Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711070 | XP_024639745.1 | 93.760 | 657 | 25 | 2 | 15 | 655 | 5 | 661 | 0.0 | 1271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711070 | sp|Q6JDV7|POLK_ARATH | 60.000 | 660 | 233 | 7 | 21 | 659 | 16 | 665 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711070 | A0A396HL96 | 93.760 | 657 | 25 | 2 | 15 | 655 | 5 | 661 | 0.0 | 1271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0619180 | Msa0711070 | 0.817116 | 3.895413e-52 | -8.615850e-47 |
| Msa0664760 | Msa0711070 | 0.817619 | 3.001335e-52 | -8.615850e-47 |
| Msa0711070 | Msa0784620 | 0.829440 | 5.143229e-55 | -8.615850e-47 |
| Msa0711070 | Msa0806970 | 0.891269 | 4.635127e-74 | -8.615850e-47 |
| Msa0711070 | Msa0947530 | -0.808966 | 2.388681e-50 | -8.615850e-47 |
| Msa0711070 | Msa0959010 | 0.805324 | 1.410304e-49 | -8.615850e-47 |
| Msa0711070 | Msa1364060 | 0.804131 | 2.503045e-49 | -8.615850e-47 |
| Msa0711070 | Msa1442220 | -0.802510 | 5.420419e-49 | -8.615850e-47 |
| Msa0208810 | Msa0711070 | 0.812687 | 3.740198e-51 | -8.615850e-47 |
| Msa0542160 | Msa0711070 | 0.802767 | 4.799073e-49 | -8.615850e-47 |
| Msa0576890 | Msa0711070 | 0.801571 | 8.457682e-49 | -8.615850e-47 |
| Msa0578090 | Msa0711070 | 0.802261 | 6.100704e-49 | -8.615850e-47 |
| Msa0586850 | Msa0711070 | 0.805716 | 1.167055e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711070 | MtrunA17_Chr5g0393781 | 93.760 | 657 | 25 | 2 | 15 | 655 | 5 | 661 | 0.0 | 1271 |
| Msa0711070 | MtrunA17_Chr5g0393771 | 88.095 | 84 | 10 | 0 | 686 | 769 | 19 | 102 | 2.65e-46 | 162 |
| Msa0711070 | MtrunA17_Chr5g0393611 | 30.919 | 359 | 225 | 10 | 51 | 394 | 307 | 657 | 5.01e-34 | 140 |
| Msa0711070 | MtrunA17_Chr1g0207261 | 62.245 | 98 | 31 | 2 | 662 | 754 | 86 | 182 | 2.13e-25 | 106 |
| Msa0711070 | MtrunA17_Chr4g0052811 | 27.654 | 358 | 179 | 10 | 108 | 391 | 12 | 363 | 1.18e-24 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711070 | AT1G49980.4 | 60.000 | 660 | 233 | 7 | 21 | 659 | 16 | 665 | 0.0 | 753 |
| Msa0711070 | AT1G49980.5 | 60.000 | 660 | 233 | 7 | 21 | 659 | 16 | 665 | 0.0 | 753 |
| Msa0711070 | AT1G49980.7 | 60.000 | 660 | 233 | 7 | 21 | 659 | 16 | 665 | 0.0 | 753 |
| Msa0711070 | AT1G49980.8 | 60.000 | 660 | 233 | 7 | 21 | 659 | 16 | 665 | 0.0 | 753 |
| Msa0711070 | AT1G49980.1 | 60.000 | 660 | 233 | 7 | 21 | 659 | 16 | 665 | 0.0 | 753 |
| Msa0711070 | AT1G49980.3 | 63.158 | 608 | 195 | 5 | 21 | 608 | 16 | 614 | 0.0 | 749 |
| Msa0711070 | AT1G49980.2 | 63.158 | 608 | 195 | 5 | 21 | 608 | 16 | 614 | 0.0 | 749 |
| Msa0711070 | AT1G49980.9 | 55.172 | 522 | 203 | 7 | 159 | 659 | 1 | 512 | 1.75e-178 | 521 |
| Msa0711070 | AT1G49980.6 | 55.172 | 522 | 203 | 7 | 159 | 659 | 1 | 512 | 3.51e-178 | 520 |
| Msa0711070 | AT5G44750.1 | 29.487 | 390 | 226 | 14 | 111 | 468 | 376 | 748 | 1.17e-32 | 136 |
| Msa0711070 | AT5G44750.2 | 29.442 | 394 | 225 | 15 | 111 | 468 | 376 | 752 | 4.29e-32 | 134 |
| Msa0711070 | AT5G44740.2 | 28.134 | 359 | 178 | 10 | 107 | 391 | 11 | 363 | 4.67e-26 | 114 |
| Msa0711070 | AT5G44740.1 | 30.286 | 175 | 112 | 3 | 225 | 391 | 107 | 279 | 6.38e-14 | 75.9 |
| Msa0711070 | AT5G44740.3 | 30.286 | 175 | 112 | 3 | 225 | 391 | 124 | 296 | 8.52e-14 | 75.5 |
Find 140 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCCTTTCTTTCCTTTC+TGG | 0.035527 | 5_1:+2933809 | None:intergenic |
| TTCCTCATTCTGAAAATATT+TGG | 0.125767 | 5_1:+2939388 | None:intergenic |
| CTCGCGACCTTTCAAGAATT+TGG | 0.140010 | 5_1:-2939131 | Msa0711070:CDS |
| TTTATACAGGCCAGGAAATT+TGG | 0.195002 | 5_1:-2938920 | Msa0711070:intron |
| TTTAAGTAACCCTATGTTAA+AGG | 0.210169 | 5_1:-2939067 | Msa0711070:CDS |
| TACTCTGTGGGTTTAGGTTT+GGG | 0.229231 | 5_1:-2937151 | Msa0711070:CDS |
| GACGAAAGAAACCTCATAAT+TGG | 0.286684 | 5_1:+2939002 | None:intergenic |
| GGAGTTCGTTCTGCCATGCC+TGG | 0.295650 | 5_1:-2938899 | Msa0711070:CDS |
| TTACTCTGTGGGTTTAGGTT+TGG | 0.301255 | 5_1:-2937152 | Msa0711070:CDS |
| CCTGTTTCAGTACGATTAAT+AGG | 0.312775 | 5_1:-2936344 | Msa0711070:intron |
| TTTGAAGCAACTCGGCAAAA+TGG | 0.312958 | 5_1:+2935481 | None:intergenic |
| AAGAAGGTTCCAGTGGATTC+AGG | 0.316867 | 5_1:-2933872 | Msa0711070:CDS |
| ATTACAAATTTCATTACTTC+AGG | 0.328953 | 5_1:-2936097 | Msa0711070:CDS |
| ATCATTTCCTGACAAGAATT+AGG | 0.357770 | 5_1:+2935594 | None:intergenic |
| CCTATTAATCGTACTGAAAC+AGG | 0.360995 | 5_1:+2936344 | None:intergenic |
| TCATCTGCAAATTGCTTCTC+AGG | 0.361982 | 5_1:+2933752 | None:intergenic |
| CGAGGAAAAGACCTGCATTC+AGG | 0.364495 | 5_1:-2933898 | Msa0711070:CDS |
| GGTAAAACATACTGTCCATT+TGG | 0.365773 | 5_1:+2937755 | None:intergenic |
| ATTCTCCCCAAGCAAGATTT+CGG | 0.366592 | 5_1:-2937120 | Msa0711070:CDS |
| CACTAAACTGTGATACTCTA+AGG | 0.372191 | 5_1:+2936161 | None:intergenic |
| GAATTTCATCGCTGGTAGTC+TGG | 0.379435 | 5_1:-2938685 | Msa0711070:CDS |
| GTATACTTGTTGAAATCAAC+TGG | 0.388510 | 5_1:+2938836 | None:intergenic |
| TTTCTGGACGATGGTTAAAC+TGG | 0.397629 | 5_1:+2933825 | None:intergenic |
| TTAAGTAACCCTATGTTAAA+GGG | 0.398161 | 5_1:-2939066 | Msa0711070:CDS |
| CTAATCTCCTGGAGGATGAT+AGG | 0.398223 | 5_1:-2935617 | Msa0711070:CDS |
| ATTGGCCTGCCCTTTAACAT+AGG | 0.399508 | 5_1:+2939057 | None:intergenic |
| TACAGTGATTTGACCAGAAA+AGG | 0.401634 | 5_1:-2938809 | Msa0711070:intron |
| AGAACGAACTCCAAATTTCC+TGG | 0.407264 | 5_1:+2938910 | None:intergenic |
| GATATCCACTGCCAATTATG+AGG | 0.408271 | 5_1:-2939013 | Msa0711070:intron |
| AATTTGGTTACATGTAGATA+TGG | 0.415193 | 5_1:-2939115 | Msa0711070:CDS |
| GAAACTGATCTTTCCCTTGA+CGG | 0.420296 | 5_1:-2936010 | Msa0711070:CDS |
| AGACTACCAGCGATGAAATT+CGG | 0.430802 | 5_1:+2938687 | None:intergenic |
| ACCTTCTTCTTCCTGAATGC+AGG | 0.431352 | 5_1:+2933887 | None:intergenic |
| ATGTGAGCAGATGCTGGATA+AGG | 0.432320 | 5_1:-2937475 | Msa0711070:CDS |
| TTACTTCAGGAGAAGCCAAT+TGG | 0.434213 | 5_1:-2936084 | Msa0711070:CDS |
| TCTCTTCCTTCTGTGAATGA+AGG | 0.436634 | 5_1:+2934016 | None:intergenic |
| ATAACAGCCAAGCGGTCATT+TGG | 0.439647 | 5_1:+2937734 | None:intergenic |
| AATCTTTCCTCAACAAAACT+TGG | 0.440500 | 5_1:+2935519 | None:intergenic |
| AAGCAGCAATCCATACCATT+TGG | 0.442071 | 5_1:-2933780 | Msa0711070:CDS |
| ATTTGCTTTGTCTATTGATT+CGG | 0.443390 | 5_1:+2935267 | None:intergenic |
| TTGGTGAAATTGAAATGAAT+GGG | 0.445538 | 5_1:-2939562 | Msa0711070:exon |
| GAGTTCGTTCTGCCATGCCT+GGG | 0.453647 | 5_1:-2938898 | Msa0711070:CDS |
| TATATATTGTACCTTTGAAT+CGG | 0.462105 | 5_1:+2935426 | None:intergenic |
| AACAAATGATTACCATCAAA+AGG | 0.462445 | 5_1:+2935956 | None:intergenic |
| TCTTTCCAAGGGCAGTTTGA+GGG | 0.475133 | 5_1:-2935660 | Msa0711070:intron |
| ATAGTCTTCTGTGTAGGATC+AGG | 0.476314 | 5_1:+2936118 | None:intergenic |
| TGATAGGCCTAATTCTTGTC+AGG | 0.480794 | 5_1:-2935601 | Msa0711070:CDS |
| GCAACAAGAGAAAGAGAAGA+TGG | 0.483493 | 5_1:-2939528 | Msa0711070:CDS |
| AATAACGAGGAGAGAGGAAA+GGG | 0.485793 | 5_1:-2939592 | Msa0711070:five_prime_UTR |
| GCTTCTCAGGTCTGTCCAAA+TGG | 0.486070 | 5_1:+2933765 | None:intergenic |
| GAGAGGAAAGGGTTGAGTGT+TGG | 0.487455 | 5_1:-2939581 | Msa0711070:five_prime_UTR |
| ACCGAATCGCTTACTTGCTA+AGG | 0.488096 | 5_1:-2938453 | Msa0711070:intron |
| ATGCAACAGCGCTTCATCCT+CGG | 0.489046 | 5_1:+2937063 | None:intergenic |
| TCATTTATCACATTATCAAA+AGG | 0.489528 | 5_1:-2939297 | Msa0711070:intron |
| TTTCTTTCCTTTCTGGACGA+TGG | 0.493241 | 5_1:+2933816 | None:intergenic |
| TGATAAAAGAATTCTTGAAC+TGG | 0.493707 | 5_1:-2939160 | Msa0711070:CDS |
| CTTTCCTCAACAAAACTTGG+AGG | 0.498930 | 5_1:+2935522 | None:intergenic |
| TGTGAGCAGATGCTGGATAA+GGG | 0.498978 | 5_1:-2937474 | Msa0711070:CDS |
| TTGGCCTGCCCTTTAACATA+GGG | 0.499608 | 5_1:+2939058 | None:intergenic |
| GTTGGTGAAATTGAAATGAA+TGG | 0.501933 | 5_1:-2939563 | Msa0711070:exon |
| GAATAACGGGTCTAATCTCC+TGG | 0.502177 | 5_1:-2935628 | Msa0711070:CDS |
| CTCAAACAGACCTTTCTGAT+AGG | 0.502889 | 5_1:+2937692 | None:intergenic |
| TCAGGTCTGTCCAAATGGTA+TGG | 0.502962 | 5_1:+2933770 | None:intergenic |
| AAGCACATGTGAGCAGATGC+TGG | 0.504634 | 5_1:-2937481 | Msa0711070:CDS |
| CACTAGCGCGAAAGCAGGAA+TGG | 0.504927 | 5_1:-2939465 | Msa0711070:CDS |
| ATTACCAAAGCTCCACTCTT+CGG | 0.505152 | 5_1:-2935925 | Msa0711070:CDS |
| AACAGACCTTTCTGATAGGA+AGG | 0.506790 | 5_1:+2937696 | None:intergenic |
| ATCTGTGTGCCTACCGTCAA+GGG | 0.510405 | 5_1:+2935997 | None:intergenic |
| TTTGTAATAGTCTTCTGTGT+AGG | 0.512750 | 5_1:+2936112 | None:intergenic |
| TGCAAACTTCAGTTATATCA+AGG | 0.514648 | 5_1:+2938652 | None:intergenic |
| ACCTTAGCAAGTAAGCGATT+CGG | 0.530222 | 5_1:+2938452 | None:intergenic |
| ACTGGTCTCACATGTAGTGC+TGG | 0.531695 | 5_1:-2938482 | Msa0711070:CDS |
| CCATGCCTGGGTTTATTGCA+CGG | 0.534158 | 5_1:-2938886 | Msa0711070:CDS |
| ACTGGAACAAAGATTAACTC+TGG | 0.536947 | 5_1:+2938854 | None:intergenic |
| CATGTAACCAAATTCTTGAA+AGG | 0.537054 | 5_1:+2939124 | None:intergenic |
| GGAAATGATAATGTTGTGGT+TGG | 0.541962 | 5_1:-2935580 | Msa0711070:CDS |
| TTTGAATCGGAACAGATGCT+TGG | 0.545838 | 5_1:+2935439 | None:intergenic |
| AATTAGGCCTATCATCCTCC+AGG | 0.548855 | 5_1:+2935610 | None:intergenic |
| GACATGGTGCCAACAGCCAT+TGG | 0.549036 | 5_1:+2939039 | None:intergenic |
| ATCGTCCAGAAAGGAAAGAA+AGG | 0.549142 | 5_1:-2933814 | Msa0711070:CDS |
| AGAAACCTCATAATTGGCAG+TGG | 0.550274 | 5_1:+2939008 | None:intergenic |
| AAGCATCTGTTCCGATTCAA+AGG | 0.554546 | 5_1:-2935437 | Msa0711070:intron |
| TCCACTCTTCGGAAAACTGA+TGG | 0.556851 | 5_1:-2935914 | Msa0711070:CDS |
| TATGTTAAAGGGCAGGCCAA+TGG | 0.557242 | 5_1:-2939055 | Msa0711070:CDS |
| GTAACCCTATGTTAAAGGGC+AGG | 0.561428 | 5_1:-2939062 | Msa0711070:CDS |
| GGGTTTAGGTTTGGGAAAGA+CGG | 0.563053 | 5_1:-2937143 | Msa0711070:CDS |
| GTTTACACTAGCGCGAAAGC+AGG | 0.568256 | 5_1:-2939470 | Msa0711070:CDS |
| CAACAAGAGAAAGAGAAGAT+GGG | 0.568687 | 5_1:-2939527 | Msa0711070:CDS |
| AGTTTAACCATCGTCCAGAA+AGG | 0.569518 | 5_1:-2933823 | Msa0711070:CDS |
| ATTGTTTATGAAATGAGCAA+AGG | 0.569888 | 5_1:-2939413 | Msa0711070:CDS |
| GAAAACTGATGGTGCAGAGA+AGG | 0.570685 | 5_1:-2935903 | Msa0711070:intron |
| CTTAGAGTATCACAGTTTAG+TGG | 0.571256 | 5_1:-2936160 | Msa0711070:CDS |
| AGATGACAGAGCACCCTACA+AGG | 0.575060 | 5_1:-2933735 | Msa0711070:CDS |
| ATCCTCCCTTCCTATCAGAA+AGG | 0.575436 | 5_1:-2937702 | Msa0711070:intron |
| CTGATCTTTCCCTTGACGGT+AGG | 0.579399 | 5_1:-2936006 | Msa0711070:CDS |
| TCCAGAAAGGAAAGAAAGGA+AGG | 0.579868 | 5_1:-2933810 | Msa0711070:CDS |
| TTAACGTCTCCTGAATCCAC+TGG | 0.581023 | 5_1:+2933863 | None:intergenic |
| ACCTGCATTCAGGAAGAAGA+AGG | 0.582202 | 5_1:-2933888 | Msa0711070:CDS |
| GTCGGCATTTATGAAGAGAC+TGG | 0.582863 | 5_1:-2938500 | Msa0711070:CDS |
| AGCGCGAAAGCAGGAATGGA+AGG | 0.585360 | 5_1:-2939461 | Msa0711070:CDS |
| TCAGACATAAACAAGCCAAA+TGG | 0.586732 | 5_1:-2937770 | Msa0711070:CDS |
| TCTCACATGTAGTGCTGGAG+TGG | 0.588105 | 5_1:-2938477 | Msa0711070:CDS |
| GATCTGTGTGCCTACCGTCA+AGG | 0.594862 | 5_1:+2935996 | None:intergenic |
| AAGGGCAGGCCAATGGCTGT+TGG | 0.602052 | 5_1:-2939048 | Msa0711070:CDS |
| CAAAAGTTGTCTCACAAGGA+GGG | 0.606022 | 5_1:-2935236 | Msa0711070:CDS |
| TATGATCCGAATTTCATCGC+TGG | 0.611918 | 5_1:-2938693 | Msa0711070:CDS |
| AAATAACGAGGAGAGAGGAA+AGG | 0.613110 | 5_1:-2939593 | Msa0711070:five_prime_UTR |
| AGAAAGGAAAGAAAGGAAGG+AGG | 0.614792 | 5_1:-2933807 | Msa0711070:CDS |
| GTCAGGAAATGATAATGTTG+TGG | 0.616151 | 5_1:-2935584 | Msa0711070:CDS |
| GACTATAAATGTTCACTCTG+TGG | 0.619008 | 5_1:-2935555 | Msa0711070:CDS |
| GTGAAATTGAAATGAATGGG+GGG | 0.619426 | 5_1:-2939559 | Msa0711070:exon |
| GACCTTTCTGATAGGAAGGG+AGG | 0.620126 | 5_1:+2937700 | None:intergenic |
| GAAAGACCTTCATTCACAGA+AGG | 0.620266 | 5_1:-2934022 | Msa0711070:CDS |
| CCGTGCAATAAACCCAGGCA+TGG | 0.621698 | 5_1:+2938886 | None:intergenic |
| GAAGCAAAAGTTGTCTCACA+AGG | 0.626097 | 5_1:-2935240 | Msa0711070:CDS |
| GCAAAAGTTGTCTCACAAGG+AGG | 0.627588 | 5_1:-2935237 | Msa0711070:CDS |
| AGCTTCCGTGCAATAAACCC+AGG | 0.632231 | 5_1:+2938881 | None:intergenic |
| TTGATAATGTGATAAATGAG+AGG | 0.641842 | 5_1:+2939301 | None:intergenic |
| CAGGAAGAAGAAGGTTCCAG+TGG | 0.642614 | 5_1:-2933879 | Msa0711070:CDS |
| ACAGACCTTTCTGATAGGAA+GGG | 0.643641 | 5_1:+2937697 | None:intergenic |
| TGGGAAGCGATGATAATCGA+TGG | 0.648696 | 5_1:-2939508 | Msa0711070:CDS |
| GGCAGTGGATATCATAGACA+TGG | 0.648981 | 5_1:+2939023 | None:intergenic |
| TGATAATGTGATAAATGAGA+GGG | 0.654559 | 5_1:+2939302 | None:intergenic |
| CTGTATCAGCGACAAAGTCG+TGG | 0.657275 | 5_1:+2936032 | None:intergenic |
| TGGTGAAATTGAAATGAATG+GGG | 0.660017 | 5_1:-2939561 | Msa0711070:exon |
| ATTGCTCAAGAAATCAGAGT+CGG | 0.667415 | 5_1:-2938518 | Msa0711070:CDS |
| CAGTTTAGTGGACAAAAGTG+TGG | 0.667576 | 5_1:-2936148 | Msa0711070:CDS |
| TGAAATTGAAATGAATGGGG+GGG | 0.676417 | 5_1:-2939558 | Msa0711070:exon |
| GGAAAAGTATCAGCAATGAG+AGG | 0.686628 | 5_1:-2937099 | Msa0711070:CDS |
| TATACATCTCACAGACAAGG+TGG | 0.687957 | 5_1:-2933956 | Msa0711070:CDS |
| CAACAGCGCTTCATCCTCGG+TGG | 0.690052 | 5_1:+2937066 | None:intergenic |
| TAACCACAGTGGATGTACAG+AGG | 0.705399 | 5_1:-2935697 | Msa0711070:intron |
| GGTGAAATTGAAATGAATGG+GGG | 0.706066 | 5_1:-2939560 | Msa0711070:exon |
| TAACGGGTCTAATCTCCTGG+AGG | 0.717537 | 5_1:-2935625 | Msa0711070:CDS |
| TGAAAGTCATAACAGCCAAG+CGG | 0.719674 | 5_1:+2937726 | None:intergenic |
| GATTATACATCTCACAGACA+AGG | 0.721311 | 5_1:-2933959 | Msa0711070:CDS |
| ACAATCAACCTCCTACCTCG+AGG | 0.722277 | 5_1:-2933916 | Msa0711070:CDS |
| TGATAGTGTTGACAGATTGG+GGG | 0.759194 | 5_1:-2937549 | Msa0711070:intron |
| GAACCTCTGTACATCCACTG+TGG | 0.781808 | 5_1:+2935694 | None:intergenic |
| GATGCAAGTTCTAACCACAG+TGG | 0.797600 | 5_1:-2935708 | Msa0711070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATAACTTCTTAATTT+AGG | - | chr5_1:2934064-2934083 | Msa0711070:intron | 10.0% |
| !! | ATTAATAACTTCTTAATTTA+GGG | - | chr5_1:2934065-2934084 | Msa0711070:intron | 10.0% |
| !!! | CAATAATTTTATAAATTAAC+TGG | + | chr5_1:2935649-2935668 | None:intergenic | 10.0% |
| !! | CAGTTAATTTATAAAATTAT+TGG | - | chr5_1:2935647-2935666 | Msa0711070:CDS | 10.0% |
| !! | ATTATGATAAGATAAATTAT+TGG | - | chr5_1:2936684-2936703 | Msa0711070:CDS | 10.0% |
| !! | ATAATTTCTATTTGTAATTA+TGG | - | chr5_1:2938326-2938345 | Msa0711070:intron | 10.0% |
| !! | CAAAAATCAATAAATTAATA+AGG | + | chr5_1:2938735-2938754 | None:intergenic | 10.0% |
| !!! | TTTTTAAATGAAATACATTG+AGG | - | chr5_1:2934996-2935015 | Msa0711070:intron | 15.0% |
| !! | AAAATTATATAAAAGGTAAC+TGG | + | chr5_1:2935156-2935175 | None:intergenic | 15.0% |
| !! | GGCTAAAAAAATTATATAAA+AGG | + | chr5_1:2935163-2935182 | None:intergenic | 15.0% |
| !!! | TAATTTATTGATTTTTGTGA+TGG | - | chr5_1:2938738-2938757 | Msa0711070:intron | 15.0% |
| !!! | AATTTATTGATTTTTGTGAT+GGG | - | chr5_1:2938739-2938758 | Msa0711070:intron | 15.0% |
| !!! | TCATTTTCTAAAAGAAATAT+CGG | - | chr5_1:2938970-2938989 | Msa0711070:intron | 15.0% |
| !! | TCATTTATCACATTATCAAA+AGG | - | chr5_1:2933997-2934016 | Msa0711070:CDS | 20.0% |
| !!! | CAAAAAAAAAATACCTTTTC+TGG | + | chr5_1:2934501-2934520 | None:intergenic | 20.0% |
| !!! | ATTTTTAAAGGGAAAAAAAG+AGG | + | chr5_1:2934745-2934764 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTCCCTTTAAAAA+TGG | - | chr5_1:2934744-2934763 | Msa0711070:intron | 20.0% |
| !!! | CTACATATTCCATTTTTAAA+GGG | + | chr5_1:2934756-2934775 | None:intergenic | 20.0% |
| !!! | TCTACATATTCCATTTTTAA+AGG | + | chr5_1:2934757-2934776 | None:intergenic | 20.0% |
| !! | CATGATAAAATGAAAAAAAC+TGG | + | chr5_1:2935079-2935098 | None:intergenic | 20.0% |
| !! | ATTTACTAGATAACACTAAA+AGG | - | chr5_1:2935246-2935265 | Msa0711070:CDS | 20.0% |
| !! | TTTACTAGATAACACTAAAA+GGG | - | chr5_1:2935247-2935266 | Msa0711070:CDS | 20.0% |
| !!! | AGCTTTGTGTTAAAATATAT+AGG | - | chr5_1:2935283-2935302 | Msa0711070:CDS | 20.0% |
| !!! | TTTTTTCAGCATCATTTAAA+TGG | - | chr5_1:2935908-2935927 | Msa0711070:CDS | 20.0% |
| !!! | GAACATTTTTTTTATCTTTC+TGG | - | chr5_1:2935961-2935980 | Msa0711070:intron | 20.0% |
| !!! | AAAATCCTTCTTTTAACATA+TGG | - | chr5_1:2936091-2936110 | Msa0711070:CDS | 20.0% |
| !!! | ATTGAAAATTTGAAATCTAC+CGG | + | chr5_1:2936307-2936326 | None:intergenic | 20.0% |
| !! | CCAAAAATAAAACAAGTTAA+CGG | + | chr5_1:2936985-2937004 | None:intergenic | 20.0% |
| !!! | TTTATTTTTGGCAATTAAGA+TGG | - | chr5_1:2936994-2937013 | Msa0711070:intron | 20.0% |
| !! | ATTACAAATTTCATTACTTC+AGG | - | chr5_1:2937197-2937216 | Msa0711070:intron | 20.0% |
| !!! | AAAAGAACTATTTTTCCAAT+TGG | + | chr5_1:2937228-2937247 | None:intergenic | 20.0% |
| !! | TATATATTGTACCTTTGAAT+CGG | + | chr5_1:2937871-2937890 | None:intergenic | 20.0% |
| !! | TACAATTGCAAAAAAAATAG+TGG | - | chr5_1:2937915-2937934 | Msa0711070:intron | 20.0% |
| !! | ACAATTGCAAAAAAAATAGT+GGG | - | chr5_1:2937916-2937935 | Msa0711070:intron | 20.0% |
| !! | CTAACAAAAAAATGATCAAT+GGG | + | chr5_1:2938094-2938113 | None:intergenic | 20.0% |
| !!! | CATTGATCATTTTTTTGTTA+GGG | - | chr5_1:2938093-2938112 | Msa0711070:intron | 20.0% |
| !! | AGATTATTAGCCAATAATAA+CGG | + | chr5_1:2938166-2938185 | None:intergenic | 20.0% |
| !! | CAAACAAATAGAATAAGTTT+AGG | + | chr5_1:2938657-2938676 | None:intergenic | 20.0% |
| !!! | ATTTATTGATTTTTGTGATG+GGG | - | chr5_1:2938740-2938759 | Msa0711070:intron | 20.0% |
| !! | TTTAATATAATCACATGTGT+CGG | + | chr5_1:2938945-2938964 | None:intergenic | 20.0% |
| !!! | AAAAATGATGGAAAACAAAA+AGG | - | chr5_1:2939085-2939104 | Msa0711070:CDS | 20.0% |
| !!! | AAAATGATGGAAAACAAAAA+GGG | - | chr5_1:2939086-2939105 | Msa0711070:CDS | 20.0% |
| ! | TTGGTGAAATTGAAATGAAT+GGG | - | chr5_1:2933732-2933751 | Msa0711070:CDS | 25.0% |
| !! | TTGACAAAGAAAAAGTACAA+AGG | - | chr5_1:2933858-2933877 | Msa0711070:CDS | 25.0% |
| ! | ATTGTTTATGAAATGAGCAA+AGG | - | chr5_1:2933881-2933900 | Msa0711070:CDS | 25.0% |
| !! | ATCCAAATATTTTCAGAATG+AGG | - | chr5_1:2933904-2933923 | Msa0711070:CDS | 25.0% |
| !! | TTCCTCATTCTGAAAATATT+TGG | + | chr5_1:2933909-2933928 | None:intergenic | 25.0% |
| !! | AATATTTTCAGAATGAGGAA+CGG | - | chr5_1:2933909-2933928 | Msa0711070:CDS | 25.0% |
| !! | TGATAATGTGATAAATGAGA+GGG | + | chr5_1:2933995-2934014 | None:intergenic | 25.0% |
| !!! | TTGATAATGTGATAAATGAG+AGG | + | chr5_1:2933996-2934015 | None:intergenic | 25.0% |
| ! | TGATAAAAGAATTCTTGAAC+TGG | - | chr5_1:2934134-2934153 | Msa0711070:intron | 25.0% |
| ! | AATTTGGTTACATGTAGATA+TGG | - | chr5_1:2934179-2934198 | Msa0711070:intron | 25.0% |
| ! | TTTAAGTAACCCTATGTTAA+AGG | - | chr5_1:2934227-2934246 | Msa0711070:intron | 25.0% |
| ! | TTAAGTAACCCTATGTTAAA+GGG | - | chr5_1:2934228-2934247 | Msa0711070:intron | 25.0% |
| ! | CGATTGAAGCTTATAATATA+TGG | + | chr5_1:2934317-2934336 | None:intergenic | 25.0% |
| !! | CTTTTTCCTTTAATTACTGA+TGG | - | chr5_1:2934541-2934560 | Msa0711070:intron | 25.0% |
| ! | AAGAGGTTTAATACATTTGA+AGG | + | chr5_1:2934728-2934747 | None:intergenic | 25.0% |
| ! | AATAAAAAGAAAACACCAAG+TGG | + | chr5_1:2934977-2934996 | None:intergenic | 25.0% |
| ! | TAAATGAAATACATTGAGGA+AGG | - | chr5_1:2935000-2935019 | Msa0711070:intron | 25.0% |
| ! | TGGAAAACAGAAAATCATAA+AGG | + | chr5_1:2935059-2935078 | None:intergenic | 25.0% |
| !! | AGATATACAGGTAAAAGTTT+TGG | + | chr5_1:2935184-2935203 | None:intergenic | 25.0% |
| ! | ATGTGTAAGTTATCCAAATT+GGG | + | chr5_1:2935223-2935242 | None:intergenic | 25.0% |
| ! | AATGTGTAAGTTATCCAAAT+TGG | + | chr5_1:2935224-2935243 | None:intergenic | 25.0% |
| ! | TTACTAGATAACACTAAAAG+GGG | - | chr5_1:2935248-2935267 | Msa0711070:CDS | 25.0% |
| !! | TATGTTTATGTCTTTGAAAG+AGG | - | chr5_1:2935700-2935719 | Msa0711070:CDS | 25.0% |
| !! | GTAAGTTTAGCTTCATATAA+AGG | - | chr5_1:2936011-2936030 | Msa0711070:CDS | 25.0% |
| ! | AAATGCCATATGTTAAAAGA+AGG | + | chr5_1:2936099-2936118 | None:intergenic | 25.0% |
| ! | TCAGTTATTGTTTATCTTTC+AGG | - | chr5_1:2936276-2936295 | Msa0711070:intron | 25.0% |
| ! | CAGTTATTGTTTATCTTTCA+GGG | - | chr5_1:2936277-2936296 | Msa0711070:intron | 25.0% |
| !! | ATAAGATAAATTATTGGCCT+GGG | - | chr5_1:2936690-2936709 | Msa0711070:CDS | 25.0% |
| ! | CTAAGAAATACACAATCTAT+AGG | - | chr5_1:2936838-2936857 | Msa0711070:intron | 25.0% |
| ! | AAATACACAATCTATAGGTT+CGG | - | chr5_1:2936843-2936862 | Msa0711070:intron | 25.0% |
| !!! | CCGTTAACTTGTTTTATTTT+TGG | - | chr5_1:2936982-2937001 | Msa0711070:intron | 25.0% |
| !!! | TATTTTTTTCTTCTCCTCTT+AGG | - | chr5_1:2937110-2937129 | Msa0711070:CDS | 25.0% |
| ! | AACAAATGATTACCATCAAA+AGG | + | chr5_1:2937341-2937360 | None:intergenic | 25.0% |
| ! | ATCGCTACTTAGAAAAATAA+GGG | + | chr5_1:2937435-2937454 | None:intergenic | 25.0% |
| ! | TATCGCTACTTAGAAAAATA+AGG | + | chr5_1:2937436-2937455 | None:intergenic | 25.0% |
| ! | AATTAGTAATGCGTAAACAT+TGG | + | chr5_1:2937519-2937538 | None:intergenic | 25.0% |
| !! | ATTTGCTTTGTCTATTGATT+CGG | + | chr5_1:2938030-2938049 | None:intergenic | 25.0% |
| ! | CCTAACAAAAAAATGATCAA+TGG | + | chr5_1:2938095-2938114 | None:intergenic | 25.0% |
| !!! | CCATTGATCATTTTTTTGTT+AGG | - | chr5_1:2938092-2938111 | Msa0711070:intron | 25.0% |
| ! | TAAAATAGAGAAACTCATTG+AGG | - | chr5_1:2938376-2938395 | Msa0711070:intron | 25.0% |
| ! | AAAATAGAGAAACTCATTGA+GGG | - | chr5_1:2938377-2938396 | Msa0711070:intron | 25.0% |
| !! | TTTTATTCAAACAGACTCAA+AGG | - | chr5_1:2938447-2938466 | Msa0711070:intron | 25.0% |
| ! | TTTATTCAAACAGACTCAAA+GGG | - | chr5_1:2938448-2938467 | Msa0711070:intron | 25.0% |
| ! | AGTTCGAAATTGTGAATAAA+AGG | + | chr5_1:2938488-2938507 | None:intergenic | 25.0% |
| ! | CAACAACAAGAAGTAAATAA+AGG | - | chr5_1:2938538-2938557 | Msa0711070:intron | 25.0% |
| !!! | TCAGCTTTTGAGTTATATAA+TGG | + | chr5_1:2939180-2939199 | None:intergenic | 25.0% |
| ! | ATTATATAACTCAAAAGCTG+AGG | - | chr5_1:2939179-2939198 | Msa0711070:intron | 25.0% |
| ! | GTTGGTGAAATTGAAATGAA+TGG | - | chr5_1:2933731-2933750 | Msa0711070:CDS | 30.0% |
| TGGTGAAATTGAAATGAATG+GGG | - | chr5_1:2933733-2933752 | Msa0711070:CDS | 30.0% | |
| ! | GAATTCTTTTATCAGCAATC+TGG | + | chr5_1:2934128-2934147 | None:intergenic | 30.0% |
| CATGTAACCAAATTCTTGAA+AGG | + | chr5_1:2934173-2934192 | None:intergenic | 30.0% | |
| ! | ATCTCCTTTTGTCTTTATAC+AGG | - | chr5_1:2934361-2934380 | Msa0711070:intron | 30.0% |
| ! | GTATACTTGTTGAAATCAAC+TGG | + | chr5_1:2934461-2934480 | None:intergenic | 30.0% |
| AAGCTACCATCAGTAATTAA+AGG | + | chr5_1:2934550-2934569 | None:intergenic | 30.0% | |
| !!! | CATGTTTGTTAGTTTTTCAG+AGG | - | chr5_1:2934578-2934597 | Msa0711070:intron | 30.0% |
| TGCAAACTTCAGTTATATCA+AGG | + | chr5_1:2934645-2934664 | None:intergenic | 30.0% | |
| CTGTCAGATTAAAATTGCAA+TGG | - | chr5_1:2934699-2934718 | Msa0711070:intron | 30.0% | |
| ! | TGTTGTTGATTGAGATATAC+AGG | + | chr5_1:2935196-2935215 | None:intergenic | 30.0% |
| ATTAACTGGCAAGATGAAAT+TGG | + | chr5_1:2935635-2935654 | None:intergenic | 30.0% | |
| !! | ATTGATAGTGTTGACAGATT+GGG | - | chr5_1:2935743-2935762 | Msa0711070:intron | 30.0% |
| !! | CGTATTTTGAAGGAAGTTTT+TGG | - | chr5_1:2935787-2935806 | Msa0711070:intron | 30.0% |
| TACTTAAACAGATAGCTAAC+CGG | + | chr5_1:2935881-2935900 | None:intergenic | 30.0% | |
| !!! | TGCAGATTTTTTTTACTCTG+TGG | - | chr5_1:2936130-2936149 | Msa0711070:CDS | 30.0% |
| !!! | GCAGATTTTTTTTACTCTGT+GGG | - | chr5_1:2936131-2936150 | Msa0711070:CDS | 30.0% |
| !!! | TTTTTTTACTCTGTGGGTTT+AGG | - | chr5_1:2936137-2936156 | Msa0711070:CDS | 30.0% |
| GATAAGATAAATTATTGGCC+TGG | - | chr5_1:2936689-2936708 | Msa0711070:CDS | 30.0% | |
| TAGCATTTGCAAGAGAAATA+TGG | + | chr5_1:2936821-2936840 | None:intergenic | 30.0% | |
| TTTGTAATAGTCTTCTGTGT+AGG | + | chr5_1:2937185-2937204 | None:intergenic | 30.0% | |
| GAGGGAAAAAATGTGAATAA+CGG | - | chr5_1:2937652-2937671 | Msa0711070:intron | 30.0% | |
| AGGGAAAAAATGTGAATAAC+GGG | - | chr5_1:2937653-2937672 | Msa0711070:intron | 30.0% | |
| ATCATTTCCTGACAAGAATT+AGG | + | chr5_1:2937703-2937722 | None:intergenic | 30.0% | |
| AATCTTTCCTCAACAAAACT+TGG | + | chr5_1:2937778-2937797 | None:intergenic | 30.0% | |
| ATTGTAAAAACCACGACAAA+TGG | + | chr5_1:2937901-2937920 | None:intergenic | 30.0% | |
| TGTAGCATAAACTCAACATA+TGG | - | chr5_1:2938140-2938159 | Msa0711070:intron | 30.0% | |
| TGTGTACAATTAAGACAATG+CGG | + | chr5_1:2938293-2938312 | None:intergenic | 30.0% | |
| ! | GAATAGTCTTGCTTTAATTC+AGG | + | chr5_1:2938404-2938423 | None:intergenic | 30.0% |
| TTATTCAAACAGACTCAAAG+GGG | - | chr5_1:2938449-2938468 | Msa0711070:intron | 30.0% | |
| TCTTAATGAGTGGTTATGTT+AGG | + | chr5_1:2938614-2938633 | None:intergenic | 30.0% | |
| ACGATTGATATCTTAATGAG+TGG | + | chr5_1:2938624-2938643 | None:intergenic | 30.0% | |
| ! | ATGCCTTTAATAGAAAGTGT+TGG | + | chr5_1:2938782-2938801 | None:intergenic | 30.0% |
| ! | TTTCTATTAAAGGCATGTCT+CGG | - | chr5_1:2938786-2938805 | Msa0711070:intron | 30.0% |
| ATGACATCATGTAATCACAT+GGG | + | chr5_1:2938836-2938855 | None:intergenic | 30.0% | |
| AATGACATCATGTAATCACA+TGG | + | chr5_1:2938837-2938856 | None:intergenic | 30.0% | |
| CTAATAATGAACGATACTGT+TGG | - | chr5_1:2939059-2939078 | Msa0711070:CDS | 30.0% | |
| GGTGAAATTGAAATGAATGG+GGG | - | chr5_1:2933734-2933753 | Msa0711070:CDS | 35.0% | |
| GTGAAATTGAAATGAATGGG+GGG | - | chr5_1:2933735-2933754 | Msa0711070:CDS | 35.0% | |
| TGAAATTGAAATGAATGGGG+GGG | - | chr5_1:2933736-2933755 | Msa0711070:CDS | 35.0% | |
| CAACAAGAGAAAGAGAAGAT+GGG | - | chr5_1:2933767-2933786 | Msa0711070:CDS | 35.0% | |
| GACGAAAGAAACCTCATAAT+TGG | + | chr5_1:2934295-2934314 | None:intergenic | 35.0% | |
| TTTATACAGGCCAGGAAATT+TGG | - | chr5_1:2934374-2934393 | Msa0711070:intron | 35.0% | |
| ACTGGAACAAAGATTAACTC+TGG | + | chr5_1:2934443-2934462 | None:intergenic | 35.0% | |
| TACAGTGATTTGACCAGAAA+AGG | - | chr5_1:2934485-2934504 | Msa0711070:intron | 35.0% | |
| ATTGCTCAAGAAATCAGAGT+CGG | - | chr5_1:2934776-2934795 | Msa0711070:intron | 35.0% | |
| TGCCAAACATATTTCCCATA+TGG | - | chr5_1:2934878-2934897 | Msa0711070:intron | 35.0% | |
| GCCAAACATATTTCCCATAT+GGG | - | chr5_1:2934879-2934898 | Msa0711070:intron | 35.0% | |
| ACCCATATGGGAAATATGTT+TGG | + | chr5_1:2934883-2934902 | None:intergenic | 35.0% | |
| CTAGCAAATGTAACCCATAT+GGG | + | chr5_1:2934895-2934914 | None:intergenic | 35.0% | |
| ACTAGCAAATGTAACCCATA+TGG | + | chr5_1:2934896-2934915 | None:intergenic | 35.0% | |
| GAGATGTTAAGAGAGAATTG+AGG | + | chr5_1:2935124-2935143 | None:intergenic | 35.0% | |
| AAAAGGTAACTGGCACAATT+AGG | + | chr5_1:2935146-2935165 | None:intergenic | 35.0% | |
| ATAACACTAAAAGGGGTGAT+TGG | - | chr5_1:2935255-2935274 | Msa0711070:CDS | 35.0% | |
| TAACACTAAAAGGGGTGATT+GGG | - | chr5_1:2935256-2935275 | Msa0711070:CDS | 35.0% | |
| ACCACATACAATGCAAAACA+GGG | + | chr5_1:2935325-2935344 | None:intergenic | 35.0% | |
| AACCACATACAATGCAAAAC+AGG | + | chr5_1:2935326-2935345 | None:intergenic | 35.0% | |
| TAGTGATTGTTTGATCACCT+GGG | - | chr5_1:2935447-2935466 | Msa0711070:CDS | 35.0% | |
| TCATAGTATGAAATTTCCCC+AGG | + | chr5_1:2935467-2935486 | None:intergenic | 35.0% | |
| ! | TTGACATTTTGCTCTCCTAT+AGG | - | chr5_1:2935496-2935515 | Msa0711070:CDS | 35.0% |
| TTATGTCTGAGCAAACCTAT+AGG | + | chr5_1:2935514-2935533 | None:intergenic | 35.0% | |
| TCAGACATAAACAAGCCAAA+TGG | - | chr5_1:2935524-2935543 | Msa0711070:CDS | 35.0% | |
| GGTAAAACATACTGTCCATT+TGG | + | chr5_1:2935542-2935561 | None:intergenic | 35.0% | |
| !! | GATTGATAGTGTTGACAGAT+TGG | - | chr5_1:2935742-2935761 | Msa0711070:intron | 35.0% |
| !! | TTGATAGTGTTGACAGATTG+GGG | - | chr5_1:2935744-2935763 | Msa0711070:intron | 35.0% |
| !! | GGTTACTGAACGTATTTTGA+AGG | - | chr5_1:2935777-2935796 | Msa0711070:intron | 35.0% |
| ! | TGTATGAACATTAGTCTAGC+TGG | + | chr5_1:2935934-2935953 | None:intergenic | 35.0% |
| TGGTTTCTACAACCAGTATT+TGG | - | chr5_1:2935981-2936000 | Msa0711070:CDS | 35.0% | |
| CTTACAAACATGCCAAATAC+TGG | + | chr5_1:2935996-2936015 | None:intergenic | 35.0% | |
| ! | ACTTTTCCGAAATCTTGCTT+GGG | + | chr5_1:2936183-2936202 | None:intergenic | 35.0% |
| ! | TACTTTTCCGAAATCTTGCT+TGG | + | chr5_1:2936184-2936203 | None:intergenic | 35.0% |
| AGCGCTGTTGCATAAAAAAT+TGG | - | chr5_1:2936241-2936260 | Msa0711070:intron | 35.0% | |
| GCGCTGTTGCATAAAAAATT+GGG | - | chr5_1:2936242-2936261 | Msa0711070:intron | 35.0% | |
| GTTTATCTTTCAGGGAATTC+CGG | - | chr5_1:2936285-2936304 | Msa0711070:intron | 35.0% | |
| ATTGCAGTTCATCAGTTTGA+AGG | - | chr5_1:2936339-2936358 | Msa0711070:intron | 35.0% | |
| GTCTCAGATTTAGTCAGTTT+AGG | - | chr5_1:2936388-2936407 | Msa0711070:CDS | 35.0% | |
| ATCCACAGATATGCAAAAAG+AGG | - | chr5_1:2936568-2936587 | Msa0711070:intron | 35.0% | |
| ! | ATCCTCTTTTTGCATATCTG+TGG | + | chr5_1:2936573-2936592 | None:intergenic | 35.0% |
| ! | ACTGAAAACTGCTTCTTTTG+AGG | - | chr5_1:2936619-2936638 | Msa0711070:intron | 35.0% |
| ! | TAATGAAGCTTTATCCACAG+AGG | + | chr5_1:2936718-2936737 | None:intergenic | 35.0% |
| !! | TATGATTTGTTCAAGTCCCT+TGG | - | chr5_1:2936754-2936773 | Msa0711070:intron | 35.0% |
| !! | ATGATTTGTTCAAGTCCCTT+GGG | - | chr5_1:2936755-2936774 | Msa0711070:intron | 35.0% |
| CCTATTAATCGTACTGAAAC+AGG | + | chr5_1:2936953-2936972 | None:intergenic | 35.0% | |
| CCTGTTTCAGTACGATTAAT+AGG | - | chr5_1:2936950-2936969 | Msa0711070:intron | 35.0% | |
| ! | CATGTGTTCCTTGTTTAAGT+TGG | - | chr5_1:2937076-2937095 | Msa0711070:CDS | 35.0% |
| GTTATGCACCAACTTAAACA+AGG | + | chr5_1:2937087-2937106 | None:intergenic | 35.0% | |
| CACTAAACTGTGATACTCTA+AGG | + | chr5_1:2937136-2937155 | None:intergenic | 35.0% | |
| ! | CTTAGAGTATCACAGTTTAG+TGG | - | chr5_1:2937134-2937153 | Msa0711070:CDS | 35.0% |
| AGAAAAATAAGGGTGGAGAA+TGG | + | chr5_1:2937425-2937444 | None:intergenic | 35.0% | |
| GCTACTTAGAAAAATAAGGG+TGG | + | chr5_1:2937432-2937451 | None:intergenic | 35.0% | |
| ! | CAGCAATCGAATGATTGTTT+TGG | - | chr5_1:2937477-2937496 | Msa0711070:CDS | 35.0% |
| !!! | ATGATTGTTTTGGCTGATTG+AGG | - | chr5_1:2937487-2937506 | Msa0711070:CDS | 35.0% |
| ! | GTCAGGAAATGATAATGTTG+TGG | - | chr5_1:2937710-2937729 | Msa0711070:CDS | 35.0% |
| ! | GGAAATGATAATGTTGTGGT+TGG | - | chr5_1:2937714-2937733 | Msa0711070:CDS | 35.0% |
| GACTATAAATGTTCACTCTG+TGG | - | chr5_1:2937739-2937758 | Msa0711070:CDS | 35.0% | |
| ! | TGACTTCACATTTTCTCGTA+AGG | - | chr5_1:2937958-2937977 | Msa0711070:intron | 35.0% |
| GGAGTAATCAAAGCTTATGA+TGG | - | chr5_1:2938114-2938133 | Msa0711070:intron | 35.0% | |
| GTAATCAAAGCTTATGATGG+TGG | - | chr5_1:2938117-2938136 | Msa0711070:intron | 35.0% | |
| CAACATATGGCCGTTATTAT+TGG | - | chr5_1:2938153-2938172 | Msa0711070:intron | 35.0% | |
| ! | GTAGCATGCATGAAGTTTTA+AGG | - | chr5_1:2938261-2938280 | Msa0711070:intron | 35.0% |
| AAAGCAAGACTATTCGAACA+AGG | - | chr5_1:2938409-2938428 | Msa0711070:intron | 35.0% | |
| AAGCAAGACTATTCGAACAA+GGG | - | chr5_1:2938410-2938429 | Msa0711070:intron | 35.0% | |
| GACATCTCTTAAACAAGATC+TGG | + | chr5_1:2938511-2938530 | None:intergenic | 35.0% | |
| !! | TACTTCTTGTTGTTGTGAGA+TGG | + | chr5_1:2938533-2938552 | None:intergenic | 35.0% |
| TGTTAGGTAGGGAAGATTAA+CGG | + | chr5_1:2938598-2938617 | None:intergenic | 35.0% | |
| ATGAGTGGTTATGTTAGGTA+GGG | + | chr5_1:2938609-2938628 | None:intergenic | 35.0% | |
| AATGAGTGGTTATGTTAGGT+AGG | + | chr5_1:2938610-2938629 | None:intergenic | 35.0% | |
| TAATAAGGACATGAGCAGAA+TGG | + | chr5_1:2938720-2938739 | None:intergenic | 35.0% | |
| !! | ATTTTTGTGATGGGGATGTT+GGG | - | chr5_1:2938748-2938767 | Msa0711070:intron | 35.0% |
| GCACCAACACTTTCTATTAA+AGG | - | chr5_1:2938776-2938795 | Msa0711070:intron | 35.0% | |
| !! | AAATATCGGTATTGACGTGT+TGG | - | chr5_1:2938984-2939003 | Msa0711070:intron | 35.0% |
| TACTGTTGGTGCAAAAATGA+TGG | - | chr5_1:2939073-2939092 | Msa0711070:CDS | 35.0% | |
| TGATGGAAAACAAAAAGGGA+CGG | - | chr5_1:2939090-2939109 | Msa0711070:CDS | 35.0% | |
| GATTATACATCTCACAGACA+AGG | - | chr5_1:2939335-2939354 | Msa0711070:CDS | 35.0% | |
| ACCCTACAAGGATAAAAACT+GGG | - | chr5_1:2939571-2939590 | Msa0711070:five_prime_UTR | 35.0% | |
| ! | TCCCAGTTTTTATCCTTGTA+GGG | + | chr5_1:2939575-2939594 | None:intergenic | 35.0% |
| AAATAACGAGGAGAGAGGAA+AGG | - | chr5_1:2933701-2933720 | Msa0711070:CDS | 40.0% | |
| AATAACGAGGAGAGAGGAAA+GGG | - | chr5_1:2933702-2933721 | Msa0711070:CDS | 40.0% | |
| GCAACAAGAGAAAGAGAAGA+TGG | - | chr5_1:2933766-2933785 | Msa0711070:CDS | 40.0% | |
| GATATCCACTGCCAATTATG+AGG | - | chr5_1:2934281-2934300 | Msa0711070:intron | 40.0% | |
| AGAAACCTCATAATTGGCAG+TGG | + | chr5_1:2934289-2934308 | None:intergenic | 40.0% | |
| CTGGCCTGTATAAAGACAAA+AGG | + | chr5_1:2934368-2934387 | None:intergenic | 40.0% | |
| ! | CTTTTGTCTTTATACAGGCC+AGG | - | chr5_1:2934366-2934385 | Msa0711070:intron | 40.0% |
| AGAACGAACTCCAAATTTCC+TGG | + | chr5_1:2934387-2934406 | None:intergenic | 40.0% | |
| TATGATCCGAATTTCATCGC+TGG | - | chr5_1:2934601-2934620 | Msa0711070:intron | 40.0% | |
| AGACTACCAGCGATGAAATT+CGG | + | chr5_1:2934610-2934629 | None:intergenic | 40.0% | |
| ACCTTAGCAAGTAAGCGATT+CGG | + | chr5_1:2934845-2934864 | None:intergenic | 40.0% | |
| AAGTAACGCATGTGGATGTA+AGG | + | chr5_1:2934945-2934964 | None:intergenic | 40.0% | |
| ACTGCACTTGCACATTAATC+AGG | - | chr5_1:2935025-2935044 | Msa0711070:intron | 40.0% | |
| TCAACAACAGTTGCCCAATT+TGG | - | chr5_1:2935207-2935226 | Msa0711070:CDS | 40.0% | |
| ! | TCCCTGTTTTGCATTGTATG+TGG | - | chr5_1:2935321-2935340 | Msa0711070:intron | 40.0% |
| GTAGTGATTGTTTGATCACC+TGG | - | chr5_1:2935446-2935465 | Msa0711070:CDS | 40.0% | |
| AGTGATTGTTTGATCACCTG+GGG | - | chr5_1:2935448-2935467 | Msa0711070:CDS | 40.0% | |
| ! | TGTTTTACCAAATGACCGCT+TGG | - | chr5_1:2935553-2935572 | Msa0711070:CDS | 40.0% |
| TGAAAGTCATAACAGCCAAG+CGG | + | chr5_1:2935571-2935590 | None:intergenic | 40.0% | |
| ACAGACCTTTCTGATAGGAA+GGG | + | chr5_1:2935600-2935619 | None:intergenic | 40.0% | |
| AACAGACCTTTCTGATAGGA+AGG | + | chr5_1:2935601-2935620 | None:intergenic | 40.0% | |
| CTCAAACAGACCTTTCTGAT+AGG | + | chr5_1:2935605-2935624 | None:intergenic | 40.0% | |
| !! | TGATAGTGTTGACAGATTGG+GGG | - | chr5_1:2935745-2935764 | Msa0711070:intron | 40.0% |
| !!! | CTTTTTTCTCAGTCAACAGC+CGG | - | chr5_1:2935859-2935878 | Msa0711070:intron | 40.0% |
| ! | TTACTCTGTGGGTTTAGGTT+TGG | - | chr5_1:2936142-2936161 | Msa0711070:CDS | 40.0% |
| ! | TACTCTGTGGGTTTAGGTTT+GGG | - | chr5_1:2936143-2936162 | Msa0711070:CDS | 40.0% |
| ATTCTCCCCAAGCAAGATTT+CGG | - | chr5_1:2936174-2936193 | Msa0711070:intron | 40.0% | |
| ! | CTTTTCCGAAATCTTGCTTG+GGG | + | chr5_1:2936182-2936201 | None:intergenic | 40.0% |
| !! | GGAAAAGTATCAGCAATGAG+AGG | - | chr5_1:2936195-2936214 | Msa0711070:intron | 40.0% |
| !! | TGCAGTTTGTTACACATGCA+TGG | - | chr5_1:2936412-2936431 | Msa0711070:CDS | 40.0% |
| GCTTTGCATGGTTCATTTGT+TGG | + | chr5_1:2936517-2936536 | None:intergenic | 40.0% | |
| CTGCAAACATAAGCTTTGCA+TGG | + | chr5_1:2936529-2936548 | None:intergenic | 40.0% | |
| TGCAAAGCTTATGTTTGCAG+CGG | - | chr5_1:2936529-2936548 | Msa0711070:intron | 40.0% | |
| ATGCAAAAAGAGGATCTGCA+TGG | - | chr5_1:2936578-2936597 | Msa0711070:intron | 40.0% | |
| TGCAAAAAGAGGATCTGCAT+GGG | - | chr5_1:2936579-2936598 | Msa0711070:intron | 40.0% | |
| !! | TGATTTGTTCAAGTCCCTTG+GGG | - | chr5_1:2936756-2936775 | Msa0711070:intron | 40.0% |
| ACATAACACATATCCCCCAA+GGG | + | chr5_1:2936773-2936792 | None:intergenic | 40.0% | |
| TCCTCAAGGCCAATATAAGA+GGG | - | chr5_1:2937017-2937036 | Msa0711070:intron | 40.0% | |
| CAGCAAGAACCCTCTTATAT+TGG | + | chr5_1:2937029-2937048 | None:intergenic | 40.0% | |
| ! | CAGTTTAGTGGACAAAAGTG+TGG | - | chr5_1:2937146-2937165 | Msa0711070:CDS | 40.0% |
| ATAGTCTTCTGTGTAGGATC+AGG | + | chr5_1:2937179-2937198 | None:intergenic | 40.0% | |
| TTACTTCAGGAGAAGCCAAT+TGG | - | chr5_1:2937210-2937229 | Msa0711070:intron | 40.0% | |
| GAAACTGATCTTTCCCTTGA+CGG | - | chr5_1:2937284-2937303 | Msa0711070:intron | 40.0% | |
| ! | GATAGCAGAGATCCTTTTGA+TGG | - | chr5_1:2937326-2937345 | Msa0711070:intron | 40.0% |
| ATTACCAAAGCTCCACTCTT+CGG | - | chr5_1:2937369-2937388 | Msa0711070:intron | 40.0% | |
| TGTCCTCTGCTGTATTTATC+AGG | - | chr5_1:2937543-2937562 | Msa0711070:intron | 40.0% | |
| CAACCTGATAAATACAGCAG+AGG | + | chr5_1:2937549-2937568 | None:intergenic | 40.0% | |
| CTCTGCTGTATTTATCAGGT+TGG | - | chr5_1:2937547-2937566 | Msa0711070:intron | 40.0% | |
| TGGGATCAACTTCTTTCCAA+GGG | - | chr5_1:2937623-2937642 | Msa0711070:intron | 40.0% | |
| TGATAGGCCTAATTCTTGTC+AGG | - | chr5_1:2937693-2937712 | Msa0711070:intron | 40.0% | |
| !!! | ACTTCCTCCAAGTTTTGTTG+AGG | - | chr5_1:2937768-2937787 | Msa0711070:CDS | 40.0% |
| CTTTCCTCAACAAAACTTGG+AGG | + | chr5_1:2937775-2937794 | None:intergenic | 40.0% | |
| ! | TTTGAAGCAACTCGGCAAAA+TGG | + | chr5_1:2937816-2937835 | None:intergenic | 40.0% |
| ! | TTTTGCCGAGTTGCTTCAAA+AGG | - | chr5_1:2937816-2937835 | Msa0711070:intron | 40.0% |
| !!! | CTGTTCCTTTTGAAGCAACT+CGG | + | chr5_1:2937824-2937843 | None:intergenic | 40.0% |
| TTTGAATCGGAACAGATGCT+TGG | + | chr5_1:2937858-2937877 | None:intergenic | 40.0% | |
| AAGCATCTGTTCCGATTCAA+AGG | - | chr5_1:2937857-2937876 | Msa0711070:intron | 40.0% | |
| ATACCTCTTACCATTTGTCG+TGG | - | chr5_1:2937888-2937907 | Msa0711070:intron | 40.0% | |
| AAACCACGACAAATGGTAAG+AGG | + | chr5_1:2937894-2937913 | None:intergenic | 40.0% | |
| TAATCGTGTTTCTTCCAGTC+AGG | - | chr5_1:2937994-2938013 | Msa0711070:intron | 40.0% | |
| AATCGTGTTTCTTCCAGTCA+GGG | - | chr5_1:2937995-2938014 | Msa0711070:intron | 40.0% | |
| ! | GTGAGACAACTTTTGCTTCT+TGG | + | chr5_1:2938053-2938072 | None:intergenic | 40.0% |
| GAAGCAAAAGTTGTCTCACA+AGG | - | chr5_1:2938054-2938073 | Msa0711070:intron | 40.0% | |
| CAAAAGTTGTCTCACAAGGA+GGG | - | chr5_1:2938058-2938077 | Msa0711070:intron | 40.0% | |
| TATGTAACCTCTAAGCTGCT+AGG | - | chr5_1:2938213-2938232 | Msa0711070:intron | 40.0% | |
| AGGGAAGATTAACGGTAAGT+CGG | + | chr5_1:2938590-2938609 | None:intergenic | 40.0% | |
| !! | GATTTTTGTGATGGGGATGT+TGG | - | chr5_1:2938747-2938766 | Msa0711070:intron | 40.0% |
| CACATACAACAGACATGACA+CGG | + | chr5_1:2939013-2939032 | None:intergenic | 40.0% | |
| ! | TCCATTTTCGGCATTAGAAC+TGG | + | chr5_1:2939125-2939144 | None:intergenic | 40.0% |
| ! | AGTTCTAATGCCGAAAATGG+AGG | - | chr5_1:2939124-2939143 | Msa0711070:CDS | 40.0% |
| TTCCCAAACATCAAGCTGAA+GGG | - | chr5_1:2939250-2939269 | Msa0711070:intron | 40.0% | |
| TTCCCTTCAGCTTGATGTTT+GGG | + | chr5_1:2939255-2939274 | None:intergenic | 40.0% | |
| TTTCCCTTCAGCTTGATGTT+TGG | + | chr5_1:2939256-2939275 | None:intergenic | 40.0% | |
| GAAAGACCTTCATTCACAGA+AGG | - | chr5_1:2939272-2939291 | Msa0711070:intron | 40.0% | |
| TCTCTTCCTTCTGTGAATGA+AGG | + | chr5_1:2939281-2939300 | None:intergenic | 40.0% | |
| TATACATCTCACAGACAAGG+TGG | - | chr5_1:2939338-2939357 | Msa0711070:CDS | 40.0% | |
| TTTCTGGACGATGGTTAAAC+TGG | + | chr5_1:2939472-2939491 | None:intergenic | 40.0% | |
| AGTTTAACCATCGTCCAGAA+AGG | - | chr5_1:2939471-2939490 | Msa0711070:CDS | 40.0% | |
| TTTCTTTCCTTTCTGGACGA+TGG | + | chr5_1:2939481-2939500 | None:intergenic | 40.0% | |
| ATCGTCCAGAAAGGAAAGAA+AGG | - | chr5_1:2939480-2939499 | Msa0711070:CDS | 40.0% | |
| TCCAGAAAGGAAAGAAAGGA+AGG | - | chr5_1:2939484-2939503 | Msa0711070:CDS | 40.0% | |
| TCCTTCCTTTCTTTCCTTTC+TGG | + | chr5_1:2939488-2939507 | None:intergenic | 40.0% | |
| AGAAAGGAAAGAAAGGAAGG+AGG | - | chr5_1:2939487-2939506 | Msa0711070:CDS | 40.0% | |
| AAGCAGCAATCCATACCATT+TGG | - | chr5_1:2939514-2939533 | Msa0711070:CDS | 40.0% | |
| TCATCTGCAAATTGCTTCTC+AGG | + | chr5_1:2939545-2939564 | None:intergenic | 40.0% | |
| CACCCTACAAGGATAAAAAC+TGG | - | chr5_1:2939570-2939589 | Msa0711070:exon | 40.0% | |
| ! | CTCCCAGTTTTTATCCTTGT+AGG | + | chr5_1:2939576-2939595 | None:intergenic | 40.0% |
| GGATAAAAACTGGGAGAATC+AGG | - | chr5_1:2939580-2939599 | Msa0711070:five_prime_UTR | 40.0% | |
| TGGGAAGCGATGATAATCGA+TGG | - | chr5_1:2933786-2933805 | Msa0711070:CDS | 45.0% | |
| CTCGCGACCTTTCAAGAATT+TGG | - | chr5_1:2934163-2934182 | Msa0711070:intron | 45.0% | |
| GTAACCCTATGTTAAAGGGC+AGG | - | chr5_1:2934232-2934251 | Msa0711070:intron | 45.0% | |
| TTGGCCTGCCCTTTAACATA+GGG | + | chr5_1:2934239-2934258 | None:intergenic | 45.0% | |
| ! | ATTGGCCTGCCCTTTAACAT+AGG | + | chr5_1:2934240-2934259 | None:intergenic | 45.0% |
| TATGTTAAAGGGCAGGCCAA+TGG | - | chr5_1:2934239-2934258 | Msa0711070:intron | 45.0% | |
| GGCAGTGGATATCATAGACA+TGG | + | chr5_1:2934274-2934293 | None:intergenic | 45.0% | |
| GAATTTCATCGCTGGTAGTC+TGG | - | chr5_1:2934609-2934628 | Msa0711070:intron | 45.0% | |
| GTCGGCATTTATGAAGAGAC+TGG | - | chr5_1:2934794-2934813 | Msa0711070:intron | 45.0% | |
| ! | ACCGAATCGCTTACTTGCTA+AGG | - | chr5_1:2934841-2934860 | Msa0711070:intron | 45.0% |
| AAGCGTAGAAGTAACGCATG+TGG | + | chr5_1:2934953-2934972 | None:intergenic | 45.0% | |
| TTACTTCTACGCTTGCCACT+TGG | - | chr5_1:2934959-2934978 | Msa0711070:intron | 45.0% | |
| ATAACAGCCAAGCGGTCATT+TGG | + | chr5_1:2935563-2935582 | None:intergenic | 45.0% | |
| ATCCTCCCTTCCTATCAGAA+AGG | - | chr5_1:2935592-2935611 | Msa0711070:CDS | 45.0% | |
| AGAAAGTCACTGTCGCAACT+AGG | + | chr5_1:2935680-2935699 | None:intergenic | 45.0% | |
| ATGTGAGCAGATGCTGGATA+AGG | - | chr5_1:2935819-2935838 | Msa0711070:intron | 45.0% | |
| TGTGAGCAGATGCTGGATAA+GGG | - | chr5_1:2935820-2935839 | Msa0711070:intron | 45.0% | |
| ! | GGGTTTAGGTTTGGGAAAGA+CGG | - | chr5_1:2936151-2936170 | Msa0711070:CDS | 45.0% |
| ! | GATTTGTTCAAGTCCCTTGG+GGG | - | chr5_1:2936757-2936776 | Msa0711070:intron | 45.0% |
| CACATAACACATATCCCCCA+AGG | + | chr5_1:2936774-2936793 | None:intergenic | 45.0% | |
| CTTGGGGGATATGTGTTATG+TGG | - | chr5_1:2936772-2936791 | Msa0711070:intron | 45.0% | |
| GGCAATTAAGATGGTCCTCA+AGG | - | chr5_1:2937003-2937022 | Msa0711070:intron | 45.0% | |
| GTCCTCAAGGCCAATATAAG+AGG | - | chr5_1:2937016-2937035 | Msa0711070:intron | 45.0% | |
| !! | ACCCTCTTATATTGGCCTTG+AGG | + | chr5_1:2937021-2937040 | None:intergenic | 45.0% |
| !! | GTGATACTCTAAGGCCTAAG+AGG | + | chr5_1:2937127-2937146 | None:intergenic | 45.0% |
| ! | TTTTCCGAAGAGTGGAGCTT+TGG | + | chr5_1:2937376-2937395 | None:intergenic | 45.0% |
| TCCACTCTTCGGAAAACTGA+TGG | - | chr5_1:2937380-2937399 | Msa0711070:intron | 45.0% | |
| ! | ACCATCAGTTTTCCGAAGAG+TGG | + | chr5_1:2937384-2937403 | None:intergenic | 45.0% |
| ! | GAAAACTGATGGTGCAGAGA+AGG | - | chr5_1:2937391-2937410 | Msa0711070:intron | 45.0% |
| ! | GATGCAAGTTCTAACCACAG+TGG | - | chr5_1:2937586-2937605 | Msa0711070:intron | 45.0% |
| TAACCACAGTGGATGTACAG+AGG | - | chr5_1:2937597-2937616 | Msa0711070:intron | 45.0% | |
| AGTGGATGTACAGAGGTTCT+GGG | - | chr5_1:2937604-2937623 | Msa0711070:intron | 45.0% | |
| CTGGGATCAACTTCTTTCCA+AGG | - | chr5_1:2937622-2937641 | Msa0711070:intron | 45.0% | |
| TTCTTTCCAAGGGCAGTTTG+AGG | - | chr5_1:2937633-2937652 | Msa0711070:intron | 45.0% | |
| TCTTTCCAAGGGCAGTTTGA+GGG | - | chr5_1:2937634-2937653 | Msa0711070:intron | 45.0% | |
| ! | TTTTTCCCTCAAACTGCCCT+TGG | + | chr5_1:2937642-2937661 | None:intergenic | 45.0% |
| !! | GAATAACGGGTCTAATCTCC+TGG | - | chr5_1:2937666-2937685 | Msa0711070:intron | 45.0% |
| CTAATCTCCTGGAGGATGAT+AGG | - | chr5_1:2937677-2937696 | Msa0711070:intron | 45.0% | |
| AATTAGGCCTATCATCCTCC+AGG | + | chr5_1:2937687-2937706 | None:intergenic | 45.0% | |
| GCAAAAGTTGTCTCACAAGG+AGG | - | chr5_1:2938057-2938076 | Msa0711070:intron | 45.0% | |
| TGCTCTAGCAGTGAGAGATT+TGG | - | chr5_1:2938238-2938257 | Msa0711070:intron | 45.0% | |
| GCTCTAGCAGTGAGAGATTT+GGG | - | chr5_1:2938239-2938258 | Msa0711070:intron | 45.0% | |
| ! | AAACAGACTCAAAGGGGTGT+GGG | - | chr5_1:2938455-2938474 | Msa0711070:CDS | 45.0% |
| CATTGACACATGTCAGACAC+TGG | + | chr5_1:2938910-2938929 | None:intergenic | 45.0% | |
| TGGAAAACAAAAAGGGACGG+CGG | - | chr5_1:2939093-2939112 | Msa0711070:CDS | 45.0% | |
| ! | GCCAGTTCTAATGCCGAAAA+TGG | - | chr5_1:2939121-2939140 | Msa0711070:CDS | 45.0% |
| CTTCCCAAACATCAAGCTGA+AGG | - | chr5_1:2939249-2939268 | Msa0711070:intron | 45.0% | |
| ACCTGCATTCAGGAAGAAGA+AGG | - | chr5_1:2939406-2939425 | Msa0711070:CDS | 45.0% | |
| ACCTTCTTCTTCCTGAATGC+AGG | + | chr5_1:2939410-2939429 | None:intergenic | 45.0% | |
| ! | AAGAAGGTTCCAGTGGATTC+AGG | - | chr5_1:2939422-2939441 | Msa0711070:CDS | 45.0% |
| TTAACGTCTCCTGAATCCAC+TGG | + | chr5_1:2939434-2939453 | None:intergenic | 45.0% | |
| TCAGGTCTGTCCAAATGGTA+TGG | + | chr5_1:2939527-2939546 | None:intergenic | 45.0% | |
| !!! | TCATTTTTTTAAAATTTTAT+TGG | - | chr5_1:2938852-2938871 | Msa0711070:CDS | 5.0% |
| GAGAGGAAAGGGTTGAGTGT+TGG | - | chr5_1:2933713-2933732 | Msa0711070:CDS | 50.0% | |
| AAATGAATGGGGGGGTTACG+CGG | - | chr5_1:2933744-2933763 | Msa0711070:CDS | 50.0% | |
| GTTTACACTAGCGCGAAAGC+AGG | - | chr5_1:2933824-2933843 | Msa0711070:CDS | 50.0% | |
| CCATGCCTGGGTTTATTGCA+CGG | - | chr5_1:2934408-2934427 | Msa0711070:intron | 50.0% | |
| AGCTTCCGTGCAATAAACCC+AGG | + | chr5_1:2934416-2934435 | None:intergenic | 50.0% | |
| ! | ACTGGTCTCACATGTAGTGC+TGG | - | chr5_1:2934812-2934831 | Msa0711070:intron | 50.0% |
| ! | TCTCACATGTAGTGCTGGAG+TGG | - | chr5_1:2934817-2934836 | Msa0711070:intron | 50.0% |
| GACCTTTCTGATAGGAAGGG+AGG | + | chr5_1:2935597-2935616 | None:intergenic | 50.0% | |
| ! | TGTTGACAGATTGGGGGCAT+CGG | - | chr5_1:2935751-2935770 | Msa0711070:intron | 50.0% |
| AAGCACATGTGAGCAGATGC+TGG | - | chr5_1:2935813-2935832 | Msa0711070:intron | 50.0% | |
| ATGCAACAGCGCTTCATCCT+CGG | + | chr5_1:2936234-2936253 | None:intergenic | 50.0% | |
| !! | CTTTATCCACAGAGGTACCC+AGG | + | chr5_1:2936710-2936729 | None:intergenic | 50.0% |
| CTGTATCAGCGACAAAGTCG+TGG | + | chr5_1:2937265-2937284 | None:intergenic | 50.0% | |
| CTGATCTTTCCCTTGACGGT+AGG | - | chr5_1:2937288-2937307 | Msa0711070:intron | 50.0% | |
| ATCTGTGTGCCTACCGTCAA+GGG | + | chr5_1:2937300-2937319 | None:intergenic | 50.0% | |
| GAACCTCTGTACATCCACTG+TGG | + | chr5_1:2937603-2937622 | None:intergenic | 50.0% | |
| CAGTGGATGTACAGAGGTTC+TGG | - | chr5_1:2937603-2937622 | Msa0711070:intron | 50.0% | |
| ! | TAACGGGTCTAATCTCCTGG+AGG | - | chr5_1:2937669-2937688 | Msa0711070:intron | 50.0% |
| GAGCAATCCTAGCAGCTTAG+AGG | + | chr5_1:2938223-2938242 | None:intergenic | 50.0% | |
| CAAACAGACTCAAAGGGGTG+TGG | - | chr5_1:2938454-2938473 | Msa0711070:CDS | 50.0% | |
| ! | TTTGTGATGGGGATGTTGGG+CGG | - | chr5_1:2938751-2938770 | Msa0711070:intron | 50.0% |
| GTCAGACACTGGACACAACA+TGG | + | chr5_1:2938899-2938918 | None:intergenic | 50.0% | |
| ! | GCGTCTGTGACCTCCATTTT+CGG | + | chr5_1:2939137-2939156 | None:intergenic | 50.0% |
| GGTGCAATGCATGAGACTGA+CGG | + | chr5_1:2939159-2939178 | None:intergenic | 50.0% | |
| AGCTGAGGAGAATCTGCACA+AGG | - | chr5_1:2939194-2939213 | Msa0711070:intron | 50.0% | |
| GGAGAATCTGCACAAGGATG+TGG | - | chr5_1:2939200-2939219 | Msa0711070:intron | 50.0% | |
| ACAATCAACCTCCTACCTCG+AGG | - | chr5_1:2939378-2939397 | Msa0711070:CDS | 50.0% | |
| ! | GAATGCAGGTCTTTTCCTCG+AGG | + | chr5_1:2939396-2939415 | None:intergenic | 50.0% |
| CGAGGAAAAGACCTGCATTC+AGG | - | chr5_1:2939396-2939415 | Msa0711070:CDS | 50.0% | |
| CAGGAAGAAGAAGGTTCCAG+TGG | - | chr5_1:2939415-2939434 | Msa0711070:CDS | 50.0% | |
| GCTTCTCAGGTCTGTCCAAA+TGG | + | chr5_1:2939532-2939551 | None:intergenic | 50.0% | |
| ! | AGATGACAGAGCACCCTACA+AGG | - | chr5_1:2939559-2939578 | Msa0711070:exon | 50.0% |
| CACTAGCGCGAAAGCAGGAA+TGG | - | chr5_1:2933829-2933848 | Msa0711070:CDS | 55.0% | |
| AGCGCGAAAGCAGGAATGGA+AGG | - | chr5_1:2933833-2933852 | Msa0711070:CDS | 55.0% | |
| ! | GACATGGTGCCAACAGCCAT+TGG | + | chr5_1:2934258-2934277 | None:intergenic | 55.0% |
| GAGTTCGTTCTGCCATGCCT+GGG | - | chr5_1:2934396-2934415 | Msa0711070:intron | 55.0% | |
| CCGTGCAATAAACCCAGGCA+TGG | + | chr5_1:2934411-2934430 | None:intergenic | 55.0% | |
| !! | ACAGATTGGGGGCATCGGTA+AGG | - | chr5_1:2935756-2935775 | Msa0711070:intron | 55.0% |
| ! | TATTGGCCTGGGTACCTCTG+TGG | - | chr5_1:2936701-2936720 | Msa0711070:CDS | 55.0% |
| GATCTGTGTGCCTACCGTCA+AGG | + | chr5_1:2937301-2937320 | None:intergenic | 55.0% | |
| ! | GGTCTTTTCCTCGAGGTAGG+AGG | + | chr5_1:2939389-2939408 | None:intergenic | 55.0% |
| ! | GCAGGTCTTTTCCTCGAGGT+AGG | + | chr5_1:2939392-2939411 | None:intergenic | 55.0% |
| AAGGGCAGGCCAATGGCTGT+TGG | - | chr5_1:2934246-2934265 | Msa0711070:intron | 60.0% | |
| GGAGTTCGTTCTGCCATGCC+TGG | - | chr5_1:2934395-2934414 | Msa0711070:intron | 60.0% | |
| ! | GAGGACGTTTTCTGCCACCG+AGG | - | chr5_1:2936214-2936233 | Msa0711070:intron | 60.0% |
| CAACAGCGCTTCATCCTCGG+TGG | + | chr5_1:2936231-2936250 | None:intergenic | 60.0% | |
| ! | TCGGTGCTTCTGACCCTGAC+TGG | + | chr5_1:2938011-2938030 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 2933700 | 2939616 | 2933700 | ID=Msa0711070;Name=Msa0711070 |
| chr5_1 | mRNA | 2933700 | 2939616 | 2933700 | ID=Msa0711070-mRNA-1;Parent=Msa0711070;Name=Msa0711070-mRNA-1;_AED=0.18;_eAED=0.18;_QI=46|0.8|0.62|1|0.73|0.68|16|0|769 |
| chr5_1 | exon | 2933700 | 2934045 | 2933700 | ID=Msa0711070-mRNA-1:exon:1044;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2935200 | 2935304 | 2935200 | ID=Msa0711070-mRNA-1:exon:1043;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2935438 | 2935667 | 2935438 | ID=Msa0711070-mRNA-1:exon:1042;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2935698 | 2935751 | 2935698 | ID=Msa0711070-mRNA-1:exon:1041;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2935904 | 2935953 | 2935904 | ID=Msa0711070-mRNA-1:exon:1040;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2935969 | 2936184 | 2935969 | ID=Msa0711070-mRNA-1:exon:1039;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2936345 | 2936456 | 2936345 | ID=Msa0711070-mRNA-1:exon:1038;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2936676 | 2936767 | 2936676 | ID=Msa0711070-mRNA-1:exon:1037;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2937053 | 2937181 | 2937053 | ID=Msa0711070-mRNA-1:exon:1036;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2937436 | 2937556 | 2937436 | ID=Msa0711070-mRNA-1:exon:1035;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2937703 | 2937798 | 2937703 | ID=Msa0711070-mRNA-1:exon:1034;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2938454 | 2938540 | 2938454 | ID=Msa0711070-mRNA-1:exon:1033;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2938626 | 2938726 | 2938626 | ID=Msa0711070-mRNA-1:exon:1032;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2938810 | 2938933 | 2938810 | ID=Msa0711070-mRNA-1:exon:1031;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2939014 | 2939187 | 2939014 | ID=Msa0711070-mRNA-1:exon:1030;Parent=Msa0711070-mRNA-1 |
| chr5_1 | exon | 2939298 | 2939616 | 2939298 | ID=Msa0711070-mRNA-1:exon:1029;Parent=Msa0711070-mRNA-1 |
| chr5_1 | five_prime_UTR | 2939571 | 2939616 | 2939571 | ID=Msa0711070-mRNA-1:five_prime_utr;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2939298 | 2939570 | 2939298 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2939014 | 2939187 | 2939014 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2938810 | 2938933 | 2938810 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2938626 | 2938726 | 2938626 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2938454 | 2938540 | 2938454 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2937703 | 2937798 | 2937703 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2937436 | 2937556 | 2937436 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2937053 | 2937181 | 2937053 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2936676 | 2936767 | 2936676 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2936345 | 2936456 | 2936345 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2935969 | 2936184 | 2935969 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2935904 | 2935953 | 2935904 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2935698 | 2935751 | 2935698 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2935438 | 2935667 | 2935438 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2935200 | 2935304 | 2935200 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| chr5_1 | CDS | 2933700 | 2934045 | 2933700 | ID=Msa0711070-mRNA-1:cds;Parent=Msa0711070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
