690593 | 5_4:-10949396 | Msa0837140:CDS |
| GAAGCTTGGAGACCACAAAG+AGG | 0.697296 | 5_4:-10946945 | Msa0837140:CDS |
| GGTATGGTAATAACAGACAA+GGG | 0.699769 | 5_4:-10949896 | Msa0837140:CDS |
| TCCATGGCCATTGATCTGTG+TGG | 0.700090 | 5_4:+10942464 | None:intergenic |
| AGACGAAGAACGAAACGTTG+CGG | 0.719547 | 5_4:+10949968 | None:intergenic |
| CAAAGCAATAGCAACAACAG+TGG | 0.740466 | 5_4:-10942701 | Msa0837140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAATAATAATTTTTTTA+AGG | - | chr5_4:10943977-10943996 | Msa0837140:intron | 0.0% |
| !! | TATAATAATTACAATATTCA+AGG | - | chr5_4:10943008-10943027 | Msa0837140:intron | 10.0% |
| !! | AAATATGAAGAAAAATATAT+GGG | + | chr5_4:10943504-10943523 | None:intergenic | 10.0% |
| !! | TAAATATGAAGAAAAATATA+TGG | + | chr5_4:10943505-10943524 | None:intergenic | 10.0% |
| !!! | TATTAATCAGAATTTTATAT+TGG | + | chr5_4:10943953-10943972 | None:intergenic | 10.0% |
| !! | AATTTAAAAAATATATCAGT+TGG | + | chr5_4:10944158-10944177 | None:intergenic | 10.0% |
| !!! | TTTTAATCAATCTATTTAAT+TGG | - | chr5_4:10944299-10944318 | Msa0837140:intron | 10.0% |
| !!! | TCTTTTATATTAGTAAAATT+TGG | - | chr5_4:10945720-10945739 | Msa0837140:intron | 10.0% |
| !!! | CTTTTATATTAGTAAAATTT+GGG | - | chr5_4:10945721-10945740 | Msa0837140:intron | 10.0% |
| !!! | TTAAATATAAAGTGTTAAAA+GGG | - | chr5_4:10945812-10945831 | Msa0837140:intron | 10.0% |
| !!! | TTTTTAATATTGTCAAAAAA+AGG | - | chr5_4:10946310-10946329 | Msa0837140:intron | 10.0% |
| !! | TTAATTAATCAATTCATATA+AGG | - | chr5_4:10947561-10947580 | Msa0837140:intron | 10.0% |
| !! | TTTATCTAAAAAAACAAATT+AGG | + | chr5_4:10947731-10947750 | None:intergenic | 10.0% |
| !! | TATATTAAACAAAAAGAAAA+AGG | - | chr5_4:10948609-10948628 | Msa0837140:intron | 10.0% |
| !!! | GAAAAAAATTGATTTAAATT+TGG | + | chr5_4:10949463-10949482 | None:intergenic | 10.0% |
| !! | AATATGAAGAAAAATATATG+GGG | + | chr5_4:10943503-10943522 | None:intergenic | 15.0% |
| !!! | CACATAAATTTCATTTTTAA+TGG | + | chr5_4:10943746-10943765 | None:intergenic | 15.0% |
| !!! | TATATTATTACATTTTGCTA+TGG | - | chr5_4:10943843-10943862 | Msa0837140:intron | 15.0% |
| !! | TATCTTCAAAATTATTTATG+CGG | - | chr5_4:10943878-10943897 | Msa0837140:intron | 15.0% |
| !!! | ATTTGTTTTAAGAATATCTT+GGG | + | chr5_4:10944968-10944987 | None:intergenic | 15.0% |
| !!! | TATTTGTTTTAAGAATATCT+TGG | + | chr5_4:10944969-10944988 | None:intergenic | 15.0% |
| !!! | GTAACTAAAATATATTTTAG+AGG | + | chr5_4:10945127-10945146 | None:intergenic | 15.0% |
| !!! | GTTAAATATAAAGTGTTAAA+AGG | - | chr5_4:10945811-10945830 | Msa0837140:intron | 15.0% |
| !! | TCTCAAATATAAGTAAAAAT+TGG | - | chr5_4:10946068-10946087 | Msa0837140:intron | 15.0% |
| !!! | TTACCTTTTTTGTATTAAAA+TGG | + | chr5_4:10946398-10946417 | None:intergenic | 15.0% |
| !! | TAAATGAAAAAGATCATTAT+GGG | + | chr5_4:10946462-10946481 | None:intergenic | 15.0% |
| !! | TTAAATGAAAAAGATCATTA+TGG | + | chr5_4:10946463-10946482 | None:intergenic | 15.0% |
| !!! | AGTTTTTATTTATTGAGAAT+TGG | + | chr5_4:10946743-10946762 | None:intergenic | 15.0% |
| !! | ATTTGTTTATTTATCTATCT+AGG | + | chr5_4:10946822-10946841 | None:intergenic | 15.0% |
| !! | TAACCATCTATATTATTAAT+AGG | - | chr5_4:10947116-10947135 | Msa0837140:CDS | 15.0% |
| !!! | ATAAACTGATTAAAAAGTAT+AGG | - | chr5_4:10947177-10947196 | Msa0837140:CDS | 15.0% |
| !! | TAAAAAAGAAACTATGAAAA+GGG | - | chr5_4:10947604-10947623 | Msa0837140:intron | 15.0% |
| !!! | ATTCTTACTTTTATTTTTGT+TGG | - | chr5_4:10947750-10947769 | Msa0837140:intron | 15.0% |
| !! | TAAGAGATATATATGAATAA+CGG | + | chr5_4:10949537-10949556 | None:intergenic | 15.0% |
| !! | ATTATCATTATCTTCTTCAT+TGG | - | chr5_4:10942905-10942924 | Msa0837140:intron | 20.0% |
| !! | AATAATTACAATATTCAAGG+TGG | - | chr5_4:10943011-10943030 | Msa0837140:intron | 20.0% |
| !!! | TGTTGATGATTTAATTTGTA+CGG | + | chr5_4:10943065-10943084 | None:intergenic | 20.0% |
| !! | TAATAATTGGTATCCATTAA+TGG | + | chr5_4:10943120-10943139 | None:intergenic | 20.0% |
| !! | GATTATGACTTTGTAATAAT+TGG | + | chr5_4:10943133-10943152 | None:intergenic | 20.0% |
| !! | TTATTACAAAGTCATAATCA+AGG | - | chr5_4:10943134-10943153 | Msa0837140:intron | 20.0% |
| !! | ATATACAATAATTCCATATC+TGG | + | chr5_4:10943828-10943847 | None:intergenic | 20.0% |
| !!! | AAAAAATATATCAGTTGGTA+TGG | + | chr5_4:10944153-10944172 | None:intergenic | 20.0% |
| !! | AATCAATCTATTTAATTGGT+AGG | - | chr5_4:10944303-10944322 | Msa0837140:intron | 20.0% |
| !! | ATTTCTATGATAGGTATATT+TGG | + | chr5_4:10944550-10944569 | None:intergenic | 20.0% |
| !!! | CTGTAAAATATTTCTATGAT+AGG | + | chr5_4:10944559-10944578 | None:intergenic | 20.0% |
| !!! | ATTTTGCTTATAATAGTCAT+CGG | - | chr5_4:10944800-10944819 | Msa0837140:intron | 20.0% |
| !!! | TTTCATTGTGGATTTTAAAT+GGG | + | chr5_4:10944856-10944875 | None:intergenic | 20.0% |
| !!! | ATTTCATTGTGGATTTTAAA+TGG | + | chr5_4:10944857-10944876 | None:intergenic | 20.0% |
| !! | TATCAACAATATAGTGATTA+AGG | + | chr5_4:10945010-10945029 | None:intergenic | 20.0% |
| !!! | TTTTGGTCAAAGTTTAATTT+CGG | - | chr5_4:10945060-10945079 | Msa0837140:CDS | 20.0% |
| !! | ATAATGAATATAATTGATGC+AGG | - | chr5_4:10945218-10945237 | Msa0837140:intron | 20.0% |
| !! | ATAGTATAAATGGTAGATTA+GGG | + | chr5_4:10945645-10945664 | None:intergenic | 20.0% |
| !! | TATAGTATAAATGGTAGATT+AGG | + | chr5_4:10945646-10945665 | None:intergenic | 20.0% |
| !! | TATATTAGTAAAATTTGGGT+CGG | - | chr5_4:10945725-10945744 | Msa0837140:intron | 20.0% |
| !!! | TAATGAAAATTTTTAGGGTT+AGG | + | chr5_4:10946015-10946034 | None:intergenic | 20.0% |
| !!! | ATATTTGAGACATAATAAGT+TGG | + | chr5_4:10946058-10946077 | None:intergenic | 20.0% |
| !! | AAATGAAAAAGATCATTATG+GGG | + | chr5_4:10946461-10946480 | None:intergenic | 20.0% |
| !!! | ATTCTATTATGTGAATCTTT+TGG | + | chr5_4:10946698-10946717 | None:intergenic | 20.0% |
| !! | GTTAAAAGTTAAAGAATTAG+AGG | + | chr5_4:10946998-10947017 | None:intergenic | 20.0% |
| !! | CTACCTATTAATAATATAGA+TGG | + | chr5_4:10947122-10947141 | None:intergenic | 20.0% |
| !! | CATCTATATTATTAATAGGT+AGG | - | chr5_4:10947120-10947139 | Msa0837140:CDS | 20.0% |
| !!! | TTAAAACTATACAGTTTTCA+TGG | + | chr5_4:10947545-10947564 | None:intergenic | 20.0% |
| !! | GTAAAAAAGAAACTATGAAA+AGG | - | chr5_4:10947603-10947622 | Msa0837140:intron | 20.0% |
| !! | AAAAAAGAAACTATGAAAAG+GGG | - | chr5_4:10947605-10947624 | Msa0837140:intron | 20.0% |
| !! | ACATTTATTTCCCATATTTA+TGG | + | chr5_4:10947964-10947983 | None:intergenic | 20.0% |
| !! | GATATGTAACGAAAAAAATT+AGG | + | chr5_4:10948467-10948486 | None:intergenic | 20.0% |
| !!! | AATTTTTTTCGTTACATATC+TGG | - | chr5_4:10948467-10948486 | Msa0837140:intron | 20.0% |
| !! | AAACTATAACAATAGTCATT+TGG | - | chr5_4:10949195-10949214 | Msa0837140:CDS | 20.0% |
| !! | TGTTATTCTAACTTTAGTTA+AGG | - | chr5_4:10949329-10949348 | Msa0837140:CDS | 20.0% |
| !!! | ATATATATGAATAACGGATT+TGG | + | chr5_4:10949531-10949550 | None:intergenic | 20.0% |
| !!! | ATTGATATCAGATCTTTTTT+GGG | + | chr5_4:10949866-10949885 | None:intergenic | 20.0% |
| !!! | TAGAGAAAGTTATTTTTATC+AGG | + | chr5_4:10950189-10950208 | None:intergenic | 20.0% |
| !!! | AATCAAAGTTTCTTTGGTTT+TGG | + | chr5_4:10942242-10942261 | None:intergenic | 25.0% |
| ! | TTGAACAATCAAAGTTTCTT+TGG | + | chr5_4:10942248-10942267 | None:intergenic | 25.0% |
| !! | TTTCCAAATTCTGGTAATTT+TGG | - | chr5_4:10942810-10942829 | Msa0837140:CDS | 25.0% |
| ! | TCTTTATGTGCTTATCAATT+TGG | - | chr5_4:10943544-10943563 | Msa0837140:intron | 25.0% |
| ! | CTTAGAATTCAATTGATACA+TGG | - | chr5_4:10943598-10943617 | Msa0837140:intron | 25.0% |
| ! | CAATTTAGATGCATTAACTT+AGG | - | chr5_4:10943637-10943656 | Msa0837140:intron | 25.0% |
| !! | AATAAATTAGTTCTCTTCTC+CGG | - | chr5_4:10944067-10944086 | Msa0837140:intron | 25.0% |
| ! | TATGGACAATAATATATGCA+AGG | + | chr5_4:10944135-10944154 | None:intergenic | 25.0% |
| ! | TATTTGAGAAAGAAAAAAGC+CGG | - | chr5_4:10944195-10944214 | Msa0837140:intron | 25.0% |
| !!! | ATTTTGGGTTTGTTTTAGTT+TGG | - | chr5_4:10944351-10944370 | Msa0837140:intron | 25.0% |
| ! | TAGGTATATTTGGATATGTA+AGG | + | chr5_4:10944540-10944559 | None:intergenic | 25.0% |
| ! | ATAGAGAACAGATAGAATAA+GGG | + | chr5_4:10944676-10944695 | None:intergenic | 25.0% |
| ! | AATAGAGAACAGATAGAATA+AGG | + | chr5_4:10944677-10944696 | None:intergenic | 25.0% |
| ! | TATTGAATGAATGATGTATG+CGG | - | chr5_4:10944726-10944745 | Msa0837140:intron | 25.0% |
| !! | TTTTGCTTATAATAGTCATC+GGG | - | chr5_4:10944801-10944820 | Msa0837140:intron | 25.0% |
| !! | TTCATTGTGGATTTTAAATG+GGG | + | chr5_4:10944855-10944874 | None:intergenic | 25.0% |
| !! | GTTTCAAGTAAATTTCATTG+TGG | + | chr5_4:10944868-10944887 | None:intergenic | 25.0% |
| !! | TTTCGACTTTTACAATTGAT+AGG | + | chr5_4:10944890-10944909 | None:intergenic | 25.0% |
| !! | CAAATATTTGTTGGTACATA+TGG | + | chr5_4:10944941-10944960 | None:intergenic | 25.0% |
| ! | CATATGTACCAACAAATATT+TGG | - | chr5_4:10944939-10944958 | Msa0837140:intron | 25.0% |
| !!! | CTTGATTCCTTCAATTTTTT+TGG | - | chr5_4:10945043-10945062 | Msa0837140:CDS | 25.0% |
| ! | ACTTTGACCAAAAAAATTGA+AGG | + | chr5_4:10945053-10945072 | None:intergenic | 25.0% |
| !!! | TATGTTTTTTTCATGTGCAT+CGG | + | chr5_4:10945087-10945106 | None:intergenic | 25.0% |
| ! | CGATGTTAGTATAGTATAAA+TGG | + | chr5_4:10945655-10945674 | None:intergenic | 25.0% |
| !! | TGTAAAACCCATTTTCAAAA+TGG | + | chr5_4:10945756-10945775 | None:intergenic | 25.0% |
| !!! | TTTTCAAGACAAAATTCAGA+CGG | + | chr5_4:10945784-10945803 | None:intergenic | 25.0% |
| !!! | AAATTTTTAGGGTTAGGAAA+TGG | + | chr5_4:10946009-10946028 | None:intergenic | 25.0% |
| !! | CTAATTTTTACTTGCATTTG+AGG | - | chr5_4:10946148-10946167 | Msa0837140:intron | 25.0% |
| ! | ATATGTTGTAAGTTTGAACT+TGG | - | chr5_4:10946219-10946238 | Msa0837140:intron | 25.0% |
| !! | GAGCATTTCATTTTACTTAA+TGG | + | chr5_4:10946376-10946395 | None:intergenic | 25.0% |
| !!! | GCTCCATTTTAATACAAAAA+AGG | - | chr5_4:10946392-10946411 | Msa0837140:intron | 25.0% |
| ! | TTTGCCAAATTACACTAAAA+AGG | - | chr5_4:10946483-10946502 | Msa0837140:intron | 25.0% |
| !!! | GTTACCTTTTTAGTGTAATT+TGG | + | chr5_4:10946490-10946509 | None:intergenic | 25.0% |
| !! | ATAGTGATAGTGATGTATAT+TGG | + | chr5_4:10946774-10946793 | None:intergenic | 25.0% |
| ! | TGTCATTAAAAACAATTCAC+AGG | + | chr5_4:10946910-10946929 | None:intergenic | 25.0% |
| ! | AGTTAAAGAATTAGAGGTTA+TGG | + | chr5_4:10946992-10947011 | None:intergenic | 25.0% |
| !!! | CATTTCTTTTTTCCTTTCAT+GGG | + | chr5_4:10947301-10947320 | None:intergenic | 25.0% |
| !!! | ACATTTCTTTTTTCCTTTCA+TGG | + | chr5_4:10947302-10947321 | None:intergenic | 25.0% |
| ! | ATGTCTCTTTATATGGTTAA+GGG | - | chr5_4:10947354-10947373 | Msa0837140:intron | 25.0% |
| !!! | ACTTTGATGTCATTTTCTTT+TGG | - | chr5_4:10947381-10947400 | Msa0837140:intron | 25.0% |
| ! | TTACGTGAATATGTTTATGT+GGG | + | chr5_4:10947587-10947606 | None:intergenic | 25.0% |
| ! | TTTACGTGAATATGTTTATG+TGG | + | chr5_4:10947588-10947607 | None:intergenic | 25.0% |
| ! | AAAAAGAAACTATGAAAAGG+GGG | - | chr5_4:10947606-10947625 | Msa0837140:intron | 25.0% |
| ! | ATCTGAATTAAATTTACTGC+TGG | + | chr5_4:10947633-10947652 | None:intergenic | 25.0% |
| !! | AGATGTAACTTACATCATTT+TGG | - | chr5_4:10947649-10947668 | Msa0837140:intron | 25.0% |
| !! | GATGTAACTTACATCATTTT+GGG | - | chr5_4:10947650-10947669 | Msa0837140:intron | 25.0% |
| ! | TTTCTTAAAGAAGCAATGTT+TGG | - | chr5_4:10947697-10947716 | Msa0837140:intron | 25.0% |
| ! | ATTTATGGTTACCAATTGTA+TGG | + | chr5_4:10947949-10947968 | None:intergenic | 25.0% |
| !! | ACAATTGGTAACCATAAATA+TGG | - | chr5_4:10947950-10947969 | Msa0837140:intron | 25.0% |
| !! | CAATTGGTAACCATAAATAT+GGG | - | chr5_4:10947951-10947970 | Msa0837140:intron | 25.0% |
| ! | AAATATGGGAAATAAATGTG+TGG | - | chr5_4:10947965-10947984 | Msa0837140:intron | 25.0% |
| !!! | TTTTAAGAGCCTTAAAACTT+TGG | - | chr5_4:10948045-10948064 | Msa0837140:intron | 25.0% |
| !! | TTCTTTTAGCCAAAGTTTTA+AGG | + | chr5_4:10948057-10948076 | None:intergenic | 25.0% |
| ! | GAAGTAAAATGTTTAACCTA+AGG | + | chr5_4:10948198-10948217 | None:intergenic | 25.0% |
| ! | GACACTTAAAAAGAAATGAA+TGG | + | chr5_4:10948268-10948287 | None:intergenic | 25.0% |
| !! | ACAAATCTAAGCTTGTATTT+TGG | + | chr5_4:10948341-10948360 | None:intergenic | 25.0% |
| !!! | TGCACTTATTTTCATAAAGA+CGG | - | chr5_4:10948393-10948412 | Msa0837140:intron | 25.0% |
| ! | ATAAAATATCGTTTGAGCTT+CGG | + | chr5_4:10948436-10948455 | None:intergenic | 25.0% |
| !!! | AATTTCCTAGCCTTATATTT+AGG | - | chr5_4:10948641-10948660 | Msa0837140:intron | 25.0% |
| ! | TTATAAAACCGGCAAAATTA+AGG | - | chr5_4:10949073-10949092 | Msa0837140:CDS | 25.0% |
| ! | TATAAAACCGGCAAAATTAA+GGG | - | chr5_4:10949074-10949093 | Msa0837140:CDS | 25.0% |
| !!! | TTGATATCAGATCTTTTTTG+GGG | + | chr5_4:10949865-10949884 | None:intergenic | 25.0% |
| !!! | CATTGATATCAGATCTTTTT+TGG | + | chr5_4:10949867-10949886 | None:intergenic | 25.0% |
| !! | ACTTTCTCTATTAGAGATTT+TGG | - | chr5_4:10950199-10950218 | Msa0837140:CDS | 25.0% |
| ! | CATTTAAATTCTTCCACTAT+AGG | - | chr5_4:10950225-10950244 | Msa0837140:CDS | 25.0% |
| TAAACAATGGAAGAAGAAGA+AGG | + | chr5_4:10942207-10942226 | None:intergenic | 30.0% | |
| TTGAATTTATCAGAAGGAGA+AGG | - | chr5_4:10942405-10942424 | Msa0837140:CDS | 30.0% | |
| TTGTTTGATGAGATTGAGAA+GGG | + | chr5_4:10942695-10942714 | None:intergenic | 30.0% | |
| !!! | GTTGAAGAATTTTGATGATG+AGG | + | chr5_4:10942744-10942763 | None:intergenic | 30.0% |
| ! | AAACCTTGCAAGGTATTATT+AGG | + | chr5_4:10942792-10942811 | None:intergenic | 30.0% |
| TGTCCAAAATTACCAGAATT+TGG | + | chr5_4:10942816-10942835 | None:intergenic | 30.0% | |
| ! | GTAATTTTGGACAATTCACA+TGG | - | chr5_4:10942823-10942842 | Msa0837140:intron | 30.0% |
| AATAGTACTACTACTCAAGA+AGG | - | chr5_4:10942846-10942865 | Msa0837140:intron | 30.0% | |
| GCATTGAATTTACAATTGCA+AGG | - | chr5_4:10943086-10943105 | Msa0837140:intron | 30.0% | |
| TTGAATTTACAATTGCAAGG+AGG | - | chr5_4:10943089-10943108 | Msa0837140:intron | 30.0% | |
| ATAGGATTGAACATCAAAGA+AGG | - | chr5_4:10943387-10943406 | Msa0837140:intron | 30.0% | |
| TGAAGAAAAATATATGGGGA+GGG | + | chr5_4:10943499-10943518 | None:intergenic | 30.0% | |
| ATGAAGAAAAATATATGGGG+AGG | + | chr5_4:10943500-10943519 | None:intergenic | 30.0% | |
| ATTATTTATGCGGTAAGATG+TGG | - | chr5_4:10943888-10943907 | Msa0837140:intron | 30.0% | |
| ACAATAATATATGCAAGGTC+CGG | + | chr5_4:10944130-10944149 | None:intergenic | 30.0% | |
| CAATCTATTTAATTGGTAGG+AGG | - | chr5_4:10944306-10944325 | Msa0837140:intron | 30.0% | |
| !! | AAATGAGAGTACTAACCATT+AGG | - | chr5_4:10944385-10944404 | Msa0837140:intron | 30.0% |
| TGCTACGTTACTTATTGATA+TGG | + | chr5_4:10944493-10944512 | None:intergenic | 30.0% | |
| GTATATTTGGATATGTAAGG+TGG | + | chr5_4:10944537-10944556 | None:intergenic | 30.0% | |
| CAAGTGAGATATCTTAACAA+AGG | + | chr5_4:10944588-10944607 | None:intergenic | 30.0% | |
| TTTGCTTATAATAGTCATCG+GGG | - | chr5_4:10944802-10944821 | Msa0837140:intron | 30.0% | |
| TTGGGTTACCAAATATTTGT+TGG | + | chr5_4:10944950-10944969 | None:intergenic | 30.0% | |
| ATGAATATAATTGATGCAGG+TGG | - | chr5_4:10945221-10945240 | Msa0837140:intron | 30.0% | |
| CTATTGTGAACAAATGCAAA+TGG | - | chr5_4:10945260-10945279 | Msa0837140:intron | 30.0% | |
| AACTCATTTGATGTGATGAT+GGG | - | chr5_4:10945288-10945307 | Msa0837140:intron | 30.0% | |
| !! | GGTCTTACCATTTTGAAAAT+GGG | - | chr5_4:10945746-10945765 | Msa0837140:intron | 30.0% |
| TTACATTAAGCTCCTTCTAA+AGG | + | chr5_4:10945930-10945949 | None:intergenic | 30.0% | |
| TGGATACGACACATAAATTA+TGG | + | chr5_4:10946609-10946628 | None:intergenic | 30.0% | |
| TTTCTCTAAACGATGTCTTA+TGG | + | chr5_4:10946629-10946648 | None:intergenic | 30.0% | |
| ! | AAATGTTTGAAGCAGAGTTA+AGG | - | chr5_4:10947316-10947335 | Msa0837140:intron | 30.0% |
| ! | AATGTTTGAAGCAGAGTTAA+GGG | - | chr5_4:10947317-10947336 | Msa0837140:intron | 30.0% |
| AGCTTTCATGTCTCTTTATA+TGG | - | chr5_4:10947347-10947366 | Msa0837140:intron | 30.0% | |
| CATGTCTCTTTATATGGTTA+AGG | - | chr5_4:10947353-10947372 | Msa0837140:intron | 30.0% | |
| !!! | ACTTACATCATTTTGGGTTT+TGG | - | chr5_4:10947656-10947675 | Msa0837140:intron | 30.0% |
| TCACAATTAATTATGCCATG+AGG | + | chr5_4:10947784-10947803 | None:intergenic | 30.0% | |
| TAAGTAGTGAAGCAAGAAAT+GGG | - | chr5_4:10947821-10947840 | Msa0837140:intron | 30.0% | |
| !!! | GACATAAAAATGTGCTGTTT+TGG | - | chr5_4:10947843-10947862 | Msa0837140:intron | 30.0% |
| TGTTTGTCTAGTCTAAATTG+AGG | - | chr5_4:10948154-10948173 | Msa0837140:intron | 30.0% | |
| ! | ATCAAATTTTGTCGAGTACA+AGG | + | chr5_4:10948235-10948254 | None:intergenic | 30.0% |
| !!! | TAAGCTTGTATTTTGGTTTG+AGG | + | chr5_4:10948334-10948353 | None:intergenic | 30.0% |
| !!! | TTTCTGGATTTTGGTTTATG+TGG | + | chr5_4:10948526-10948545 | None:intergenic | 30.0% |
| ATAGTGTCATGAGTAACTAA+TGG | - | chr5_4:10948581-10948600 | Msa0837140:intron | 30.0% | |
| AAGGCTAGGAAATTAATTGT+AGG | + | chr5_4:10948635-10948654 | None:intergenic | 30.0% | |
| TACATGTAGGCCTAAATATA+AGG | + | chr5_4:10948654-10948673 | None:intergenic | 30.0% | |
| ATAAAACCGGCAAAATTAAG+GGG | - | chr5_4:10949075-10949094 | Msa0837140:CDS | 30.0% | |
| ! | TTTAGCCTTCAATTATACTC+GGG | + | chr5_4:10949109-10949128 | None:intergenic | 30.0% |
| ! | GTTTAGCCTTCAATTATACT+CGG | + | chr5_4:10949110-10949129 | None:intergenic | 30.0% |
| !! | TAACAATAGTCATTTGGTGT+CGG | - | chr5_4:10949201-10949220 | Msa0837140:CDS | 30.0% |
| TAGAGTAAGCAAATAAGTCT+TGG | + | chr5_4:10949299-10949318 | None:intergenic | 30.0% | |
| AATCCATATGCATAACACAT+AGG | + | chr5_4:10949381-10949400 | None:intergenic | 30.0% | |
| ATGTGTTATGCATATGGATT+TGG | - | chr5_4:10949381-10949400 | Msa0837140:CDS | 30.0% | |
| TACACAGATAATTCATACAC+CGG | + | chr5_4:10949594-10949613 | None:intergenic | 30.0% | |
| TATCTGTGTATTGTGTTGAA+TGG | - | chr5_4:10949604-10949623 | Msa0837140:CDS | 30.0% | |
| ! | TCTTCTTCTTCTTCTTTTTC+AGG | - | chr5_4:10949648-10949667 | Msa0837140:CDS | 30.0% |
| !!! | TTCTTTTTCAGGTATCAAAC+TGG | - | chr5_4:10949659-10949678 | Msa0837140:CDS | 30.0% |
| ! | TATTGATTGCAACTAGTGAA+GGG | + | chr5_4:10949903-10949922 | None:intergenic | 30.0% |
| TTGGATCATCAACTCTTATT+AGG | - | chr5_4:10950100-10950119 | Msa0837140:CDS | 30.0% | |
| TCATCAACTCTTATTAGGTT+TGG | - | chr5_4:10950105-10950124 | Msa0837140:CDS | 30.0% | |
| CATCAACTCTTATTAGGTTT+GGG | - | chr5_4:10950106-10950125 | Msa0837140:CDS | 30.0% | |
| GCATCTTAAAATTCCTATAG+TGG | + | chr5_4:10950241-10950260 | None:intergenic | 30.0% | |
| ATGGAAGAAGAAGAAGGAAA+TGG | + | chr5_4:10942201-10942220 | None:intergenic | 35.0% | |
| GTGTGTCTTCAAGTAAACAA+TGG | + | chr5_4:10942220-10942239 | None:intergenic | 35.0% | |
| ! | GATTGCTTGCTGATAATCTT+GGG | + | chr5_4:10942286-10942305 | None:intergenic | 35.0% |
| ! | AGATTGCTTGCTGATAATCT+TGG | + | chr5_4:10942287-10942306 | None:intergenic | 35.0% |
| GATTATCAGCAAGCAATCTT+CGG | - | chr5_4:10942288-10942307 | Msa0837140:exon | 35.0% | |
| CAAGGGTTGAATTTATCAGA+AGG | - | chr5_4:10942399-10942418 | Msa0837140:CDS | 35.0% | |
| TCTAACAATTCAGCTGTTGA+AGG | + | chr5_4:10942495-10942514 | None:intergenic | 35.0% | |
| ! | CAATCATTTTCTGAACCTGT+TGG | + | chr5_4:10942570-10942589 | None:intergenic | 35.0% |
| CAACAGGTTCAGAAAATGAT+TGG | - | chr5_4:10942568-10942587 | Msa0837140:CDS | 35.0% | |
| GGTTCAGAAAATGATTGGTA+TGG | - | chr5_4:10942573-10942592 | Msa0837140:CDS | 35.0% | |
| TGGTATGGTAATAACAGACA+AGG | - | chr5_4:10942588-10942607 | Msa0837140:CDS | 35.0% | |
| GGTATGGTAATAACAGACAA+GGG | - | chr5_4:10942589-10942608 | Msa0837140:CDS | 35.0% | |
| GTTCATGAGAAAAAGTTGCA+TGG | + | chr5_4:10942673-10942692 | None:intergenic | 35.0% | |
| GTTGTTTGATGAGATTGAGA+AGG | + | chr5_4:10942696-10942715 | None:intergenic | 35.0% | |
| !!! | GAAGAATTTTGATGATGAGG+TGG | + | chr5_4:10942741-10942760 | None:intergenic | 35.0% |
| AGGTATTATTAGGAGGGTTA+GGG | + | chr5_4:10942782-10942801 | None:intergenic | 35.0% | |
| ! | AAGGTATTATTAGGAGGGTT+AGG | + | chr5_4:10942783-10942802 | None:intergenic | 35.0% |
| ! | CTTGCAAGGTATTATTAGGA+GGG | + | chr5_4:10942788-10942807 | None:intergenic | 35.0% |
| AGAATTTGGAAAACCTTGCA+AGG | + | chr5_4:10942802-10942821 | None:intergenic | 35.0% | |
| ! | TTGCAAGGTTTTCCAAATTC+TGG | - | chr5_4:10942801-10942820 | Msa0837140:CDS | 35.0% |
| TACAATATTCAAGGTGGAAG+TGG | - | chr5_4:10943017-10943036 | Msa0837140:intron | 35.0% | |
| TACGGATATGATGAAGAAGA+TGG | + | chr5_4:10943047-10943066 | None:intergenic | 35.0% | |
| AATTTACAATTGCAAGGAGG+AGG | - | chr5_4:10943092-10943111 | Msa0837140:intron | 35.0% | |
| ATTTACAATTGCAAGGAGGA+GGG | - | chr5_4:10943093-10943112 | Msa0837140:intron | 35.0% | |
| CAAAGTCATAATCAAGGTCA+AGG | - | chr5_4:10943140-10943159 | Msa0837140:intron | 35.0% | |
| CATAATCAAGGTCAAGGATA+TGG | - | chr5_4:10943146-10943165 | Msa0837140:intron | 35.0% | |
| TCTTGAAGCAATTCTTGAGT+AGG | + | chr5_4:10943215-10943234 | None:intergenic | 35.0% | |
| CATTGGAGGAACAATTGTTA+GGG | + | chr5_4:10943304-10943323 | None:intergenic | 35.0% | |
| ACATTGGAGGAACAATTGTT+AGG | + | chr5_4:10943305-10943324 | None:intergenic | 35.0% | |
| AACAATTGTTCCTCCAATGT+TGG | - | chr5_4:10943305-10943324 | Msa0837140:intron | 35.0% | |
| ATTAGAATCACCAACATTGG+AGG | + | chr5_4:10943318-10943337 | None:intergenic | 35.0% | |
| AGGATTAGAATCACCAACAT+TGG | + | chr5_4:10943321-10943340 | None:intergenic | 35.0% | |
| ! | GTGTCTTTTGATGAAGAAGA+AGG | + | chr5_4:10943341-10943360 | None:intergenic | 35.0% |
| GATTGAACATCAAAGAAGGA+AGG | - | chr5_4:10943391-10943410 | Msa0837140:intron | 35.0% | |
| AAGAAAAATATATGGGGAGG+GGG | + | chr5_4:10943497-10943516 | None:intergenic | 35.0% | |
| GAAGAAAAATATATGGGGAG+GGG | + | chr5_4:10943498-10943517 | None:intergenic | 35.0% | |
| AATAATATATGCAAGGTCCG+GGG | + | chr5_4:10944128-10944147 | None:intergenic | 35.0% | |
| CAATAATATATGCAAGGTCC+GGG | + | chr5_4:10944129-10944148 | None:intergenic | 35.0% | |
| TCTATTTAATTGGTAGGAGG+AGG | - | chr5_4:10944309-10944328 | Msa0837140:intron | 35.0% | |
| CTATTTAATTGGTAGGAGGA+GGG | - | chr5_4:10944310-10944329 | Msa0837140:intron | 35.0% | |
| TGGTTAGTACTCTCATTTCA+TGG | + | chr5_4:10944383-10944402 | None:intergenic | 35.0% | |
| CTCACTCACTTGTTCAATAT+TGG | - | chr5_4:10944463-10944482 | Msa0837140:intron | 35.0% | |
| GTTAAGATATCTCACTTGAC+AGG | - | chr5_4:10944590-10944609 | Msa0837140:intron | 35.0% | |
| ! | TGGATTTTAAATGGGGTTGA+TGG | + | chr5_4:10944848-10944867 | None:intergenic | 35.0% |
| GAACTCATTTGATGTGATGA+TGG | - | chr5_4:10945287-10945306 | Msa0837140:intron | 35.0% | |
| !!! | TTTGATGTGATGATGGGTTT+TGG | - | chr5_4:10945294-10945313 | Msa0837140:intron | 35.0% |
| ! | AAGCAATGTCTCGACATTTT+CGG | - | chr5_4:10945349-10945368 | Msa0837140:intron | 35.0% |
| AAGCAAAGTTGTGAGTTACT+AGG | - | chr5_4:10945402-10945421 | Msa0837140:intron | 35.0% | |
| TTCAAGTACTTTAAGCCTAG+GGG | + | chr5_4:10945469-10945488 | None:intergenic | 35.0% | |
| GTTCAAGTACTTTAAGCCTA+GGG | + | chr5_4:10945470-10945489 | None:intergenic | 35.0% | |
| TGTTCAAGTACTTTAAGCCT+AGG | + | chr5_4:10945471-10945490 | None:intergenic | 35.0% | |
| ! | GAAATGCTCTTTGTTGTCTT+AGG | + | chr5_4:10945497-10945516 | None:intergenic | 35.0% |
| AAAACATTGACAGAACGATC+AGG | + | chr5_4:10945570-10945589 | None:intergenic | 35.0% | |
| !! | CGGTCTTACCATTTTGAAAA+TGG | - | chr5_4:10945745-10945764 | Msa0837140:intron | 35.0% |
| !! | TGTAAGTTTGAACTTGGTGT+AGG | - | chr5_4:10946225-10946244 | Msa0837140:intron | 35.0% |
| ! | GACTGACTTAAAAAAGCCAA+TGG | + | chr5_4:10946256-10946275 | None:intergenic | 35.0% |
| AAAGGTAACCCACAATACTA+AGG | - | chr5_4:10946501-10946520 | Msa0837140:intron | 35.0% | |
| TCACAGTACCTTAGTATTGT+GGG | + | chr5_4:10946512-10946531 | None:intergenic | 35.0% | |
| ATCACAGTACCTTAGTATTG+TGG | + | chr5_4:10946513-10946532 | None:intergenic | 35.0% | |
| ! | AGGTACTGTGATCATTAACA+AGG | - | chr5_4:10946521-10946540 | Msa0837140:intron | 35.0% |
| TTAACAAGGAAAAAAGCAGC+AGG | - | chr5_4:10946535-10946554 | Msa0837140:intron | 35.0% | |
| TAACAAGGAAAAAAGCAGCA+GGG | - | chr5_4:10946536-10946555 | Msa0837140:intron | 35.0% | |
| ACAATTCACAGGATCTATCT+AGG | + | chr5_4:10946899-10946918 | None:intergenic | 35.0% | |
| TATACACTGATCATGATCAC+TGG | + | chr5_4:10947204-10947223 | None:intergenic | 35.0% | |
| CTCTTTATATGGTTAAGGGA+AGG | - | chr5_4:10947358-10947377 | Msa0837140:intron | 35.0% | |
| ! | TTTCTTTTGGTCTCTTTCTC+AGG | - | chr5_4:10947394-10947413 | Msa0837140:intron | 35.0% |
| TGATGCAGATAAGCATCTAT+TGG | - | chr5_4:10947425-10947444 | Msa0837140:intron | 35.0% | |
| TTGTTGGAACATTTACCTCA+TGG | - | chr5_4:10947766-10947785 | Msa0837140:intron | 35.0% | |
| GTAAGTAGTGAAGCAAGAAA+TGG | - | chr5_4:10947820-10947839 | Msa0837140:intron | 35.0% | |
| AGTCAAGAGAGTGAGTTAAT+TGG | + | chr5_4:10947871-10947890 | None:intergenic | 35.0% | |
| TGTGAGAGACAATGTCAAAA+AGG | + | chr5_4:10947906-10947925 | None:intergenic | 35.0% | |
| TGGTTACCAATTGTATGGTT+GGG | + | chr5_4:10947944-10947963 | None:intergenic | 35.0% | |
| ATGGTTACCAATTGTATGGT+TGG | + | chr5_4:10947945-10947964 | None:intergenic | 35.0% | |
| TGGGAAATAAATGTGTGGTT+TGG | - | chr5_4:10947970-10947989 | Msa0837140:intron | 35.0% | |
| GGGAAATAAATGTGTGGTTT+GGG | - | chr5_4:10947971-10947990 | Msa0837140:intron | 35.0% | |
| GGAAATAAATGTGTGGTTTG+GGG | - | chr5_4:10947972-10947991 | Msa0837140:intron | 35.0% | |
| AATGCTAACGAATACTCCAA+AGG | + | chr5_4:10948093-10948112 | None:intergenic | 35.0% | |
| !! | CTAAGGTCAAAGAGTATTTG+AGG | + | chr5_4:10948181-10948200 | None:intergenic | 35.0% |
| CTCAAATACTCTTTGACCTT+AGG | - | chr5_4:10948179-10948198 | Msa0837140:intron | 35.0% | |
| !!! | TGTCGAGTACAAGGTTTTTT+TGG | + | chr5_4:10948226-10948245 | None:intergenic | 35.0% |
| !! | GCAAGAAAGTTTCTGGATTT+TGG | + | chr5_4:10948535-10948554 | None:intergenic | 35.0% |
| ATAGATGACCTCTTTAAGTC+TGG | + | chr5_4:10948713-10948732 | None:intergenic | 35.0% | |
| GGCTTAGCTCATTATAAAAC+CGG | - | chr5_4:10949062-10949081 | Msa0837140:intron | 35.0% | |
| TGAAGGCTAAACTTGTAAAC+CGG | - | chr5_4:10949118-10949137 | Msa0837140:CDS | 35.0% | |
| !!! | ACAAGCTTTTTTAAGCGTTG+TGG | + | chr5_4:10949145-10949164 | None:intergenic | 35.0% |
| TAACGATTGAACACGAAGTT+CGG | + | chr5_4:10949237-10949256 | None:intergenic | 35.0% | |
| TGAGATTTGTAAAACTCCAC+CGG | - | chr5_4:10949572-10949591 | Msa0837140:CDS | 35.0% | |
| ! | AAACTGGTTCATAAATGCCA+GGG | - | chr5_4:10949675-10949694 | Msa0837140:CDS | 35.0% |
| CTGCTTCATTAAGTTCTTGT+TGG | + | chr5_4:10949735-10949754 | None:intergenic | 35.0% | |
| ACAAGAACTTAATGAAGCAG+AGG | - | chr5_4:10949735-10949754 | Msa0837140:CDS | 35.0% | |
| !!! | ATATCAGATCTTTTTTGGGG+TGG | + | chr5_4:10949862-10949881 | None:intergenic | 35.0% |
| ! | CTATTGATTGCAACTAGTGA+AGG | + | chr5_4:10949904-10949923 | None:intergenic | 35.0% |
| GTTGCAGAAGATTATGAAAC+AGG | - | chr5_4:10950069-10950088 | Msa0837140:CDS | 35.0% | |
| ! | TATGAAACAGGTTCTGACAT+TGG | - | chr5_4:10950081-10950100 | Msa0837140:CDS | 35.0% |
| AGATCCAAAGGGACAAAGTT+AGG | - | chr5_4:10942370-10942389 | Msa0837140:CDS | 40.0% | |
| ACAAAGTTAGGCTGCTACAA+GGG | - | chr5_4:10942382-10942401 | Msa0837140:CDS | 40.0% | |
| !! | TTTTCTGAACCTGTTGGTTG+TGG | + | chr5_4:10942564-10942583 | None:intergenic | 40.0% |
| !!! | GAATTTTGATGATGAGGTGG+TGG | + | chr5_4:10942738-10942757 | None:intergenic | 40.0% |
| ! | CCTTGCAAGGTATTATTAGG+AGG | + | chr5_4:10942789-10942808 | None:intergenic | 40.0% |
| CCTCCTAATAATACCTTGCA+AGG | - | chr5_4:10942786-10942805 | Msa0837140:CDS | 40.0% | |
| AGTACTACTACTCAAGAAGG+AGG | - | chr5_4:10942849-10942868 | Msa0837140:intron | 40.0% | |
| AATATTCAAGGTGGAAGTGG+AGG | - | chr5_4:10943020-10943039 | Msa0837140:intron | 40.0% | |
| ! | CTTCAAGAGTTTTGCAGTGT+TGG | - | chr5_4:10943227-10943246 | Msa0837140:intron | 40.0% |
| !! | AAGAGTTTTGCAGTGTTGGA+AGG | - | chr5_4:10943231-10943250 | Msa0837140:intron | 40.0% |
| !! | AGAGTTTTGCAGTGTTGGAA+GGG | - | chr5_4:10943232-10943251 | Msa0837140:intron | 40.0% |
| ATTACATGCCTCATCAAGCA+TGG | + | chr5_4:10943429-10943448 | None:intergenic | 40.0% | |
| AGAAAAATATATGGGGAGGG+GGG | + | chr5_4:10943496-10943515 | None:intergenic | 40.0% | |
| CCATATCTGGTTAGATGCAT+GGG | + | chr5_4:10943815-10943834 | None:intergenic | 40.0% | |
| TCCATATCTGGTTAGATGCA+TGG | + | chr5_4:10943816-10943835 | None:intergenic | 40.0% | |
| CACCAAAAAAAGATACCAGC+CGG | + | chr5_4:10944089-10944108 | None:intergenic | 40.0% | |
| !!! | CTGGTATCTTTTTTTGGTGG+TGG | - | chr5_4:10944090-10944109 | Msa0837140:intron | 40.0% |
| TAGGAATATCCTCCTTGCAT+AGG | - | chr5_4:10944227-10944246 | Msa0837140:intron | 40.0% | |
| !! | CTTGCATAGGATTAGTTGGT+GGG | - | chr5_4:10944240-10944259 | Msa0837140:intron | 40.0% |
| !! | TTGCATAGGATTAGTTGGTG+GGG | - | chr5_4:10944241-10944260 | Msa0837140:intron | 40.0% |
| GACGTATTCTCTTCTCCTAA+TGG | + | chr5_4:10944403-10944422 | None:intergenic | 40.0% | |
| TATAATTGATGCAGGTGGAC+AGG | - | chr5_4:10945226-10945245 | Msa0837140:intron | 40.0% | |
| !!! | TCGACATTTTCGGTGTCTAA+AGG | - | chr5_4:10945359-10945378 | Msa0837140:intron | 40.0% |
| AAAGGATGCAATAACAGCAC+AGG | - | chr5_4:10945377-10945396 | Msa0837140:intron | 40.0% | |
| GAGTTACTAGGTGAGAAAGA+AGG | - | chr5_4:10945414-10945433 | Msa0837140:intron | 40.0% | |
| !! | ACAAAGAGCATTTCACCAGA+TGG | - | chr5_4:10945503-10945522 | Msa0837140:intron | 40.0% |
| !! | CAAAGAGCATTTCACCAGAT+GGG | - | chr5_4:10945504-10945523 | Msa0837140:intron | 40.0% |
| ATTTCACCAGATGGGTATGA+TGG | - | chr5_4:10945512-10945531 | Msa0837140:intron | 40.0% | |
| !! | GTATGATGGATCAAGAAGCT+TGG | - | chr5_4:10945526-10945545 | Msa0837140:intron | 40.0% |
| !!! | CTGTCAATGTTTTGAGAGCT+TGG | - | chr5_4:10945577-10945596 | Msa0837140:intron | 40.0% |
| GAAAAGACGCGATAACTTAC+GGG | + | chr5_4:10945623-10945642 | None:intergenic | 40.0% | |
| GGAAAAGACGCGATAACTTA+CGG | + | chr5_4:10945624-10945643 | None:intergenic | 40.0% | |
| !! | GCTCCTTCTAAAGGTACTAA+CGG | + | chr5_4:10945921-10945940 | None:intergenic | 40.0% |
| !!! | AAACGTTTTTTGTGAGCCGA+AGG | - | chr5_4:10945960-10945979 | Msa0837140:intron | 40.0% |
| ACCAAAAAGTAGAGCTAGCT+AGG | - | chr5_4:10946417-10946436 | Msa0837140:intron | 40.0% | |
| !!! | ACCTAGCTAGCTCTACTTTT+TGG | + | chr5_4:10946421-10946440 | None:intergenic | 40.0% |
| ATGTTGTCTTACCAGCAGAA+AGG | - | chr5_4:10946672-10946691 | Msa0837140:intron | 40.0% | |
| CTGACATAGCAGAAGTAAAG+AGG | + | chr5_4:10947235-10947254 | None:intergenic | 40.0% | |
| ACTTCTGCTATGTCAGCAAT+AGG | - | chr5_4:10947239-10947258 | Msa0837140:CDS | 40.0% | |
| AGATGCTTATCTGCATCACT+TGG | + | chr5_4:10947423-10947442 | None:intergenic | 40.0% | |
| ATCTATTGGCACGACAAACT+GGG | - | chr5_4:10947439-10947458 | Msa0837140:intron | 40.0% | |
| GTATACTCTACACTGCATTG+TGG | + | chr5_4:10947500-10947519 | None:intergenic | 40.0% | |
| TAAAACCCTAACTTGGGGTA+TGG | + | chr5_4:10948030-10948049 | None:intergenic | 40.0% | |
| GCTCTTAAAACCCTAACTTG+GGG | + | chr5_4:10948035-10948054 | None:intergenic | 40.0% | |
| GGCTCTTAAAACCCTAACTT+GGG | + | chr5_4:10948036-10948055 | None:intergenic | 40.0% | |
| AGGCTCTTAAAACCCTAACT+TGG | + | chr5_4:10948037-10948056 | None:intergenic | 40.0% | |
| ! | GAAAGCGTAATATGTGCCTT+TGG | - | chr5_4:10948074-10948093 | Msa0837140:intron | 40.0% |
| GATGCATGCAAGAAAGTTTC+TGG | + | chr5_4:10948542-10948561 | None:intergenic | 40.0% | |
| GTAGGCCTAAATATAAGGCT+AGG | + | chr5_4:10948649-10948668 | None:intergenic | 40.0% | |
| ! | CAGCAGTTTGCTTCTACAAA+AGG | + | chr5_4:10948753-10948772 | None:intergenic | 40.0% |
| TAGACTATGATTAGGCACCA+AGG | + | chr5_4:10948843-10948862 | None:intergenic | 40.0% | |
| TGCCTAATCATAGTCTAGCA+TGG | - | chr5_4:10948846-10948865 | Msa0837140:intron | 40.0% | |
| CACCATGCTAGACTATGATT+AGG | + | chr5_4:10948851-10948870 | None:intergenic | 40.0% | |
| !!! | CTTTTTTAAGCGTTGTGGTC+CGG | + | chr5_4:10949140-10949159 | None:intergenic | 40.0% |
| TATGCATAACACATAGGAGC+TGG | + | chr5_4:10949375-10949394 | None:intergenic | 40.0% | |
| GCTCCTATGTGTTATGCATA+TGG | - | chr5_4:10949375-10949394 | Msa0837140:CDS | 40.0% | |
| TCAGACTGACCCATTAAGAT+TGG | - | chr5_4:10949432-10949451 | Msa0837140:CDS | 40.0% | |
| ACTGACCCATTAAGATTGGA+CGG | - | chr5_4:10949436-10949455 | Msa0837140:CDS | 40.0% | |
| TTGGACCGTCCAATCTTAAT+GGG | + | chr5_4:10949444-10949463 | None:intergenic | 40.0% | |
| TTTGGACCGTCCAATCTTAA+TGG | + | chr5_4:10949445-10949464 | None:intergenic | 40.0% | |
| TTGGAGTGCATTTGATTGAG+CGG | + | chr5_4:10949512-10949531 | None:intergenic | 40.0% | |
| ACAGATAATTCATACACCGG+TGG | + | chr5_4:10949591-10949610 | None:intergenic | 40.0% | |
| ! | CAAACTGGTTCATAAATGCC+AGG | - | chr5_4:10949674-10949693 | Msa0837140:CDS | 40.0% |
| TAAATGCCAGGGTTAGATTG+TGG | - | chr5_4:10949686-10949705 | Msa0837140:CDS | 40.0% | |
| GGTTAGATTGTGGAAACCTA+TGG | - | chr5_4:10949696-10949715 | Msa0837140:CDS | 40.0% | |
| ATTGTGGAAACCTATGGTAG+AGG | - | chr5_4:10949702-10949721 | Msa0837140:CDS | 40.0% | |
| ! | CACTGTTGTTGCTATTGCTT+TGG | + | chr5_4:10949786-10949805 | None:intergenic | 40.0% |
| CAAAGCAATAGCAACAACAG+TGG | - | chr5_4:10949784-10949803 | Msa0837140:CDS | 40.0% | |
| !! | ATGTTGGTGGTGTTTGTGTT+TGG | + | chr5_4:10949813-10949832 | None:intergenic | 40.0% |
| TGATCTCTCGAATCCATTCG+AGG | + | chr5_4:10942319-10942338 | None:intergenic | 45.0% | |
| GACAAAGTTAGGCTGCTACA+AGG | - | chr5_4:10942381-10942400 | Msa0837140:CDS | 45.0% | |
| GAAGGAGAAGGAGAAGAAAG+AGG | - | chr5_4:10942417-10942436 | Msa0837140:CDS | 45.0% | |
| AGACGAAGAACGAAACGTTG+CGG | + | chr5_4:10942520-10942539 | None:intergenic | 45.0% | |
| AGACAACATCCACAACCAAC+AGG | - | chr5_4:10942552-10942571 | Msa0837140:CDS | 45.0% | |
| !!! | TTTTGATGATGAGGTGGTGG+AGG | + | chr5_4:10942735-10942754 | None:intergenic | 45.0% |
| !! | CAAGAAGGAGGTGTTGTTGA+AGG | - | chr5_4:10942861-10942880 | Msa0837140:intron | 45.0% |
| ! | GTTGAAGGACAAGGTGTTCA+AGG | - | chr5_4:10942876-10942895 | Msa0837140:intron | 45.0% |
| TCCCATTCGCAATTCTTCCT+CGG | + | chr5_4:10942943-10942962 | None:intergenic | 45.0% | |
| !! | GAGTTTTGCAGTGTTGGAAG+GGG | - | chr5_4:10943233-10943252 | Msa0837140:intron | 45.0% |
| TTCCTTTGTCAGCTGCTGAT+AGG | - | chr5_4:10943369-10943388 | Msa0837140:intron | 45.0% | |
| ATCCTATCAGCAGCTGACAA+AGG | + | chr5_4:10943374-10943393 | None:intergenic | 45.0% | |
| GCTTCTTTCCATGCTTGATG+AGG | - | chr5_4:10943418-10943437 | Msa0837140:intron | 45.0% | |
| TCTCCTTCTCTCTTCGTCAA+GGG | - | chr5_4:10943462-10943481 | Msa0837140:intron | 45.0% | |
| GAAAAATATATGGGGAGGGG+GGG | + | chr5_4:10943495-10943514 | None:intergenic | 45.0% | |
| CCCATGCATCTAACCAGATA+TGG | - | chr5_4:10943812-10943831 | Msa0837140:intron | 45.0% | |
| ! | AATTAGTTCTCTTCTCCGGC+TGG | - | chr5_4:10944071-10944090 | Msa0837140:intron | 45.0% |
| !!! | CTCCGGCTGGTATCTTTTTT+TGG | - | chr5_4:10944084-10944103 | Msa0837140:intron | 45.0% |
| !!! | CGGCTGGTATCTTTTTTTGG+TGG | - | chr5_4:10944087-10944106 | Msa0837140:intron | 45.0% |
| TGAGAAAGAAAAAAGCCGGC+TGG | - | chr5_4:10944199-10944218 | Msa0837140:intron | 45.0% | |
| GATATTCCTACTGTTCCAGC+CGG | + | chr5_4:10944217-10944236 | None:intergenic | 45.0% | |
| CCAACTAATCCTATGCAAGG+AGG | + | chr5_4:10944239-10944258 | None:intergenic | 45.0% | |
| ! | CCTCCTTGCATAGGATTAGT+TGG | - | chr5_4:10944236-10944255 | Msa0837140:intron | 45.0% |
| CCACCAACTAATCCTATGCA+AGG | + | chr5_4:10944242-10944261 | None:intergenic | 45.0% | |
| !! | CCTTGCATAGGATTAGTTGG+TGG | - | chr5_4:10944239-10944258 | Msa0837140:intron | 45.0% |
| !! | TGCATAGGATTAGTTGGTGG+GGG | - | chr5_4:10944242-10944261 | Msa0837140:intron | 45.0% |
| TTCCTCCTGTTTCCAACAGA+AGG | - | chr5_4:10944438-10944457 | Msa0837140:intron | 45.0% | |
| ! | TTTTGTGCTAGTGCCGTGTA+TGG | + | chr5_4:10945330-10945349 | None:intergenic | 45.0% |
| CTTGATCCATCATACCCATC+TGG | + | chr5_4:10945521-10945540 | None:intergenic | 45.0% | |
| !! | CTAAAGGTACTAACGGAGCT+CGG | + | chr5_4:10945914-10945933 | None:intergenic | 45.0% |
| GCTCCGTTAGTACCTTTAGA+AGG | - | chr5_4:10945915-10945934 | Msa0837140:intron | 45.0% | |
| ! | TCTAAGGTAGGGAAGACCTT+CGG | + | chr5_4:10945979-10945998 | None:intergenic | 45.0% |
| ! | ATGGTGCTCAGTCTAAGGTA+GGG | + | chr5_4:10945990-10946009 | None:intergenic | 45.0% |
| ! | AATGGTGCTCAGTCTAAGGT+AGG | + | chr5_4:10945991-10946010 | None:intergenic | 45.0% |
| AGGAAATGGTGCTCAGTCTA+AGG | + | chr5_4:10945995-10946014 | None:intergenic | 45.0% | |
| TGCTGGTAAGACAACATCGA+AGG | + | chr5_4:10946669-10946688 | None:intergenic | 45.0% | |
| !! | GAATCTTTTGGCCTTTCTGC+TGG | + | chr5_4:10946686-10946705 | None:intergenic | 45.0% |
| TAGATTCTCACGCCCATGAA+AGG | - | chr5_4:10947286-10947305 | Msa0837140:intron | 45.0% | |
| CATCTATTGGCACGACAAAC+TGG | - | chr5_4:10947438-10947457 | Msa0837140:intron | 45.0% | |
| AACTGGGCTATCACGAAATC+AGG | - | chr5_4:10947455-10947474 | Msa0837140:intron | 45.0% | |
| CCAATTGTATGGTTGGGTGA+AGG | + | chr5_4:10947938-10947957 | None:intergenic | 45.0% | |
| CCTTCACCCAACCATACAAT+TGG | - | chr5_4:10947935-10947954 | Msa0837140:intron | 45.0% | |
| ! | AAATGTGTGGTTTGGGGATC+TGG | - | chr5_4:10947978-10947997 | Msa0837140:intron | 45.0% |
| AACCACCATACCCCAAGTTA+GGG | - | chr5_4:10948022-10948041 | Msa0837140:intron | 45.0% | |
| CCGTATAACTCACCATTGCA+GGG | + | chr5_4:10948677-10948696 | None:intergenic | 45.0% | |
| CCCTGCAATGGTGAGTTATA+CGG | - | chr5_4:10948674-10948693 | Msa0837140:intron | 45.0% | |
| CCTGCAATGGTGAGTTATAC+GGG | - | chr5_4:10948675-10948694 | Msa0837140:intron | 45.0% | |
| CTGCAATGGTGAGTTATACG+GGG | - | chr5_4:10948676-10948695 | Msa0837140:intron | 45.0% | |
| AATGGTGAGTTATACGGGGA+AGG | - | chr5_4:10948680-10948699 | Msa0837140:intron | 45.0% | |
| ! | GACCTCTTTAAGTCTGGTTC+CGG | + | chr5_4:10948707-10948726 | None:intergenic | 45.0% |
| CACACACAGAGAAGATACCT+TGG | - | chr5_4:10948823-10948842 | Msa0837140:intron | 45.0% | |
| GCTTTCAGCTTGAGTCACTA+CGG | + | chr5_4:10949010-10949029 | None:intergenic | 45.0% | |
| AATGAGCTAAGCCCAGAAGA+CGG | + | chr5_4:10949055-10949074 | None:intergenic | 45.0% | |
| GAGCTCCCGAGTATAATTGA+AGG | - | chr5_4:10949101-10949120 | Msa0837140:CDS | 45.0% | |
| !! | CATTTGGTGTCGGATGCAAT+AGG | - | chr5_4:10949211-10949230 | Msa0837140:CDS | 45.0% |
| AGGTTTCCACAATCTAACCC+TGG | + | chr5_4:10949695-10949714 | None:intergenic | 45.0% | |
| TGGTACATCTCCTCTACCAT+AGG | + | chr5_4:10949715-10949734 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTGCTGTTGATGT+TGG | + | chr5_4:10949829-10949848 | None:intergenic | 45.0% |
| !!! | TCAGATCTTTTTTGGGGTGG+TGG | + | chr5_4:10949859-10949878 | None:intergenic | 45.0% |
| ! | TGGTTGTGGATTGCATTGCT+TGG | + | chr5_4:10949948-10949967 | None:intergenic | 45.0% |
| ATATCGACACGTGTCATCCA+TGG | + | chr5_4:10950040-10950059 | None:intergenic | 45.0% | |
| ! | ATGGATGACACGTGTCGATA+TGG | - | chr5_4:10950039-10950058 | Msa0837140:CDS | 45.0% |
| !!! | TAATTTAATAGTATTAATTT+TGG | - | chr5_4:10944335-10944354 | Msa0837140:intron | 5.0% |
| !!! | AATTTAATAGTATTAATTTT+GGG | - | chr5_4:10944336-10944355 | Msa0837140:intron | 5.0% |
| !!! | TTTTATAATGAAAATTTTTA+GGG | + | chr5_4:10946020-10946039 | None:intergenic | 5.0% |
| !!! | TTTTTATAATGAAAATTTTT+AGG | + | chr5_4:10946021-10946040 | None:intergenic | 5.0% |
| ATCTTCGGCTTCTCCTCGAA+TGG | - | chr5_4:10942303-10942322 | Msa0837140:CDS | 50.0% | |
| AGCAGCAGCAACAGATCCAA+AGG | - | chr5_4:10942358-10942377 | Msa0837140:CDS | 50.0% | |
| GCAGCAGCAACAGATCCAAA+GGG | - | chr5_4:10942359-10942378 | Msa0837140:CDS | 50.0% | |
| GCAGCCTAACTTTGTCCCTT+TGG | + | chr5_4:10942377-10942396 | None:intergenic | 50.0% | |
| GGAGAAGGAGAAGAAAGAGG+AGG | - | chr5_4:10942420-10942439 | Msa0837140:CDS | 50.0% | |
| ! | GGAGGTGTGTATGAAACAGC+AGG | - | chr5_4:10942438-10942457 | Msa0837140:CDS | 50.0% |
| !! | GGAGGTGTTGTTGAAGGACA+AGG | - | chr5_4:10942867-10942886 | Msa0837140:intron | 50.0% |
| ATTGGAAGCTGCAAAAGCCG+AGG | - | chr5_4:10942923-10942942 | Msa0837140:intron | 50.0% | |
| AGCCGAGGAAGAATTGCGAA+TGG | - | chr5_4:10942938-10942957 | Msa0837140:intron | 50.0% | |
| GCCGAGGAAGAATTGCGAAT+GGG | - | chr5_4:10942939-10942958 | Msa0837140:intron | 50.0% | |
| GAGGAAGAATTGCGAATGGG+AGG | - | chr5_4:10942942-10942961 | Msa0837140:intron | 50.0% | |
| GAAGAATTGCGAATGGGAGG+AGG | - | chr5_4:10942945-10942964 | Msa0837140:intron | 50.0% | |
| CAAGGAGGAGGGACCATTAA+TGG | - | chr5_4:10943104-10943123 | Msa0837140:intron | 50.0% | |
| TCAGCAGCTGACAAAGGAAG+AGG | + | chr5_4:10943368-10943387 | None:intergenic | 50.0% | |
| CGAAGAGAGAAGGAGAGAGA+GGG | + | chr5_4:10943458-10943477 | None:intergenic | 50.0% | |
| ACGAAGAGAGAAGGAGAGAG+AGG | + | chr5_4:10943459-10943478 | None:intergenic | 50.0% | |
| CTCTCCTTCTCTCTTCGTCA+AGG | - | chr5_4:10943461-10943480 | Msa0837140:intron | 50.0% | |
| TGACCCTTGACGAAGAGAGA+AGG | + | chr5_4:10943468-10943487 | None:intergenic | 50.0% | |
| TCTCTCTTCGTCAAGGGTCA+AGG | - | chr5_4:10943468-10943487 | Msa0837140:intron | 50.0% | |
| !!! | TCTTTTTTTGGTGGTGGCCG+AGG | - | chr5_4:10944096-10944115 | Msa0837140:intron | 50.0% |
| AAAAAGCCGGCTGGAACAGT+AGG | - | chr5_4:10944208-10944227 | Msa0837140:intron | 50.0% | |
| ! | GGAGGAATGTCGCTTCATGA+TGG | + | chr5_4:10944425-10944444 | None:intergenic | 50.0% |
| TGCCTTCTGTTGGAAACAGG+AGG | + | chr5_4:10944443-10944462 | None:intergenic | 50.0% | |
| GAGTGCCTTCTGTTGGAAAC+AGG | + | chr5_4:10944446-10944465 | None:intergenic | 50.0% | |
| AGTGAGTGAGTGCCTTCTGT+TGG | + | chr5_4:10944453-10944472 | None:intergenic | 50.0% | |
| GGTCAACTCTTGTTGCGACT+TGG | + | chr5_4:10944920-10944939 | None:intergenic | 50.0% | |
| TGGAGCAGCAGTTCCATACA+CGG | - | chr5_4:10945314-10945333 | Msa0837140:intron | 50.0% | |
| ! | CTAGGTGAGAAAGAAGGTGC+AGG | - | chr5_4:10945420-10945439 | Msa0837140:intron | 50.0% |
| GCAGGAGGAGGTTTAACCAA+AGG | - | chr5_4:10945438-10945457 | Msa0837140:intron | 50.0% | |
| TAACCAAAGGTGAGACCCCT+AGG | - | chr5_4:10945451-10945470 | Msa0837140:intron | 50.0% | |
| GAAGCTTGGAGACCACAAAG+AGG | - | chr5_4:10945540-10945559 | Msa0837140:intron | 50.0% | |
| ! | CTTGGTGTAGGCTACACCAT+TGG | - | chr5_4:10946237-10946256 | Msa0837140:intron | 50.0% |
| CAACCACCATACCCCAAGTT+AGG | - | chr5_4:10948021-10948040 | Msa0837140:intron | 50.0% | |
| AACCCTAACTTGGGGTATGG+TGG | + | chr5_4:10948027-10948046 | None:intergenic | 50.0% | |
| TCGTTTGAGCTTCGGAGAGT+GGG | + | chr5_4:10948428-10948447 | None:intergenic | 50.0% | |
| ATCGTTTGAGCTTCGGAGAG+TGG | + | chr5_4:10948429-10948448 | None:intergenic | 50.0% | |
| CACCATTGCAGGGTACATGT+AGG | + | chr5_4:10948667-10948686 | None:intergenic | 50.0% | |
| CCCGTATAACTCACCATTGC+AGG | + | chr5_4:10948678-10948697 | None:intergenic | 50.0% | |
| TGAGTTATACGGGGAAGGAC+CGG | - | chr5_4:10948685-10948704 | Msa0837140:intron | 50.0% | |
| GACCGGAACCAGACTTAAAG+AGG | - | chr5_4:10948702-10948721 | Msa0837140:intron | 50.0% | |
| ATGAGCTAAGCCCAGAAGAC+GGG | + | chr5_4:10949054-10949073 | None:intergenic | 50.0% | |
| ! | CTCGCACCCCTTAATTTTGC+CGG | + | chr5_4:10949084-10949103 | None:intergenic | 50.0% |
| ! | GCTGTTGCTGTTGATGTTGG+TGG | + | chr5_4:10949826-10949845 | None:intergenic | 50.0% |
| !!! | GATCTTTTTTGGGGTGGTGG+TGG | + | chr5_4:10949856-10949875 | None:intergenic | 50.0% |
| GGTGGCAGGTCTGAATCATA+GGG | + | chr5_4:10950003-10950022 | None:intergenic | 50.0% | |
| TGGTGGCAGGTCTGAATCAT+AGG | + | chr5_4:10950004-10950023 | None:intergenic | 50.0% | |
| ATGGCCATTGATCTGTGTGG+TGG | + | chr5_4:10950021-10950040 | None:intergenic | 50.0% | |
| ACCACACAGATCAATGGCCA+TGG | - | chr5_4:10950020-10950039 | Msa0837140:CDS | 50.0% | |
| TCCATGGCCATTGATCTGTG+TGG | + | chr5_4:10950024-10950043 | None:intergenic | 50.0% | |
| AGGTTTGGGTCCACTACTAC+TGG | - | chr5_4:10950120-10950139 | Msa0837140:CDS | 50.0% | |
| TGACACGTCACCAGTAGTAG+TGG | + | chr5_4:10950133-10950152 | None:intergenic | 50.0% | |
| ! | GTGACGTGTCACTCACGTTA+GGG | - | chr5_4:10950142-10950161 | Msa0837140:CDS | 50.0% |
| TATCAGGCACATTGCCAGCA+TGG | + | chr5_4:10950173-10950192 | None:intergenic | 50.0% | |
| GAATTGCGAATGGGAGGAGG+AGG | - | chr5_4:10942948-10942967 | Msa0837140:intron | 55.0% | |
| GCAGCTGACAAAGGAAGAGG+AGG | + | chr5_4:10943365-10943384 | None:intergenic | 55.0% | |
| ! | GGTGAGAAAGAAGGTGCAGG+AGG | - | chr5_4:10945423-10945442 | Msa0837140:intron | 55.0% |
| ! | GAGAAAGAAGGTGCAGGAGG+AGG | - | chr5_4:10945426-10945445 | Msa0837140:intron | 55.0% |
| AAGCCTAGGGGTCTCACCTT+TGG | + | chr5_4:10945457-10945476 | None:intergenic | 55.0% | |
| CGATCAGGCAAGCCTCTTTG+TGG | + | chr5_4:10945555-10945574 | None:intergenic | 55.0% | |
| ! | TGTGGTTTGGGGATCTGGCT+TGG | - | chr5_4:10947983-10948002 | Msa0837140:intron | 55.0% |
| TTGGGGTATGGTGGTTGCCT+GGG | + | chr5_4:10948018-10948037 | None:intergenic | 55.0% | |
| GGCCTACATGTACCCTGCAA+TGG | - | chr5_4:10948662-10948681 | Msa0837140:intron | 55.0% | |
| !! | AGATGAGAGTGCCCGTCTTC+TGG | - | chr5_4:10949040-10949059 | Msa0837140:intron | 55.0% |
| !! | GATGAGAGTGCCCGTCTTCT+GGG | - | chr5_4:10949041-10949060 | Msa0837140:intron | 55.0% |
| !! | GGTGGTGTTGATGGTGGTTG+TGG | + | chr5_4:10949962-10949981 | None:intergenic | 55.0% |
| !! | AGAGACGGTGGTGTTGATGG+TGG | + | chr5_4:10949968-10949987 | None:intergenic | 55.0% |
| ! | CTCAGAGACGGTGGTGTTGA+TGG | + | chr5_4:10949971-10949990 | None:intergenic | 55.0% |
| CATCAACACCACCGTCTCTG+AGG | - | chr5_4:10949969-10949988 | Msa0837140:CDS | 55.0% | |
| GGCAGGTCTGAATCATAGGG+TGG | + | chr5_4:10950000-10950019 | None:intergenic | 55.0% | |
| CCATTGATCTGTGTGGTGGC+AGG | + | chr5_4:10950017-10950036 | None:intergenic | 55.0% | |
| CCTGCCACCACACAGATCAA+TGG | - | chr5_4:10950014-10950033 | Msa0837140:CDS | 55.0% | |
| ! | GGTGACGTGTCACTCACGTT+AGG | - | chr5_4:10950141-10950160 | Msa0837140:CDS | 55.0% |
| ACGTTAGGGTTACGCCATGC+TGG | - | chr5_4:10950156-10950175 | Msa0837140:CDS | 55.0% | |
| TTGCGAATGGGAGGAGGAGG+AGG | - | chr5_4:10942951-10942970 | Msa0837140:intron | 60.0% | |
| AAGGTCCGGGGTTCGAACCT+CGG | + | chr5_4:10944116-10944135 | None:intergenic | 60.0% | |
| !! | TTGGGGATCTGGCTTGGACC+TGG | - | chr5_4:10947989-10948008 | Msa0837140:intron | 60.0% |
| CTTGGGGTATGGTGGTTGCC+TGG | + | chr5_4:10948019-10948038 | None:intergenic | 60.0% | |
| ! | CAACACCACCGTCTCTGAGG+TGG | - | chr5_4:10949972-10949991 | Msa0837140:CDS | 60.0% |
| TGGAACCACCTCAGAGACGG+TGG | + | chr5_4:10949980-10949999 | None:intergenic | 60.0% | |
| GGGTGGAACCACCTCAGAGA+CGG | + | chr5_4:10949983-10950002 | None:intergenic | 60.0% | |
| CGAATGGGAGGAGGAGGAGG+AGG | - | chr5_4:10942954-10942973 | Msa0837140:intron | 65.0% | |
| ATGGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:10942957-10942976 | Msa0837140:intron | 65.0% | |
| GGAGGAGGAGGAGGAGGAGA+TGG | - | chr5_4:10942972-10942991 | Msa0837140:intron | 65.0% | |
| GGAGGAGGAGGAGGAGATGG+TGG | - | chr5_4:10942975-10942994 | Msa0837140:intron | 65.0% | |
| ! | TGGCTTGGACCTGGCTTCCC+AGG | - | chr5_4:10947998-10948017 | Msa0837140:intron | 65.0% |
| TGGTGGTTGCCTGGGAAGCC+AGG | + | chr5_4:10948010-10948029 | None:intergenic | 65.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:10942960-10942979 | Msa0837140:intron | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:10942960-10942979 | Msa0837140:intron | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:10942960-10942979 | Msa0837140:intron | 70.0% | |
| GGTGGCCGAGGTTCGAACCC+CGG | - | chr5_4:10944108-10944127 | Msa0837140:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 10942177 | 10950330 | 10942177 | ID=Msa0837140;Name=Msa0837140 |
| chr5_4 | mRNA | 10942177 | 10950330 | 10942177 | ID=Msa0837140-mRNA-1;Parent=Msa0837140;Name=Msa0837140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.66|0.5|1|1|1|4|118|749 |
| chr5_4 | exon | 10942177 | 10942837 | 10942177 | ID=Msa0837140-mRNA-1:exon:4778;Parent=Msa0837140-mRNA-1 |
| chr5_4 | exon | 10945031 | 10945091 | 10945031 | ID=Msa0837140-mRNA-1:exon:4777;Parent=Msa0837140-mRNA-1 |
| chr5_4 | exon | 10946885 | 10947267 | 10946885 | ID=Msa0837140-mRNA-1:exon:4776;Parent=Msa0837140-mRNA-1 |
| chr5_4 | exon | 10949068 | 10950330 | 10949068 | ID=Msa0837140-mRNA-1:exon:4775;Parent=Msa0837140-mRNA-1 |
| chr5_4 | CDS | 10949068 | 10950330 | 10949068 | ID=Msa0837140-mRNA-1:cds;Parent=Msa0837140-mRNA-1 |
| chr5_4 | CDS | 10946885 | 10947267 | 10946885 | ID=Msa0837140-mRNA-1:cds;Parent=Msa0837140-mRNA-1 |
| chr5_4 | CDS | 10945031 | 10945091 | 10945031 | ID=Msa0837140-mRNA-1:cds;Parent=Msa0837140-mRNA-1 |
| chr5_4 | CDS | 10942295 | 10942837 | 10942295 | ID=Msa0837140-mRNA-1:cds;Parent=Msa0837140-mRNA-1 |
| chr5_4 | three_prime_UTR | 10942177 | 10942294 | 10942177 | ID=Msa0837140-mRNA-1:three_prime_utr;Parent=Msa0837140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
