Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804750 | XP_003613090.1 | 95.413 | 545 | 7 | 3 | 1 | 539 | 1 | 533 | 0.0 | 1064 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804750 | sp|Q8VYN6|PFKA5_ARATH | 80.873 | 481 | 79 | 2 | 59 | 539 | 70 | 537 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804750 | G7JXR3 | 95.413 | 545 | 7 | 3 | 1 | 539 | 1 | 533 | 0.0 | 1064 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0804750 | Msa0847880 | 0.823448 | 1.377458e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804750 | MtrunA17_Chr5g0412481 | 95.413 | 545 | 7 | 3 | 1 | 539 | 1 | 533 | 0.0 | 1064 |
| Msa0804750 | MtrunA17_Chr8g0367681 | 78.172 | 536 | 89 | 5 | 20 | 539 | 6 | 529 | 0.0 | 857 |
| Msa0804750 | MtrunA17_Chr1g0196891 | 46.170 | 470 | 208 | 8 | 76 | 539 | 90 | 520 | 8.00e-132 | 394 |
| Msa0804750 | MtrunA17_Chr6g0487421 | 50.895 | 391 | 172 | 5 | 155 | 539 | 74 | 450 | 7.76e-131 | 390 |
| Msa0804750 | MtrunA17_Chr3g0140611 | 50.895 | 391 | 172 | 5 | 155 | 539 | 78 | 454 | 1.94e-130 | 390 |
| Msa0804750 | MtrunA17_Chr8g0389631 | 50.255 | 392 | 174 | 5 | 155 | 539 | 77 | 454 | 3.24e-129 | 385 |
| Msa0804750 | MtrunA17_Chr2g0330871 | 43.949 | 471 | 217 | 7 | 76 | 539 | 23 | 453 | 1.22e-126 | 378 |
| Msa0804750 | MtrunA17_Chr4g0076591 | 40.669 | 359 | 195 | 3 | 187 | 539 | 92 | 438 | 2.13e-91 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804750 | AT2G22480.1 | 80.873 | 481 | 79 | 2 | 59 | 539 | 70 | 537 | 0.0 | 819 |
| Msa0804750 | AT5G56630.1 | 51.414 | 389 | 171 | 4 | 155 | 539 | 77 | 451 | 9.75e-134 | 397 |
| Msa0804750 | AT4G26270.1 | 51.399 | 393 | 166 | 6 | 155 | 539 | 77 | 452 | 9.81e-132 | 392 |
| Msa0804750 | AT4G32840.1 | 51.289 | 388 | 172 | 5 | 155 | 539 | 78 | 451 | 8.44e-131 | 389 |
| Msa0804750 | AT4G29220.1 | 44.798 | 471 | 212 | 8 | 76 | 539 | 24 | 453 | 3.75e-130 | 388 |
| Msa0804750 | AT5G61580.1 | 43.487 | 499 | 230 | 10 | 52 | 539 | 47 | 504 | 2.84e-128 | 385 |
| Msa0804750 | AT5G61580.2 | 43.912 | 501 | 224 | 12 | 52 | 539 | 47 | 503 | 2.94e-127 | 382 |
| Msa0804750 | AT5G47810.1 | 43.256 | 430 | 208 | 7 | 118 | 538 | 36 | 438 | 1.54e-113 | 344 |
Find 141 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCTGCCTTTACTTCTTC+TGG | 0.234836 | 5_3:-20742722 | None:intergenic |
| GTTAGTCTGTCCATCATTAT+TGG | 0.243277 | 5_3:+20746674 | Msa0804750:three_prime_UTR |
| CCATGAAAGTCTCTAGTTAT+AGG | 0.260365 | 5_3:-20741225 | None:intergenic |
| TTCAAGAGGCTTGAAAATTT+AGG | 0.264057 | 5_3:+20746606 | Msa0804750:three_prime_UTR |
| CTCTCAGGTGGCAGCCTATT+AGG | 0.270534 | 5_3:+20743331 | Msa0804750:CDS |
| CGGATCAAAGTGTGTGTTAT+TGG | 0.270583 | 5_3:+20743807 | Msa0804750:CDS |
| ACTTACATACCTCGGGAATT+AGG | 0.276615 | 5_3:-20744135 | None:intergenic |
| AATCGGGATTGTGAAATTAA+TGG | 0.277060 | 5_3:+20744051 | Msa0804750:CDS |
| TAGTGAAATTGTGGATAGTT+TGG | 0.287015 | 5_3:+20743378 | Msa0804750:CDS |
| GCTTTGGTATTGCAGGTTCA+TGG | 0.290416 | 5_3:+20746397 | Msa0804750:intron |
| CTGATCCCTTTGATTCTATA+AGG | 0.291613 | 5_3:-20744280 | None:intergenic |
| CTATTGATGGACAAAACTTT+TGG | 0.291628 | 5_3:+20743858 | Msa0804750:CDS |
| GAAGGGTGGTGGCGAGGTTA+GGG | 0.292280 | 5_3:-20740399 | None:intergenic |
| GAGATTGTTGGTATTCCTTT+TGG | 0.298132 | 5_3:+20743123 | Msa0804750:CDS |
| GAAGAGACGATGGTTGGTTT+TGG | 0.310529 | 5_3:-20740467 | None:intergenic |
| ACTAATGATACCGATGCTTC+AGG | 0.313533 | 5_3:+20744489 | Msa0804750:CDS |
| TGAAGGGTGGTGGCGAGGTT+AGG | 0.325848 | 5_3:-20740400 | None:intergenic |
| CAGGTTCATGGTGCATTTGC+TGG | 0.329427 | 5_3:+20746409 | Msa0804750:intron |
| CGATGCCACATTCGACTGTT+TGG | 0.331058 | 5_3:-20746520 | None:intergenic |
| GCATTGATCCTGGATGTAAT+TGG | 0.334330 | 5_3:+20742368 | Msa0804750:CDS |
| TGCGATATTACTTCGGTGAT+TGG | 0.351808 | 5_3:-20746481 | None:intergenic |
| CAGATTATATCATAGGAATA+TGG | 0.355156 | 5_3:+20746635 | Msa0804750:three_prime_UTR |
| GTAATCACACTTGAAATATA+TGG | 0.362471 | 5_3:+20743093 | Msa0804750:CDS |
| CTCTTTGTGTTGGGTGGAAA+TGG | 0.365286 | 5_3:+20743564 | Msa0804750:CDS |
| GCTTCCACAGATTATATCAT+AGG | 0.366456 | 5_3:+20746628 | Msa0804750:three_prime_UTR |
| CTTTCATGGGAATTATGATT+CGG | 0.368327 | 5_3:+20741239 | Msa0804750:CDS |
| AGACAATGATATTCTATTGA+TGG | 0.383675 | 5_3:+20743845 | Msa0804750:CDS |
| AATGCTAAACTTGGAGATAT+CGG | 0.387969 | 5_3:+20744513 | Msa0804750:CDS |
| AAAACAAAATTGATTACAAT+TGG | 0.389726 | 5_3:+20740542 | Msa0804750:CDS |
| TTGATCCAACATACATGATT+CGG | 0.395697 | 5_3:+20744988 | Msa0804750:CDS |
| AGTAATATCGCATCCTCAAT+TGG | 0.405969 | 5_3:+20746492 | Msa0804750:CDS |
| TTGTATTATTCCAATAATGA+TGG | 0.406776 | 5_3:-20746684 | None:intergenic |
| CTCCGCGTGAAACTCCTAAT+AGG | 0.411712 | 5_3:-20743345 | None:intergenic |
| TTTCATGGGAATTATGATTC+GGG | 0.417190 | 5_3:+20741240 | Msa0804750:CDS |
| ATCAACATGCTCTTTGTGTT+GGG | 0.422869 | 5_3:+20743555 | Msa0804750:CDS |
| AATAATAGCAAACCTCTTGT+TGG | 0.426233 | 5_3:-20744545 | None:intergenic |
| ATGCTAAACTTGGAGATATC+GGG | 0.438212 | 5_3:+20744514 | Msa0804750:CDS |
| ATCGGGATTGTGAAATTAAT+GGG | 0.439443 | 5_3:+20744052 | Msa0804750:CDS |
| CTAATGATACCGATGCTTCA+GGG | 0.449759 | 5_3:+20744490 | Msa0804750:CDS |
| TCAAATGAAGTCGGGTTGAC+CGG | 0.450420 | 5_3:-20746557 | None:intergenic |
| CCTATAACTAGAGACTTTCA+TGG | 0.455161 | 5_3:+20741225 | Msa0804750:CDS |
| TGTTAGAGACTTTGAATGAA+TGG | 0.455225 | 5_3:-20740489 | None:intergenic |
| TGATCCAACATACATGATTC+GGG | 0.455405 | 5_3:+20744989 | Msa0804750:CDS |
| CATAGTGCATATCACGGAAT+CGG | 0.458640 | 5_3:+20744034 | Msa0804750:CDS |
| CTGTTTGGATCCACCAATTG+AGG | 0.462985 | 5_3:-20746505 | None:intergenic |
| GAACGCATAGAAGAAGCATC+AGG | 0.466750 | 5_3:-20740628 | None:intergenic |
| TATTGGAATAATACAAATGA+TGG | 0.466753 | 5_3:+20746691 | Msa0804750:three_prime_UTR |
| TCATACATAAATACAGCAAT+GGG | 0.467329 | 5_3:-20745095 | None:intergenic |
| ATCATAGGAATATGGATTCA+AGG | 0.471959 | 5_3:+20746643 | Msa0804750:three_prime_UTR |
| ACTTGTGGAGGACTGTGTCC+TGG | 0.474252 | 5_3:+20742749 | Msa0804750:CDS |
| GAAAATAATCAAATGAAGTC+GGG | 0.476259 | 5_3:-20746565 | None:intergenic |
| AAGGTTCCTTTCAATTTACA+TGG | 0.477045 | 5_3:+20744227 | Msa0804750:intron |
| AATAAATTCTGCATATATAG+AGG | 0.477305 | 5_3:+20743914 | Msa0804750:CDS |
| GGAGTTTCACGCGGAGGACC+TGG | 0.478048 | 5_3:+20743352 | Msa0804750:CDS |
| TTCAATTTACATGGACCTCA+TGG | 0.479511 | 5_3:+20744236 | Msa0804750:CDS |
| CAAGTACCTTATAGAATCAA+AGG | 0.480379 | 5_3:+20744274 | Msa0804750:CDS |
| GGTGCATTTGCTGGATATAG+TGG | 0.480453 | 5_3:+20746418 | Msa0804750:CDS |
| GATCAACATGCTCTTTGTGT+TGG | 0.483619 | 5_3:+20743554 | Msa0804750:CDS |
| GTTTGTGTGGCAGAGGGAGC+AGG | 0.484756 | 5_3:+20744308 | Msa0804750:CDS |
| AATTGGTTATTTGTATAGCA+AGG | 0.486471 | 5_3:+20746734 | Msa0804750:three_prime_UTR |
| TGTGGCAGAGGGAGCAGGAC+AGG | 0.492036 | 5_3:+20744313 | Msa0804750:CDS |
| GTTGATTGATTGCAGGAAAG+AGG | 0.494138 | 5_3:+20743531 | Msa0804750:intron |
| GTTCAAAACATTCATCTCTC+AGG | 0.497136 | 5_3:+20743316 | Msa0804750:CDS |
| CAAAGAGTTGATGGAAATAC+CGG | 0.500018 | 5_3:+20743164 | Msa0804750:CDS |
| TCTTAACGATGTCATTAGAC+AGG | 0.502961 | 5_3:+20742772 | Msa0804750:CDS |
| CTTCAAACCAGAAGAAGTAA+AGG | 0.503634 | 5_3:+20742715 | Msa0804750:CDS |
| ATAGTGCATATCACGGAATC+GGG | 0.505089 | 5_3:+20744035 | Msa0804750:CDS |
| AGAAAATAATCAAATGAAGT+CGG | 0.506105 | 5_3:-20746566 | None:intergenic |
| TAATGACAGAGTGCTTCTTA+AGG | 0.510674 | 5_3:+20741290 | Msa0804750:CDS |
| CATTGATCCTGGATGTAATT+GGG | 0.511287 | 5_3:+20742369 | Msa0804750:CDS |
| ATCATACATAAATACAGCAA+TGG | 0.511412 | 5_3:-20745096 | None:intergenic |
| ATCAATCTGTCCACTAGCTA+AGG | 0.518760 | 5_3:-20744107 | None:intergenic |
| AGCTGTAGTTTGTGTGGCAG+AGG | 0.521624 | 5_3:+20744301 | Msa0804750:CDS |
| TTGATTCTATAAGGTACTTG+AGG | 0.522219 | 5_3:-20744271 | None:intergenic |
| GCTTCAGGGAATGCTAAACT+TGG | 0.524252 | 5_3:+20744504 | Msa0804750:CDS |
| ATTATGATTCGGGTGAGGAA+TGG | 0.529337 | 5_3:+20741250 | Msa0804750:CDS |
| ACCTGGAGTTAGTGAAATTG+TGG | 0.529574 | 5_3:+20743369 | Msa0804750:CDS |
| TTGATTGATTGCAGGAAAGA+GGG | 0.531805 | 5_3:+20743532 | Msa0804750:intron |
| AAATTAATGGGCCGTAGCAG+TGG | 0.542200 | 5_3:+20744064 | Msa0804750:CDS |
| CATTCATCACCTACATCTGC+AGG | 0.545558 | 5_3:+20742337 | Msa0804750:CDS |
| GAAAAGCCGCGATAGCCAAA+AGG | 0.545849 | 5_3:-20743138 | None:intergenic |
| TATGGTGTAACCGAGATTGT+TGG | 0.548160 | 5_3:+20743111 | Msa0804750:CDS |
| AAGGCAGCCATTGTTACTTG+TGG | 0.549028 | 5_3:+20742734 | Msa0804750:CDS |
| AAGGGTGGTGGCGAGGTTAG+GGG | 0.549303 | 5_3:-20740398 | None:intergenic |
| AACATGCTCTTTGTGTTGGG+TGG | 0.552403 | 5_3:+20743558 | Msa0804750:CDS |
| GGTGGAAATGGTACACATGC+TGG | 0.556073 | 5_3:+20743576 | Msa0804750:CDS |
| CACGCCCGAATCATGTATGT+TGG | 0.556320 | 5_3:-20744993 | None:intergenic |
| GATTTCATTTACAGCTGTCA+AGG | 0.558373 | 5_3:+20743287 | Msa0804750:intron |
| TGTTCCACCCAATTACATCC+AGG | 0.559378 | 5_3:-20742376 | None:intergenic |
| TGAGGTCCATGTAAATTGAA+AGG | 0.559778 | 5_3:-20744233 | None:intergenic |
| GGATATAGTGGCATTACAGT+AGG | 0.561938 | 5_3:+20746430 | Msa0804750:CDS |
| TGAAATTGTGGATAGTTTGG+AGG | 0.562109 | 5_3:+20743381 | Msa0804750:CDS |
| CTTCATCATCATCATGTGCA+TGG | 0.564878 | 5_3:+20740418 | Msa0804750:CDS |
| AAGTACCTTATAGAATCAAA+GGG | 0.565661 | 5_3:+20744275 | Msa0804750:CDS |
| GCAGCCATTGTTACTTGTGG+AGG | 0.566120 | 5_3:+20742737 | Msa0804750:CDS |
| GATTCGGGTGAGGAATGGAA+TGG | 0.568905 | 5_3:+20741255 | Msa0804750:CDS |
| TTTAGCATTCCCTGAAGCAT+CGG | 0.571949 | 5_3:-20744499 | None:intergenic |
| TCCACAATTTCACTAACTCC+AGG | 0.574739 | 5_3:-20743370 | None:intergenic |
| TTTGAACTAATATATTCAAG+AGG | 0.575286 | 5_3:+20746592 | Msa0804750:three_prime_UTR |
| CGGGGTTTATATCCAACAAG+AGG | 0.576795 | 5_3:+20744533 | Msa0804750:CDS |
| ATGCAATCATCCTTAGCTAG+TGG | 0.577715 | 5_3:+20744097 | Msa0804750:CDS |
| TACTGTTCTTGGACAAAATG+CGG | 0.577922 | 5_3:+20745046 | Msa0804750:CDS |
| TTGCTATGAATCCACTGCTA+CGG | 0.580298 | 5_3:-20744075 | None:intergenic |
| TGTCGAGCAAATGCATCAGA+TGG | 0.581648 | 5_3:+20745014 | Msa0804750:CDS |
| AAAAGGAATACCAACAATCT+CGG | 0.582578 | 5_3:-20743121 | None:intergenic |
| CTGCAGATGTAGGTGATGAA+TGG | 0.587215 | 5_3:-20742336 | None:intergenic |
| CATCGATGCTTAACTTCGAC+CGG | 0.587899 | 5_3:+20746538 | Msa0804750:CDS |
| GGGAAAATATCAGTAACATG+AGG | 0.589366 | 5_3:-20740607 | None:intergenic |
| AGCAATGGGCAAAGATAGAG+AGG | 0.592032 | 5_3:-20745081 | None:intergenic |
| TATTCCTATGATATAATCTG+TGG | 0.592093 | 5_3:-20746632 | None:intergenic |
| TGGGAATTATGATTCGGGTG+AGG | 0.594329 | 5_3:+20741245 | Msa0804750:CDS |
| GGAAAATATCAGTAACATGA+GGG | 0.596785 | 5_3:-20740606 | None:intergenic |
| TTGAGGATGCGATATTACTT+CGG | 0.597150 | 5_3:-20746488 | None:intergenic |
| CATGCACATGATGATGATGA+AGG | 0.601136 | 5_3:-20740417 | None:intergenic |
| GGGTTCATCGAGCTGGACCT+CGG | 0.602038 | 5_3:+20742681 | Msa0804750:intron |
| GCTGTAGTTTGTGTGGCAGA+GGG | 0.603354 | 5_3:+20744302 | Msa0804750:CDS |
| TGAATGGAAGAGACGATGGT+TGG | 0.610640 | 5_3:-20740473 | None:intergenic |
| CTAATGACATCGTTAAGACC+AGG | 0.614698 | 5_3:-20742767 | None:intergenic |
| TGCTAAACTTGGAGATATCG+GGG | 0.616169 | 5_3:+20744515 | Msa0804750:CDS |
| CACTGAGCGCCTGCAGATGT+AGG | 0.618839 | 5_3:-20742346 | None:intergenic |
| TCTTTGTGCTTCTTCAACCG+CGG | 0.622748 | 5_3:-20743889 | None:intergenic |
| GGGATCAGCTGTAGTTTGTG+TGG | 0.624112 | 5_3:+20744295 | Msa0804750:CDS |
| CAGTCCTCCACAAGTAACAA+TGG | 0.624369 | 5_3:-20742741 | None:intergenic |
| GATGTAATTGGGTGGAACAA+TGG | 0.628814 | 5_3:+20742380 | Msa0804750:CDS |
| CTATAACTAGAGACTTTCAT+GGG | 0.628864 | 5_3:+20741226 | Msa0804750:CDS |
| CAAAACATTCATCTCTCAGG+TGG | 0.633928 | 5_3:+20743319 | Msa0804750:CDS |
| AATATCGCATCCTCAATTGG+TGG | 0.636705 | 5_3:+20746495 | Msa0804750:CDS |
| TGGATCCAAACAGTCGAATG+TGG | 0.644484 | 5_3:+20746515 | Msa0804750:CDS |
| GATGATGAAGGGTGGTGGCG+AGG | 0.644742 | 5_3:-20740405 | None:intergenic |
| AACGCATAGAAGAAGCATCA+GGG | 0.646346 | 5_3:-20740627 | None:intergenic |
| ATGATGATGATGAAGGGTGG+TGG | 0.647952 | 5_3:-20740410 | None:intergenic |
| TAGGCGCATAGTGCATATCA+CGG | 0.649368 | 5_3:+20744028 | Msa0804750:intron |
| TGATGTATGCCTAATTCCCG+AGG | 0.666643 | 5_3:+20744126 | Msa0804750:CDS |
| ATGCACATGATGATGATGAA+GGG | 0.671280 | 5_3:-20740416 | None:intergenic |
| TGATCCTGGATGTAATTGGG+TGG | 0.675248 | 5_3:+20742372 | Msa0804750:CDS |
| AGGTGACTCAAAACTCCATG+AGG | 0.677996 | 5_3:-20744251 | None:intergenic |
| TGAATGAATGGAAGAGACGA+TGG | 0.679469 | 5_3:-20740477 | None:intergenic |
| CTATTAGGAGTTTCACGCGG+AGG | 0.683751 | 5_3:+20743346 | Msa0804750:CDS |
| TGCAAATGCAATTCACGACG+AGG | 0.685123 | 5_3:+20743599 | Msa0804750:CDS |
| CACATGATGATGATGAAGGG+TGG | 0.713897 | 5_3:-20740413 | None:intergenic |
| AGCCTATTAGGAGTTTCACG+CGG | 0.736304 | 5_3:+20743343 | Msa0804750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTTTAGGTAAATA+GGG | - | chr5_3:20741018-20741037 | None:intergenic | 10.0% |
| !!! | AAACTAAAGTATATTTTTTT+AGG | - | chr5_3:20741027-20741046 | None:intergenic | 10.0% |
| !! | TACATATAAAATAAAAATCA+CGG | - | chr5_3:20743507-20743526 | None:intergenic | 10.0% |
| !! | TTCAATAATATTTACATATA+TGG | - | chr5_3:20745503-20745522 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5_3:20746005-20746024 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5_3:20746006-20746025 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5_3:20746005-20746024 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5_3:20746006-20746025 | None:intergenic | 10.0% |
| !! | AAAACAAAATTGATTACAAT+TGG | + | chr5_3:20740542-20740561 | Msa0804750:CDS | 15.0% |
| !!! | TTTATGTTTTAATCTAGTTA+GGG | + | chr5_3:20740969-20740988 | Msa0804750:intron | 15.0% |
| !!! | GTATATTTTTTTAGGTAAAT+AGG | - | chr5_3:20741019-20741038 | None:intergenic | 15.0% |
| !!! | TTTAGTTTAAAAAAATAGCA+CGG | + | chr5_3:20741039-20741058 | Msa0804750:intron | 15.0% |
| !!! | ATCTATTCATTGTTATTAAA+TGG | - | chr5_3:20741529-20741548 | None:intergenic | 15.0% |
| !!! | AATATATTTGAGGTAATTAA+GGG | - | chr5_3:20742991-20743010 | None:intergenic | 15.0% |
| !! | AATCAATTTCATTAATAGAA+TGG | - | chr5_3:20743419-20743438 | None:intergenic | 15.0% |
| !! | AATGCAATTAACTAATATAA+GGG | - | chr5_3:20743640-20743659 | None:intergenic | 15.0% |
| !! | AAATGCAATTAACTAATATA+AGG | - | chr5_3:20743641-20743660 | None:intergenic | 15.0% |
| !! | ATTAAATAGAAAACAATACT+GGG | - | chr5_3:20743972-20743991 | None:intergenic | 15.0% |
| !! | TATTAAATAGAAAACAATAC+TGG | - | chr5_3:20743973-20743992 | None:intergenic | 15.0% |
| !! | TAGAATTAACATAAAAACAA+GGG | + | chr5_3:20744676-20744695 | Msa0804750:intron | 15.0% |
| !!! | TATGATTTCACTTTTATTAT+TGG | + | chr5_3:20745113-20745132 | Msa0804750:intron | 15.0% |
| !! | AATTAGAGTTATATTGTATT+GGG | - | chr5_3:20745940-20745959 | None:intergenic | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | - | chr5_3:20745941-20745960 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5_3:20746004-20746023 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5_3:20746004-20746023 | None:intergenic | 15.0% |
| !!! | TAAGTTTAAAGAAGATTTTG+AGG | + | chr5_3:20740570-20740589 | Msa0804750:CDS | 20.0% |
| !!! | TTTGTAATTCTTTTCATAGT+TGG | + | chr5_3:20740673-20740692 | Msa0804750:intron | 20.0% |
| !! | CTAACTAGATTAAAACATAA+AGG | - | chr5_3:20740970-20740989 | None:intergenic | 20.0% |
| !!! | CTTTATGTTTTAATCTAGTT+AGG | + | chr5_3:20740968-20740987 | Msa0804750:intron | 20.0% |
| !!! | TATTCATTGTTATTAAATGG+CGG | - | chr5_3:20741526-20741545 | None:intergenic | 20.0% |
| !!! | TAGATATTGGATATTGTTTT+AGG | + | chr5_3:20741582-20741601 | Msa0804750:intron | 20.0% |
| !! | TAAAACATTTGTTCATACTT+TGG | + | chr5_3:20742101-20742120 | Msa0804750:intron | 20.0% |
| !!! | AACTATTGTTCATAATTTTC+CGG | - | chr5_3:20742527-20742546 | None:intergenic | 20.0% |
| !!! | AAAGATTCTGAAATTTTTGT+AGG | + | chr5_3:20742660-20742679 | Msa0804750:intron | 20.0% |
| !!! | AAGATTCTGAAATTTTTGTA+GGG | + | chr5_3:20742661-20742680 | Msa0804750:intron | 20.0% |
| !!! | TAAGTTTTTTGAGTAGTTTA+TGG | + | chr5_3:20742947-20742966 | Msa0804750:intron | 20.0% |
| !!! | AAGTTTTTTGAGTAGTTTAT+GGG | + | chr5_3:20742948-20742967 | Msa0804750:intron | 20.0% |
| !!! | GAATATATTTGAGGTAATTA+AGG | - | chr5_3:20742992-20743011 | None:intergenic | 20.0% |
| !! | TTGTAATCTATGATTTCTTA+AGG | + | chr5_3:20743673-20743692 | Msa0804750:intron | 20.0% |
| !!! | ATATCATTGTCTATAGTTTT+CGG | - | chr5_3:20743837-20743856 | None:intergenic | 20.0% |
| !! | AATAAATTCTGCATATATAG+AGG | + | chr5_3:20743914-20743933 | Msa0804750:CDS | 20.0% |
| !!! | TTTTTCGGAAAAAAAAATTC+AGG | - | chr5_3:20744393-20744412 | None:intergenic | 20.0% |
| !!! | CTGATGAATGATATATTTTT+CGG | - | chr5_3:20744408-20744427 | None:intergenic | 20.0% |
| !! | CTAGAATTAACATAAAAACA+AGG | + | chr5_3:20744675-20744694 | Msa0804750:intron | 20.0% |
| !! | AAATAATATATAGCTAGAAG+TGG | - | chr5_3:20745386-20745405 | None:intergenic | 20.0% |
| !!! | CATTTTTCATCCTTATAATT+GGG | - | chr5_3:20745418-20745437 | None:intergenic | 20.0% |
| !!! | ACATTTTTCATCCTTATAAT+TGG | - | chr5_3:20745419-20745438 | None:intergenic | 20.0% |
| !! | ATTATAAGGATGAAAAATGT+AGG | + | chr5_3:20745419-20745438 | Msa0804750:intron | 20.0% |
| !! | TGAATATTTACAATAAACTG+TGG | + | chr5_3:20745533-20745552 | Msa0804750:intron | 20.0% |
| !! | AGTTTATGCTTTATAAGATT+AGG | + | chr5_3:20745669-20745688 | Msa0804750:intron | 20.0% |
| !!! | TTGTGTTTATTTATTTTGTG+TGG | + | chr5_3:20745723-20745742 | Msa0804750:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5_3:20745871-20745890 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr5_3:20745981-20746000 | None:intergenic | 20.0% |
| !! | AGAAAATAATCAAATGAAGT+CGG | - | chr5_3:20746569-20746588 | None:intergenic | 20.0% |
| !! | TTTGAACTAATATATTCAAG+AGG | + | chr5_3:20746592-20746611 | Msa0804750:three_prime_UTR | 20.0% |
| !! | TTGTATTATTCCAATAATGA+TGG | - | chr5_3:20746687-20746706 | None:intergenic | 20.0% |
| !! | TATTGGAATAATACAAATGA+TGG | + | chr5_3:20746691-20746710 | Msa0804750:three_prime_UTR | 20.0% |
| !!! | AATAACCAATTTTTCGTATA+AGG | - | chr5_3:20746725-20746744 | None:intergenic | 20.0% |
| ! | ACATCTTAAACAATTTGACA+TGG | - | chr5_3:20740770-20740789 | None:intergenic | 25.0% |
| ! | CTAAAGAAATGTTCCAAATA+CGG | - | chr5_3:20740865-20740884 | None:intergenic | 25.0% |
| !! | TTAAGGTAGTTTGCATTATT+TGG | + | chr5_3:20741307-20741326 | Msa0804750:intron | 25.0% |
| ! | ATTCCTTCACAAATTTCATA+TGG | + | chr5_3:20741452-20741471 | Msa0804750:intron | 25.0% |
| ! | ACAATGAATAGATTATGAAG+AGG | + | chr5_3:20741536-20741555 | Msa0804750:intron | 25.0% |
| !!! | ATATTGGATATTGTTTTAGG+TGG | + | chr5_3:20741585-20741604 | Msa0804750:intron | 25.0% |
| ! | AATCATATTAGTCCTCTTTA+TGG | + | chr5_3:20741699-20741718 | Msa0804750:intron | 25.0% |
| ! | AACACAAAGTTTATAGTTGA+CGG | - | chr5_3:20741742-20741761 | None:intergenic | 25.0% |
| ! | AACTATAAACTTTGTGTTTG+AGG | + | chr5_3:20741744-20741763 | Msa0804750:intron | 25.0% |
| ! | TACAAAATGTTGTCATATAG+CGG | + | chr5_3:20741998-20742017 | Msa0804750:intron | 25.0% |
| ! | AATTCGATTACAATTACGAA+AGG | - | chr5_3:20742200-20742219 | None:intergenic | 25.0% |
| ! | TTAAATACCAGATTGACATT+AGG | - | chr5_3:20742422-20742441 | None:intergenic | 25.0% |
| ! | GTAACACTAACTTAAAAGAA+AGG | - | chr5_3:20742556-20742575 | None:intergenic | 25.0% |
| !! | TTGAAGTATATATTTTTCCG+AGG | - | chr5_3:20742701-20742720 | None:intergenic | 25.0% |
| ! | GTAATCACACTTGAAATATA+TGG | + | chr5_3:20743093-20743112 | Msa0804750:CDS | 25.0% |
| !!! | GAATCAATTGTTGTTTAGAA+GGG | - | chr5_3:20743203-20743222 | None:intergenic | 25.0% |
| ! | AGACAAATATTACTTCTGTA+TGG | - | chr5_3:20743445-20743464 | None:intergenic | 25.0% |
| !! | TCTTAAGGAAATCATCTTTT+TGG | + | chr5_3:20743688-20743707 | Msa0804750:intron | 25.0% |
| ! | AGACAATGATATTCTATTGA+TGG | + | chr5_3:20743845-20743864 | Msa0804750:CDS | 25.0% |
| !!! | AACTTTTAACTTACATACCT+CGG | - | chr5_3:20744146-20744165 | None:intergenic | 25.0% |
| ! | TCGAATAGATAAATTGATAC+AGG | + | chr5_3:20744188-20744207 | Msa0804750:intron | 25.0% |
| ! | AAGTACCTTATAGAATCAAA+GGG | + | chr5_3:20744275-20744294 | Msa0804750:CDS | 25.0% |
| ! | GTGCTTACAATAATGTAAAT+GGG | + | chr5_3:20744576-20744595 | Msa0804750:intron | 25.0% |
| ! | GTTTGATACTTCATCTATAT+AGG | - | chr5_3:20744642-20744661 | None:intergenic | 25.0% |
| ! | ATTAACATAAAAACAAGGGA+TGG | + | chr5_3:20744680-20744699 | Msa0804750:intron | 25.0% |
| !!! | GATGGTGATTTTAATATTCT+TGG | + | chr5_3:20744698-20744717 | Msa0804750:intron | 25.0% |
| !! | CTTTTAACAGAAGTAAAACT+AGG | - | chr5_3:20744825-20744844 | None:intergenic | 25.0% |
| ! | TCAGACGAAAAATTATTTCA+AGG | + | chr5_3:20744935-20744954 | Msa0804750:intron | 25.0% |
| ! | TCATACATAAATACAGCAAT+GGG | - | chr5_3:20745098-20745117 | None:intergenic | 25.0% |
| ! | ATCATACATAAATACAGCAA+TGG | - | chr5_3:20745099-20745118 | None:intergenic | 25.0% |
| !! | TAGATGCTATTTAACAACTT+TGG | - | chr5_3:20745206-20745225 | None:intergenic | 25.0% |
| ! | TTATACTTCACCCAATTATA+AGG | + | chr5_3:20745405-20745424 | Msa0804750:intron | 25.0% |
| ! | TTACAATAAACTGTGGTAAA+TGG | + | chr5_3:20745540-20745559 | Msa0804750:intron | 25.0% |
| ! | TTATGCTTTATAAGATTAGG+AGG | + | chr5_3:20745672-20745691 | Msa0804750:intron | 25.0% |
| ! | TATGCTTTATAAGATTAGGA+GGG | + | chr5_3:20745673-20745692 | Msa0804750:intron | 25.0% |
| ! | ATATCTAGTTGTTGGAAATT+CGG | + | chr5_3:20745811-20745830 | Msa0804750:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5_3:20745872-20745891 | None:intergenic | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | chr5_3:20745893-20745912 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | chr5_3:20745894-20745913 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5_3:20745982-20746001 | None:intergenic | 25.0% |
| ! | ATTTGTGTAAAAAACCAAAC+TGG | + | chr5_3:20746116-20746135 | Msa0804750:intron | 25.0% |
| ! | CAACTTGTGTTTAAATACTA+CGG | - | chr5_3:20746183-20746202 | None:intergenic | 25.0% |
| !!! | TGTTATTCGATATTGATTCT+CGG | + | chr5_3:20746375-20746394 | Msa0804750:intron | 25.0% |
| ! | GAAAATAATCAAATGAAGTC+GGG | - | chr5_3:20746568-20746587 | None:intergenic | 25.0% |
| ! | TATTCCTATGATATAATCTG+TGG | - | chr5_3:20746635-20746654 | None:intergenic | 25.0% |
| ! | CAGATTATATCATAGGAATA+TGG | + | chr5_3:20746635-20746654 | Msa0804750:three_prime_UTR | 25.0% |
| !!! | ATATGGATTCAAGGTATTTT+TGG | + | chr5_3:20746652-20746671 | Msa0804750:three_prime_UTR | 25.0% |
| ! | TTCTTCCTTATACGAAAAAT+TGG | + | chr5_3:20746717-20746736 | Msa0804750:three_prime_UTR | 25.0% |
| ! | AATTGGTTATTTGTATAGCA+AGG | + | chr5_3:20746734-20746753 | Msa0804750:three_prime_UTR | 25.0% |
| TGTTAGAGACTTTGAATGAA+TGG | - | chr5_3:20740492-20740511 | None:intergenic | 30.0% | |
| !!! | TTAAAGAAGATTTTGAGGCA+CGG | + | chr5_3:20740575-20740594 | Msa0804750:CDS | 30.0% |
| GGAAAATATCAGTAACATGA+GGG | - | chr5_3:20740609-20740628 | None:intergenic | 30.0% | |
| !!! | CTACTTTTTGTCTCAAAATG+AGG | + | chr5_3:20740650-20740669 | Msa0804750:CDS | 30.0% |
| ! | CGTATTTGGAACATTTCTTT+AGG | + | chr5_3:20740863-20740882 | Msa0804750:intron | 30.0% |
| !! | GATTGTGATTTGTTGATGTT+TGG | + | chr5_3:20741140-20741159 | Msa0804750:intron | 30.0% |
| CTATAACTAGAGACTTTCAT+GGG | + | chr5_3:20741226-20741245 | Msa0804750:CDS | 30.0% | |
| CTTTCATGGGAATTATGATT+CGG | + | chr5_3:20741239-20741258 | Msa0804750:CDS | 30.0% | |
| TTTCATGGGAATTATGATTC+GGG | + | chr5_3:20741240-20741259 | Msa0804750:CDS | 30.0% | |
| GCTGTTGTTAATGTAGATAT+TGG | + | chr5_3:20741569-20741588 | Msa0804750:intron | 30.0% | |
| ATAAACTTTGTGTTTGAGGA+TGG | + | chr5_3:20741748-20741767 | Msa0804750:intron | 30.0% | |
| CGATTATTTATTACCCGAAA+CGG | - | chr5_3:20741809-20741828 | None:intergenic | 30.0% | |
| ! | TTTTTCACTTATCCTTGCAT+TGG | + | chr5_3:20742170-20742189 | Msa0804750:intron | 30.0% |
| ! | TGATTTTCCTAATGTCAATC+TGG | + | chr5_3:20742412-20742431 | Msa0804750:intron | 30.0% |
| !! | ATTGCAAGCAACTTGTTTTT+CGG | + | chr5_3:20742464-20742483 | Msa0804750:intron | 30.0% |
| ATTTAGAGATGAACATTCTC+CGG | + | chr5_3:20742505-20742524 | Msa0804750:intron | 30.0% | |
| !! | CGATCAAATTGTTTCTGATA+TGG | + | chr5_3:20742803-20742822 | Msa0804750:intron | 30.0% |
| ! | CAATCTCTTTCGAAAGTTTT+TGG | + | chr5_3:20742879-20742898 | Msa0804750:intron | 30.0% |
| GACGTTAACGAATATATTTG+AGG | - | chr5_3:20743001-20743020 | None:intergenic | 30.0% | |
| ! | TAACGTCATGTACGTTTTAT+TGG | + | chr5_3:20743014-20743033 | Msa0804750:intron | 30.0% |
| AAAAGGAATACCAACAATCT+CGG | - | chr5_3:20743124-20743143 | None:intergenic | 30.0% | |
| !! | CGAATCAATTGTTGTTTAGA+AGG | - | chr5_3:20743204-20743223 | None:intergenic | 30.0% |
| TAGTGAAATTGTGGATAGTT+TGG | + | chr5_3:20743378-20743397 | Msa0804750:CDS | 30.0% | |
| ! | GTATATTGTTGATTGATTGC+AGG | + | chr5_3:20743524-20743543 | Msa0804750:intron | 30.0% |
| !! | CTATTGATGGACAAAACTTT+TGG | + | chr5_3:20743858-20743877 | Msa0804750:CDS | 30.0% |
| ! | AATCTTTTACCCGTCTTAAT+AGG | + | chr5_3:20744009-20744028 | Msa0804750:intron | 30.0% |
| AATCGGGATTGTGAAATTAA+TGG | + | chr5_3:20744051-20744070 | Msa0804750:CDS | 30.0% | |
| ATCGGGATTGTGAAATTAAT+GGG | + | chr5_3:20744052-20744071 | Msa0804750:CDS | 30.0% | |
| !!! | ACTTTTAACTTACATACCTC+GGG | - | chr5_3:20744145-20744164 | None:intergenic | 30.0% |
| AAGGTTCCTTTCAATTTACA+TGG | + | chr5_3:20744227-20744246 | Msa0804750:intron | 30.0% | |
| ! | TTGATTCTATAAGGTACTTG+AGG | - | chr5_3:20744274-20744293 | None:intergenic | 30.0% |
| CAAGTACCTTATAGAATCAA+AGG | + | chr5_3:20744274-20744293 | Msa0804750:CDS | 30.0% | |
| ! | TTTGAAGTAAATTCTGCATC+AGG | - | chr5_3:20744467-20744486 | None:intergenic | 30.0% |
| AATGCTAAACTTGGAGATAT+CGG | + | chr5_3:20744513-20744532 | Msa0804750:CDS | 30.0% | |
| AATAATAGCAAACCTCTTGT+TGG | - | chr5_3:20744548-20744567 | None:intergenic | 30.0% | |
| !! | GGTTTGCTATTATTTGCTTA+TGG | + | chr5_3:20744554-20744573 | Msa0804750:intron | 30.0% |
| GGTGCTTACAATAATGTAAA+TGG | + | chr5_3:20744575-20744594 | Msa0804750:intron | 30.0% | |
| TAATTCTAGACATCTTACAG+TGG | - | chr5_3:20744664-20744683 | None:intergenic | 30.0% | |
| TTGATCCAACATACATGATT+CGG | + | chr5_3:20744988-20745007 | Msa0804750:CDS | 30.0% | |
| ! | GGAATTTTATGTACTGTTCT+TGG | + | chr5_3:20745035-20745054 | Msa0804750:CDS | 30.0% |
| ! | ATTGGTTCTCAATTCTCATA+TGG | + | chr5_3:20745131-20745150 | Msa0804750:intron | 30.0% |
| ! | TGCTATTTAACAACTTTGGT+CGG | - | chr5_3:20745202-20745221 | None:intergenic | 30.0% |
| TTGTACTAAATAGCGTAACA+TGG | - | chr5_3:20745263-20745282 | None:intergenic | 30.0% | |
| !! | AATACAACAGTTCTAAAACG+CGG | - | chr5_3:20745301-20745320 | None:intergenic | 30.0% |
| ! | GATATACTGTTTTCAGAGAA+AGG | + | chr5_3:20745471-20745490 | Msa0804750:intron | 30.0% |
| AGACATAGCATGATTTACAA+GGG | - | chr5_3:20745595-20745614 | None:intergenic | 30.0% | |
| TAGACATAGCATGATTTACA+AGG | - | chr5_3:20745596-20745615 | None:intergenic | 30.0% | |
| TCTAAAGGAGCAATCTTATA+CGG | - | chr5_3:20745645-20745664 | None:intergenic | 30.0% | |
| ! | AAGCATAAACTAGTCTCTAA+AGG | - | chr5_3:20745660-20745679 | None:intergenic | 30.0% |
| !! | AGAAAAAGCATTAAAGACAG+TGG | - | chr5_3:20745700-20745719 | None:intergenic | 30.0% |
| GAATTTCCAACAACTAGATA+TGG | - | chr5_3:20745812-20745831 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5_3:20745997-20746016 | None:intergenic | 30.0% | |
| TTCAAGAGGCTTGAAAATTT+AGG | + | chr5_3:20746606-20746625 | Msa0804750:three_prime_UTR | 30.0% | |
| ATCATAGGAATATGGATTCA+AGG | + | chr5_3:20746643-20746662 | Msa0804750:three_prime_UTR | 30.0% | |
| ! | ATGCACATGATGATGATGAA+GGG | - | chr5_3:20740419-20740438 | None:intergenic | 35.0% |
| GGGAAAATATCAGTAACATG+AGG | - | chr5_3:20740610-20740629 | None:intergenic | 35.0% | |
| !!! | GTTTGCTTTTTTCTCTCACT+TGG | + | chr5_3:20740914-20740933 | Msa0804750:intron | 35.0% |
| !! | TCTAGTTAGGGTGTTTTAGA+TGG | + | chr5_3:20740981-20741000 | Msa0804750:intron | 35.0% |
| !!! | TCTTGTTTTTGTGTGATGAC+AGG | + | chr5_3:20741199-20741218 | Msa0804750:intron | 35.0% |
| !!! | CTTGTTTTTGTGTGATGACA+GGG | + | chr5_3:20741200-20741219 | Msa0804750:intron | 35.0% |
| CCATGAAAGTCTCTAGTTAT+AGG | - | chr5_3:20741228-20741247 | None:intergenic | 35.0% | |
| CCTATAACTAGAGACTTTCA+TGG | + | chr5_3:20741225-20741244 | Msa0804750:CDS | 35.0% | |
| ! | TAATGACAGAGTGCTTCTTA+AGG | + | chr5_3:20741290-20741309 | Msa0804750:CDS | 35.0% |
| TTGATTCAATGTTGTCGATG+CGG | + | chr5_3:20741359-20741378 | Msa0804750:intron | 35.0% | |
| TCCATATAAATACGCCATTG+CGG | + | chr5_3:20741406-20741425 | Msa0804750:intron | 35.0% | |
| CCTTCACAAATTTCATATGG+CGG | + | chr5_3:20741455-20741474 | Msa0804750:intron | 35.0% | |
| ! | TTGTTATTAAATGGCGGTCA+TGG | - | chr5_3:20741520-20741539 | None:intergenic | 35.0% |
| ! | AAGTTTATAGTTGACGGACA+TGG | - | chr5_3:20741736-20741755 | None:intergenic | 35.0% |
| ! | CTGGTTCATTGGTTGAAAAT+TGG | + | chr5_3:20741862-20741881 | Msa0804750:intron | 35.0% |
| ACTATATCGCTATAACGTAG+CGG | + | chr5_3:20741933-20741952 | Msa0804750:intron | 35.0% | |
| GACATTATAGCACTATTGTG+AGG | + | chr5_3:20742026-20742045 | Msa0804750:intron | 35.0% | |
| !! | TCACAGATAGTGGAAAATAG+CGG | - | chr5_3:20742067-20742086 | None:intergenic | 35.0% |
| ATGTAGTCAATCACAGATAG+TGG | - | chr5_3:20742077-20742096 | None:intergenic | 35.0% | |
| ATCGAATTGAAGTGAAATGC+TGG | + | chr5_3:20742212-20742231 | Msa0804750:intron | 35.0% | |
| CATTGATCCTGGATGTAATT+GGG | + | chr5_3:20742369-20742388 | Msa0804750:CDS | 35.0% | |
| !! | AAGCAACTTGTTTTTCGGAA+AGG | + | chr5_3:20742469-20742488 | Msa0804750:intron | 35.0% |
| !! | AGCAACTTGTTTTTCGGAAA+GGG | + | chr5_3:20742470-20742489 | Msa0804750:intron | 35.0% |
| CTTCAAACCAGAAGAAGTAA+AGG | + | chr5_3:20742715-20742734 | Msa0804750:CDS | 35.0% | |
| TCTTAACGATGTCATTAGAC+AGG | + | chr5_3:20742772-20742791 | Msa0804750:CDS | 35.0% | |
| GTTTAACAGCTGAAACAAAC+AGG | - | chr5_3:20742860-20742879 | None:intergenic | 35.0% | |
| ! | GAGATTGTTGGTATTCCTTT+TGG | + | chr5_3:20743123-20743142 | Msa0804750:CDS | 35.0% |
| ! | CTTTTCTGACAAAGAGTTGA+TGG | + | chr5_3:20743155-20743174 | Msa0804750:CDS | 35.0% |
| !! | CAAAGAGTTGATGGAAATAC+CGG | + | chr5_3:20743164-20743183 | Msa0804750:CDS | 35.0% |
| GAAGGGAAATATGAGATTAC+CGG | - | chr5_3:20743186-20743205 | None:intergenic | 35.0% | |
| GATTTCATTTACAGCTGTCA+AGG | + | chr5_3:20743287-20743306 | Msa0804750:intron | 35.0% | |
| GTTCAAAACATTCATCTCTC+AGG | + | chr5_3:20743316-20743335 | Msa0804750:CDS | 35.0% | |
| TGAAATTGTGGATAGTTTGG+AGG | + | chr5_3:20743381-20743400 | Msa0804750:CDS | 35.0% | |
| TTGATTGATTGCAGGAAAGA+GGG | + | chr5_3:20743532-20743551 | Msa0804750:intron | 35.0% | |
| ATCAACATGCTCTTTGTGTT+GGG | + | chr5_3:20743555-20743574 | Msa0804750:CDS | 35.0% | |
| ! | GTTTTCAGTGCTGTAAAAGA+CGG | + | chr5_3:20743787-20743806 | Msa0804750:intron | 35.0% |
| TGAGGTCCATGTAAATTGAA+AGG | - | chr5_3:20744236-20744255 | None:intergenic | 35.0% | |
| TTCAATTTACATGGACCTCA+TGG | + | chr5_3:20744236-20744255 | Msa0804750:CDS | 35.0% | |
| CTGATCCCTTTGATTCTATA+AGG | - | chr5_3:20744283-20744302 | None:intergenic | 35.0% | |
| ATGCTAAACTTGGAGATATC+GGG | + | chr5_3:20744514-20744533 | Msa0804750:CDS | 35.0% | |
| TGATCCAACATACATGATTC+GGG | + | chr5_3:20744989-20745008 | Msa0804750:CDS | 35.0% | |
| TACTGTTCTTGGACAAAATG+CGG | + | chr5_3:20745046-20745065 | Msa0804750:CDS | 35.0% | |
| !! | AAAGAGTTGATGTGAACACA+AGG | - | chr5_3:20745168-20745187 | None:intergenic | 35.0% |
| GGGAATTGTATTCTCATTCA+AGG | - | chr5_3:20745752-20745771 | None:intergenic | 35.0% | |
| ACTAGATATGGACACATAAG+TGG | - | chr5_3:20745800-20745819 | None:intergenic | 35.0% | |
| ATGTGTCCATATCTAGTTGT+TGG | + | chr5_3:20745803-20745822 | Msa0804750:intron | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | - | chr5_3:20745858-20745877 | None:intergenic | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr5_3:20746026-20746045 | Msa0804750:intron | 35.0% | |
| ! | TACAACAAACATTTTGCAGC+CGG | + | chr5_3:20746235-20746254 | Msa0804750:intron | 35.0% |
| GAACACGTGAAATATGATCA+TGG | - | chr5_3:20746286-20746305 | None:intergenic | 35.0% | |
| ! | AACAGTAACCTTGATTCGAA+AGG | - | chr5_3:20746334-20746353 | None:intergenic | 35.0% |
| TTGAGGATGCGATATTACTT+CGG | - | chr5_3:20746491-20746510 | None:intergenic | 35.0% | |
| AGTAATATCGCATCCTCAAT+TGG | + | chr5_3:20746492-20746511 | Msa0804750:CDS | 35.0% | |
| GCTTCCACAGATTATATCAT+AGG | + | chr5_3:20746628-20746647 | Msa0804750:three_prime_UTR | 35.0% | |
| ! | GTTAGTCTGTCCATCATTAT+TGG | + | chr5_3:20746674-20746693 | Msa0804750:three_prime_UTR | 35.0% |
| ! | CATGCACATGATGATGATGA+AGG | - | chr5_3:20740420-20740439 | None:intergenic | 40.0% |
| CTTCATCATCATCATGTGCA+TGG | + | chr5_3:20740418-20740437 | Msa0804750:CDS | 40.0% | |
| !!! | GATGGTTGGTTTTGGAGTAA+CGG | - | chr5_3:20740462-20740481 | None:intergenic | 40.0% |
| TGAATGAATGGAAGAGACGA+TGG | - | chr5_3:20740480-20740499 | None:intergenic | 40.0% | |
| !! | AACGCATAGAAGAAGCATCA+GGG | - | chr5_3:20740630-20740649 | None:intergenic | 40.0% |
| !!! | CTTTTTTCTCTCACTTGGTC+AGG | + | chr5_3:20740919-20740938 | Msa0804750:intron | 40.0% |
| ! | ATTATGATTCGGGTGAGGAA+TGG | + | chr5_3:20741250-20741269 | Msa0804750:CDS | 40.0% |
| AATGTTGTCGATGCGGAATA+TGG | + | chr5_3:20741366-20741385 | Msa0804750:intron | 40.0% | |
| CCGCCATATGAAATTTGTGA+AGG | - | chr5_3:20741458-20741477 | None:intergenic | 40.0% | |
| CTCACATTGTTGCCTTAAGT+TGG | + | chr5_3:20741829-20741848 | Msa0804750:intron | 40.0% | |
| AGACAGCAGATTCCAACTTA+AGG | - | chr5_3:20741844-20741863 | None:intergenic | 40.0% | |
| !! | TTAAGTTGGAATCTGCTGTC+TGG | + | chr5_3:20741843-20741862 | Msa0804750:intron | 40.0% |
| TTGTACAAACTAGCGTATCG+CGG | - | chr5_3:20741983-20742002 | None:intergenic | 40.0% | |
| !! | CACAGATAGTGGAAAATAGC+GGG | - | chr5_3:20742066-20742085 | None:intergenic | 40.0% |
| TTGAAGTGAAATGCTGGACT+TGG | + | chr5_3:20742218-20742237 | Msa0804750:intron | 40.0% | |
| TGCTGGACTTGGATATTAAC+TGG | + | chr5_3:20742229-20742248 | Msa0804750:intron | 40.0% | |
| ! | GCATTGATCCTGGATGTAAT+TGG | + | chr5_3:20742368-20742387 | Msa0804750:CDS | 40.0% |
| GATGTAATTGGGTGGAACAA+TGG | + | chr5_3:20742380-20742399 | Msa0804750:CDS | 40.0% | |
| ! | ATGACTAGCGTAAAGCGTTA+TGG | + | chr5_3:20742635-20742654 | Msa0804750:intron | 40.0% |
| CTAATGACATCGTTAAGACC+AGG | - | chr5_3:20742770-20742789 | None:intergenic | 40.0% | |
| TATGGTGTAACCGAGATTGT+TGG | + | chr5_3:20743111-20743130 | Msa0804750:CDS | 40.0% | |
| CAAAACATTCATCTCTCAGG+TGG | + | chr5_3:20743319-20743338 | Msa0804750:CDS | 40.0% | |
| ACCTGGAGTTAGTGAAATTG+TGG | + | chr5_3:20743369-20743388 | Msa0804750:CDS | 40.0% | |
| TCCACAATTTCACTAACTCC+AGG | - | chr5_3:20743373-20743392 | None:intergenic | 40.0% | |
| GTTGATTGATTGCAGGAAAG+AGG | + | chr5_3:20743531-20743550 | Msa0804750:intron | 40.0% | |
| GATCAACATGCTCTTTGTGT+TGG | + | chr5_3:20743554-20743573 | Msa0804750:CDS | 40.0% | |
| CGGATCAAAGTGTGTGTTAT+TGG | + | chr5_3:20743807-20743826 | Msa0804750:CDS | 40.0% | |
| CATAGTGCATATCACGGAAT+CGG | + | chr5_3:20744034-20744053 | Msa0804750:CDS | 40.0% | |
| ATAGTGCATATCACGGAATC+GGG | + | chr5_3:20744035-20744054 | Msa0804750:CDS | 40.0% | |
| TTGCTATGAATCCACTGCTA+CGG | - | chr5_3:20744078-20744097 | None:intergenic | 40.0% | |
| ATGCAATCATCCTTAGCTAG+TGG | + | chr5_3:20744097-20744116 | Msa0804750:CDS | 40.0% | |
| ATCAATCTGTCCACTAGCTA+AGG | - | chr5_3:20744110-20744129 | None:intergenic | 40.0% | |
| ACTTACATACCTCGGGAATT+AGG | - | chr5_3:20744138-20744157 | None:intergenic | 40.0% | |
| TCGACAAAAGACAGAAAGCT+AGG | - | chr5_3:20744172-20744191 | None:intergenic | 40.0% | |
| ATTGATACAGGTCCTATCTG+TGG | + | chr5_3:20744200-20744219 | Msa0804750:intron | 40.0% | |
| ACTAATGATACCGATGCTTC+AGG | + | chr5_3:20744489-20744508 | Msa0804750:CDS | 40.0% | |
| CTAATGATACCGATGCTTCA+GGG | + | chr5_3:20744490-20744509 | Msa0804750:CDS | 40.0% | |
| TTTAGCATTCCCTGAAGCAT+CGG | - | chr5_3:20744502-20744521 | None:intergenic | 40.0% | |
| TGCTAAACTTGGAGATATCG+GGG | + | chr5_3:20744515-20744534 | Msa0804750:CDS | 40.0% | |
| AGTAGCAGTGTTGTCAATTG+TGG | - | chr5_3:20745361-20745380 | None:intergenic | 40.0% | |
| AACTGTGGTAAATGGAACAC+TGG | + | chr5_3:20745548-20745567 | Msa0804750:intron | 40.0% | |
| ATGGAACACTGGAGTACAAT+AGG | + | chr5_3:20745559-20745578 | Msa0804750:intron | 40.0% | |
| TGGAACACTGGAGTACAATA+GGG | + | chr5_3:20745560-20745579 | Msa0804750:intron | 40.0% | |
| AAAGGAGCAATCTTATACGG+AGG | - | chr5_3:20745642-20745661 | None:intergenic | 40.0% | |
| ! | CCATTTGCATTTTGTGCTTG+GGG | - | chr5_3:20745772-20745791 | None:intergenic | 40.0% |
| ! | GCCATTTGCATTTTGTGCTT+GGG | - | chr5_3:20745773-20745792 | None:intergenic | 40.0% |
| !! | TGCCATTTGCATTTTGTGCT+TGG | - | chr5_3:20745774-20745793 | None:intergenic | 40.0% |
| GAAAATGGGTCAGATATTCC+GGG | - | chr5_3:20745857-20745876 | None:intergenic | 40.0% | |
| ! | CCAAACTGGCTCAGATAAAA+CGG | + | chr5_3:20746040-20746059 | Msa0804750:intron | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | + | chr5_3:20746041-20746060 | Msa0804750:intron | 40.0% |
| ! | CCAAACTGGCTCAGATAAAA+CGG | + | chr5_3:20746040-20746059 | Msa0804750:intron | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | + | chr5_3:20746041-20746060 | Msa0804750:intron | 40.0% |
| ATCAACTATGCTTACGTCTC+CGG | - | chr5_3:20746257-20746276 | None:intergenic | 40.0% | |
| CTCTGTTTCCTTTCGAATCA+AGG | + | chr5_3:20746323-20746342 | Msa0804750:intron | 40.0% | |
| !! | TCGATATTGATTCTCGGCTT+TGG | + | chr5_3:20746381-20746400 | Msa0804750:intron | 40.0% |
| GGATATAGTGGCATTACAGT+AGG | + | chr5_3:20746430-20746449 | Msa0804750:CDS | 40.0% | |
| TGCGATATTACTTCGGTGAT+TGG | - | chr5_3:20746484-20746503 | None:intergenic | 40.0% | |
| AATATCGCATCCTCAATTGG+TGG | + | chr5_3:20746495-20746514 | Msa0804750:CDS | 40.0% | |
| ! | ATGATGATGATGAAGGGTGG+TGG | - | chr5_3:20740413-20740432 | None:intergenic | 45.0% |
| ! | CACATGATGATGATGAAGGG+TGG | - | chr5_3:20740416-20740435 | None:intergenic | 45.0% |
| !!! | GAAGAGACGATGGTTGGTTT+TGG | - | chr5_3:20740470-20740489 | None:intergenic | 45.0% |
| TGAATGGAAGAGACGATGGT+TGG | - | chr5_3:20740476-20740495 | None:intergenic | 45.0% | |
| ! | GTGTCTTTTCAGAGCTGAAG+AGG | + | chr5_3:20740518-20740537 | Msa0804750:CDS | 45.0% |
| !! | GAACGCATAGAAGAAGCATC+AGG | - | chr5_3:20740631-20740650 | None:intergenic | 45.0% |
| ACACACGCAATTTGATTCCG+TGG | + | chr5_3:20740823-20740842 | Msa0804750:intron | 45.0% | |
| CAATTTGATTCCGTGGTGTG+TGG | + | chr5_3:20740830-20740849 | Msa0804750:intron | 45.0% | |
| GTGGTTGTTTGCTCCGTATT+TGG | + | chr5_3:20740849-20740868 | Msa0804750:intron | 45.0% | |
| ! | TGGGAATTATGATTCGGGTG+AGG | + | chr5_3:20741245-20741264 | Msa0804750:CDS | 45.0% |
| GCCGCAATGGCGTATTTATA+TGG | - | chr5_3:20741410-20741429 | None:intergenic | 45.0% | |
| !!! | AGAATGGCATGGCGGTTTTT+TGG | - | chr5_3:20741485-20741504 | None:intergenic | 45.0% |
| GCGCAAAGCTTTCCATAAAG+AGG | - | chr5_3:20741714-20741733 | None:intergenic | 45.0% | |
| ! | GAATCTGCTGTCTGGTTCAT+TGG | + | chr5_3:20741851-20741870 | Msa0804750:intron | 45.0% |
| ! | CGCTATAACGTAGCGGAATT+TGG | + | chr5_3:20741940-20741959 | Msa0804750:intron | 45.0% |
| !! | ACGAAAGGCATTCCAATGCA+AGG | - | chr5_3:20742185-20742204 | None:intergenic | 45.0% |
| CTGCAGATGTAGGTGATGAA+TGG | - | chr5_3:20742339-20742358 | None:intergenic | 45.0% | |
| CATTCATCACCTACATCTGC+AGG | + | chr5_3:20742337-20742356 | Msa0804750:CDS | 45.0% | |
| TGATCCTGGATGTAATTGGG+TGG | + | chr5_3:20742372-20742391 | Msa0804750:CDS | 45.0% | |
| TGTTCCACCCAATTACATCC+AGG | - | chr5_3:20742379-20742398 | None:intergenic | 45.0% | |
| ! | TTTTGTAGGGTTCATCGAGC+TGG | + | chr5_3:20742674-20742693 | Msa0804750:intron | 45.0% |
| ATGGCTGCCTTTACTTCTTC+TGG | - | chr5_3:20742725-20742744 | None:intergenic | 45.0% | |
| ! | AAGGCAGCCATTGTTACTTG+TGG | + | chr5_3:20742734-20742753 | Msa0804750:CDS | 45.0% |
| CAGTCCTCCACAAGTAACAA+TGG | - | chr5_3:20742744-20742763 | None:intergenic | 45.0% | |
| !! | GGTATTCCTTTTGGCTATCG+CGG | + | chr5_3:20743132-20743151 | Msa0804750:CDS | 45.0% |
| AGCCTATTAGGAGTTTCACG+CGG | + | chr5_3:20743343-20743362 | Msa0804750:CDS | 45.0% | |
| AACATGCTCTTTGTGTTGGG+TGG | + | chr5_3:20743558-20743577 | Msa0804750:CDS | 45.0% | |
| CTCTTTGTGTTGGGTGGAAA+TGG | + | chr5_3:20743564-20743583 | Msa0804750:CDS | 45.0% | |
| TGCAAATGCAATTCACGACG+AGG | + | chr5_3:20743599-20743618 | Msa0804750:CDS | 45.0% | |
| !!! | AACTTTTGGCTTTGACACCG+CGG | + | chr5_3:20743872-20743891 | Msa0804750:CDS | 45.0% |
| TCTTTGTGCTTCTTCAACCG+CGG | - | chr5_3:20743892-20743911 | None:intergenic | 45.0% | |
| CACTATGCGCCTATTAAGAC+GGG | - | chr5_3:20744021-20744040 | None:intergenic | 45.0% | |
| GCACTATGCGCCTATTAAGA+CGG | - | chr5_3:20744022-20744041 | None:intergenic | 45.0% | |
| TAGGCGCATAGTGCATATCA+CGG | + | chr5_3:20744028-20744047 | Msa0804750:intron | 45.0% | |
| ! | AAATTAATGGGCCGTAGCAG+TGG | + | chr5_3:20744064-20744083 | Msa0804750:CDS | 45.0% |
| TGATGTATGCCTAATTCCCG+AGG | + | chr5_3:20744126-20744145 | Msa0804750:CDS | 45.0% | |
| AGGTCCTATCTGTGGTTCAA+AGG | + | chr5_3:20744208-20744227 | Msa0804750:intron | 45.0% | |
| GGAACCTTTGAACCACAGAT+AGG | - | chr5_3:20744215-20744234 | None:intergenic | 45.0% | |
| AGGTGACTCAAAACTCCATG+AGG | - | chr5_3:20744254-20744273 | None:intergenic | 45.0% | |
| GCTTCAGGGAATGCTAAACT+TGG | + | chr5_3:20744504-20744523 | Msa0804750:CDS | 45.0% | |
| CGGGGTTTATATCCAACAAG+AGG | + | chr5_3:20744533-20744552 | Msa0804750:CDS | 45.0% | |
| TGTCGAGCAAATGCATCAGA+TGG | + | chr5_3:20745014-20745033 | Msa0804750:CDS | 45.0% | |
| AGCAATGGGCAAAGATAGAG+AGG | - | chr5_3:20745084-20745103 | None:intergenic | 45.0% | |
| TCAATTGTGGATCGCGGAAT+AGG | - | chr5_3:20745348-20745367 | None:intergenic | 45.0% | |
| GTGTTGTCAATTGTGGATCG+CGG | - | chr5_3:20745354-20745373 | None:intergenic | 45.0% | |
| CCCCAAGCACAAAATGCAAA+TGG | + | chr5_3:20745769-20745788 | Msa0804750:intron | 45.0% | |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | - | chr5_3:20746043-20746062 | None:intergenic | 45.0% |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | - | chr5_3:20746043-20746062 | None:intergenic | 45.0% |
| ! | ATTCTCGGCTTTGGTATTGC+AGG | + | chr5_3:20746390-20746409 | Msa0804750:intron | 45.0% |
| GCTTTGGTATTGCAGGTTCA+TGG | + | chr5_3:20746397-20746416 | Msa0804750:intron | 45.0% | |
| ! | GGTGCATTTGCTGGATATAG+TGG | + | chr5_3:20746418-20746437 | Msa0804750:CDS | 45.0% |
| CTGTTTGGATCCACCAATTG+AGG | - | chr5_3:20746508-20746527 | None:intergenic | 45.0% | |
| TGGATCCAAACAGTCGAATG+TGG | + | chr5_3:20746515-20746534 | Msa0804750:CDS | 45.0% | |
| CATCGATGCTTAACTTCGAC+CGG | + | chr5_3:20746538-20746557 | Msa0804750:CDS | 45.0% | |
| !! | TCAAATGAAGTCGGGTTGAC+CGG | - | chr5_3:20746560-20746579 | None:intergenic | 45.0% |
| GAGCAAACAACCACACACCA+CGG | - | chr5_3:20740843-20740862 | None:intergenic | 50.0% | |
| GATTCGGGTGAGGAATGGAA+TGG | + | chr5_3:20741255-20741274 | Msa0804750:CDS | 50.0% | |
| GTTGTCGATGCGGAATATGG+TGG | + | chr5_3:20741369-20741388 | Msa0804750:intron | 50.0% | |
| ! | TCGATGCGGAATATGGTGGA+AGG | + | chr5_3:20741373-20741392 | Msa0804750:intron | 50.0% |
| AAATACGCCATTGCGGCATG+CGG | + | chr5_3:20741413-20741432 | Msa0804750:intron | 50.0% | |
| TTGTGAAGGAATTCCCGCCA+TGG | - | chr5_3:20741444-20741463 | None:intergenic | 50.0% | |
| !! | TGCCTCGCGAAGTGTTTTAG+TGG | + | chr5_3:20741773-20741792 | Msa0804750:intron | 50.0% |
| !!! | CTCGCGAAGTGTTTTAGTGG+CGG | + | chr5_3:20741776-20741795 | Msa0804750:intron | 50.0% |
| GCGTATCGCGGAAAGAATAG+TGG | - | chr5_3:20741971-20741990 | None:intergenic | 50.0% | |
| ! | GCAGCCATTGTTACTTGTGG+AGG | + | chr5_3:20742737-20742756 | Msa0804750:CDS | 50.0% |
| GAAAAGCCGCGATAGCCAAA+AGG | - | chr5_3:20743141-20743160 | None:intergenic | 50.0% | |
| CTCCGCGTGAAACTCCTAAT+AGG | - | chr5_3:20743348-20743367 | None:intergenic | 50.0% | |
| CTATTAGGAGTTTCACGCGG+AGG | + | chr5_3:20743346-20743365 | Msa0804750:CDS | 50.0% | |
| GGTGGAAATGGTACACATGC+TGG | + | chr5_3:20743576-20743595 | Msa0804750:CDS | 50.0% | |
| ! | GGGATCAGCTGTAGTTTGTG+TGG | + | chr5_3:20744295-20744314 | Msa0804750:CDS | 50.0% |
| ! | AGCTGTAGTTTGTGTGGCAG+AGG | + | chr5_3:20744301-20744320 | Msa0804750:CDS | 50.0% |
| ! | GCTGTAGTTTGTGTGGCAGA+GGG | + | chr5_3:20744302-20744321 | Msa0804750:CDS | 50.0% |
| CACGCCCGAATCATGTATGT+TGG | - | chr5_3:20744996-20745015 | None:intergenic | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr5_3:20745853-20745872 | None:intergenic | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | + | chr5_3:20746045-20746064 | Msa0804750:intron | 50.0% | |
| CTCAGATAAAACGGGACGGA+GGG | + | chr5_3:20746049-20746068 | Msa0804750:intron | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | + | chr5_3:20746045-20746064 | Msa0804750:intron | 50.0% | |
| CTCAGATAAAACGGGACGGA+GGG | + | chr5_3:20746049-20746068 | Msa0804750:intron | 50.0% | |
| CAGGTTCATGGTGCATTTGC+TGG | + | chr5_3:20746409-20746428 | Msa0804750:intron | 50.0% | |
| CGATGCCACATTCGACTGTT+TGG | - | chr5_3:20746523-20746542 | None:intergenic | 50.0% | |
| TGAAGGAATTCCCGCCATGG+TGG | - | chr5_3:20741441-20741460 | None:intergenic | 55.0% | |
| ATGGTACCGCCATGGCAGAA+TGG | - | chr5_3:20741501-20741520 | None:intergenic | 55.0% | |
| CGCCACTAAAACACTTCGCG+AGG | - | chr5_3:20741778-20741797 | None:intergenic | 55.0% | |
| GTGGCGGTTCATAGCCGTTT+CGG | + | chr5_3:20741792-20741811 | Msa0804750:intron | 55.0% | |
| TGGCGGTTCATAGCCGTTTC+GGG | + | chr5_3:20741793-20741812 | Msa0804750:intron | 55.0% | |
| ACTTGTGGAGGACTGTGTCC+TGG | + | chr5_3:20742749-20742768 | Msa0804750:CDS | 55.0% | |
| CTCTCAGGTGGCAGCCTATT+AGG | + | chr5_3:20743331-20743350 | Msa0804750:CDS | 55.0% | |
| GTCAGATATTCCGGGACGGA+AGG | - | chr5_3:20745849-20745868 | None:intergenic | 55.0% | |
| GCTCAGATAAAACGGGACGG+AGG | + | chr5_3:20746048-20746067 | Msa0804750:intron | 55.0% | |
| GCTCAGATAAAACGGGACGG+AGG | + | chr5_3:20746048-20746067 | Msa0804750:intron | 55.0% | |
| ! | AAGGGTGGTGGCGAGGTTAG+GGG | - | chr5_3:20740401-20740420 | None:intergenic | 60.0% |
| ! | GAAGGGTGGTGGCGAGGTTA+GGG | - | chr5_3:20740402-20740421 | None:intergenic | 60.0% |
| ! | TGAAGGGTGGTGGCGAGGTT+AGG | - | chr5_3:20740403-20740422 | None:intergenic | 60.0% |
| ! | GATGATGAAGGGTGGTGGCG+AGG | - | chr5_3:20740408-20740427 | None:intergenic | 60.0% |
| ACCGCCATGCCATTCTGCCA+TGG | + | chr5_3:20741489-20741508 | Msa0804750:intron | 60.0% | |
| GCCATGGCAGAATGGCATGG+CGG | - | chr5_3:20741493-20741512 | None:intergenic | 60.0% | |
| GCCATGCCATTCTGCCATGG+CGG | + | chr5_3:20741492-20741511 | Msa0804750:intron | 60.0% | |
| ACCGCCATGGCAGAATGGCA+TGG | - | chr5_3:20741496-20741515 | None:intergenic | 60.0% | |
| CACTGAGCGCCTGCAGATGT+AGG | - | chr5_3:20742349-20742368 | None:intergenic | 60.0% | |
| ! | GGCGCTCAGTGCATTGATCC+TGG | + | chr5_3:20742358-20742377 | Msa0804750:CDS | 60.0% |
| GGGTTCATCGAGCTGGACCT+CGG | + | chr5_3:20742681-20742700 | Msa0804750:intron | 60.0% | |
| GTTTGTGTGGCAGAGGGAGC+AGG | + | chr5_3:20744308-20744327 | Msa0804750:CDS | 60.0% | |
| CACGAGTACTCCTTCCGTCC+CGG | + | chr5_3:20745836-20745855 | Msa0804750:intron | 60.0% | |
| TGGCGGTCATGGTACCGCCA+TGG | - | chr5_3:20741509-20741528 | None:intergenic | 65.0% | |
| GGAGTTTCACGCGGAGGACC+TGG | + | chr5_3:20743352-20743371 | Msa0804750:CDS | 65.0% | |
| TGTGGCAGAGGGAGCAGGAC+AGG | + | chr5_3:20744313-20744332 | Msa0804750:CDS | 65.0% | |
| GGTGGCGCCGCATGCCGCAA+TGG | - | chr5_3:20741423-20741442 | None:intergenic | 75.0% | |
| TGCGGCATGCGGCGCCACCA+TGG | + | chr5_3:20741424-20741443 | Msa0804750:intron | 75.0% | |
| GGCATGCGGCGCCACCATGG+CGG | + | chr5_3:20741427-20741446 | Msa0804750:intron | 75.0% | |
| GCATGCGGCGCCACCATGGC+GGG | + | chr5_3:20741428-20741447 | Msa0804750:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 20740379 | 20746774 | 20740379 | ID=Msa0804750;Name=Msa0804750 |
| chr5_3 | mRNA | 20740379 | 20746774 | 20740379 | ID=Msa0804750-mRNA-1;Parent=Msa0804750;Name=Msa0804750-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.91|0.84|1|1|1|13|195|539 |
| chr5_3 | exon | 20740379 | 20740671 | 20740379 | ID=Msa0804750-mRNA-1:exon:8364;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20741221 | 20741311 | 20741221 | ID=Msa0804750-mRNA-1:exon:8365;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20742328 | 20742401 | 20742328 | ID=Msa0804750-mRNA-1:exon:8366;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20742682 | 20742793 | 20742682 | ID=Msa0804750-mRNA-1:exon:8367;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20743090 | 20743185 | 20743090 | ID=Msa0804750-mRNA-1:exon:8368;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20743301 | 20743402 | 20743301 | ID=Msa0804750-mRNA-1:exon:8369;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20743546 | 20743620 | 20743546 | ID=Msa0804750-mRNA-1:exon:8370;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20743795 | 20743935 | 20743795 | ID=Msa0804750-mRNA-1:exon:8371;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20744031 | 20744147 | 20744031 | ID=Msa0804750-mRNA-1:exon:8372;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20744230 | 20744334 | 20744230 | ID=Msa0804750-mRNA-1:exon:8373;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20744474 | 20744554 | 20744474 | ID=Msa0804750-mRNA-1:exon:8374;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20744939 | 20745103 | 20744939 | ID=Msa0804750-mRNA-1:exon:8375;Parent=Msa0804750-mRNA-1 |
| chr5_3 | exon | 20746412 | 20746774 | 20746412 | ID=Msa0804750-mRNA-1:exon:8376;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20740379 | 20740671 | 20740379 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20741221 | 20741311 | 20741221 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20742328 | 20742401 | 20742328 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20742682 | 20742793 | 20742682 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20743090 | 20743185 | 20743090 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20743301 | 20743402 | 20743301 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20743546 | 20743620 | 20743546 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20743795 | 20743935 | 20743795 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20744031 | 20744147 | 20744031 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20744230 | 20744334 | 20744230 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20744474 | 20744554 | 20744474 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20744939 | 20745103 | 20744939 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | CDS | 20746412 | 20746579 | 20746412 | ID=Msa0804750-mRNA-1:cds;Parent=Msa0804750-mRNA-1 |
| chr5_3 | three_prime_UTR | 20746580 | 20746774 | 20746580 | ID=Msa0804750-mRNA-1:three_prime_utr;Parent=Msa0804750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
