AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0802160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802160 MtrunA17_Chr5g0409411 99.331 598 4 0 1 598 1 598 0.0 1243
Msa0802160 MtrunA17_Chr8g0369481 76.000 600 138 3 1 598 1 596 0.0 954
Msa0802160 MtrunA17_Chr1g0203741 45.710 606 301 12 11 590 14 617 0.0 545
Msa0802160 MtrunA17_Chr6g0472571 48.956 527 256 8 72 590 105 626 0.0 525
Msa0802160 MtrunA17_Chr8g0350391 47.917 528 264 9 72 590 105 630 1.09e-178 520
Msa0802160 MtrunA17_Chr8g0388881 46.970 528 266 8 72 590 98 620 5.46e-178 518
Msa0802160 MtrunA17_Chr4g0055031 43.115 610 313 11 13 597 10 610 4.28e-176 512
Msa0802160 MtrunA17_Chr7g0246701 47.874 541 261 11 73 598 102 636 1.33e-173 507
Msa0802160 MtrunA17_Chr8g0361791 43.000 600 312 11 13 590 9 600 9.14e-168 491
Msa0802160 MtrunA17_Chr5g0416991 41.833 600 318 10 13 590 9 599 2.56e-167 489
Msa0802160 MtrunA17_Chr7g0214551 46.332 518 268 7 57 566 28 543 5.09e-164 480
Msa0802160 MtrunA17_Chr3g0092501 42.905 599 310 14 13 590 10 597 3.52e-163 479
Msa0802160 MtrunA17_Chr7g0246681 43.879 531 272 9 71 591 74 588 9.56e-154 454
Msa0802160 MtrunA17_Chr1g0167381 38.818 626 325 11 13 595 10 620 3.67e-151 449
Msa0802160 MtrunA17_Chr8g0350351 40.429 559 296 10 49 590 62 600 1.98e-150 446
Msa0802160 MtrunA17_Chr1g0183721 40.134 598 327 11 13 595 9 590 2.70e-148 441
Msa0802160 MtrunA17_Chr3g0112341 43.199 544 281 11 60 589 138 667 8.70e-147 439
Msa0802160 MtrunA17_Chr1g0187601 40.727 550 291 9 66 595 85 619 1.53e-144 432
Msa0802160 MtrunA17_Chr8g0372471 43.074 527 266 11 81 593 387 893 8.96e-141 431
Msa0802160 MtrunA17_Chr5g0435751 40.966 559 287 11 38 587 93 617 3.57e-140 421
Msa0802160 MtrunA17_Chr3g0130381 42.135 534 270 14 81 595 268 781 1.74e-138 422
Msa0802160 MtrunA17_Chr1g0159741 41.954 522 276 12 81 589 151 658 3.11e-138 417
Msa0802160 MtrunA17_Chr5g0437501 40.445 539 272 13 81 597 101 612 1.43e-134 406
Msa0802160 MtrunA17_Chr3g0113981 41.300 523 269 12 81 592 175 670 7.51e-132 401
Msa0802160 MtrunA17_Chr3g0125511 41.463 533 272 15 81 593 233 745 7.65e-132 403
Msa0802160 MtrunA17_Chr8g0384431 40.490 531 279 13 53 566 275 785 1.24e-129 399
Msa0802160 MtrunA17_Chr1g0171781 38.436 601 315 15 25 590 23 603 2.36e-126 384
Msa0802160 MtrunA17_Chr1g0155141 36.832 524 290 13 80 592 208 701 8.41e-111 347
Msa0802160 MtrunA17_Chr5g0426281 32.541 547 315 14 75 591 149 671 1.11e-96 310
Msa0802160 MtrunA17_Chr3g0115931 31.597 576 343 15 51 591 130 689 4.04e-95 306
Msa0802160 MtrunA17_Chr5g0404771 51.351 222 103 3 81 299 329 548 5.22e-70 236
Msa0802160 MtrunA17_Chr5g0404761 36.207 290 160 8 322 597 1 279 7.99e-62 206
Msa0802160 MtrunA17_Chr4g0043121 29.762 336 218 6 55 382 71 396 4.02e-50 179
Msa0802160 MtrunA17_Chr4g0043131 47.297 148 68 4 446 587 37 180 6.44e-37 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802160 AT4G19120.1 74.167 600 151 3 1 598 1 598 0.0 956
Msa0802160 AT4G19120.2 74.167 600 151 3 1 598 1 598 0.0 956
Msa0802160 AT1G31850.1 73.422 602 152 4 4 597 2 603 0.0 953
Msa0802160 AT1G31850.2 73.422 602 152 4 4 597 2 603 0.0 953
Msa0802160 AT1G31850.4 73.422 602 152 4 4 597 2 603 0.0 953
Msa0802160 AT1G31850.3 73.422 602 152 4 4 597 2 603 0.0 953
Msa0802160 AT4G19120.3 74.451 501 124 3 1 499 1 499 0.0 799
Msa0802160 AT4G10440.1 46.816 534 269 8 72 594 93 622 1.36e-178 520
Msa0802160 AT1G33170.1 46.442 534 272 8 72 595 110 639 2.76e-176 514
Msa0802160 AT4G00750.1 42.623 610 312 12 14 590 18 622 1.79e-173 506
Msa0802160 AT2G45750.1 46.516 531 272 7 71 590 86 615 1.86e-171 501
Msa0802160 AT4G18030.1 43.301 612 315 11 10 596 5 609 5.89e-171 500
Msa0802160 AT1G26850.2 41.571 611 324 13 14 597 11 615 2.01e-165 485
Msa0802160 AT1G26850.1 41.571 611 324 13 14 597 11 615 2.01e-165 485
Msa0802160 AT2G43200.2 45.898 512 267 8 72 576 91 599 7.08e-163 479
Msa0802160 AT2G43200.1 45.898 512 267 8 72 576 91 599 7.08e-163 479
Msa0802160 AT4G00740.1 42.752 545 275 12 66 595 77 599 3.54e-157 464
Msa0802160 AT4G00740.2 42.752 545 275 12 66 595 77 599 3.54e-157 464
Msa0802160 AT2G39750.1 43.566 544 280 11 57 589 164 691 8.63e-149 446
Msa0802160 AT3G23300.2 41.774 541 291 8 69 595 76 606 4.33e-146 436
Msa0802160 AT3G23300.1 41.774 541 291 8 69 595 76 606 4.33e-146 436
Msa0802160 AT5G06050.1 41.758 546 289 11 56 589 135 663 4.99e-146 438
Msa0802160 AT1G04430.1 40.753 584 308 13 34 595 51 618 7.35e-145 433
Msa0802160 AT1G04430.3 40.753 584 308 13 34 595 51 618 7.35e-145 433
Msa0802160 AT1G04430.2 40.753 584 308 13 34 595 51 618 7.35e-145 433
Msa0802160 AT2G34300.2 43.609 532 264 12 81 595 250 762 1.57e-144 437
Msa0802160 AT2G34300.3 43.609 532 264 12 81 595 250 762 1.57e-144 437
Msa0802160 AT2G34300.1 43.609 532 264 12 81 595 250 762 1.57e-144 437
Msa0802160 AT4G14360.1 41.774 541 291 8 69 595 73 603 4.50e-142 425
Msa0802160 AT4G14360.2 41.774 541 291 8 69 595 73 603 4.50e-142 425
Msa0802160 AT1G77260.1 41.293 557 290 13 54 589 115 655 1.52e-140 423
Msa0802160 AT1G29470.1 42.669 532 269 13 81 595 250 762 6.89e-140 425
Msa0802160 AT1G29470.2 42.669 532 269 13 81 595 250 762 6.89e-140 425
Msa0802160 AT5G64030.1 43.100 529 268 11 81 593 308 819 7.21e-140 427
Msa0802160 AT2G40280.1 41.877 554 267 16 64 598 72 589 1.25e-137 413
Msa0802160 AT3G56080.1 43.238 525 257 14 81 592 114 610 1.99e-137 414
Msa0802160 AT5G14430.1 39.833 600 316 15 22 591 21 605 8.03e-137 412
Msa0802160 AT3G51070.1 41.308 535 273 12 81 595 381 894 1.23e-135 417
Msa0802160 AT5G14430.2 39.333 600 319 15 22 591 21 605 1.70e-134 406
Msa0802160 AT3G10200.1 37.124 598 334 13 16 590 10 588 9.44e-130 393
Msa0802160 AT1G26850.3 41.393 488 255 11 14 476 11 492 6.18e-128 385
Msa0802160 AT5G04060.1 36.529 605 335 12 16 590 12 597 1.52e-124 380
Msa0802160 AT3G56080.2 45.197 458 217 13 81 525 114 550 9.73e-124 376
Msa0802160 AT3G10200.2 36.007 586 326 13 16 571 10 576 6.15e-121 370
Msa0802160 AT3G51070.2 42.174 460 228 11 81 520 381 822 6.71e-118 370
Msa0802160 AT1G19430.1 36.243 527 290 15 80 592 230 724 3.02e-109 344
Msa0802160 AT1G19430.3 36.243 527 290 15 80 592 230 724 3.02e-109 344
Msa0802160 AT1G78240.1 31.086 608 354 17 22 587 92 676 8.28e-94 303
Msa0802160 AT1G78240.2 31.086 608 354 17 22 587 92 676 8.28e-94 303
Msa0802160 AT1G13860.4 31.588 554 313 11 72 591 81 602 5.25e-92 295
Msa0802160 AT1G13860.3 31.588 554 313 11 72 591 81 602 5.25e-92 295
Msa0802160 AT1G13860.1 31.588 554 313 11 72 591 81 602 5.25e-92 295
Msa0802160 AT1G13860.5 31.588 554 313 11 72 591 81 602 5.25e-92 295
Msa0802160 AT2G03480.2 32.092 564 316 14 52 587 66 590 1.96e-84 275
Msa0802160 AT2G03480.1 32.270 564 326 15 52 587 66 601 5.28e-84 275
Msa0802160 AT1G13860.2 31.828 465 265 9 156 589 1 444 2.00e-77 253
Msa0802160 AT1G19430.2 33.924 395 219 13 80 461 230 595 5.32e-64 221
Msa0802160 AT2G03480.3 30.882 340 217 7 52 382 66 396 1.46e-44 164

Find 185 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCGTCCCGGAGGATTT+TGG 0.137518 5_3:+16334813 Msa0802160:CDS
ATGAATGTTGTTTCATCTTA+TGG 0.183938 5_3:+16335376 Msa0802160:CDS
CTTATCCCATGGACAGAATT+TGG 0.187513 5_3:+16334541 Msa0802160:CDS
TCCCTTTGTTTCTCTACTTC+TGG 0.201038 5_3:-16336479 None:intergenic
TTTGAAACTTGACTGATTCT+TGG 0.212129 5_3:-16336565 None:intergenic
TGAACAAGTGAAATCCTTTC+AGG 0.225038 5_3:-16335181 None:intergenic
TCAAGACTGTCATCACATTT+TGG 0.235686 5_3:-16335043 None:intergenic
CCCTTCAAACTCCTTTGATA+TGG 0.267872 5_3:+16334501 Msa0802160:CDS
AGGAACCAATGAAAGAAATA+AGG 0.270277 5_3:-16331714 None:intergenic
GGAGAGAAATTTCAATTTCC+TGG 0.292268 5_3:+16334067 Msa0802160:CDS
TGCATGGGATTAAATGTATA+AGG 0.294395 5_3:+16336676 Msa0802160:three_prime_UTR
AGAAATAAGGGAGATTTGTT+TGG 0.295213 5_3:-16331701 None:intergenic
GAAGAATTCGGTGAATTTCT+TGG 0.297915 5_3:-16334796 None:intergenic
CTTGGTGGAGTCTTTAAATC+TGG 0.314276 5_3:+16333419 Msa0802160:CDS
ATCTCCCTTATTTCTTTCAT+TGG 0.318204 5_3:+16331709 Msa0802160:five_prime_UTR
TTCAACCTTTGAGGCCATTT+CGG 0.329744 5_3:-16335151 None:intergenic
TTGATAATCATTGCTGCATT+CGG 0.332172 5_3:-16333537 None:intergenic
CTTCAAATTATACAACAAAA+AGG 0.343104 5_3:+16334949 Msa0802160:CDS
CAACATTCATCTCTACTCTT+TGG 0.346033 5_3:-16333817 None:intergenic
ACTGACCCATCTTTGATTCC+TGG 0.346142 5_3:-16334151 None:intergenic
TTCTGTTGTGTGTTTATCAA+TGG 0.347914 5_3:-16331791 None:intergenic
AAAACTACAGGGAGTGTATT+AGG 0.348105 5_3:-16335400 None:intergenic
ATCATAGCAAGCGTTGTCTT+TGG 0.357055 5_3:-16334996 None:intergenic
CCTTGATCAATGATCCTTTG+TGG 0.361183 5_3:+16335350 Msa0802160:CDS
AAGAAGTTGTTGCCTGATCT+TGG 0.365039 5_3:+16335268 Msa0802160:CDS
GTTCTTTAGTACTATTTCCT+TGG 0.366358 5_3:+16332861 Msa0802160:intron
CTACTCTTTGGCCATCTGAT+TGG 0.368686 5_3:-16333805 None:intergenic
CTTGATCAATGATCCTTTGT+GGG 0.371015 5_3:+16335351 Msa0802160:CDS
GAAATAAGGGAGATTTGTTT+GGG 0.373469 5_3:-16331700 None:intergenic
TTATGATCATTTATAATTCA+AGG 0.378013 5_3:+16336835 Msa0802160:three_prime_UTR
TGATAATCATTGCTGCATTC+GGG 0.379226 5_3:-16333536 None:intergenic
CAGTCAACTATGAGCGTAGA+TGG 0.383909 5_3:+16334852 Msa0802160:CDS
CTCTTTGGCCATCTGATTGG+AGG 0.385100 5_3:-16333802 None:intergenic
TTACAGAGATGGAGAAAGTA+TGG 0.391225 5_3:+16333691 Msa0802160:intron
CGCGGTATCCCAGCAATTCT+TGG 0.393361 5_3:+16334451 Msa0802160:CDS
TAATCAGCATTGGTTGATAA+AGG 0.396465 5_3:+16334042 Msa0802160:CDS
GCCCGCCTGGTCGCAAAATC+CGG 0.400319 5_3:-16336232 None:intergenic
ATGGATATGAATACAGCTTA+TGG 0.401394 5_3:+16335313 Msa0802160:CDS
ATCTTGTTTGTGCCAAGATC+AGG 0.406150 5_3:-16335280 None:intergenic
CAAACTGAACCTGAGCTTCA+TGG 0.406657 5_3:-16334420 None:intergenic
ACATATTCACCAACACCATT+AGG 0.406899 5_3:-16334106 None:intergenic
ATTTATGTTAGGTTGCTAGC+TGG 0.410778 5_3:+16334341 Msa0802160:intron
ATCCTCCGGGACGAAGAATT+CGG 0.410892 5_3:-16334808 None:intergenic
CTGCATTCGGGAAAACTAAA+GGG 0.412194 5_3:-16333524 None:intergenic
GTTAGAACTGCAATTGATAC+TGG 0.412772 5_3:+16334172 Msa0802160:CDS
TGTTTGTTAATCCAATCATA+TGG 0.415030 5_3:-16334013 None:intergenic
TTTATGTTAGGTTGCTAGCT+GGG 0.415622 5_3:+16334342 Msa0802160:intron
TACCTATAGACTTACTTTGT+TGG 0.417092 5_3:+16333714 Msa0802160:CDS
GTCAGAGATCGGTTCTTGTT+CGG 0.419349 5_3:-16333353 None:intergenic
TAGCTGGGGCGGTGACTTGT+TGG 0.424219 5_3:+16334357 Msa0802160:CDS
GAGATGACACCAAGAATTGC+TGG 0.425210 5_3:-16334460 None:intergenic
CAAATTCTGTCCATGGGATA+AGG 0.432198 5_3:-16334540 None:intergenic
GCCTCACGTACATGCCGAAA+TGG 0.432992 5_3:+16335137 Msa0802160:CDS
GAAAGGATTTCACTTGTTCA+AGG 0.433009 5_3:+16335184 Msa0802160:CDS
ATGGAAAAGTACAAGAAATC+AGG 0.433649 5_3:+16335115 Msa0802160:CDS
GAAGTATGTAATGTTGGAAA+TGG 0.436291 5_3:+16336208 Msa0802160:CDS
GAAACAAAGGGAAACGAATT+CGG 0.437900 5_3:+16336490 Msa0802160:three_prime_UTR
CTGACCCATCTTTGATTCCT+GGG 0.449263 5_3:-16334150 None:intergenic
GGAGTGTACCATGCTGAATC+TGG 0.456691 5_3:-16335067 None:intergenic
GGGAGATTTGTTTGGGTGTG+AGG 0.464185 5_3:-16331693 None:intergenic
TAGATAATTTATTCTTTGCA+TGG 0.470045 5_3:+16336660 Msa0802160:three_prime_UTR
GAGATCGGTTCTTGTTCGGC+TGG 0.470906 5_3:-16333349 None:intergenic
TGAAGGAGGTCATAGGTTCT+AGG 0.475544 5_3:-16335595 None:intergenic
ACAGGAATGTGCCATATGAT+TGG 0.476125 5_3:+16334002 Msa0802160:intron
AGGCCTCGATCGAAAACTAC+AGG 0.476192 5_3:-16335412 None:intergenic
GGTGCAACATTCAACCTTTG+AGG 0.476749 5_3:-16335160 None:intergenic
GCTGCATTCGGGAAAACTAA+AGG 0.478763 5_3:-16333525 None:intergenic
AACAAGGATCATGAAGCATA+AGG 0.478806 5_3:+16333310 Msa0802160:exon
GGAACCAATGAAAGAAATAA+GGG 0.480182 5_3:-16331713 None:intergenic
TGAGCTTCATGGTTATCTCT+TGG 0.482556 5_3:-16334409 None:intergenic
TGAAATGAAGTATGTAATGT+TGG 0.482893 5_3:+16336202 Msa0802160:CDS
TAATGTGAAATTTGAAGAGA+TGG 0.485116 5_3:+16331564 Msa0802160:five_prime_UTR
TGTTGTGTGTTTATCAATGG+TGG 0.487427 5_3:-16331788 None:intergenic
ATCGGTTCTTGTTCGGCTGG+TGG 0.487576 5_3:-16333346 None:intergenic
GAATTACCAAATTCTGTCCA+TGG 0.489900 5_3:-16334547 None:intergenic
CTCATAGTTGACTGGTGGAC+CGG 0.491832 5_3:-16334843 None:intergenic
CATCTTGATCCTGAGTTGGA+TGG 0.492062 5_3:-16336398 None:intergenic
AGATAATTTATTCTTTGCAT+GGG 0.492796 5_3:+16336661 Msa0802160:three_prime_UTR
ATCATATTCTATGCTTTCTG+TGG 0.492910 5_3:-16336785 None:intergenic
TGAAGAGATGGAAATGAAAG+TGG 0.493444 5_3:+16331576 Msa0802160:five_prime_UTR
AAATTTCAATTTCCTGGTGG+AGG 0.497318 5_3:+16334073 Msa0802160:CDS
CTGATCCCAGGAATCAAAGA+TGG 0.497573 5_3:+16334145 Msa0802160:CDS
AAAAGGATGACATATATGTA+TGG 0.500938 5_3:+16334966 Msa0802160:CDS
TTCCAACAAAGTAAGTCTAT+AGG 0.502688 5_3:-16333716 None:intergenic
TCATATTCTATGCTTTCTGT+GGG 0.503470 5_3:-16336784 None:intergenic
TGCTTAGTTCCTCCTCCACC+TGG 0.503617 5_3:+16333772 Msa0802160:CDS
CAGCTCAGACCAATGTGAAA+AGG 0.504433 5_3:-16332892 None:intergenic
TGACATATATGTATGGCAAA+AGG 0.507120 5_3:+16334973 Msa0802160:CDS
GGCTTGTAACCAGGTGGAGG+AGG 0.514187 5_3:-16333781 None:intergenic
AAAGAGCCTGAGGATTGCTT+AGG 0.516610 5_3:-16333491 None:intergenic
AGTTTCAAACATACCAGTCA+TGG 0.518005 5_3:-16335447 None:intergenic
GTAGAGATGAATGTTGGTAC+AGG 0.518059 5_3:+16333824 Msa0802160:CDS
TTATCGGTACCTTCCATGAC+TGG 0.519417 5_3:+16335434 Msa0802160:CDS
CTGATTGGAGGCTTGTAACC+AGG 0.520163 5_3:-16333790 None:intergenic
TCAGTCATGATAACAGTAAG+TGG 0.521028 5_3:+16335224 Msa0802160:CDS
TTTGGAGGATAGGTGTCTCT+AGG 0.521324 5_3:-16335025 None:intergenic
GCCATATCAAAGGAGTTTGA+AGG 0.521561 5_3:-16334502 None:intergenic
CATCTACGCTCATAGTTGAC+TGG 0.523463 5_3:-16334851 None:intergenic
GGACAAAACCCAAAATCCTC+CGG 0.525700 5_3:-16334822 None:intergenic
GGAGGTACTATGTTTCCTAA+TGG 0.527366 5_3:+16334091 Msa0802160:CDS
AAGAGATAACCATGAAGCTC+AGG 0.528994 5_3:+16334411 Msa0802160:CDS
TTGTCATCTTGATCCTGAGT+TGG 0.530646 5_3:-16336402 None:intergenic
ATGAGCGTAGATGGCGCGGA+TGG 0.530662 5_3:+16334861 Msa0802160:CDS
ATCAGCATGAAGGAGGTCAT+AGG 0.531348 5_3:-16335602 None:intergenic
AATTCTTCACATGAATCACT+TGG 0.533691 5_3:-16336748 None:intergenic
TATGACCTCCTTCATGCTGA+TGG 0.535477 5_3:+16335604 Msa0802160:CDS
TCTTCACTGCTGAAAGCCAC+AGG 0.536372 5_3:+16335629 Msa0802160:CDS
GGTTGAATGTTGCACCTGAA+AGG 0.539137 5_3:+16335167 Msa0802160:CDS
CCACAAAGGATCATTGATCA+AGG 0.542881 5_3:-16335350 None:intergenic
TGCCATTGCAACTATTGCGA+AGG 0.544120 5_3:+16336289 Msa0802160:CDS
ATGTAATGTTGGAAATGGAC+CGG 0.544880 5_3:+16336213 Msa0802160:CDS
AAACAAGATAAGAAATGTGA+TGG 0.544976 5_3:+16335294 Msa0802160:CDS
AACAGAAGTCTAATCAGCAT+TGG 0.548252 5_3:+16334032 Msa0802160:CDS
TGAGAAGAAGAAGAAGTGAA+AGG 0.550224 5_3:-16331734 None:intergenic
TTCCAGAAGTAGAGAAACAA+AGG 0.550685 5_3:+16336477 Msa0802160:three_prime_UTR
GCCCTTCGCAATAGTTGCAA+TGG 0.550946 5_3:-16336291 None:intergenic
TCAAAGGAGTTTGAAGGGAA+AGG 0.552291 5_3:-16334496 None:intergenic
GTCTTTAAATCTGGAAACAA+TGG 0.552619 5_3:+16333428 Msa0802160:CDS
TTAATGCAAGATCTGATCCC+AGG 0.555758 5_3:+16334133 Msa0802160:CDS
TGATCGCCGCAGTCAGAGAT+CGG 0.556133 5_3:-16333364 None:intergenic
CAGCATTGGTTGATAAAGGA+AGG 0.557499 5_3:+16334046 Msa0802160:CDS
CTTAATTTGCAAAGAGCCTG+AGG 0.559105 5_3:-16333501 None:intergenic
GAGATGGAAATGAAAGTGGA+AGG 0.559591 5_3:+16331580 Msa0802160:five_prime_UTR
TTATGTTAGGTTGCTAGCTG+GGG 0.559993 5_3:+16334343 Msa0802160:intron
ACATGCCGAAATGGCCTCAA+AGG 0.560915 5_3:+16335146 Msa0802160:CDS
GTCGAATTGCGATTAATCGC+GGG 0.562441 5_3:+16332967 Msa0802160:five_prime_UTR
CCATATCAAAGGAGTTTGAA+GGG 0.568671 5_3:-16334501 None:intergenic
GATTCACCTAAGCAATCCTC+AGG 0.569880 5_3:+16333485 Msa0802160:CDS
TTATTATAGTCTTACTCTCG+TGG 0.569884 5_3:+16332920 Msa0802160:five_prime_UTR
ATCACTATCATTGTTCTGTG+TGG 0.571055 5_3:+16333383 Msa0802160:CDS
GAGAAATTTCAATTTCCTGG+TGG 0.571653 5_3:+16334070 Msa0802160:CDS
TCCAGAAGTAGAGAAACAAA+GGG 0.571807 5_3:+16336478 Msa0802160:three_prime_UTR
CCGCAAAATAACTTGACTCT+CGG 0.573098 5_3:-16336265 None:intergenic
CTGTGGCAGCCATCCAACTC+AGG 0.575238 5_3:+16336389 Msa0802160:CDS
GACAAAACCCAAAATCCTCC+GGG 0.575836 5_3:-16334821 None:intergenic
TGTTAGGTTGCTAGCTGGGG+CGG 0.577359 5_3:+16334346 Msa0802160:intron
AGGATCATGAAGCATAAGGA+TGG 0.579185 5_3:+16333314 Msa0802160:exon
AATTACCAAATTCTGTCCAT+GGG 0.580974 5_3:-16334546 None:intergenic
AGTCATGGAAGGTACCGATA+AGG 0.582392 5_3:-16335432 None:intergenic
AATACCTTTGGATCTGTGCA+TGG 0.582765 5_3:-16333569 None:intergenic
CTGCAATTGATACTGGTTGT+GGG 0.583160 5_3:+16334179 Msa0802160:CDS
TACTCCATGCACAGATCCAA+AGG 0.583464 5_3:+16333565 Msa0802160:CDS
ATTCACCGAATTCTTCGTCC+CGG 0.585958 5_3:+16334803 Msa0802160:CDS
GCTCTAGATGCCTTATCCCA+TGG 0.586277 5_3:+16334530 Msa0802160:CDS
CAAAGAGTAGAGATGAATGT+TGG 0.586343 5_3:+16333818 Msa0802160:CDS
GCCATTTCGGCATGTACGTG+AGG 0.586487 5_3:-16335138 None:intergenic
AACTATGAGCGTAGATGGCG+CGG 0.587927 5_3:+16334857 Msa0802160:CDS
CACCGAATTCTTCGTCCCGG+AGG 0.588572 5_3:+16334806 Msa0802160:CDS
TGGGTGTGAGGCTAAACTAA+AGG 0.592585 5_3:-16331681 None:intergenic
TGAAGAATCCATCAGCATGA+AGG 0.594586 5_3:-16335612 None:intergenic
ACTATGTTTCCTAATGGTGT+TGG 0.597032 5_3:+16334097 Msa0802160:CDS
ACTGCAATTGATACTGGTTG+TGG 0.599923 5_3:+16334178 Msa0802160:CDS
GGAGGCTTGTAACCAGGTGG+AGG 0.602271 5_3:-16333784 None:intergenic
GGCGGTGACTTGTTGGATCG+AGG 0.603333 5_3:+16334364 Msa0802160:CDS
AGATGACACCAAGAATTGCT+GGG 0.605182 5_3:-16334459 None:intergenic
ACACACAACAGAACAAAACA+AGG 0.605314 5_3:+16331801 Msa0802160:five_prime_UTR
GCCATTGCAACTATTGCGAA+GGG 0.608094 5_3:+16336290 Msa0802160:CDS
TGTTTATCAATGGTGGAATG+TGG 0.609278 5_3:-16331781 None:intergenic
TGTCGAATTGCGATTAATCG+CGG 0.610314 5_3:+16332966 Msa0802160:five_prime_UTR
CTATTGCGAAGGGCATGAGA+TGG 0.612026 5_3:+16336300 Msa0802160:CDS
TGATCCCAGGAATCAAAGAT+GGG 0.614158 5_3:+16334146 Msa0802160:CDS
GTTACAAGCCTCCAATCAGA+TGG 0.620710 5_3:+16333794 Msa0802160:CDS
CTACGCTCATAGTTGACTGG+TGG 0.622282 5_3:-16334848 None:intergenic
TGAATCAAGTGATTTCTGAA+TGG 0.624350 5_3:-16333468 None:intergenic
AGAGGGGACAGCAAGGCACA+TGG 0.634467 5_3:+16331623 Msa0802160:five_prime_UTR
GTTCAGTTTGCTCTCGAGCG+CGG 0.634804 5_3:+16334433 Msa0802160:CDS
GATATGAATACAGCTTATGG+AGG 0.639260 5_3:+16335316 Msa0802160:CDS
AGAGCAATGAGCCATATCAA+AGG 0.654623 5_3:-16334512 None:intergenic
TGTGCAGCGGTAAGAAAGAG+CGG 0.655186 5_3:+16336436 Msa0802160:three_prime_UTR
ACAACATTCATAACCCACAA+AGG 0.657750 5_3:-16335364 None:intergenic
AGAATCCATCAGCATGAAGG+AGG 0.658380 5_3:-16335609 None:intergenic
GTCTTGAACCAGATTCAGCA+TGG 0.660598 5_3:+16335059 Msa0802160:CDS
TCAAACATACCAGTCATGGA+AGG 0.663945 5_3:-16335443 None:intergenic
GGCCTCGATCGAAAACTACA+GGG 0.664815 5_3:-16335411 None:intergenic
TGCAATTGATACTGGTTGTG+GGG 0.666739 5_3:+16334180 Msa0802160:CDS
ACAACAAAACAAGCGCGAAG+CGG 0.670028 5_3:-16335088 None:intergenic
ATTGGAGGCTTGTAACCAGG+TGG 0.670716 5_3:-16333787 None:intergenic
GTGAAAAGGAACAAGAACCA+AGG 0.676848 5_3:-16332878 None:intergenic
CACACAACAGAACAAAACAA+GGG 0.684665 5_3:+16331802 Msa0802160:five_prime_UTR
GGAAACATAGTACCTCCACC+AGG 0.698372 5_3:-16334085 None:intergenic
GCGCGGATGGAACACAACGG+TGG 0.706806 5_3:+16334874 Msa0802160:CDS
CAAGAACCGATCTCTGACTG+CGG 0.721103 5_3:+16333358 Msa0802160:CDS
CAGATTTAAAGACTCCACCA+AGG 0.721559 5_3:-16333418 None:intergenic
AAACTCATGAAACTGTGCAG+CGG 0.723711 5_3:+16336423 Msa0802160:three_prime_UTR
ATGGCGCGGATGGAACACAA+CGG 0.806331 5_3:+16334871 Msa0802160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GCAAAAATAGTTTATATAAA+TGG + chr5_3:16331650-16331669 Msa0802160:five_prime_UTR 15.0%
!! TAAAAAAGAATGAATGAAAA+TGG - chr5_3:16331834-16331853 None:intergenic 15.0%
!! TAATTGTAAAAAGGTTAAAA+GGG - chr5_3:16332056-16332075 None:intergenic 15.0%
!! ATAATTGTAAAAAGGTTAAA+AGG - chr5_3:16332057-16332076 None:intergenic 15.0%
!! TTGATTGAATAATTGTAAAA+AGG - chr5_3:16332065-16332084 None:intergenic 15.0%
!!! TTTTTGAATTTTGATTATGT+CGG + chr5_3:16332562-16332581 Msa0802160:intron 15.0%
!! TTAGTATTAATTAATACCTT+TGG - chr5_3:16333584-16333603 None:intergenic 15.0%
!!! TTTGTATTTTTACTTATTAC+CGG + chr5_3:16334255-16334274 Msa0802160:intron 15.0%
!! TATAAGCACTTATAATAATA+TGG + chr5_3:16335708-16335727 Msa0802160:intron 15.0%
!! ATAAACTAAAAACAACTTAT+TGG - chr5_3:16335973-16335992 None:intergenic 15.0%
!! TTATGATCATTTATAATTCA+AGG + chr5_3:16336835-16336854 Msa0802160:three_prime_UTR 15.0%
!! TAAATCATAACCAATTAGAA+TGG + chr5_3:16332161-16332180 Msa0802160:intron 20.0%
!! AATATTCCTATACACAAAAA+AGG - chr5_3:16332387-16332406 None:intergenic 20.0%
!! GAAAGAGAAACAAAAAAAAA+AGG - chr5_3:16332707-16332726 None:intergenic 20.0%
!!! AGAACAAATATCTAGAATTA+TGG - chr5_3:16333118-16333137 None:intergenic 20.0%
!! AATGATATGAATATGATTCA+TGG + chr5_3:16333200-16333219 Msa0802160:intron 20.0%
!! AAGAAGTAAAAGTAAAAAGA+AGG - chr5_3:16334216-16334235 None:intergenic 20.0%
!!! CTTTTACTTCTTTTTACAAT+TGG + chr5_3:16334224-16334243 Msa0802160:intron 20.0%
!! AAGTAAAAATACAAAGAAAG+CGG - chr5_3:16334250-16334269 None:intergenic 20.0%
!!! TATTCATATCTTATGCTTTT+AGG + chr5_3:16334761-16334780 Msa0802160:intron 20.0%
!! CTTCAAATTATACAACAAAA+AGG + chr5_3:16334949-16334968 Msa0802160:CDS 20.0%
!!! TGTTTTTGTGTTATATCATA+TGG + chr5_3:16335504-16335523 Msa0802160:intron 20.0%
!! AACAACTTATAACATATAGA+TGG - chr5_3:16335745-16335764 None:intergenic 20.0%
!!! TTTGTTATAAGATAAGTCTA+AGG + chr5_3:16335856-16335875 Msa0802160:intron 20.0%
!! TTGTTATAAGATAAGTCTAA+GGG + chr5_3:16335857-16335876 Msa0802160:intron 20.0%
!! TAGATAATTTATTCTTTGCA+TGG + chr5_3:16336660-16336679 Msa0802160:three_prime_UTR 20.0%
!! AGATAATTTATTCTTTGCAT+GGG + chr5_3:16336661-16336680 Msa0802160:three_prime_UTR 20.0%
!! AAAAAATAGATAAACAAGAG+TGG - chr5_3:16336706-16336725 None:intergenic 20.0%
! TAATGTGAAATTTGAAGAGA+TGG + chr5_3:16331564-16331583 Msa0802160:five_prime_UTR 25.0%
! TTGAAGATTGAACAAAAAGA+GGG + chr5_3:16331606-16331625 Msa0802160:five_prime_UTR 25.0%
! AATAGCTTTCTAAATCCAAA+TGG - chr5_3:16331932-16331951 None:intergenic 25.0%
! TATTCAATCAAAACTCAAAG+TGG + chr5_3:16332074-16332093 Msa0802160:intron 25.0%
! ATTCAATCAAAACTCAAAGT+GGG + chr5_3:16332075-16332094 Msa0802160:intron 25.0%
!!! AGGATCTTTTTCAATAATCT+TGG - chr5_3:16332104-16332123 None:intergenic 25.0%
! AGAAATCAGAGAAAAAAGAA+AGG - chr5_3:16332124-16332143 None:intergenic 25.0%
! AAAACTAATGAAGAAACAGT+GGG - chr5_3:16332209-16332228 None:intergenic 25.0%
! TAAAACTAATGAAGAAACAG+TGG - chr5_3:16332210-16332229 None:intergenic 25.0%
! ATTCAGAACTATGATACAAA+TGG - chr5_3:16332260-16332279 None:intergenic 25.0%
! CTATACACAAAAAAGGTAAA+GGG - chr5_3:16332380-16332399 None:intergenic 25.0%
! TATTATGTTCACATGACATT+GGG - chr5_3:16332499-16332518 None:intergenic 25.0%
! TTATTATGTTCACATGACAT+TGG - chr5_3:16332500-16332519 None:intergenic 25.0%
! GAGAAAGTAAGGTAAATAAA+TGG - chr5_3:16332617-16332636 None:intergenic 25.0%
!! TTGTTTCTCTTTCCTTAAAT+TGG + chr5_3:16332714-16332733 Msa0802160:intron 25.0%
!!! GGTAATTGCAGTTTTAATTA+CGG + chr5_3:16332988-16333007 Msa0802160:intron 25.0%
! ACTGATTACTATGTTTACTA+TGG + chr5_3:16333171-16333190 Msa0802160:intron 25.0%
! AGTTAGTGGAATAAAAAACA+AGG + chr5_3:16333294-16333313 Msa0802160:five_prime_UTR 25.0%
!!! TCTACGAAAATTTTGATGTT+TGG + chr5_3:16333610-16333629 Msa0802160:intron 25.0%
!! TGTTTGTTAATCCAATCATA+TGG - chr5_3:16334016-16334035 None:intergenic 25.0%
! AAAACATAGCATAAACAGAA+AGG - chr5_3:16334618-16334637 None:intergenic 25.0%
!! AATTTTCATCCATTAACTGA+TGG + chr5_3:16334735-16334754 Msa0802160:intron 25.0%
!! ATTTTCATCCATTAACTGAT+GGG + chr5_3:16334736-16334755 Msa0802160:intron 25.0%
! AAAAGGATGACATATATGTA+TGG + chr5_3:16334966-16334985 Msa0802160:CDS 25.0%
! AAACAAGATAAGAAATGTGA+TGG + chr5_3:16335294-16335313 Msa0802160:CDS 25.0%
!!! ATGAATGTTGTTTCATCTTA+TGG + chr5_3:16335376-16335395 Msa0802160:CDS 25.0%
! AACTCTAAATATGAACCATA+AGG + chr5_3:16335466-16335485 Msa0802160:intron 25.0%
! TGTTATAAGATAAGTCTAAG+GGG + chr5_3:16335858-16335877 Msa0802160:intron 25.0%
!!! GCATTTTGAAAATCTTGTTT+AGG - chr5_3:16336137-16336156 None:intergenic 25.0%
! TGAAATGAAGTATGTAATGT+TGG + chr5_3:16336202-16336221 Msa0802160:CDS 25.0%
! TGTTGAAAAAGAGAAGATAT+TGG + chr5_3:16336352-16336371 Msa0802160:CDS 25.0%
!! ATCAATCTTTTTGTTAAGAG+TGG - chr5_3:16336518-16336537 None:intergenic 25.0%
GTTGAAGATTGAACAAAAAG+AGG + chr5_3:16331605-16331624 Msa0802160:five_prime_UTR 30.0%
TGAAGATTGAACAAAAAGAG+GGG + chr5_3:16331607-16331626 Msa0802160:five_prime_UTR 30.0%
! GAAATAAGGGAGATTTGTTT+GGG - chr5_3:16331703-16331722 None:intergenic 30.0%
! AGAAATAAGGGAGATTTGTT+TGG - chr5_3:16331704-16331723 None:intergenic 30.0%
! ATCTCCCTTATTTCTTTCAT+TGG + chr5_3:16331709-16331728 Msa0802160:five_prime_UTR 30.0%
GGAACCAATGAAAGAAATAA+GGG - chr5_3:16331716-16331735 None:intergenic 30.0%
AGGAACCAATGAAAGAAATA+AGG - chr5_3:16331717-16331736 None:intergenic 30.0%
TTCTGTTGTGTGTTTATCAA+TGG - chr5_3:16331794-16331813 None:intergenic 30.0%
AACAGAAACACAAAAAACAG+AGG - chr5_3:16331975-16331994 None:intergenic 30.0%
!! GTGTTTCTGTTTAGTACTTT+TGG + chr5_3:16331984-16332003 Msa0802160:intron 30.0%
TTCAATCAAAACTCAAAGTG+GGG + chr5_3:16332076-16332095 Msa0802160:intron 30.0%
GGTTATGATTTAGAAAACAG+AGG - chr5_3:16332153-16332172 None:intergenic 30.0%
CCTATACACAAAAAAGGTAA+AGG - chr5_3:16332381-16332400 None:intergenic 30.0%
!!! CCTTTACCTTTTTTGTGTAT+AGG + chr5_3:16332378-16332397 Msa0802160:intron 30.0%
! AAAAAAGCATAATGTGAAGC+TGG - chr5_3:16332429-16332448 None:intergenic 30.0%
!!! TTTTTTTGTTGAGTCAGTGA+TGG + chr5_3:16332453-16332472 Msa0802160:intron 30.0%
!!! TTGAATTTTGATTATGTCGG+TGG + chr5_3:16332565-16332584 Msa0802160:intron 30.0%
GTTCTTTAGTACTATTTCCT+TGG + chr5_3:16332861-16332880 Msa0802160:intron 30.0%
! TTATTATAGTCTTACTCTCG+TGG + chr5_3:16332920-16332939 Msa0802160:five_prime_UTR 30.0%
CTTGATCTGAATTAACACTA+AGG - chr5_3:16333071-16333090 None:intergenic 30.0%
TACTATGTTTACTATGGTTG+AGG + chr5_3:16333177-16333196 Msa0802160:intron 30.0%
TATGATTCATGGTATGTTTG+TGG + chr5_3:16333211-16333230 Msa0802160:intron 30.0%
GTCTTTAAATCTGGAAACAA+TGG + chr5_3:16333428-16333447 Msa0802160:CDS 30.0%
TGAATCAAGTGATTTCTGAA+TGG - chr5_3:16333471-16333490 None:intergenic 30.0%
! TTGATAATCATTGCTGCATT+CGG - chr5_3:16333540-16333559 None:intergenic 30.0%
TACCTATAGACTTACTTTGT+TGG + chr5_3:16333714-16333733 Msa0802160:CDS 30.0%
TTCCAACAAAGTAAGTCTAT+AGG - chr5_3:16333719-16333738 None:intergenic 30.0%
CATTCTTTCCTCTCAAAAAT+CGG - chr5_3:16333754-16333773 None:intergenic 30.0%
GTGTTACATGAATAAATGAC+AGG + chr5_3:16333984-16334003 Msa0802160:intron 30.0%
!! TAATCAGCATTGGTTGATAA+AGG + chr5_3:16334042-16334061 Msa0802160:CDS 30.0%
TAACATAAATCGGAGTTATG+TGG - chr5_3:16334331-16334350 None:intergenic 30.0%
ACATAACTCCGATTTATGTT+AGG + chr5_3:16334330-16334349 Msa0802160:intron 30.0%
AATTACCAAATTCTGTCCAT+GGG - chr5_3:16334549-16334568 None:intergenic 30.0%
ATGAAACTGTTTCATTATGC+TGG - chr5_3:16334652-16334671 None:intergenic 30.0%
TGAATATTCCCATCAGTTAA+TGG - chr5_3:16334747-16334766 None:intergenic 30.0%
! TCATATCTTATGCTTTTAGG+TGG + chr5_3:16334764-16334783 Msa0802160:intron 30.0%
TGACATATATGTATGGCAAA+AGG + chr5_3:16334973-16334992 Msa0802160:CDS 30.0%
! GATTTCTTGTACTTTTCCAT+TGG - chr5_3:16335115-16335134 None:intergenic 30.0%
! ATGGAAAAGTACAAGAAATC+AGG + chr5_3:16335115-16335134 Msa0802160:CDS 30.0%
ATGGATATGAATACAGCTTA+TGG + chr5_3:16335313-16335332 Msa0802160:CDS 30.0%
ACCATAAGGTTATGTGTTTA+TGG + chr5_3:16335480-16335499 Msa0802160:intron 30.0%
TCCATAAACACATAACCTTA+TGG - chr5_3:16335484-16335503 None:intergenic 30.0%
TATGCTATAAACGCTTAGTT+AGG + chr5_3:16336092-16336111 Msa0802160:intron 30.0%
GAAGTATGTAATGTTGGAAA+TGG + chr5_3:16336208-16336227 Msa0802160:CDS 30.0%
! TTTGAAACTTGACTGATTCT+TGG - chr5_3:16336568-16336587 None:intergenic 30.0%
TGCATGGGATTAAATGTATA+AGG + chr5_3:16336676-16336695 Msa0802160:three_prime_UTR 30.0%
AATTCTTCACATGAATCACT+TGG - chr5_3:16336751-16336770 None:intergenic 30.0%
TCATATTCTATGCTTTCTGT+GGG - chr5_3:16336787-16336806 None:intergenic 30.0%
ATCATATTCTATGCTTTCTG+TGG - chr5_3:16336788-16336807 None:intergenic 30.0%
TGAAGAGATGGAAATGAAAG+TGG + chr5_3:16331576-16331595 Msa0802160:five_prime_UTR 35.0%
TGAGAAGAAGAAGAAGTGAA+AGG - chr5_3:16331737-16331756 None:intergenic 35.0%
! TGTTTATCAATGGTGGAATG+TGG - chr5_3:16331784-16331803 None:intergenic 35.0%
TGTTGTGTGTTTATCAATGG+TGG - chr5_3:16331791-16331810 None:intergenic 35.0%
ACACACAACAGAACAAAACA+AGG + chr5_3:16331801-16331820 Msa0802160:five_prime_UTR 35.0%
CACACAACAGAACAAAACAA+GGG + chr5_3:16331802-16331821 Msa0802160:five_prime_UTR 35.0%
CTTCTTCTAACAGATCCATT+TGG + chr5_3:16331914-16331933 Msa0802160:intron 35.0%
ACAAAAAACAGAGGAAACAG+GGG - chr5_3:16331966-16331985 None:intergenic 35.0%
CACAAAAAACAGAGGAAACA+GGG - chr5_3:16331967-16331986 None:intergenic 35.0%
ACACAAAAAACAGAGGAAAC+AGG - chr5_3:16331968-16331987 None:intergenic 35.0%
!!! TCTGGCTTTTCCATTCTAAT+TGG - chr5_3:16332174-16332193 None:intergenic 35.0%
!!! CATGAGTTTTGTTTTGTCAG+TGG - chr5_3:16332310-16332329 None:intergenic 35.0%
!!! TTGCTCCCATGTTGTTTTAA+TGG + chr5_3:16332639-16332658 Msa0802160:intron 35.0%
!!! TCCCATGTTGTTTTAATGGT+CGG + chr5_3:16332643-16332662 Msa0802160:intron 35.0%
ACCGACCATTAAAACAACAT+GGG - chr5_3:16332647-16332666 None:intergenic 35.0%
!!! GTGTGGTTTTATTCATTAGC+TGG + chr5_3:16332665-16332684 Msa0802160:intron 35.0%
CCAATGACAGATCCAATTTA+AGG - chr5_3:16332729-16332748 None:intergenic 35.0%
CCTTAAATTGGATCTGTCAT+TGG + chr5_3:16332726-16332745 Msa0802160:intron 35.0%
TTATGTCTGTCACATTGATC+TGG + chr5_3:16332757-16332776 Msa0802160:intron 35.0%
GTACTAAAGAACAGCAACAA+AGG - chr5_3:16332853-16332872 None:intergenic 35.0%
! GTTCTTGTTCCTTTTCACAT+TGG + chr5_3:16332883-16332902 Msa0802160:five_prime_UTR 35.0%
! CTTTTTGTGCAGATAGTTAG+TGG + chr5_3:16333280-16333299 Msa0802160:intron 35.0%
AACAAGGATCATGAAGCATA+AGG + chr5_3:16333310-16333329 Msa0802160:exon 35.0%
ATCACTATCATTGTTCTGTG+TGG + chr5_3:16333383-16333402 Msa0802160:CDS 35.0%
! TGTGGTTTTTCATTCTACCT+TGG + chr5_3:16333401-16333420 Msa0802160:CDS 35.0%
TGATAATCATTGCTGCATTC+GGG - chr5_3:16333539-16333558 None:intergenic 35.0%
!!! TGTTGATTGAGTTTTGAGCA+TGG + chr5_3:16333662-16333681 Msa0802160:intron 35.0%
! CATGGATGATTTTACAGAGA+TGG + chr5_3:16333680-16333699 Msa0802160:intron 35.0%
TTACAGAGATGGAGAAAGTA+TGG + chr5_3:16333691-16333710 Msa0802160:intron 35.0%
CAACATTCATCTCTACTCTT+TGG - chr5_3:16333820-16333839 None:intergenic 35.0%
CAAAGAGTAGAGATGAATGT+TGG + chr5_3:16333818-16333837 Msa0802160:CDS 35.0%
AACAGAAGTCTAATCAGCAT+TGG + chr5_3:16334032-16334051 Msa0802160:CDS 35.0%
GGAGAGAAATTTCAATTTCC+TGG + chr5_3:16334067-16334086 Msa0802160:CDS 35.0%
GAGAAATTTCAATTTCCTGG+TGG + chr5_3:16334070-16334089 Msa0802160:CDS 35.0%
AAATTTCAATTTCCTGGTGG+AGG + chr5_3:16334073-16334092 Msa0802160:CDS 35.0%
ACTATGTTTCCTAATGGTGT+TGG + chr5_3:16334097-16334116 Msa0802160:CDS 35.0%
ACATATTCACCAACACCATT+AGG - chr5_3:16334109-16334128 None:intergenic 35.0%
GTTAGAACTGCAATTGATAC+TGG + chr5_3:16334172-16334191 Msa0802160:CDS 35.0%
GCTAGCAACCTAACATAAAT+CGG - chr5_3:16334341-16334360 None:intergenic 35.0%
! ATTTATGTTAGGTTGCTAGC+TGG + chr5_3:16334341-16334360 Msa0802160:intron 35.0%
! TTTATGTTAGGTTGCTAGCT+GGG + chr5_3:16334342-16334361 Msa0802160:intron 35.0%
CCATATCAAAGGAGTTTGAA+GGG - chr5_3:16334504-16334523 None:intergenic 35.0%
GAATTACCAAATTCTGTCCA+TGG - chr5_3:16334550-16334569 None:intergenic 35.0%
! GAAGAATTCGGTGAATTTCT+TGG - chr5_3:16334799-16334818 None:intergenic 35.0%
! TCAAGACTGTCATCACATTT+TGG - chr5_3:16335046-16335065 None:intergenic 35.0%
TGAACAAGTGAAATCCTTTC+AGG - chr5_3:16335184-16335203 None:intergenic 35.0%
GAAAGGATTTCACTTGTTCA+AGG + chr5_3:16335184-16335203 Msa0802160:CDS 35.0%
TCAGTCATGATAACAGTAAG+TGG + chr5_3:16335224-16335243 Msa0802160:CDS 35.0%
GATATGAATACAGCTTATGG+AGG + chr5_3:16335316-16335335 Msa0802160:CDS 35.0%
CTTGATCAATGATCCTTTGT+GGG + chr5_3:16335351-16335370 Msa0802160:CDS 35.0%
ACAACATTCATAACCCACAA+AGG - chr5_3:16335367-16335386 None:intergenic 35.0%
! AAAACTACAGGGAGTGTATT+AGG - chr5_3:16335403-16335422 None:intergenic 35.0%
AGTTTCAAACATACCAGTCA+TGG - chr5_3:16335450-16335469 None:intergenic 35.0%
! TCATGATGTCTTGTGCTATT+AGG + chr5_3:16335551-16335570 Msa0802160:intron 35.0%
!!! TGTTTTCTGAAACTATCACG+AGG + chr5_3:16335761-16335780 Msa0802160:intron 35.0%
TAGGCTGTTTATCCAAACTT+TGG + chr5_3:16336111-16336130 Msa0802160:intron 35.0%
! ATCTTGTTTAGGCCAAAGTT+TGG - chr5_3:16336126-16336145 None:intergenic 35.0%
ATGTAATGTTGGAAATGGAC+CGG + chr5_3:16336213-16336232 Msa0802160:CDS 35.0%
TTCCAGAAGTAGAGAAACAA+AGG + chr5_3:16336477-16336496 Msa0802160:three_prime_UTR 35.0%
TCCAGAAGTAGAGAAACAAA+GGG + chr5_3:16336478-16336497 Msa0802160:three_prime_UTR 35.0%
GAAACAAAGGGAAACGAATT+CGG + chr5_3:16336490-16336509 Msa0802160:three_prime_UTR 35.0%
GAGATGGAAATGAAAGTGGA+AGG + chr5_3:16331580-16331599 Msa0802160:five_prime_UTR 40.0%
ATGTGGAAAAAACAGGGGAA+TGG - chr5_3:16331767-16331786 None:intergenic 40.0%
GTGGAATGTGGAAAAAACAG+GGG - chr5_3:16331772-16331791 None:intergenic 40.0%
GGTGGAATGTGGAAAAAACA+GGG - chr5_3:16331773-16331792 None:intergenic 40.0%
TGGTGGAATGTGGAAAAAAC+AGG - chr5_3:16331774-16331793 None:intergenic 40.0%
!! AGTGGGAATGCTTTTTGTTC+TGG - chr5_3:16332192-16332211 None:intergenic 40.0%
! TTTTGTTGAGTCAGTGATGG+AGG + chr5_3:16332456-16332475 Msa0802160:intron 40.0%
ATGGAGGCTATGTCCTAAAT+GGG + chr5_3:16332472-16332491 Msa0802160:intron 40.0%
GACATCAAATGTCAAGTAGC+TGG + chr5_3:16332532-16332551 Msa0802160:intron 40.0%
CACCGACCATTAAAACAACA+TGG - chr5_3:16332648-16332667 None:intergenic 40.0%
!!! TGTTGTTTTAATGGTCGGTG+TGG + chr5_3:16332648-16332667 Msa0802160:intron 40.0%
TCTGTCACATTGATCTGGTT+GGG + chr5_3:16332762-16332781 Msa0802160:intron 40.0%
CTAAAGAACAGCAACAAAGG+AGG - chr5_3:16332850-16332869 None:intergenic 40.0%
GTGAAAAGGAACAAGAACCA+AGG - chr5_3:16332881-16332900 None:intergenic 40.0%
TGTCGAATTGCGATTAATCG+CGG + chr5_3:16332966-16332985 Msa0802160:five_prime_UTR 40.0%
GATTCATGGTATGTTTGTGG+AGG + chr5_3:16333214-16333233 Msa0802160:intron 40.0%
AGGATCATGAAGCATAAGGA+TGG + chr5_3:16333314-16333333 Msa0802160:exon 40.0%
! GGTTTTTCATTCTACCTTGG+TGG + chr5_3:16333404-16333423 Msa0802160:CDS 40.0%
CAGATTTAAAGACTCCACCA+AGG - chr5_3:16333421-16333440 None:intergenic 40.0%
CTTGGTGGAGTCTTTAAATC+TGG + chr5_3:16333419-16333438 Msa0802160:CDS 40.0%
!! CTTAATTTGCAAAGAGCCTG+AGG - chr5_3:16333504-16333523 None:intergenic 40.0%
CTGCATTCGGGAAAACTAAA+GGG - chr5_3:16333527-16333546 None:intergenic 40.0%
AATACCTTTGGATCTGTGCA+TGG - chr5_3:16333572-16333591 None:intergenic 40.0%
CTTTCCTCTCAAAAATCGGA+GGG - chr5_3:16333750-16333769 None:intergenic 40.0%
TCTTTCCTCTCAAAAATCGG+AGG - chr5_3:16333751-16333770 None:intergenic 40.0%
GTAGAGATGAATGTTGGTAC+AGG + chr5_3:16333824-16333843 Msa0802160:CDS 40.0%
ACAGGAATGTGCCATATGAT+TGG + chr5_3:16334002-16334021 Msa0802160:intron 40.0%
!! CAGCATTGGTTGATAAAGGA+AGG + chr5_3:16334046-16334065 Msa0802160:CDS 40.0%
!! GGAGGTACTATGTTTCCTAA+TGG + chr5_3:16334091-16334110 Msa0802160:CDS 40.0%
TTAATGCAAGATCTGATCCC+AGG + chr5_3:16334133-16334152 Msa0802160:CDS 40.0%
TGATCCCAGGAATCAAAGAT+GGG + chr5_3:16334146-16334165 Msa0802160:CDS 40.0%
! ACTGCAATTGATACTGGTTG+TGG + chr5_3:16334178-16334197 Msa0802160:CDS 40.0%
! CTGCAATTGATACTGGTTGT+GGG + chr5_3:16334179-16334198 Msa0802160:CDS 40.0%
! TGCAATTGATACTGGTTGTG+GGG + chr5_3:16334180-16334199 Msa0802160:CDS 40.0%
ACGAACTAACACATAGACAC+CGG - chr5_3:16334277-16334296 None:intergenic 40.0%
TGTTAGTTCGTTGTTGCGTA+TGG + chr5_3:16334286-16334305 Msa0802160:intron 40.0%
! TTATGTTAGGTTGCTAGCTG+GGG + chr5_3:16334343-16334362 Msa0802160:intron 40.0%
TGAGCTTCATGGTTATCTCT+TGG - chr5_3:16334412-16334431 None:intergenic 40.0%
AAGAGATAACCATGAAGCTC+AGG + chr5_3:16334411-16334430 Msa0802160:CDS 40.0%
AGATGACACCAAGAATTGCT+GGG - chr5_3:16334462-16334481 None:intergenic 40.0%
TCAAAGGAGTTTGAAGGGAA+AGG - chr5_3:16334499-16334518 None:intergenic 40.0%
CCCTTCAAACTCCTTTGATA+TGG + chr5_3:16334501-16334520 Msa0802160:CDS 40.0%
GCCATATCAAAGGAGTTTGA+AGG - chr5_3:16334505-16334524 None:intergenic 40.0%
AGAGCAATGAGCCATATCAA+AGG - chr5_3:16334515-16334534 None:intergenic 40.0%
CAAATTCTGTCCATGGGATA+AGG - chr5_3:16334543-16334562 None:intergenic 40.0%
CTTATCCCATGGACAGAATT+TGG + chr5_3:16334541-16334560 Msa0802160:CDS 40.0%
! ATCATAGCAAGCGTTGTCTT+TGG - chr5_3:16334999-16335018 None:intergenic 40.0%
!! GTCATCACATTTTGGAGGAT+AGG - chr5_3:16335038-16335057 None:intergenic 40.0%
! AGACTGTCATCACATTTTGG+AGG - chr5_3:16335043-16335062 None:intergenic 40.0%
!!! CGCTTGTTTTGTTGTTCCAA+TGG + chr5_3:16335096-16335115 Msa0802160:CDS 40.0%
!! TTCAACCTTTGAGGCCATTT+CGG - chr5_3:16335154-16335173 None:intergenic 40.0%
AAGAAGTTGTTGCCTGATCT+TGG + chr5_3:16335268-16335287 Msa0802160:CDS 40.0%
! ATCTTGTTTGTGCCAAGATC+AGG - chr5_3:16335283-16335302 None:intergenic 40.0%
CCACAAAGGATCATTGATCA+AGG - chr5_3:16335353-16335372 None:intergenic 40.0%
CCTTGATCAATGATCCTTTG+TGG + chr5_3:16335350-16335369 Msa0802160:CDS 40.0%
TCAAACATACCAGTCATGGA+AGG - chr5_3:16335446-16335465 None:intergenic 40.0%
TGAAGAATCCATCAGCATGA+AGG - chr5_3:16335615-16335634 None:intergenic 40.0%
ATTGAGTGCATATTCACCTG+TGG - chr5_3:16335648-16335667 None:intergenic 40.0%
GCTTGTTTGAGCTTATCTAC+TGG + chr5_3:16335893-16335912 Msa0802160:intron 40.0%
!!! TGACTGTTTGAGAGTGCTTT+TGG + chr5_3:16335930-16335949 Msa0802160:intron 40.0%
CCGCAAAATAACTTGACTCT+CGG - chr5_3:16336268-16336287 None:intergenic 40.0%
!! CCGAGAGTCAAGTTATTTTG+CGG + chr5_3:16336265-16336284 Msa0802160:CDS 40.0%
TTGTCATCTTGATCCTGAGT+TGG - chr5_3:16336405-16336424 None:intergenic 40.0%
AAACTCATGAAACTGTGCAG+CGG + chr5_3:16336423-16336442 Msa0802160:three_prime_UTR 40.0%
! TCCCTTTGTTTCTCTACTTC+TGG - chr5_3:16336482-16336501 None:intergenic 40.0%
AACAAAAAGAGGGGACAGCA+AGG + chr5_3:16331616-16331635 Msa0802160:five_prime_UTR 45.0%
TGGGTGTGAGGCTAAACTAA+AGG - chr5_3:16331684-16331703 None:intergenic 45.0%
TGGAAAAAACAGGGGAATGG+TGG - chr5_3:16331764-16331783 None:intergenic 45.0%
GATGGAGGCTATGTCCTAAA+TGG + chr5_3:16332471-16332490 Msa0802160:intron 45.0%
CATGACATTGGGACCCATTT+AGG - chr5_3:16332488-16332507 None:intergenic 45.0%
TGGGAGCAAGTGAGAAAGTA+AGG - chr5_3:16332628-16332647 None:intergenic 45.0%
GTCTGTCACATTGATCTGGT+TGG + chr5_3:16332761-16332780 Msa0802160:intron 45.0%
CTGTCACATTGATCTGGTTG+GGG + chr5_3:16332763-16332782 Msa0802160:intron 45.0%
CAGCTCAGACCAATGTGAAA+AGG - chr5_3:16332895-16332914 None:intergenic 45.0%
GTCGAATTGCGATTAATCGC+GGG + chr5_3:16332967-16332986 Msa0802160:five_prime_UTR 45.0%
TGGTATGTTTGTGGAGGAAG+TGG + chr5_3:16333220-16333239 Msa0802160:intron 45.0%
! GTCAGAGATCGGTTCTTGTT+CGG - chr5_3:16333356-16333375 None:intergenic 45.0%
GATTCACCTAAGCAATCCTC+AGG + chr5_3:16333485-16333504 Msa0802160:CDS 45.0%
AAAGAGCCTGAGGATTGCTT+AGG - chr5_3:16333494-16333513 None:intergenic 45.0%
GCTGCATTCGGGAAAACTAA+AGG - chr5_3:16333528-16333547 None:intergenic 45.0%
TACTCCATGCACAGATCCAA+AGG + chr5_3:16333565-16333584 Msa0802160:CDS 45.0%
TCTCAAAAATCGGAGGGCAA+TGG - chr5_3:16333744-16333763 None:intergenic 45.0%
!! ATTGCCCTCCGATTTTTGAG+AGG + chr5_3:16333743-16333762 Msa0802160:CDS 45.0%
GTTACAAGCCTCCAATCAGA+TGG + chr5_3:16333794-16333813 Msa0802160:CDS 45.0%
CTACTCTTTGGCCATCTGAT+TGG - chr5_3:16333808-16333827 None:intergenic 45.0%
CTGATCCCAGGAATCAAAGA+TGG + chr5_3:16334145-16334164 Msa0802160:CDS 45.0%
CTGACCCATCTTTGATTCCT+GGG - chr5_3:16334153-16334172 None:intergenic 45.0%
ACTGACCCATCTTTGATTCC+TGG - chr5_3:16334154-16334173 None:intergenic 45.0%
CAAACTGAACCTGAGCTTCA+TGG - chr5_3:16334423-16334442 None:intergenic 45.0%
GAGATGACACCAAGAATTGC+TGG - chr5_3:16334463-16334482 None:intergenic 45.0%
ATTCACCGAATTCTTCGTCC+CGG + chr5_3:16334803-16334822 Msa0802160:CDS 45.0%
GACAAAACCCAAAATCCTCC+GGG - chr5_3:16334824-16334843 None:intergenic 45.0%
GGACAAAACCCAAAATCCTC+CGG - chr5_3:16334825-16334844 None:intergenic 45.0%
!!! GGAGGATTTTGGGTTTTGTC+CGG + chr5_3:16334824-16334843 Msa0802160:CDS 45.0%
CATCTACGCTCATAGTTGAC+TGG - chr5_3:16334854-16334873 None:intergenic 45.0%
CAGTCAACTATGAGCGTAGA+TGG + chr5_3:16334852-16334871 Msa0802160:CDS 45.0%
TTTGGAGGATAGGTGTCTCT+AGG - chr5_3:16335028-16335047 None:intergenic 45.0%
GTCTTGAACCAGATTCAGCA+TGG + chr5_3:16335059-16335078 Msa0802160:CDS 45.0%
ACAACAAAACAAGCGCGAAG+CGG - chr5_3:16335091-16335110 None:intergenic 45.0%
GGTGCAACATTCAACCTTTG+AGG - chr5_3:16335163-16335182 None:intergenic 45.0%
GGTTGAATGTTGCACCTGAA+AGG + chr5_3:16335167-16335186 Msa0802160:CDS 45.0%
!! GTTTTCGATCGAGGCCTTAT+CGG + chr5_3:16335418-16335437 Msa0802160:CDS 45.0%
!! AGTCATGGAAGGTACCGATA+AGG - chr5_3:16335435-16335454 None:intergenic 45.0%
TTATCGGTACCTTCCATGAC+TGG + chr5_3:16335434-16335453 Msa0802160:CDS 45.0%
TGAAGGAGGTCATAGGTTCT+AGG - chr5_3:16335598-16335617 None:intergenic 45.0%
ATCAGCATGAAGGAGGTCAT+AGG - chr5_3:16335605-16335624 None:intergenic 45.0%
TATGACCTCCTTCATGCTGA+TGG + chr5_3:16335604-16335623 Msa0802160:CDS 45.0%
AGAATCCATCAGCATGAAGG+AGG - chr5_3:16335612-16335631 None:intergenic 45.0%
GATAAGTCTAAGGGGCTGTT+TGG + chr5_3:16335866-16335885 Msa0802160:intron 45.0%
TTGTGAGATCGCTCTAACAG+TGG + chr5_3:16336162-16336181 Msa0802160:intron 45.0%
TGCCATTGCAACTATTGCGA+AGG + chr5_3:16336289-16336308 Msa0802160:CDS 45.0%
GCCATTGCAACTATTGCGAA+GGG + chr5_3:16336290-16336309 Msa0802160:CDS 45.0%
TGGTATGCCAGAAAAAGCTG+TGG + chr5_3:16336372-16336391 Msa0802160:CDS 45.0%
! CATCTTGATCCTGAGTTGGA+TGG - chr5_3:16336401-16336420 None:intergenic 45.0%
!!! TTTATTTTATCTTTTATAAT+AGG + chr5_3:16336034-16336053 Msa0802160:intron 5.0%
! GGGAGATTTGTTTGGGTGTG+AGG - chr5_3:16331696-16331715 None:intergenic 50.0%
CAAGAACCGATCTCTGACTG+CGG + chr5_3:16333358-16333377 Msa0802160:CDS 50.0%
ATTGGAGGCTTGTAACCAGG+TGG - chr5_3:16333790-16333809 None:intergenic 50.0%
CTGATTGGAGGCTTGTAACC+AGG - chr5_3:16333793-16333812 None:intergenic 50.0%
CTCTTTGGCCATCTGATTGG+AGG - chr5_3:16333805-16333824 None:intergenic 50.0%
GGAAACATAGTACCTCCACC+AGG - chr5_3:16334088-16334107 None:intergenic 50.0%
! GCTCTAGATGCCTTATCCCA+TGG + chr5_3:16334530-16334549 Msa0802160:CDS 50.0%
ATCCTCCGGGACGAAGAATT+CGG - chr5_3:16334811-16334830 None:intergenic 50.0%
! TTCTTCGTCCCGGAGGATTT+TGG + chr5_3:16334813-16334832 Msa0802160:CDS 50.0%
! TCTTCGTCCCGGAGGATTTT+GGG + chr5_3:16334814-16334833 Msa0802160:CDS 50.0%
! CTCATAGTTGACTGGTGGAC+CGG - chr5_3:16334846-16334865 None:intergenic 50.0%
CTACGCTCATAGTTGACTGG+TGG - chr5_3:16334851-16334870 None:intergenic 50.0%
AACTATGAGCGTAGATGGCG+CGG + chr5_3:16334857-16334876 Msa0802160:CDS 50.0%
GGAGTGTACCATGCTGAATC+TGG - chr5_3:16335070-16335089 None:intergenic 50.0%
ACATGCCGAAATGGCCTCAA+AGG + chr5_3:16335146-16335165 Msa0802160:CDS 50.0%
! CTCCCTGTAGTTTTCGATCG+AGG + chr5_3:16335409-16335428 Msa0802160:CDS 50.0%
GGCCTCGATCGAAAACTACA+GGG - chr5_3:16335414-16335433 None:intergenic 50.0%
AGGCCTCGATCGAAAACTAC+AGG - chr5_3:16335415-16335434 None:intergenic 50.0%
TCTTCACTGCTGAAAGCCAC+AGG + chr5_3:16335629-16335648 Msa0802160:CDS 50.0%
GCCCTTCGCAATAGTTGCAA+TGG - chr5_3:16336294-16336313 None:intergenic 50.0%
! CTATTGCGAAGGGCATGAGA+TGG + chr5_3:16336300-16336319 Msa0802160:CDS 50.0%
!! ATGGCTGCCACAGCTTTTTC+TGG - chr5_3:16336382-16336401 None:intergenic 50.0%
TGTGCAGCGGTAAGAAAGAG+CGG + chr5_3:16336436-16336455 Msa0802160:three_prime_UTR 50.0%
! ATCGGTTCTTGTTCGGCTGG+TGG - chr5_3:16333349-16333368 None:intergenic 55.0%
! GAGATCGGTTCTTGTTCGGC+TGG - chr5_3:16333352-16333371 None:intergenic 55.0%
TGATCGCCGCAGTCAGAGAT+CGG - chr5_3:16333367-16333386 None:intergenic 55.0%
TGCTTAGTTCCTCCTCCACC+TGG + chr5_3:16333772-16333791 Msa0802160:CDS 55.0%
! TGTTAGGTTGCTAGCTGGGG+CGG + chr5_3:16334346-16334365 Msa0802160:intron 55.0%
! GTTCAGTTTGCTCTCGAGCG+CGG + chr5_3:16334433-16334452 Msa0802160:CDS 55.0%
CGCGGTATCCCAGCAATTCT+TGG + chr5_3:16334451-16334470 Msa0802160:CDS 55.0%
ATGGCGCGGATGGAACACAA+CGG + chr5_3:16334871-16334890 Msa0802160:CDS 55.0%
GCCTCACGTACATGCCGAAA+TGG + chr5_3:16335137-16335156 Msa0802160:CDS 55.0%
GCCATTTCGGCATGTACGTG+AGG - chr5_3:16335141-16335160 None:intergenic 55.0%
! ATGGACCGGATTTTGCGACC+AGG + chr5_3:16336227-16336246 Msa0802160:CDS 55.0%
AGAGGGGACAGCAAGGCACA+TGG + chr5_3:16331623-16331642 Msa0802160:five_prime_UTR 60.0%
GGCTTGTAACCAGGTGGAGG+AGG - chr5_3:16333784-16333803 None:intergenic 60.0%
GGAGGCTTGTAACCAGGTGG+AGG - chr5_3:16333787-16333806 None:intergenic 60.0%
! TAGCTGGGGCGGTGACTTGT+TGG + chr5_3:16334357-16334376 Msa0802160:CDS 60.0%
!! GGCGGTGACTTGTTGGATCG+AGG + chr5_3:16334364-16334383 Msa0802160:CDS 60.0%
CACCGAATTCTTCGTCCCGG+AGG + chr5_3:16334806-16334825 Msa0802160:CDS 60.0%
ATGAGCGTAGATGGCGCGGA+TGG + chr5_3:16334861-16334880 Msa0802160:CDS 60.0%
! GACCGGATTTTGCGACCAGG+CGG + chr5_3:16336230-16336249 Msa0802160:CDS 60.0%
! ACCGGATTTTGCGACCAGGC+GGG + chr5_3:16336231-16336250 Msa0802160:CDS 60.0%
CTGTGGCAGCCATCCAACTC+AGG + chr5_3:16336389-16336408 Msa0802160:CDS 60.0%
GCGCGGATGGAACACAACGG+TGG + chr5_3:16334874-16334893 Msa0802160:CDS 65.0%
GCCCGCCTGGTCGCAAAATC+CGG - chr5_3:16336235-16336254 None:intergenic 65.0%
CGGATTATAGCGTGCCCGCC+TGG - chr5_3:16336248-16336267 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 16331530 16336872 16331530 ID=Msa0802160;Name=Msa0802160
chr5_3 mRNA 16331530 16336872 16331530 ID=Msa0802160-mRNA-1;Parent=Msa0802160;Name=Msa0802160-mRNA-1;_AED=0.16;_eAED=0.16;_QI=441|1|1|1|0.75|0.66|9|451|598
chr5_3 exon 16331530 16331823 16331530 ID=Msa0802160-mRNA-1:exon:6838;Parent=Msa0802160-mRNA-1
chr5_3 exon 16332870 16332988 16332870 ID=Msa0802160-mRNA-1:exon:6839;Parent=Msa0802160-mRNA-1
chr5_3 exon 16333292 16333586 16333292 ID=Msa0802160-mRNA-1:exon:6840;Parent=Msa0802160-mRNA-1
chr5_3 exon 16333697 16333845 16333697 ID=Msa0802160-mRNA-1:exon:6841;Parent=Msa0802160-mRNA-1
chr5_3 exon 16334006 16334201 16334006 ID=Msa0802160-mRNA-1:exon:6842;Parent=Msa0802160-mRNA-1
chr5_3 exon 16334352 16334562 16334352 ID=Msa0802160-mRNA-1:exon:6843;Parent=Msa0802160-mRNA-1
chr5_3 exon 16334783 16335455 16334783 ID=Msa0802160-mRNA-1:exon:6844;Parent=Msa0802160-mRNA-1
chr5_3 exon 16335573 16335650 16335573 ID=Msa0802160-mRNA-1:exon:6845;Parent=Msa0802160-mRNA-1
chr5_3 exon 16336199 16336872 16336199 ID=Msa0802160-mRNA-1:exon:6846;Parent=Msa0802160-mRNA-1
chr5_3 five_prime_UTR 16331530 16331823 16331530 ID=Msa0802160-mRNA-1:five_prime_utr;Parent=Msa0802160-mRNA-1
chr5_3 five_prime_UTR 16332870 16332988 16332870 ID=Msa0802160-mRNA-1:five_prime_utr;Parent=Msa0802160-mRNA-1
chr5_3 five_prime_UTR 16333292 16333319 16333292 ID=Msa0802160-mRNA-1:five_prime_utr;Parent=Msa0802160-mRNA-1
chr5_3 CDS 16333320 16333586 16333320 ID=Msa0802160-mRNA-1:cds;Parent=Msa0802160-mRNA-1
chr5_3 CDS 16333697 16333845 16333697 ID=Msa0802160-mRNA-1:cds;Parent=Msa0802160-mRNA-1
chr5_3 CDS 16334006 16334201 16334006 ID=Msa0802160-mRNA-1:cds;Parent=Msa0802160-mRNA-1
chr5_3 CDS 16334352 16334562 16334352 ID=Msa0802160-mRNA-1:cds;Parent=Msa0802160-mRNA-1
chr5_3 CDS 16334783 16335455 16334783 ID=Msa0802160-mRNA-1:cds;Parent=Msa0802160-mRNA-1
chr5_3 CDS 16335573 16335650 16335573 ID=Msa0802160-mRNA-1:cds;Parent=Msa0802160-mRNA-1
chr5_3 CDS 16336199 16336421 16336199 ID=Msa0802160-mRNA-1:cds;Parent=Msa0802160-mRNA-1
chr5_3 three_prime_UTR 16336422 16336872 16336422 ID=Msa0802160-mRNA-1:three_prime_utr;Parent=Msa0802160-mRNA-1
Gene Sequence

>Msa0802160

ATGAAGCATAAGGATGGAAAACTGATCCACCAGCCGAACAAGAACCGATCTCTGACTGCGGCGATCACTATCATTGTTCTGTGTGGTTTTTCATTCTACCTTGGTGGAGTCTTTAAATCTGGAAACAATGGTGTTGATGTCATCAACACCATTCAGAAATCACTTGATTCACCTAAGCAATCCTCAGGCTCTTTGCAAATTAAGCCCTTTAGTTTTCCCGAATGCAGCAATGATTATCAAGACTATACTCCATGCACAGATCCAAAGAGATGGAGAAAGTATGGTACCTATAGACTTACTTTGTTGGAACGCCATTGCCCTCCGATTTTTGAGAGGAAAGAATGCTTAGTTCCTCCTCCACCTGGTTACAAGCCTCCAATCAGATGGCCAAAGAGTAGAGATGAATGTTGGTACAGGAATGTGCCATATGATTGGATTAACAAACAGAAGTCTAATCAGCATTGGTTGATAAAGGAAGGAGAGAAATTTCAATTTCCTGGTGGAGGTACTATGTTTCCTAATGGTGTTGGTGAATATGTTGATTTAATGCAAGATCTGATCCCAGGAATCAAAGATGGGTCAGTTAGAACTGCAATTGATACTGGTTGTGGGGTTGCTAGCTGGGGCGGTGACTTGTTGGATCGAGGCGTTCTAACAATTTCTCTCGCGCCAAGAGATAACCATGAAGCTCAGGTTCAGTTTGCTCTCGAGCGCGGTATCCCAGCAATTCTTGGTGTCATCTCTACACAAAGACTTCCTTTCCCTTCAAACTCCTTTGATATGGCTCATTGCTCTAGATGCCTTATCCCATGGACAGAATTTGGTGGAATTTATCTCCAAGAAATTCACCGAATTCTTCGTCCCGGAGGATTTTGGGTTTTGTCCGGTCCACCAGTCAACTATGAGCGTAGATGGCGCGGATGGAACACAACGGTGGAAGAACAAAGATCAGATTATGAAAAGCTACAAGATTTGCTCACATCAATGTGCTTCAAATTATACAACAAAAAGGATGACATATATGTATGGCAAAAGGCCAAAGACAACGCTTGCTATGATAAGCTTCCTAGAGACACCTATCCTCCAAAATGTGATGACAGTCTTGAACCAGATTCAGCATGGTACACTCCGCTTCGCGCTTGTTTTGTTGTTCCAATGGAAAAGTACAAGAAATCAGGCCTCACGTACATGCCGAAATGGCCTCAAAGGTTGAATGTTGCACCTGAAAGGATTTCACTTGTTCAAGGTTCTAGTTCTAGTACTTTCAGTCATGATAACAGTAAGTGGAAAAAGCGCATTCAGCACTACAAGAAGTTGTTGCCTGATCTTGGCACAAACAAGATAAGAAATGTGATGGATATGAATACAGCTTATGGAGGTTTTGCTGCTTCCTTGATCAATGATCCTTTGTGGGTTATGAATGTTGTTTCATCTTATGGTCCTAATACACTCCCTGTAGTTTTCGATCGAGGCCTTATCGGTACCTTCCATGACTGGTGTGAAGCTTTTTCAACATATCCTAGAACCTATGACCTCCTTCATGCTGATGGATTCTTCACTGCTGAAAGCCACAGATGTGAAATGAAGTATGTAATGTTGGAAATGGACCGGATTTTGCGACCAGGCGGGCACGCTATAATCCGAGAGTCAAGTTATTTTGCGGATGCCATTGCAACTATTGCGAAGGGCATGAGATGGATATGTCATAAAGAAAACACTGAGTTTGATGTTGAAAAAGAGAAGATATTGGTATGCCAGAAAAAGCTGTGGCAGCCATCCAACTCAGGATCAAGATGA
Protein sequence

>Msa0802160

MKHKDGKLIHQPNKNRSLTAAITIIVLCGFSFYLGGVFKSGNNGVDVINTIQKSLDSPKQSSGSLQIKPFSFPECSNDYQDYTPCTDPKRWRKYGTYRLTLLERHCPPIFERKECLVPPPPGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLIKEGEKFQFPGGGTMFPNGVGEYVDLMQDLIPGIKDGSVRTAIDTGCGVASWGGDLLDRGVLTISLAPRDNHEAQVQFALERGIPAILGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLQEIHRILRPGGFWVLSGPPVNYERRWRGWNTTVEEQRSDYEKLQDLLTSMCFKLYNKKDDIYVWQKAKDNACYDKLPRDTYPPKCDDSLEPDSAWYTPLRACFVVPMEKYKKSGLTYMPKWPQRLNVAPERISLVQGSSSSTFSHDNSKWKKRIQHYKKLLPDLGTNKIRNVMDMNTAYGGFAASLINDPLWVMNVVSSYGPNTLPVVFDRGLIGTFHDWCEAFSTYPRTYDLLHADGFFTAESHRCEMKYVMLEMDRILRPGGHAIIRESSYFADAIATIAKGMRWICHKENTEFDVEKEKILVCQKKLWQPSNSGSR*