Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806970 | XP_024639745.1 | 91.781 | 657 | 26 | 3 | 15 | 643 | 5 | 661 | 0.0 | 1234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806970 | sp|Q6JDV7|POLK_ARATH | 58.396 | 661 | 230 | 9 | 21 | 647 | 16 | 665 | 0.0 | 720 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806970 | A0A396HL96 | 91.781 | 657 | 26 | 3 | 15 | 643 | 5 | 661 | 0.0 | 1234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0711070 | Msa0806970 | 0.891269 | 4.635127e-74 | -8.615850e-47 |
| Msa0784620 | Msa0806970 | 0.811373 | 7.233198e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806970 | MtrunA17_Chr5g0393781 | 91.781 | 657 | 26 | 3 | 15 | 643 | 5 | 661 | 0.0 | 1234 |
| Msa0806970 | MtrunA17_Chr5g0393771 | 88.095 | 84 | 10 | 0 | 674 | 757 | 19 | 102 | 2.41e-46 | 162 |
| Msa0806970 | MtrunA17_Chr5g0393611 | 31.304 | 345 | 214 | 10 | 53 | 382 | 321 | 657 | 5.87e-34 | 140 |
| Msa0806970 | MtrunA17_Chr1g0207261 | 62.245 | 98 | 31 | 2 | 650 | 742 | 86 | 182 | 2.43e-25 | 106 |
| Msa0806970 | MtrunA17_Chr4g0052811 | 27.654 | 358 | 179 | 10 | 96 | 379 | 12 | 363 | 9.59e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0806970 | AT1G49980.1 | 58.396 | 661 | 230 | 9 | 21 | 647 | 16 | 665 | 0.0 | 720 |
| Msa0806970 | AT1G49980.4 | 58.396 | 661 | 230 | 9 | 21 | 647 | 16 | 665 | 0.0 | 719 |
| Msa0806970 | AT1G49980.5 | 58.396 | 661 | 230 | 9 | 21 | 647 | 16 | 665 | 0.0 | 719 |
| Msa0806970 | AT1G49980.7 | 58.396 | 661 | 230 | 9 | 21 | 647 | 16 | 665 | 0.0 | 719 |
| Msa0806970 | AT1G49980.8 | 58.396 | 661 | 230 | 9 | 21 | 647 | 16 | 665 | 0.0 | 719 |
| Msa0806970 | AT1G49980.3 | 61.412 | 609 | 192 | 7 | 21 | 596 | 16 | 614 | 0.0 | 716 |
| Msa0806970 | AT1G49980.2 | 61.412 | 609 | 192 | 7 | 21 | 596 | 16 | 614 | 0.0 | 716 |
| Msa0806970 | AT1G49980.9 | 55.449 | 523 | 200 | 8 | 147 | 647 | 1 | 512 | 1.09e-178 | 521 |
| Msa0806970 | AT1G49980.6 | 55.449 | 523 | 200 | 8 | 147 | 647 | 1 | 512 | 1.54e-178 | 521 |
| Msa0806970 | AT5G44750.1 | 29.487 | 390 | 226 | 14 | 99 | 456 | 376 | 748 | 1.05e-32 | 136 |
| Msa0806970 | AT5G44750.2 | 29.442 | 394 | 225 | 15 | 99 | 456 | 376 | 752 | 4.10e-32 | 134 |
| Msa0806970 | AT5G44740.2 | 28.134 | 359 | 178 | 10 | 95 | 379 | 11 | 363 | 3.67e-26 | 115 |
| Msa0806970 | AT5G44740.1 | 30.286 | 175 | 112 | 3 | 213 | 379 | 107 | 279 | 6.55e-14 | 75.9 |
| Msa0806970 | AT5G44740.3 | 30.286 | 175 | 112 | 3 | 213 | 379 | 124 | 296 | 7.75e-14 | 75.5 |
Find 135 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCCTTTCTTTCCTTTC+TGG | 0.035527 | 5_3:-27711729 | None:intergenic |
| TTTATACAGGCCAGGAAATT+TGG | 0.195002 | 5_3:+27706612 | Msa0806970:intron |
| TTTAAGTAACCCTATGTTAA+AGG | 0.210169 | 5_3:+27706465 | Msa0806970:CDS |
| TACTCTGTGGGTTTAGGTTT+GGG | 0.229231 | 5_3:+27708381 | Msa0806970:CDS |
| CTCGCGACCTTTCAAGGATT+TGG | 0.266763 | 5_3:+27706401 | Msa0806970:CDS |
| GACGAAAGAAACCTCATAAT+TGG | 0.286684 | 5_3:-27706530 | None:intergenic |
| GGAGTTCGTTCTGCCATGCC+TGG | 0.295650 | 5_3:+27706633 | Msa0806970:CDS |
| TTACTCTGTGGGTTTAGGTT+TGG | 0.301255 | 5_3:+27708380 | Msa0806970:CDS |
| CCTGTTTCAGTACGATTAAT+AGG | 0.312775 | 5_3:+27709194 | Msa0806970:CDS |
| TTTGAAGCAACTCGGCAAAA+TGG | 0.312958 | 5_3:-27710057 | None:intergenic |
| AAGAAGGTTCCAGTGGATTC+AGG | 0.316867 | 5_3:+27711666 | Msa0806970:CDS |
| ATTACAAATTTCATTACTTC+AGG | 0.328953 | 5_3:+27709441 | Msa0806970:CDS |
| ATCATTTCCTGACAAGAATT+AGG | 0.357770 | 5_3:-27709944 | None:intergenic |
| CCTATTAATCGTACTGAAAC+AGG | 0.360995 | 5_3:-27709194 | None:intergenic |
| TCATCTGCAAATTGCTTCTC+AGG | 0.361982 | 5_3:-27711786 | None:intergenic |
| CGAGGAAAAGACCTGCATTC+AGG | 0.364495 | 5_3:+27711640 | Msa0806970:CDS |
| GGTAAAACATACTGTCCATT+TGG | 0.365773 | 5_3:-27707777 | None:intergenic |
| ATTCTCCCCAAGCAAGATTT+CGG | 0.366592 | 5_3:+27708412 | Msa0806970:CDS |
| AAGCTTCTCGCGACCTTTCA+AGG | 0.369769 | 5_3:+27706395 | Msa0806970:CDS |
| CACTAAACTGTGATACTCTA+AGG | 0.372191 | 5_3:-27709377 | None:intergenic |
| GAATTTCATCGCTGGTAGTC+TGG | 0.379435 | 5_3:+27706847 | Msa0806970:CDS |
| GTATACTTGTTGAAATCAAC+TGG | 0.388510 | 5_3:-27706696 | None:intergenic |
| TTTCTGGACGATGGTTAAAC+TGG | 0.397629 | 5_3:-27711713 | None:intergenic |
| TTAAGTAACCCTATGTTAAA+GGG | 0.398161 | 5_3:+27706466 | Msa0806970:CDS |
| CTAATCTCCTGGAGGATGAT+AGG | 0.398223 | 5_3:+27709921 | Msa0806970:CDS |
| ATTGGCCTGCCCTTTAACAT+AGG | 0.399508 | 5_3:-27706475 | None:intergenic |
| TACAGTGATTTGACCAGAAA+AGG | 0.401634 | 5_3:+27706723 | Msa0806970:CDS |
| AGAACGAACTCCAAATTTCC+TGG | 0.407264 | 5_3:-27706622 | None:intergenic |
| GATATCCACTGCCAATTATG+AGG | 0.408271 | 5_3:+27706519 | Msa0806970:CDS |
| GATTTGGTTACATGTAGATA+TGG | 0.415193 | 5_3:+27706417 | Msa0806970:CDS |
| GAAACTGATCTTTCCCTTGA+CGG | 0.420051 | 5_3:+27709528 | Msa0806970:CDS |
| AGACTACCAGCGATGAAATT+CGG | 0.430802 | 5_3:-27706845 | None:intergenic |
| ACCTTCTTCTTCCTGAATGC+AGG | 0.431352 | 5_3:-27711651 | None:intergenic |
| ATGTGAGCAGATGCTGGATA+AGG | 0.432320 | 5_3:+27708057 | Msa0806970:CDS |
| TTACTTCAGGAGAAGCCAAT+TGG | 0.434213 | 5_3:+27709454 | Msa0806970:CDS |
| TCTCTTCCTTCTGTGAATGA+AGG | 0.436634 | 5_3:-27711522 | None:intergenic |
| ATAACAGCCAAGCGGTCATT+TGG | 0.439647 | 5_3:-27707798 | None:intergenic |
| AATCTTTCCTCAACAAAACT+TGG | 0.440500 | 5_3:-27710019 | None:intergenic |
| AAGCAGCAATCCATACCATT+TGG | 0.442071 | 5_3:+27711758 | Msa0806970:CDS |
| ATTTGCTTTGTCTATTGATT+CGG | 0.443390 | 5_3:-27710271 | None:intergenic |
| TTGGTGAAATTGAAATGAAT+GGG | 0.445538 | 5_3:+27705975 | None:intergenic |
| CAACAAGAGAAAGAGAAGAT+AGG | 0.448285 | 5_3:+27706010 | Msa0806970:CDS |
| GAGTTCGTTCTGCCATGCCT+GGG | 0.453647 | 5_3:+27706634 | Msa0806970:CDS |
| TATATATTGTACCTTTGAAT+CGG | 0.462105 | 5_3:-27710112 | None:intergenic |
| AACAAATGATTACCATCAAA+AGG | 0.462445 | 5_3:-27709582 | None:intergenic |
| TCTTTCCAAGGGCAGTTTGA+GGG | 0.475133 | 5_3:+27709878 | Msa0806970:intron |
| ATAGTCTTCTGTGTAGGATC+AGG | 0.476314 | 5_3:-27709420 | None:intergenic |
| TGATAGGCCTAATTCTTGTC+AGG | 0.480794 | 5_3:+27709937 | Msa0806970:CDS |
| GCTTCTCAGGTCTGTCCAAA+TGG | 0.486070 | 5_3:-27711773 | None:intergenic |
| ACCGAATCGCTTACTTGCTA+AGG | 0.488096 | 5_3:+27707079 | Msa0806970:CDS |
| ATGCAACAGCGCTTCATCCT+CGG | 0.489046 | 5_3:-27708469 | None:intergenic |
| TCATTTATCACATTATCAAA+AGG | 0.489528 | 5_3:+27706240 | Msa0806970:CDS |
| TTTCTTTCCTTTCTGGACGA+TGG | 0.493241 | 5_3:-27711722 | None:intergenic |
| TGATAAAAGAATTCTTGAAC+TGG | 0.493707 | 5_3:+27706372 | Msa0806970:CDS |
| CTTTCCTCAACAAAACTTGG+AGG | 0.498930 | 5_3:-27710016 | None:intergenic |
| TGTGAGCAGATGCTGGATAA+GGG | 0.498978 | 5_3:+27708058 | Msa0806970:CDS |
| TTGGCCTGCCCTTTAACATA+GGG | 0.499608 | 5_3:-27706474 | None:intergenic |
| GTTGGTGAAATTGAAATGAA+TGG | 0.501933 | 5_3:+27705974 | None:intergenic |
| GAATAACGGGTCTAATCTCC+TGG | 0.502177 | 5_3:+27709910 | Msa0806970:CDS |
| CTCAAACAGACCTTTCTGAT+AGG | 0.502889 | 5_3:-27707840 | None:intergenic |
| TCAGGTCTGTCCAAATGGTA+TGG | 0.502962 | 5_3:-27711768 | None:intergenic |
| AAGCACATGTGAGCAGATGC+TGG | 0.504634 | 5_3:+27708051 | Msa0806970:CDS |
| CACTAGCGCGAAAGCAGGAA+TGG | 0.504927 | 5_3:+27706072 | Msa0806970:CDS |
| ATTACCAAAGCTCCACTCTT+CGG | 0.505152 | 5_3:+27709613 | Msa0806970:CDS |
| AACAGACCTTTCTGATAGGA+AGG | 0.506790 | 5_3:-27707836 | None:intergenic |
| CTGATCTTTCCCTTGACGGC+AGG | 0.507407 | 5_3:+27709532 | Msa0806970:CDS |
| TTTGTAATAGTCTTCTGTGT+AGG | 0.512750 | 5_3:-27709426 | None:intergenic |
| TGCAAACTTCAGTTATATCA+AGG | 0.514648 | 5_3:-27706880 | None:intergenic |
| ACCTTAGCAAGTAAGCGATT+CGG | 0.530222 | 5_3:-27707080 | None:intergenic |
| ACTGGTCTCACATGTAGTGC+TGG | 0.531695 | 5_3:+27707050 | Msa0806970:CDS |
| ATCTGTGTGCCTGCCGTCAA+GGG | 0.534000 | 5_3:-27709541 | None:intergenic |
| CCATGCCTGGGTTTATTGCA+CGG | 0.534158 | 5_3:+27706646 | Msa0806970:CDS |
| ACTGGAACAAAGATTAACTC+TGG | 0.536947 | 5_3:-27706678 | None:intergenic |
| CATGTAACCAAATCCTTGAA+AGG | 0.537054 | 5_3:-27706408 | None:intergenic |
| GGAAATGATAATGTTGTGGT+TGG | 0.541962 | 5_3:+27709958 | Msa0806970:CDS |
| GATCTGTGTGCCTGCCGTCA+AGG | 0.543102 | 5_3:-27709542 | None:intergenic |
| TTTGAATCGGAACAGATGCT+TGG | 0.545838 | 5_3:-27710099 | None:intergenic |
| AATTAGGCCTATCATCCTCC+AGG | 0.548855 | 5_3:-27709928 | None:intergenic |
| GACATGGTGCCAACAGCCAT+TGG | 0.549036 | 5_3:-27706493 | None:intergenic |
| ATCGTCCAGAAAGGAAAGAA+AGG | 0.549142 | 5_3:+27711724 | Msa0806970:CDS |
| AGAAACCTCATAATTGGCAG+TGG | 0.550274 | 5_3:-27706524 | None:intergenic |
| AAGCATCTGTTCCGATTCAA+AGG | 0.554546 | 5_3:+27710101 | Msa0806970:CDS |
| TCCACTCTTCGGAAAACTGA+TGG | 0.556851 | 5_3:+27709624 | Msa0806970:CDS |
| TATGTTAAAGGGCAGGCCAA+TGG | 0.557242 | 5_3:+27706477 | Msa0806970:CDS |
| GTAACCCTATGTTAAAGGGC+AGG | 0.561428 | 5_3:+27706470 | Msa0806970:CDS |
| GGGTTTAGGTTTGGGAAAGA+CGG | 0.563053 | 5_3:+27708389 | Msa0806970:CDS |
| GTTTACACTAGCGCGAAAGC+AGG | 0.568256 | 5_3:+27706067 | Msa0806970:CDS |
| AGTTTAACCATCGTCCAGAA+AGG | 0.569518 | 5_3:+27711715 | Msa0806970:CDS |
| GAAAACTGATGGTGCAGAGA+AGG | 0.570685 | 5_3:+27709635 | Msa0806970:CDS |
| CTTAGAGTATCACAGTTTAG+TGG | 0.571256 | 5_3:+27709378 | Msa0806970:CDS |
| AGATGACAGAGCACCCTACA+AGG | 0.575060 | 5_3:+27711803 | Msa0806970:CDS |
| ATCCTCCCTTCCTATCAGAA+AGG | 0.575436 | 5_3:+27707830 | Msa0806970:CDS |
| TCCAGAAAGGAAAGAAAGGA+AGG | 0.579868 | 5_3:+27711728 | Msa0806970:CDS |
| TTAACGTCTCCTGAATCCAC+TGG | 0.581023 | 5_3:-27711675 | None:intergenic |
| ACCTGCATTCAGGAAGAAGA+AGG | 0.582202 | 5_3:+27711650 | Msa0806970:CDS |
| GTCGGCATTTATGAAGAGAC+TGG | 0.582863 | 5_3:+27707032 | Msa0806970:CDS |
| AGCGCGAAAGCAGGAATGGA+AGG | 0.585360 | 5_3:+27706076 | Msa0806970:CDS |
| TCAGACATAAACAAGCCAAA+TGG | 0.586732 | 5_3:+27707762 | Msa0806970:CDS |
| TCTCACATGTAGTGCTGGAG+TGG | 0.588105 | 5_3:+27707055 | Msa0806970:CDS |
| AAGGGCAGGCCAATGGCTGT+TGG | 0.602052 | 5_3:+27706484 | Msa0806970:CDS |
| CAAAAGTTGTCTCACAAGGA+GGG | 0.606022 | 5_3:+27710302 | Msa0806970:CDS |
| TATGATCCGAATTTCATCGC+TGG | 0.611918 | 5_3:+27706839 | Msa0806970:CDS |
| AGAAAGGAAAGAAAGGAAGG+AGG | 0.614792 | 5_3:+27711731 | Msa0806970:CDS |
| GTCAGGAAATGATAATGTTG+TGG | 0.616151 | 5_3:+27709954 | Msa0806970:CDS |
| GACTATAAATGTTCACTCTG+TGG | 0.619008 | 5_3:+27709983 | Msa0806970:CDS |
| GTGAAATTGAAATGAATGGG+GGG | 0.619426 | 5_3:+27705978 | None:intergenic |
| GACCTTTCTGATAGGAAGGG+AGG | 0.620126 | 5_3:-27707832 | None:intergenic |
| GAAAGACCTTCATTCACAGA+AGG | 0.620266 | 5_3:+27711516 | Msa0806970:CDS |
| CCGTGCAATAAACCCAGGCA+TGG | 0.621698 | 5_3:-27706646 | None:intergenic |
| GAAGCAAAAGTTGTCTCACA+AGG | 0.626097 | 5_3:+27710298 | Msa0806970:CDS |
| GCAAAAGTTGTCTCACAAGG+AGG | 0.627588 | 5_3:+27710301 | Msa0806970:CDS |
| AGCTTCCGTGCAATAAACCC+AGG | 0.632231 | 5_3:-27706651 | None:intergenic |
| TTGATAATGTGATAAATGAG+AGG | 0.641842 | 5_3:-27706236 | None:intergenic |
| CAGGAAGAAGAAGGTTCCAG+TGG | 0.642614 | 5_3:+27711659 | Msa0806970:CDS |
| ACAGACCTTTCTGATAGGAA+GGG | 0.643641 | 5_3:-27707835 | None:intergenic |
| TAGGAAGCGATGATAATCGA+TGG | 0.648840 | 5_3:+27706029 | Msa0806970:CDS |
| GGCAGTGGATATCATAGACA+TGG | 0.648981 | 5_3:-27706509 | None:intergenic |
| TGATAATGTGATAAATGAGA+GGG | 0.654559 | 5_3:-27706235 | None:intergenic |
| CTGTATCAGCGACAAAGTCG+TGG | 0.657275 | 5_3:-27709506 | None:intergenic |
| TGGTGAAATTGAAATGAATG+GGG | 0.660017 | 5_3:+27705976 | None:intergenic |
| ATTGCTCAAGAAATCAGAGT+CGG | 0.667415 | 5_3:+27707014 | Msa0806970:CDS |
| CAGTTTAGTGGACAAAAGTG+TGG | 0.667576 | 5_3:+27709390 | Msa0806970:CDS |
| TGAAATTGAAATGAATGGGG+GGG | 0.676417 | 5_3:+27705979 | None:intergenic |
| GGAAAAGTATCAGCAATGAG+AGG | 0.686628 | 5_3:+27708433 | Msa0806970:CDS |
| TATACATCTCACAGACAAGG+TGG | 0.687957 | 5_3:+27711582 | Msa0806970:CDS |
| CAACAGCGCTTCATCCTCGG+TGG | 0.690052 | 5_3:-27708466 | None:intergenic |
| TAACCACAGTGGATGTACAG+AGG | 0.705399 | 5_3:+27709841 | Msa0806970:CDS |
| GGTGAAATTGAAATGAATGG+GGG | 0.706066 | 5_3:+27705977 | None:intergenic |
| TAACGGGTCTAATCTCCTGG+AGG | 0.717537 | 5_3:+27709913 | Msa0806970:CDS |
| TGAAAGTCATAACAGCCAAG+CGG | 0.719674 | 5_3:-27707806 | None:intergenic |
| GATTATACATCTCACAGACA+AGG | 0.721311 | 5_3:+27711579 | Msa0806970:CDS |
| ACAATCAACCTCCTACCTCG+AGG | 0.722277 | 5_3:+27711622 | Msa0806970:CDS |
| TGATAGTGTTGACAGATTGG+GGG | 0.759194 | 5_3:+27707983 | Msa0806970:intron |
| GAACCTCTGTACATCCACTG+TGG | 0.781808 | 5_3:-27709844 | None:intergenic |
| GATGCAAGTTCTAACCACAG+TGG | 0.797600 | 5_3:+27709830 | Msa0806970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATAACTTCTTAATTT+AGG | + | chr5_3:27706302-27706321 | Msa0806970:intron | 10.0% |
| !! | ATTAATAACTTCTTAATTTA+GGG | + | chr5_3:27706303-27706322 | Msa0806970:intron | 10.0% |
| !!! | CAATAATTTTATAAATTAAC+TGG | - | chr5_3:27707887-27707906 | None:intergenic | 10.0% |
| !! | CAGTTAATTTATAAAATTAT+TGG | + | chr5_3:27707885-27707904 | Msa0806970:intron | 10.0% |
| !! | ATTATGATAAGATAAATTAT+TGG | + | chr5_3:27708927-27708946 | Msa0806970:intron | 10.0% |
| !! | ATAATTTCTATTTGTAATTA+TGG | + | chr5_3:27710570-27710589 | Msa0806970:intron | 10.0% |
| !!! | TTTTTAAATGAAATACATTG+AGG | + | chr5_3:27707234-27707253 | Msa0806970:intron | 15.0% |
| !! | AAAATTATATAAAAGGTAAC+TGG | - | chr5_3:27707394-27707413 | None:intergenic | 15.0% |
| !! | GGCTAAAAAAATTATATAAA+AGG | - | chr5_3:27707401-27707420 | None:intergenic | 15.0% |
| !!! | TCATTTTCTAAAAGAAATAT+CGG | + | chr5_3:27711214-27711233 | Msa0806970:intron | 15.0% |
| !! | TCATTTATCACATTATCAAA+AGG | + | chr5_3:27706240-27706259 | Msa0806970:CDS | 20.0% |
| !!! | CAAAAAAAAAATACCTTTTC+TGG | - | chr5_3:27706739-27706758 | None:intergenic | 20.0% |
| !!! | ATTTTTAAAGGGAAAAAAAG+AGG | - | chr5_3:27706983-27707002 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTCCCTTTAAAAA+TGG | + | chr5_3:27706982-27707001 | Msa0806970:intron | 20.0% |
| !!! | CTACATATTCCATTTTTAAA+GGG | - | chr5_3:27706994-27707013 | None:intergenic | 20.0% |
| !!! | TCTACATATTCCATTTTTAA+AGG | - | chr5_3:27706995-27707014 | None:intergenic | 20.0% |
| !! | CATGATAAAATGAAAAAAAC+TGG | - | chr5_3:27707317-27707336 | None:intergenic | 20.0% |
| !! | ATTTACTAGATAACACTAAA+AGG | + | chr5_3:27707484-27707503 | Msa0806970:intron | 20.0% |
| !! | TTTACTAGATAACACTAAAA+GGG | + | chr5_3:27707485-27707504 | Msa0806970:intron | 20.0% |
| !!! | AGCTTTGTGTTAAAATATAT+AGG | + | chr5_3:27707521-27707540 | Msa0806970:intron | 20.0% |
| !!! | TTTTTTCAGCATCATTTAAA+TGG | + | chr5_3:27708146-27708165 | Msa0806970:intron | 20.0% |
| !!! | GAACATTTTTTTTATCTTTC+TGG | + | chr5_3:27708199-27708218 | Msa0806970:intron | 20.0% |
| !!! | AAAATCCTTCTTTTAACATA+TGG | + | chr5_3:27708329-27708348 | Msa0806970:intron | 20.0% |
| !!! | ATTGAAAATTTGAAATCTAC+CGG | - | chr5_3:27708545-27708564 | None:intergenic | 20.0% |
| !! | CCAAAAATAAAACAAGTTAA+CGG | - | chr5_3:27709229-27709248 | None:intergenic | 20.0% |
| !!! | TTTATTTTTGGCAATTAAGA+TGG | + | chr5_3:27709238-27709257 | Msa0806970:intron | 20.0% |
| !! | ATTACAAATTTCATTACTTC+AGG | + | chr5_3:27709441-27709460 | Msa0806970:CDS | 20.0% |
| !!! | AAAAGAACTATTTTTCCAAT+TGG | - | chr5_3:27709472-27709491 | None:intergenic | 20.0% |
| !! | TATATATTGTACCTTTGAAT+CGG | - | chr5_3:27710115-27710134 | None:intergenic | 20.0% |
| !! | TACAATTGCAAAAAAAATAG+TGG | + | chr5_3:27710159-27710178 | Msa0806970:intron | 20.0% |
| !! | ACAATTGCAAAAAAAATAGT+GGG | + | chr5_3:27710160-27710179 | Msa0806970:intron | 20.0% |
| !! | CTAACAAAAAAATGATCAAT+GGG | - | chr5_3:27710338-27710357 | None:intergenic | 20.0% |
| !!! | CATTGATCATTTTTTTGTTA+GGG | + | chr5_3:27710337-27710356 | Msa0806970:CDS | 20.0% |
| !! | AGATTATTAGCCAATAATAA+CGG | - | chr5_3:27710410-27710429 | None:intergenic | 20.0% |
| !! | CAACAACAATAAGTAAATAA+AGG | + | chr5_3:27710782-27710801 | Msa0806970:intron | 20.0% |
| !! | CAAACAAATAGAATAAGTTT+AGG | - | chr5_3:27710901-27710920 | None:intergenic | 20.0% |
| !! | TTTAATATAATCACATGTGT+CGG | - | chr5_3:27711189-27711208 | None:intergenic | 20.0% |
| !!! | AAAAATGATGGAAAACAAAA+AGG | + | chr5_3:27711329-27711348 | Msa0806970:intron | 20.0% |
| !!! | AAAATGATGGAAAACAAAAA+GGG | + | chr5_3:27711330-27711349 | Msa0806970:intron | 20.0% |
| !! | TTGACAAAGAAAAAGTACAA+AGG | + | chr5_3:27706101-27706120 | Msa0806970:CDS | 25.0% |
| ! | ATTGTTTATGAAATGAGCAA+AGG | + | chr5_3:27706124-27706143 | Msa0806970:intron | 25.0% |
| !! | ATCCAAATATTTTCAGAATG+AGG | + | chr5_3:27706147-27706166 | Msa0806970:intron | 25.0% |
| !! | TTCCTCATTCTGAAAATATT+TGG | - | chr5_3:27706152-27706171 | None:intergenic | 25.0% |
| !! | AATATTTTCAGAATGAGGAA+CGG | + | chr5_3:27706152-27706171 | Msa0806970:intron | 25.0% |
| !! | TGATAATGTGATAAATGAGA+GGG | - | chr5_3:27706238-27706257 | None:intergenic | 25.0% |
| !!! | TTGATAATGTGATAAATGAG+AGG | - | chr5_3:27706239-27706258 | None:intergenic | 25.0% |
| ! | TGATAAAAGAATTCTTGAAC+TGG | + | chr5_3:27706372-27706391 | Msa0806970:CDS | 25.0% |
| ! | TTTAAGTAACCCTATGTTAA+AGG | + | chr5_3:27706465-27706484 | Msa0806970:CDS | 25.0% |
| ! | TTAAGTAACCCTATGTTAAA+GGG | + | chr5_3:27706466-27706485 | Msa0806970:CDS | 25.0% |
| ! | CGATTGAAGCTTATAATATA+TGG | - | chr5_3:27706555-27706574 | None:intergenic | 25.0% |
| !! | CTTTTTCCTTTAATTACTGA+TGG | + | chr5_3:27706779-27706798 | Msa0806970:intron | 25.0% |
| ! | CTGTAAGATTAAAATTGCAA+TGG | + | chr5_3:27706937-27706956 | Msa0806970:intron | 25.0% |
| ! | AAGAGGTTTAATACATTTGA+AGG | - | chr5_3:27706966-27706985 | None:intergenic | 25.0% |
| ! | AATAAAAAGAAAACACCAAG+TGG | - | chr5_3:27707215-27707234 | None:intergenic | 25.0% |
| ! | TAAATGAAATACATTGAGGA+AGG | + | chr5_3:27707238-27707257 | Msa0806970:intron | 25.0% |
| ! | TGGAAAACAGAAAATCATAA+AGG | - | chr5_3:27707297-27707316 | None:intergenic | 25.0% |
| !! | AGATATACAGGTAAAAGTTT+TGG | - | chr5_3:27707422-27707441 | None:intergenic | 25.0% |
| ! | ATGTGTAAGTTATCCAAATT+GGG | - | chr5_3:27707461-27707480 | None:intergenic | 25.0% |
| ! | AATGTGTAAGTTATCCAAAT+TGG | - | chr5_3:27707462-27707481 | None:intergenic | 25.0% |
| ! | TTACTAGATAACACTAAAAG+GGG | + | chr5_3:27707486-27707505 | Msa0806970:intron | 25.0% |
| ! | ATTAACTGGTAAGATGAAAT+TGG | - | chr5_3:27707873-27707892 | None:intergenic | 25.0% |
| !! | TATGTTTATGTCTTTGAAAG+AGG | + | chr5_3:27707938-27707957 | Msa0806970:intron | 25.0% |
| !! | GTAAGTTTAGCTTCATATAA+AGG | + | chr5_3:27708249-27708268 | Msa0806970:intron | 25.0% |
| ! | AAATGCCATATGTTAAAAGA+AGG | - | chr5_3:27708337-27708356 | None:intergenic | 25.0% |
| ! | TCAGTTATTGTTTATCTTTC+AGG | + | chr5_3:27708514-27708533 | Msa0806970:intron | 25.0% |
| ! | CAGTTATTGTTTATCTTTCA+GGG | + | chr5_3:27708515-27708534 | Msa0806970:intron | 25.0% |
| !! | ATAAGATAAATTATTGGCCT+GGG | + | chr5_3:27708933-27708952 | Msa0806970:intron | 25.0% |
| ! | CTAAGAAATACACAATCTAT+AGG | + | chr5_3:27709082-27709101 | Msa0806970:intron | 25.0% |
| ! | AAATACACAATCTATAGGTT+CGG | + | chr5_3:27709087-27709106 | Msa0806970:intron | 25.0% |
| !!! | CCGTTAACTTGTTTTATTTT+TGG | + | chr5_3:27709226-27709245 | Msa0806970:intron | 25.0% |
| !!! | TATTTTTTTCTTCTCCTCTT+AGG | + | chr5_3:27709354-27709373 | Msa0806970:intron | 25.0% |
| ! | AACAAATGATTACCATCAAA+AGG | - | chr5_3:27709585-27709604 | None:intergenic | 25.0% |
| ! | ATCGCTACTTAGAAAAATAA+GGG | - | chr5_3:27709679-27709698 | None:intergenic | 25.0% |
| ! | TATCGCTACTTAGAAAAATA+AGG | - | chr5_3:27709680-27709699 | None:intergenic | 25.0% |
| ! | AATTAGTAATGCGTAAACAT+TGG | - | chr5_3:27709763-27709782 | None:intergenic | 25.0% |
| !! | ATTTGCTTTGTCTATTGATT+CGG | - | chr5_3:27710274-27710293 | None:intergenic | 25.0% |
| ! | CCTAACAAAAAAATGATCAA+TGG | - | chr5_3:27710339-27710358 | None:intergenic | 25.0% |
| !!! | CCATTGATCATTTTTTTGTT+AGG | + | chr5_3:27710336-27710355 | Msa0806970:CDS | 25.0% |
| ! | TAAAATAGAGAAACTCATTG+AGG | + | chr5_3:27710620-27710639 | Msa0806970:intron | 25.0% |
| ! | AAAATAGAGAAACTCATTGA+GGG | + | chr5_3:27710621-27710640 | Msa0806970:intron | 25.0% |
| !! | TTTTATTCAAACAGACTCAA+AGG | + | chr5_3:27710691-27710710 | Msa0806970:intron | 25.0% |
| ! | TTTATTCAAACAGACTCAAA+GGG | + | chr5_3:27710692-27710711 | Msa0806970:intron | 25.0% |
| ! | AGTTCGAAATTGTGAATAAA+AGG | - | chr5_3:27710732-27710751 | None:intergenic | 25.0% |
| !!! | TCAGCTTTTGAGTTATATAA+TGG | - | chr5_3:27711424-27711443 | None:intergenic | 25.0% |
| ! | ATTATATAACTCAAAAGCTG+AGG | + | chr5_3:27711423-27711442 | Msa0806970:intron | 25.0% |
| ! | GAATTCTTTTATCAGCAATC+TGG | - | chr5_3:27706366-27706385 | None:intergenic | 30.0% |
| ! | GATTTGGTTACATGTAGATA+TGG | + | chr5_3:27706417-27706436 | Msa0806970:CDS | 30.0% |
| ! | ATCTCCTTTTGTCTTTATAC+AGG | + | chr5_3:27706599-27706618 | Msa0806970:intron | 30.0% |
| ! | GTATACTTGTTGAAATCAAC+TGG | - | chr5_3:27706699-27706718 | None:intergenic | 30.0% |
| AAGCTACCATCAGTAATTAA+AGG | - | chr5_3:27706788-27706807 | None:intergenic | 30.0% | |
| !!! | CATGTTTGTTAGTTTTTCAG+AGG | + | chr5_3:27706816-27706835 | Msa0806970:intron | 30.0% |
| TGCAAACTTCAGTTATATCA+AGG | - | chr5_3:27706883-27706902 | None:intergenic | 30.0% | |
| ! | TGTTGTTGATTGAGATATAC+AGG | - | chr5_3:27707434-27707453 | None:intergenic | 30.0% |
| !! | ATTGATAGTGTTGACAGATT+GGG | + | chr5_3:27707981-27708000 | Msa0806970:intron | 30.0% |
| !! | CGTATTTTGAAGGAAGTTTT+TGG | + | chr5_3:27708025-27708044 | Msa0806970:CDS | 30.0% |
| TACTTAAACAGATAGCTAAC+CGG | - | chr5_3:27708119-27708138 | None:intergenic | 30.0% | |
| !!! | TGCAGATTTTTTTTACTCTG+TGG | + | chr5_3:27708368-27708387 | Msa0806970:intron | 30.0% |
| !!! | GCAGATTTTTTTTACTCTGT+GGG | + | chr5_3:27708369-27708388 | Msa0806970:intron | 30.0% |
| !!! | TTTTTTTACTCTGTGGGTTT+AGG | + | chr5_3:27708375-27708394 | Msa0806970:CDS | 30.0% |
| GATAAGATAAATTATTGGCC+TGG | + | chr5_3:27708932-27708951 | Msa0806970:intron | 30.0% | |
| TAGCATTTGCAAGAGAAATA+TGG | - | chr5_3:27709065-27709084 | None:intergenic | 30.0% | |
| TTTGTAATAGTCTTCTGTGT+AGG | - | chr5_3:27709429-27709448 | None:intergenic | 30.0% | |
| GAGGGAAAAAATGTGAATAA+CGG | + | chr5_3:27709896-27709915 | Msa0806970:CDS | 30.0% | |
| AGGGAAAAAATGTGAATAAC+GGG | + | chr5_3:27709897-27709916 | Msa0806970:CDS | 30.0% | |
| ATCATTTCCTGACAAGAATT+AGG | - | chr5_3:27709947-27709966 | None:intergenic | 30.0% | |
| AATCTTTCCTCAACAAAACT+TGG | - | chr5_3:27710022-27710041 | None:intergenic | 30.0% | |
| ATTGTAAAAACCACGACAAA+TGG | - | chr5_3:27710145-27710164 | None:intergenic | 30.0% | |
| TGTAGCATAAACTCAACATA+TGG | + | chr5_3:27710384-27710403 | Msa0806970:intron | 30.0% | |
| TGTGTACAATTAAGACAATG+CGG | - | chr5_3:27710537-27710556 | None:intergenic | 30.0% | |
| ! | GAATAGTCTTGCTTTAATTC+AGG | - | chr5_3:27710648-27710667 | None:intergenic | 30.0% |
| TTATTCAAACAGACTCAAAG+GGG | + | chr5_3:27710693-27710712 | Msa0806970:intron | 30.0% | |
| ! | TACTTATTGTTGTTGTGAGA+TGG | - | chr5_3:27710777-27710796 | None:intergenic | 30.0% |
| TCTTAATGAGTGGTTATGTT+AGG | - | chr5_3:27710858-27710877 | None:intergenic | 30.0% | |
| ACGATTGATATCTTAATGAG+TGG | - | chr5_3:27710868-27710887 | None:intergenic | 30.0% | |
| ! | ATGCCTTTAATAGAAAGTGT+TGG | - | chr5_3:27711026-27711045 | None:intergenic | 30.0% |
| ! | TTTCTATTAAAGGCATGTCT+CGG | + | chr5_3:27711030-27711049 | Msa0806970:intron | 30.0% |
| ATGACATCATGTAATCACAT+GGG | - | chr5_3:27711080-27711099 | None:intergenic | 30.0% | |
| AATGACATCATGTAATCACA+TGG | - | chr5_3:27711081-27711100 | None:intergenic | 30.0% | |
| CTAATAATGAACGATACTGT+TGG | + | chr5_3:27711303-27711322 | Msa0806970:intron | 30.0% | |
| CAACAAGAGAAAGAGAAGAT+AGG | + | chr5_3:27706010-27706029 | Msa0806970:CDS | 35.0% | |
| CATGTAACCAAATCCTTGAA+AGG | - | chr5_3:27706411-27706430 | None:intergenic | 35.0% | |
| GACGAAAGAAACCTCATAAT+TGG | - | chr5_3:27706533-27706552 | None:intergenic | 35.0% | |
| TTTATACAGGCCAGGAAATT+TGG | + | chr5_3:27706612-27706631 | Msa0806970:intron | 35.0% | |
| ACTGGAACAAAGATTAACTC+TGG | - | chr5_3:27706681-27706700 | None:intergenic | 35.0% | |
| TACAGTGATTTGACCAGAAA+AGG | + | chr5_3:27706723-27706742 | Msa0806970:CDS | 35.0% | |
| ATTGCTCAAGAAATCAGAGT+CGG | + | chr5_3:27707014-27707033 | Msa0806970:CDS | 35.0% | |
| TGCCAAACATATTTCCCATA+TGG | + | chr5_3:27707116-27707135 | Msa0806970:intron | 35.0% | |
| GCCAAACATATTTCCCATAT+GGG | + | chr5_3:27707117-27707136 | Msa0806970:intron | 35.0% | |
| ACCCATATGGGAAATATGTT+TGG | - | chr5_3:27707121-27707140 | None:intergenic | 35.0% | |
| CTAGCAAATGTAACCCATAT+GGG | - | chr5_3:27707133-27707152 | None:intergenic | 35.0% | |
| ACTAGCAAATGTAACCCATA+TGG | - | chr5_3:27707134-27707153 | None:intergenic | 35.0% | |
| GAGATGTTAAGAGAGAATTG+AGG | - | chr5_3:27707362-27707381 | None:intergenic | 35.0% | |
| AAAAGGTAACTGGCACAATT+AGG | - | chr5_3:27707384-27707403 | None:intergenic | 35.0% | |
| ATAACACTAAAAGGGGTGAT+TGG | + | chr5_3:27707493-27707512 | Msa0806970:intron | 35.0% | |
| TAACACTAAAAGGGGTGATT+GGG | + | chr5_3:27707494-27707513 | Msa0806970:intron | 35.0% | |
| ACCACATACAATGCAAAACA+GGG | - | chr5_3:27707563-27707582 | None:intergenic | 35.0% | |
| AACCACATACAATGCAAAAC+AGG | - | chr5_3:27707564-27707583 | None:intergenic | 35.0% | |
| TAGTGATTGTTTGATCACCT+GGG | + | chr5_3:27707685-27707704 | Msa0806970:intron | 35.0% | |
| TCATAGTATGAAATTTCCCC+AGG | - | chr5_3:27707705-27707724 | None:intergenic | 35.0% | |
| ! | TTGACATTTTGCTCTCCTAT+AGG | + | chr5_3:27707734-27707753 | Msa0806970:intron | 35.0% |
| TTATGTCTGAGCAAACCTAT+AGG | - | chr5_3:27707752-27707771 | None:intergenic | 35.0% | |
| TCAGACATAAACAAGCCAAA+TGG | + | chr5_3:27707762-27707781 | Msa0806970:CDS | 35.0% | |
| GGTAAAACATACTGTCCATT+TGG | - | chr5_3:27707780-27707799 | None:intergenic | 35.0% | |
| !! | GATTGATAGTGTTGACAGAT+TGG | + | chr5_3:27707980-27707999 | Msa0806970:intron | 35.0% |
| !! | TTGATAGTGTTGACAGATTG+GGG | + | chr5_3:27707982-27708001 | Msa0806970:intron | 35.0% |
| !! | GGTTACTGAACGTATTTTGA+AGG | + | chr5_3:27708015-27708034 | Msa0806970:CDS | 35.0% |
| ! | TGTATGAACATTAGTCTAGC+TGG | - | chr5_3:27708172-27708191 | None:intergenic | 35.0% |
| TGGTTTCTACAACCAGTATT+TGG | + | chr5_3:27708219-27708238 | Msa0806970:intron | 35.0% | |
| CTTACAAACATGCCAAATAC+TGG | - | chr5_3:27708234-27708253 | None:intergenic | 35.0% | |
| ! | ACTTTTCCGAAATCTTGCTT+GGG | - | chr5_3:27708421-27708440 | None:intergenic | 35.0% |
| ! | TACTTTTCCGAAATCTTGCT+TGG | - | chr5_3:27708422-27708441 | None:intergenic | 35.0% |
| AGCGCTGTTGCATAAAAAAT+TGG | + | chr5_3:27708479-27708498 | Msa0806970:CDS | 35.0% | |
| GCGCTGTTGCATAAAAAATT+GGG | + | chr5_3:27708480-27708499 | Msa0806970:CDS | 35.0% | |
| GTTTATCTTTCAGGGAATTC+CGG | + | chr5_3:27708523-27708542 | Msa0806970:intron | 35.0% | |
| ATTGCAGTTCATCAGTTTGA+AGG | + | chr5_3:27708577-27708596 | Msa0806970:intron | 35.0% | |
| GTCTCAGATTTAGTCAGTTT+AGG | + | chr5_3:27708626-27708645 | Msa0806970:intron | 35.0% | |
| ATCCACAGATATGCAAAAAG+AGG | + | chr5_3:27708811-27708830 | Msa0806970:CDS | 35.0% | |
| ! | ATCCTCTTTTTGCATATCTG+TGG | - | chr5_3:27708816-27708835 | None:intergenic | 35.0% |
| ! | ACTGAAAACTGCTTCTTTTG+AGG | + | chr5_3:27708862-27708881 | Msa0806970:CDS | 35.0% |
| ! | TAATGAAGCTTTATCCACAG+AGG | - | chr5_3:27708961-27708980 | None:intergenic | 35.0% |
| !! | TATGATTTGTTCAAGTCCCT+TGG | + | chr5_3:27708998-27709017 | Msa0806970:intron | 35.0% |
| !! | ATGATTTGTTCAAGTCCCTT+GGG | + | chr5_3:27708999-27709018 | Msa0806970:intron | 35.0% |
| CCTATTAATCGTACTGAAAC+AGG | - | chr5_3:27709197-27709216 | None:intergenic | 35.0% | |
| CCTGTTTCAGTACGATTAAT+AGG | + | chr5_3:27709194-27709213 | Msa0806970:CDS | 35.0% | |
| ! | CATGTGTTCCTTGTTTAAGT+TGG | + | chr5_3:27709320-27709339 | Msa0806970:intron | 35.0% |
| GTTATGCACCAACTTAAACA+AGG | - | chr5_3:27709331-27709350 | None:intergenic | 35.0% | |
| CACTAAACTGTGATACTCTA+AGG | - | chr5_3:27709380-27709399 | None:intergenic | 35.0% | |
| ! | CTTAGAGTATCACAGTTTAG+TGG | + | chr5_3:27709378-27709397 | Msa0806970:CDS | 35.0% |
| ! | GATAGCAGAAATCCTTTTGA+TGG | + | chr5_3:27709570-27709589 | Msa0806970:CDS | 35.0% |
| AGAAAAATAAGGGTGGAGAA+TGG | - | chr5_3:27709669-27709688 | None:intergenic | 35.0% | |
| GCTACTTAGAAAAATAAGGG+TGG | - | chr5_3:27709676-27709695 | None:intergenic | 35.0% | |
| ! | CAGCAATCGAATGATTGTTT+TGG | + | chr5_3:27709721-27709740 | Msa0806970:intron | 35.0% |
| !!! | ATGATTGTTTTGGCTGATTG+AGG | + | chr5_3:27709731-27709750 | Msa0806970:intron | 35.0% |
| ! | GTCAGGAAATGATAATGTTG+TGG | + | chr5_3:27709954-27709973 | Msa0806970:CDS | 35.0% |
| ! | GGAAATGATAATGTTGTGGT+TGG | + | chr5_3:27709958-27709977 | Msa0806970:CDS | 35.0% |
| GACTATAAATGTTCACTCTG+TGG | + | chr5_3:27709983-27710002 | Msa0806970:CDS | 35.0% | |
| ! | TGACTTCACATTTTCTCGTA+AGG | + | chr5_3:27710202-27710221 | Msa0806970:intron | 35.0% |
| GGAGTAATCAAAGCTTATGA+TGG | + | chr5_3:27710358-27710377 | Msa0806970:intron | 35.0% | |
| GTAATCAAAGCTTATGATGG+TGG | + | chr5_3:27710361-27710380 | Msa0806970:intron | 35.0% | |
| CAACATATGGCCGTTATTAT+TGG | + | chr5_3:27710397-27710416 | Msa0806970:intron | 35.0% | |
| ! | GTAGCATGCATGAAGTTTTA+AGG | + | chr5_3:27710505-27710524 | Msa0806970:intron | 35.0% |
| AAAGCAAGACTATTCGAACA+AGG | + | chr5_3:27710653-27710672 | Msa0806970:intron | 35.0% | |
| AAGCAAGACTATTCGAACAA+GGG | + | chr5_3:27710654-27710673 | Msa0806970:intron | 35.0% | |
| GACATCTCTTAAACAAGATC+TGG | - | chr5_3:27710755-27710774 | None:intergenic | 35.0% | |
| TGTTAGGTAGGGAAGATTAA+CGG | - | chr5_3:27710842-27710861 | None:intergenic | 35.0% | |
| ATGAGTGGTTATGTTAGGTA+GGG | - | chr5_3:27710853-27710872 | None:intergenic | 35.0% | |
| AATGAGTGGTTATGTTAGGT+AGG | - | chr5_3:27710854-27710873 | None:intergenic | 35.0% | |
| CAATACATAGTTTCGCTTAG+AGG | - | chr5_3:27710935-27710954 | None:intergenic | 35.0% | |
| TAATAAGGACATGAGCAGAA+TGG | - | chr5_3:27710964-27710983 | None:intergenic | 35.0% | |
| !! | ATTTTTGTGATGGGGATGTT+GGG | + | chr5_3:27710992-27711011 | Msa0806970:intron | 35.0% |
| GCACCAACACTTTCTATTAA+AGG | + | chr5_3:27711020-27711039 | Msa0806970:intron | 35.0% | |
| !! | AAATATCGGTATTGACGTGT+TGG | + | chr5_3:27711228-27711247 | Msa0806970:intron | 35.0% |
| TACTGTTGGTGCAAAAATGA+TGG | + | chr5_3:27711317-27711336 | Msa0806970:intron | 35.0% | |
| TGATGGAAAACAAAAAGGGA+CGG | + | chr5_3:27711334-27711353 | Msa0806970:intron | 35.0% | |
| GATTATACATCTCACAGACA+AGG | + | chr5_3:27711579-27711598 | Msa0806970:CDS | 35.0% | |
| ACCCTACAAGGATAAAAACT+GGG | + | chr5_3:27711815-27711834 | Msa0806970:CDS | 35.0% | |
| ! | TCCCAGTTTTTATCCTTGTA+GGG | - | chr5_3:27711819-27711838 | None:intergenic | 35.0% |
| TAGGAAGCGATGATAATCGA+TGG | + | chr5_3:27706029-27706048 | Msa0806970:CDS | 40.0% | |
| GATATCCACTGCCAATTATG+AGG | + | chr5_3:27706519-27706538 | Msa0806970:CDS | 40.0% | |
| AGAAACCTCATAATTGGCAG+TGG | - | chr5_3:27706527-27706546 | None:intergenic | 40.0% | |
| CTGGCCTGTATAAAGACAAA+AGG | - | chr5_3:27706606-27706625 | None:intergenic | 40.0% | |
| ! | CTTTTGTCTTTATACAGGCC+AGG | + | chr5_3:27706604-27706623 | Msa0806970:intron | 40.0% |
| AGAACGAACTCCAAATTTCC+TGG | - | chr5_3:27706625-27706644 | None:intergenic | 40.0% | |
| TATGATCCGAATTTCATCGC+TGG | + | chr5_3:27706839-27706858 | Msa0806970:CDS | 40.0% | |
| AGACTACCAGCGATGAAATT+CGG | - | chr5_3:27706848-27706867 | None:intergenic | 40.0% | |
| ACCTTAGCAAGTAAGCGATT+CGG | - | chr5_3:27707083-27707102 | None:intergenic | 40.0% | |
| AAGTAACGCATGTGGATGTA+AGG | - | chr5_3:27707183-27707202 | None:intergenic | 40.0% | |
| ACTGCACTTGCACATTAATC+AGG | + | chr5_3:27707263-27707282 | Msa0806970:intron | 40.0% | |
| TCAACAACAGTTGCCCAATT+TGG | + | chr5_3:27707445-27707464 | Msa0806970:intron | 40.0% | |
| ! | TCCCTGTTTTGCATTGTATG+TGG | + | chr5_3:27707559-27707578 | Msa0806970:intron | 40.0% |
| GTAGTGATTGTTTGATCACC+TGG | + | chr5_3:27707684-27707703 | Msa0806970:intron | 40.0% | |
| AGTGATTGTTTGATCACCTG+GGG | + | chr5_3:27707686-27707705 | Msa0806970:intron | 40.0% | |
| ! | TGTTTTACCAAATGACCGCT+TGG | + | chr5_3:27707791-27707810 | Msa0806970:CDS | 40.0% |
| TGAAAGTCATAACAGCCAAG+CGG | - | chr5_3:27707809-27707828 | None:intergenic | 40.0% | |
| ACAGACCTTTCTGATAGGAA+GGG | - | chr5_3:27707838-27707857 | None:intergenic | 40.0% | |
| AACAGACCTTTCTGATAGGA+AGG | - | chr5_3:27707839-27707858 | None:intergenic | 40.0% | |
| CTCAAACAGACCTTTCTGAT+AGG | - | chr5_3:27707843-27707862 | None:intergenic | 40.0% | |
| !! | TGATAGTGTTGACAGATTGG+GGG | + | chr5_3:27707983-27708002 | Msa0806970:intron | 40.0% |
| !!! | CTTTTTTCTCAGTCAACAGC+CGG | + | chr5_3:27708097-27708116 | Msa0806970:CDS | 40.0% |
| ! | TTACTCTGTGGGTTTAGGTT+TGG | + | chr5_3:27708380-27708399 | Msa0806970:CDS | 40.0% |
| ! | TACTCTGTGGGTTTAGGTTT+GGG | + | chr5_3:27708381-27708400 | Msa0806970:CDS | 40.0% |
| ATTCTCCCCAAGCAAGATTT+CGG | + | chr5_3:27708412-27708431 | Msa0806970:CDS | 40.0% | |
| ! | CTTTTCCGAAATCTTGCTTG+GGG | - | chr5_3:27708420-27708439 | None:intergenic | 40.0% |
| !! | GGAAAAGTATCAGCAATGAG+AGG | + | chr5_3:27708433-27708452 | Msa0806970:CDS | 40.0% |
| !! | TGCAGTTTGTTACACATGCA+TGG | + | chr5_3:27708650-27708669 | Msa0806970:intron | 40.0% |
| GCTTTGCATGGTTCATTTGT+TGG | - | chr5_3:27708760-27708779 | None:intergenic | 40.0% | |
| CTGCAAACATAAGCTTTGCA+TGG | - | chr5_3:27708772-27708791 | None:intergenic | 40.0% | |
| TGCAAAGCTTATGTTTGCAG+CGG | + | chr5_3:27708772-27708791 | Msa0806970:intron | 40.0% | |
| ATGCAAAAAGAGGATCTGCA+TGG | + | chr5_3:27708821-27708840 | Msa0806970:CDS | 40.0% | |
| TGCAAAAAGAGGATCTGCAT+GGG | + | chr5_3:27708822-27708841 | Msa0806970:CDS | 40.0% | |
| !! | TGATTTGTTCAAGTCCCTTG+GGG | + | chr5_3:27709000-27709019 | Msa0806970:intron | 40.0% |
| ACATAACACATATCCCCCAA+GGG | - | chr5_3:27709017-27709036 | None:intergenic | 40.0% | |
| TCCTCAAGGCCAATATAAGA+GGG | + | chr5_3:27709261-27709280 | Msa0806970:intron | 40.0% | |
| CAGCAAGAACCCTCTTATAT+TGG | - | chr5_3:27709273-27709292 | None:intergenic | 40.0% | |
| ! | CAGTTTAGTGGACAAAAGTG+TGG | + | chr5_3:27709390-27709409 | Msa0806970:CDS | 40.0% |
| ATAGTCTTCTGTGTAGGATC+AGG | - | chr5_3:27709423-27709442 | None:intergenic | 40.0% | |
| TTACTTCAGGAGAAGCCAAT+TGG | + | chr5_3:27709454-27709473 | Msa0806970:CDS | 40.0% | |
| GAAACTGATCTTTCCCTTGA+CGG | + | chr5_3:27709528-27709547 | Msa0806970:CDS | 40.0% | |
| ATTACCAAAGCTCCACTCTT+CGG | + | chr5_3:27709613-27709632 | Msa0806970:CDS | 40.0% | |
| TGTCCTCTGCTGTATTTATC+AGG | + | chr5_3:27709787-27709806 | Msa0806970:intron | 40.0% | |
| CAACCTGATAAATACAGCAG+AGG | - | chr5_3:27709793-27709812 | None:intergenic | 40.0% | |
| CTCTGCTGTATTTATCAGGT+TGG | + | chr5_3:27709791-27709810 | Msa0806970:intron | 40.0% | |
| TGGGATCAACTTCTTTCCAA+GGG | + | chr5_3:27709867-27709886 | Msa0806970:intron | 40.0% | |
| TGATAGGCCTAATTCTTGTC+AGG | + | chr5_3:27709937-27709956 | Msa0806970:CDS | 40.0% | |
| !!! | ACTTCCTCCAAGTTTTGTTG+AGG | + | chr5_3:27710012-27710031 | Msa0806970:CDS | 40.0% |
| CTTTCCTCAACAAAACTTGG+AGG | - | chr5_3:27710019-27710038 | None:intergenic | 40.0% | |
| ! | TTTGAAGCAACTCGGCAAAA+TGG | - | chr5_3:27710060-27710079 | None:intergenic | 40.0% |
| ! | TTTTGCCGAGTTGCTTCAAA+AGG | + | chr5_3:27710060-27710079 | Msa0806970:CDS | 40.0% |
| !!! | CTGTTCCTTTTGAAGCAACT+CGG | - | chr5_3:27710068-27710087 | None:intergenic | 40.0% |
| TTTGAATCGGAACAGATGCT+TGG | - | chr5_3:27710102-27710121 | None:intergenic | 40.0% | |
| AAGCATCTGTTCCGATTCAA+AGG | + | chr5_3:27710101-27710120 | Msa0806970:CDS | 40.0% | |
| ATACCTCTTACCATTTGTCG+TGG | + | chr5_3:27710132-27710151 | Msa0806970:intron | 40.0% | |
| AAACCACGACAAATGGTAAG+AGG | - | chr5_3:27710138-27710157 | None:intergenic | 40.0% | |
| TAATCGTGTTTCTTCCAGTC+AGG | + | chr5_3:27710238-27710257 | Msa0806970:intron | 40.0% | |
| AATCGTGTTTCTTCCAGTCA+GGG | + | chr5_3:27710239-27710258 | Msa0806970:intron | 40.0% | |
| ! | GTGAGACAACTTTTGCTTCT+TGG | - | chr5_3:27710297-27710316 | None:intergenic | 40.0% |
| GAAGCAAAAGTTGTCTCACA+AGG | + | chr5_3:27710298-27710317 | Msa0806970:CDS | 40.0% | |
| CAAAAGTTGTCTCACAAGGA+GGG | + | chr5_3:27710302-27710321 | Msa0806970:CDS | 40.0% | |
| TATGTAACCTCTAAGCTGCT+AGG | + | chr5_3:27710457-27710476 | Msa0806970:intron | 40.0% | |
| AGGGAAGATTAACGGTAAGT+CGG | - | chr5_3:27710834-27710853 | None:intergenic | 40.0% | |
| !! | GATTTTTGTGATGGGGATGT+TGG | + | chr5_3:27710991-27711010 | Msa0806970:intron | 40.0% |
| CACATACAACAGACATGACA+CGG | - | chr5_3:27711257-27711276 | None:intergenic | 40.0% | |
| ! | TCCATTTTCGGCATTAGAAC+TGG | - | chr5_3:27711369-27711388 | None:intergenic | 40.0% |
| ! | AGTTCTAATGCCGAAAATGG+AGG | + | chr5_3:27711368-27711387 | Msa0806970:intron | 40.0% |
| TTCCCAAACATCAAGCTGAA+GGG | + | chr5_3:27711494-27711513 | Msa0806970:intron | 40.0% | |
| TTCCCTTCAGCTTGATGTTT+GGG | - | chr5_3:27711499-27711518 | None:intergenic | 40.0% | |
| TTTCCCTTCAGCTTGATGTT+TGG | - | chr5_3:27711500-27711519 | None:intergenic | 40.0% | |
| GAAAGACCTTCATTCACAGA+AGG | + | chr5_3:27711516-27711535 | Msa0806970:CDS | 40.0% | |
| TCTCTTCCTTCTGTGAATGA+AGG | - | chr5_3:27711525-27711544 | None:intergenic | 40.0% | |
| TATACATCTCACAGACAAGG+TGG | + | chr5_3:27711582-27711601 | Msa0806970:CDS | 40.0% | |
| TTTCTGGACGATGGTTAAAC+TGG | - | chr5_3:27711716-27711735 | None:intergenic | 40.0% | |
| AGTTTAACCATCGTCCAGAA+AGG | + | chr5_3:27711715-27711734 | Msa0806970:CDS | 40.0% | |
| TTTCTTTCCTTTCTGGACGA+TGG | - | chr5_3:27711725-27711744 | None:intergenic | 40.0% | |
| ATCGTCCAGAAAGGAAAGAA+AGG | + | chr5_3:27711724-27711743 | Msa0806970:CDS | 40.0% | |
| TCCAGAAAGGAAAGAAAGGA+AGG | + | chr5_3:27711728-27711747 | Msa0806970:CDS | 40.0% | |
| TCCTTCCTTTCTTTCCTTTC+TGG | - | chr5_3:27711732-27711751 | None:intergenic | 40.0% | |
| AGAAAGGAAAGAAAGGAAGG+AGG | + | chr5_3:27711731-27711750 | Msa0806970:CDS | 40.0% | |
| AAGCAGCAATCCATACCATT+TGG | + | chr5_3:27711758-27711777 | Msa0806970:CDS | 40.0% | |
| TCATCTGCAAATTGCTTCTC+AGG | - | chr5_3:27711789-27711808 | None:intergenic | 40.0% | |
| CACCCTACAAGGATAAAAAC+TGG | + | chr5_3:27711814-27711833 | Msa0806970:CDS | 40.0% | |
| ! | CTCCCAGTTTTTATCCTTGT+AGG | - | chr5_3:27711820-27711839 | None:intergenic | 40.0% |
| GGATAAAAACTGGGAGAATC+AGG | + | chr5_3:27711824-27711843 | Msa0806970:CDS | 40.0% | |
| GTAACCCTATGTTAAAGGGC+AGG | + | chr5_3:27706470-27706489 | Msa0806970:CDS | 45.0% | |
| TTGGCCTGCCCTTTAACATA+GGG | - | chr5_3:27706477-27706496 | None:intergenic | 45.0% | |
| ! | ATTGGCCTGCCCTTTAACAT+AGG | - | chr5_3:27706478-27706497 | None:intergenic | 45.0% |
| TATGTTAAAGGGCAGGCCAA+TGG | + | chr5_3:27706477-27706496 | Msa0806970:CDS | 45.0% | |
| GGCAGTGGATATCATAGACA+TGG | - | chr5_3:27706512-27706531 | None:intergenic | 45.0% | |
| GAATTTCATCGCTGGTAGTC+TGG | + | chr5_3:27706847-27706866 | Msa0806970:CDS | 45.0% | |
| GTCGGCATTTATGAAGAGAC+TGG | + | chr5_3:27707032-27707051 | Msa0806970:CDS | 45.0% | |
| ! | ACCGAATCGCTTACTTGCTA+AGG | + | chr5_3:27707079-27707098 | Msa0806970:CDS | 45.0% |
| AAGCGTAGAAGTAACGCATG+TGG | - | chr5_3:27707191-27707210 | None:intergenic | 45.0% | |
| TTACTTCTACGCTTGCCACT+TGG | + | chr5_3:27707197-27707216 | Msa0806970:intron | 45.0% | |
| ATAACAGCCAAGCGGTCATT+TGG | - | chr5_3:27707801-27707820 | None:intergenic | 45.0% | |
| ATCCTCCCTTCCTATCAGAA+AGG | + | chr5_3:27707830-27707849 | Msa0806970:CDS | 45.0% | |
| AGAAAGTCACTGTCGCAACT+AGG | - | chr5_3:27707918-27707937 | None:intergenic | 45.0% | |
| ATGTGAGCAGATGCTGGATA+AGG | + | chr5_3:27708057-27708076 | Msa0806970:CDS | 45.0% | |
| TGTGAGCAGATGCTGGATAA+GGG | + | chr5_3:27708058-27708077 | Msa0806970:CDS | 45.0% | |
| ! | GGGTTTAGGTTTGGGAAAGA+CGG | + | chr5_3:27708389-27708408 | Msa0806970:CDS | 45.0% |
| ! | GATTTGTTCAAGTCCCTTGG+GGG | + | chr5_3:27709001-27709020 | Msa0806970:intron | 45.0% |
| CACATAACACATATCCCCCA+AGG | - | chr5_3:27709018-27709037 | None:intergenic | 45.0% | |
| CTTGGGGGATATGTGTTATG+TGG | + | chr5_3:27709016-27709035 | Msa0806970:intron | 45.0% | |
| GGCAATTAAGATGGTCCTCA+AGG | + | chr5_3:27709247-27709266 | Msa0806970:intron | 45.0% | |
| GTCCTCAAGGCCAATATAAG+AGG | + | chr5_3:27709260-27709279 | Msa0806970:intron | 45.0% | |
| !! | ACCCTCTTATATTGGCCTTG+AGG | - | chr5_3:27709265-27709284 | None:intergenic | 45.0% |
| !! | GTGATACTCTAAGGCCTAAG+AGG | - | chr5_3:27709371-27709390 | None:intergenic | 45.0% |
| ! | TTTTCCGAAGAGTGGAGCTT+TGG | - | chr5_3:27709620-27709639 | None:intergenic | 45.0% |
| TCCACTCTTCGGAAAACTGA+TGG | + | chr5_3:27709624-27709643 | Msa0806970:CDS | 45.0% | |
| ! | ACCATCAGTTTTCCGAAGAG+TGG | - | chr5_3:27709628-27709647 | None:intergenic | 45.0% |
| ! | GAAAACTGATGGTGCAGAGA+AGG | + | chr5_3:27709635-27709654 | Msa0806970:CDS | 45.0% |
| ! | GATGCAAGTTCTAACCACAG+TGG | + | chr5_3:27709830-27709849 | Msa0806970:CDS | 45.0% |
| TAACCACAGTGGATGTACAG+AGG | + | chr5_3:27709841-27709860 | Msa0806970:CDS | 45.0% | |
| AGTGGATGTACAGAGGTTCT+GGG | + | chr5_3:27709848-27709867 | Msa0806970:intron | 45.0% | |
| CTGGGATCAACTTCTTTCCA+AGG | + | chr5_3:27709866-27709885 | Msa0806970:intron | 45.0% | |
| TTCTTTCCAAGGGCAGTTTG+AGG | + | chr5_3:27709877-27709896 | Msa0806970:intron | 45.0% | |
| TCTTTCCAAGGGCAGTTTGA+GGG | + | chr5_3:27709878-27709897 | Msa0806970:intron | 45.0% | |
| ! | TTTTTCCCTCAAACTGCCCT+TGG | - | chr5_3:27709886-27709905 | None:intergenic | 45.0% |
| !! | GAATAACGGGTCTAATCTCC+TGG | + | chr5_3:27709910-27709929 | Msa0806970:CDS | 45.0% |
| CTAATCTCCTGGAGGATGAT+AGG | + | chr5_3:27709921-27709940 | Msa0806970:CDS | 45.0% | |
| AATTAGGCCTATCATCCTCC+AGG | - | chr5_3:27709931-27709950 | None:intergenic | 45.0% | |
| GCAAAAGTTGTCTCACAAGG+AGG | + | chr5_3:27710301-27710320 | Msa0806970:CDS | 45.0% | |
| TGCTCTAGCAGTGAGAGATT+TGG | + | chr5_3:27710482-27710501 | Msa0806970:intron | 45.0% | |
| GCTCTAGCAGTGAGAGATTT+GGG | + | chr5_3:27710483-27710502 | Msa0806970:intron | 45.0% | |
| ! | AAACAGACTCAAAGGGGTGT+GGG | + | chr5_3:27710699-27710718 | Msa0806970:intron | 45.0% |
| CATTGACACATGTCAGACAC+TGG | - | chr5_3:27711154-27711173 | None:intergenic | 45.0% | |
| TGGAAAACAAAAAGGGACGG+CGG | + | chr5_3:27711337-27711356 | Msa0806970:intron | 45.0% | |
| ! | GCCAGTTCTAATGCCGAAAA+TGG | + | chr5_3:27711365-27711384 | Msa0806970:intron | 45.0% |
| CTTCCCAAACATCAAGCTGA+AGG | + | chr5_3:27711493-27711512 | Msa0806970:intron | 45.0% | |
| ACCTGCATTCAGGAAGAAGA+AGG | + | chr5_3:27711650-27711669 | Msa0806970:CDS | 45.0% | |
| ACCTTCTTCTTCCTGAATGC+AGG | - | chr5_3:27711654-27711673 | None:intergenic | 45.0% | |
| ! | AAGAAGGTTCCAGTGGATTC+AGG | + | chr5_3:27711666-27711685 | Msa0806970:CDS | 45.0% |
| TTAACGTCTCCTGAATCCAC+TGG | - | chr5_3:27711678-27711697 | None:intergenic | 45.0% | |
| TCAGGTCTGTCCAAATGGTA+TGG | - | chr5_3:27711771-27711790 | None:intergenic | 45.0% | |
| !!! | TCATTTTTTTAAAATTTTAT+TGG | + | chr5_3:27711096-27711115 | Msa0806970:intron | 5.0% |
| GTTTACACTAGCGCGAAAGC+AGG | + | chr5_3:27706067-27706086 | Msa0806970:CDS | 50.0% | |
| AAGCTTCTCGCGACCTTTCA+AGG | + | chr5_3:27706395-27706414 | Msa0806970:CDS | 50.0% | |
| CTCGCGACCTTTCAAGGATT+TGG | + | chr5_3:27706401-27706420 | Msa0806970:CDS | 50.0% | |
| CCATGCCTGGGTTTATTGCA+CGG | + | chr5_3:27706646-27706665 | Msa0806970:CDS | 50.0% | |
| AGCTTCCGTGCAATAAACCC+AGG | - | chr5_3:27706654-27706673 | None:intergenic | 50.0% | |
| ! | ACTGGTCTCACATGTAGTGC+TGG | + | chr5_3:27707050-27707069 | Msa0806970:CDS | 50.0% |
| ! | TCTCACATGTAGTGCTGGAG+TGG | + | chr5_3:27707055-27707074 | Msa0806970:CDS | 50.0% |
| GACCTTTCTGATAGGAAGGG+AGG | - | chr5_3:27707835-27707854 | None:intergenic | 50.0% | |
| ! | TGTTGACAGATTGGGGGCAT+CGG | + | chr5_3:27707989-27708008 | Msa0806970:intron | 50.0% |
| AAGCACATGTGAGCAGATGC+TGG | + | chr5_3:27708051-27708070 | Msa0806970:CDS | 50.0% | |
| ATGCAACAGCGCTTCATCCT+CGG | - | chr5_3:27708472-27708491 | None:intergenic | 50.0% | |
| !! | CTTTATCCACAGAGGTACCC+AGG | - | chr5_3:27708953-27708972 | None:intergenic | 50.0% |
| CTGTATCAGCGACAAAGTCG+TGG | - | chr5_3:27709509-27709528 | None:intergenic | 50.0% | |
| GAACCTCTGTACATCCACTG+TGG | - | chr5_3:27709847-27709866 | None:intergenic | 50.0% | |
| CAGTGGATGTACAGAGGTTC+TGG | + | chr5_3:27709847-27709866 | Msa0806970:intron | 50.0% | |
| ! | TAACGGGTCTAATCTCCTGG+AGG | + | chr5_3:27709913-27709932 | Msa0806970:CDS | 50.0% |
| GAGCAATCCTAGCAGCTTAG+AGG | - | chr5_3:27710467-27710486 | None:intergenic | 50.0% | |
| CAAACAGACTCAAAGGGGTG+TGG | + | chr5_3:27710698-27710717 | Msa0806970:intron | 50.0% | |
| ! | TTTGTGATGGGGATGTTGGG+CGG | + | chr5_3:27710995-27711014 | Msa0806970:intron | 50.0% |
| GTCAGACACTGGACACAACA+TGG | - | chr5_3:27711143-27711162 | None:intergenic | 50.0% | |
| ! | GCGTCTGTGACCTCCATTTT+CGG | - | chr5_3:27711381-27711400 | None:intergenic | 50.0% |
| GGTGCAATGCATGAGACTGA+CGG | - | chr5_3:27711403-27711422 | None:intergenic | 50.0% | |
| AGCTGAGGAGAATCTGCACA+AGG | + | chr5_3:27711438-27711457 | Msa0806970:intron | 50.0% | |
| GGAGAATCTGCACAAGGATG+TGG | + | chr5_3:27711444-27711463 | Msa0806970:intron | 50.0% | |
| ACAATCAACCTCCTACCTCG+AGG | + | chr5_3:27711622-27711641 | Msa0806970:CDS | 50.0% | |
| ! | GAATGCAGGTCTTTTCCTCG+AGG | - | chr5_3:27711640-27711659 | None:intergenic | 50.0% |
| CGAGGAAAAGACCTGCATTC+AGG | + | chr5_3:27711640-27711659 | Msa0806970:CDS | 50.0% | |
| CAGGAAGAAGAAGGTTCCAG+TGG | + | chr5_3:27711659-27711678 | Msa0806970:CDS | 50.0% | |
| GCTTCTCAGGTCTGTCCAAA+TGG | - | chr5_3:27711776-27711795 | None:intergenic | 50.0% | |
| ! | AGATGACAGAGCACCCTACA+AGG | + | chr5_3:27711803-27711822 | Msa0806970:CDS | 50.0% |
| CACTAGCGCGAAAGCAGGAA+TGG | + | chr5_3:27706072-27706091 | Msa0806970:CDS | 55.0% | |
| AGCGCGAAAGCAGGAATGGA+AGG | + | chr5_3:27706076-27706095 | Msa0806970:CDS | 55.0% | |
| ! | GACATGGTGCCAACAGCCAT+TGG | - | chr5_3:27706496-27706515 | None:intergenic | 55.0% |
| GAGTTCGTTCTGCCATGCCT+GGG | + | chr5_3:27706634-27706653 | Msa0806970:CDS | 55.0% | |
| CCGTGCAATAAACCCAGGCA+TGG | - | chr5_3:27706649-27706668 | None:intergenic | 55.0% | |
| !! | ACAGATTGGGGGCATCGGTA+AGG | + | chr5_3:27707994-27708013 | Msa0806970:intron | 55.0% |
| ! | TATTGGCCTGGGTACCTCTG+TGG | + | chr5_3:27708944-27708963 | Msa0806970:intron | 55.0% |
| CTGATCTTTCCCTTGACGGC+AGG | + | chr5_3:27709532-27709551 | Msa0806970:CDS | 55.0% | |
| ATCTGTGTGCCTGCCGTCAA+GGG | - | chr5_3:27709544-27709563 | None:intergenic | 55.0% | |
| ! | GGTCTTTTCCTCGAGGTAGG+AGG | - | chr5_3:27711633-27711652 | None:intergenic | 55.0% |
| ! | GCAGGTCTTTTCCTCGAGGT+AGG | - | chr5_3:27711636-27711655 | None:intergenic | 55.0% |
| AAGGGCAGGCCAATGGCTGT+TGG | + | chr5_3:27706484-27706503 | Msa0806970:CDS | 60.0% | |
| GGAGTTCGTTCTGCCATGCC+TGG | + | chr5_3:27706633-27706652 | Msa0806970:CDS | 60.0% | |
| ! | GAGGACGTTTTCTGCCACCG+AGG | + | chr5_3:27708452-27708471 | Msa0806970:CDS | 60.0% |
| CAACAGCGCTTCATCCTCGG+TGG | - | chr5_3:27708469-27708488 | None:intergenic | 60.0% | |
| GATCTGTGTGCCTGCCGTCA+AGG | - | chr5_3:27709545-27709564 | None:intergenic | 60.0% | |
| ! | TCGGTGCTTCTGACCCTGAC+TGG | - | chr5_3:27710255-27710274 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 27705989 | 27711860 | 27705989 | ID=Msa0806970;Name=Msa0806970 |
| chr5_3 | mRNA | 27705989 | 27711860 | 27705989 | ID=Msa0806970-mRNA-1;Parent=Msa0806970;Name=Msa0806970-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.75|0.52|1|0.68|0.58|17|0|757 |
| chr5_3 | exon | 27705989 | 27706126 | 27705989 | ID=Msa0806970-mRNA-1:exon:9805;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27706163 | 27706261 | 27706163 | ID=Msa0806970-mRNA-1:exon:9806;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27706367 | 27706540 | 27706367 | ID=Msa0806970-mRNA-1:exon:9807;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27706621 | 27706744 | 27706621 | ID=Msa0806970-mRNA-1:exon:9808;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27706828 | 27706928 | 27706828 | ID=Msa0806970-mRNA-1:exon:9809;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27707014 | 27707100 | 27707014 | ID=Msa0806970-mRNA-1:exon:9810;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27707756 | 27707851 | 27707756 | ID=Msa0806970-mRNA-1:exon:9811;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27707998 | 27708118 | 27707998 | ID=Msa0806970-mRNA-1:exon:9812;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27708373 | 27708501 | 27708373 | ID=Msa0806970-mRNA-1:exon:9813;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27708792 | 27708883 | 27708792 | ID=Msa0806970-mRNA-1:exon:9814;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27709104 | 27709215 | 27709104 | ID=Msa0806970-mRNA-1:exon:9815;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27709376 | 27709591 | 27709376 | ID=Msa0806970-mRNA-1:exon:9816;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27709607 | 27709656 | 27709607 | ID=Msa0806970-mRNA-1:exon:9817;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27709809 | 27709862 | 27709809 | ID=Msa0806970-mRNA-1:exon:9818;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27709893 | 27710122 | 27709893 | ID=Msa0806970-mRNA-1:exon:9819;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27710256 | 27710360 | 27710256 | ID=Msa0806970-mRNA-1:exon:9820;Parent=Msa0806970-mRNA-1 |
| chr5_3 | exon | 27711515 | 27711860 | 27711515 | ID=Msa0806970-mRNA-1:exon:9821;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27705989 | 27706126 | 27705989 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27706163 | 27706261 | 27706163 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27706367 | 27706540 | 27706367 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27706621 | 27706744 | 27706621 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27706828 | 27706928 | 27706828 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27707014 | 27707100 | 27707014 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27707756 | 27707851 | 27707756 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27707998 | 27708118 | 27707998 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27708373 | 27708501 | 27708373 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27708792 | 27708883 | 27708792 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27709104 | 27709215 | 27709104 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27709376 | 27709591 | 27709376 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27709607 | 27709656 | 27709607 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27709809 | 27709862 | 27709809 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27709893 | 27710122 | 27709893 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27710256 | 27710360 | 27710256 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| chr5_3 | CDS | 27711515 | 27711860 | 27711515 | ID=Msa0806970-mRNA-1:cds;Parent=Msa0806970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
