AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0807140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807140 MtrunA17_Chr5g0398351 95.873 727 30 0 22 748 10 736 0.0 1429
Msa0807140 MtrunA17_Chr5g0398351 88.111 757 80 4 1 748 752 1507 0.0 1353
Msa0807140 MtrunA17_Chr5g0398401 87.054 757 88 4 1 748 1 756 0.0 1337
Msa0807140 MtrunA17_Chr5g0398241 87.037 756 88 4 1 747 1 755 0.0 1334
Msa0807140 MtrunA17_Chr5g0398331 65.075 733 242 8 21 747 28 752 0.0 938
Msa0807140 MtrunA17_Chr5g0398311 63.373 759 252 10 4 747 1 748 0.0 930
Msa0807140 MtrunA17_Chr4g0057061 57.702 766 296 14 1 747 20 776 0.0 839
Msa0807140 MtrunA17_Chr7g0262161 45.649 747 360 17 35 745 24 760 0.0 595
Msa0807140 MtrunA17_Chr2g0300751 45.881 704 339 12 74 744 77 771 0.0 575
Msa0807140 MtrunA17_Chr4g0053781 44.098 737 372 14 37 745 30 754 0.0 572
Msa0807140 MtrunA17_Chr5g0401511 43.389 779 393 18 2 748 1 763 0.0 560
Msa0807140 MtrunA17_Chr4g0070391 43.798 774 375 17 6 747 8 753 0.0 550
Msa0807140 MtrunA17_Chr4g0037221 43.132 728 362 15 60 745 50 767 0.0 549
Msa0807140 MtrunA17_Chr7g0246461 42.452 775 379 17 8 748 1 742 0.0 543
Msa0807140 MtrunA17_Chr4g0020651 42.222 765 399 17 12 748 10 759 0.0 535
Msa0807140 MtrunA17_Chr8g0344331 42.686 752 374 20 36 744 36 773 3.52e-178 529
Msa0807140 MtrunA17_Chr1g0152771 40.717 781 406 14 1 744 1 761 1.86e-177 526
Msa0807140 MtrunA17_Chr1g0204321 39.975 788 422 13 1 747 1 778 3.14e-176 524
Msa0807140 MtrunA17_Chr8g0344971 41.931 756 373 17 37 748 29 762 9.79e-167 499
Msa0807140 MtrunA17_Chr3g0120521 38.503 748 417 12 35 745 28 769 1.16e-158 478
Msa0807140 MtrunA17_Chr1g0189561 38.628 787 413 20 2 745 1 760 1.17e-157 476
Msa0807140 MtrunA17_Chr8g0345971 38.573 757 388 19 38 745 30 758 1.31e-157 475
Msa0807140 MtrunA17_Chr8g0377961 41.265 727 383 16 54 745 57 774 4.47e-157 474
Msa0807140 MtrunA17_Chr4g0057481 41.802 677 356 12 102 747 22 691 6.70e-156 469
Msa0807140 MtrunA17_Chr3g0134621 39.589 778 383 17 2 744 9 734 4.70e-155 468
Msa0807140 MtrunA17_Chr4g0076611 39.518 706 380 13 74 745 1 693 4.96e-155 467
Msa0807140 MtrunA17_Chr4g0057471 40.480 709 379 15 71 745 9 708 1.69e-153 463
Msa0807140 MtrunA17_Chr4g0057531 39.418 756 409 13 32 745 28 776 7.66e-153 464
Msa0807140 MtrunA17_Chr1g0189251 37.949 751 396 19 38 745 30 753 7.46e-152 461
Msa0807140 MtrunA17_Chr7g0276151 39.187 763 383 20 31 745 26 755 6.75e-151 458
Msa0807140 MtrunA17_Chr8g0345991 38.064 754 392 19 38 745 29 753 1.07e-149 455
Msa0807140 MtrunA17_Chr8g0345981 37.101 752 406 18 38 745 29 757 2.25e-148 452
Msa0807140 MtrunA17_Chr7g0248871 36.796 799 406 26 4 745 7 763 1.40e-145 444
Msa0807140 MtrunA17_Chr8g0369891 39.311 697 379 15 75 745 74 752 3.67e-145 443
Msa0807140 MtrunA17_Chr5g0407701 39.885 697 377 17 75 745 69 749 1.10e-144 442
Msa0807140 MtrunA17_Chr8g0354771 38.349 751 407 17 38 745 26 763 1.13e-142 437
Msa0807140 MtrunA17_Chr7g0266051 39.377 706 370 23 71 748 32 707 2.49e-141 432
Msa0807140 MtrunA17_Chr8g0351011 38.407 703 374 18 71 745 80 751 7.16e-140 429
Msa0807140 MtrunA17_Chr4g0057511 41.357 619 329 11 156 747 6 617 8.17e-139 422
Msa0807140 MtrunA17_Chr5g0423261 40.764 628 338 12 148 747 2 623 8.99e-139 422
Msa0807140 MtrunA17_Chr2g0285111 36.340 776 419 16 34 748 27 788 1.60e-138 427
Msa0807140 MtrunA17_Chr2g0303881 37.618 739 382 19 57 745 16 725 2.46e-138 424
Msa0807140 MtrunA17_Chr4g0057491 40.351 627 340 12 149 747 3 623 2.66e-137 418
Msa0807140 MtrunA17_Chr2g0285121 37.051 780 408 19 34 748 24 785 9.91e-137 422
Msa0807140 MtrunA17_Chr7g0246451 37.535 706 381 20 71 748 74 747 5.34e-136 419
Msa0807140 MtrunA17_Chr8g0345961 36.943 785 415 20 6 745 7 756 3.44e-135 417
Msa0807140 MtrunA17_Chr3g0136151 39.577 710 381 21 70 742 60 758 1.91e-134 416
Msa0807140 MtrunA17_Chr7g0250481 38.223 743 380 24 71 748 72 800 2.06e-133 414
Msa0807140 MtrunA17_Chr4g0026641 37.962 785 412 25 4 745 1 753 7.74e-133 411
Msa0807140 MtrunA17_Chr8g0354741 40.160 625 340 12 143 745 21 633 5.65e-132 405
Msa0807140 MtrunA17_Chr6g0470881 36.005 786 405 24 1 745 1 729 4.68e-130 403
Msa0807140 MtrunA17_Chr6g0470851 35.842 784 409 24 1 745 1 729 7.34e-129 400
Msa0807140 MtrunA17_Chr4g0057461 39.117 634 341 15 149 745 3 628 1.26e-128 396
Msa0807140 MtrunA17_Chr1g0170081 35.762 755 438 20 6 745 8 730 7.81e-128 397
Msa0807140 MtrunA17_Chr8g0334521 35.954 776 420 24 1 745 4 733 1.36e-127 397
Msa0807140 MtrunA17_Chr1g0146251 36.304 763 427 22 6 745 8 734 9.22e-127 395
Msa0807140 MtrunA17_Chr3g0143251 36.200 779 435 21 6 745 9 764 1.92e-126 395
Msa0807140 MtrunA17_Chr7g0250371 38.345 725 390 24 71 748 73 787 1.15e-125 393
Msa0807140 MtrunA17_Chr1g0146271 36.435 763 424 21 6 745 8 732 2.19e-125 391
Msa0807140 MtrunA17_Chr3g0079971 35.995 764 415 22 6 740 8 726 2.72e-125 391
Msa0807140 MtrunA17_Chr7g0250411 36.611 773 423 23 28 745 23 783 2.72e-124 390
Msa0807140 MtrunA17_Chr8g0334491 37.032 694 384 18 71 745 68 727 2.54e-122 383
Msa0807140 MtrunA17_Chr7g0227991 35.931 693 401 15 71 748 72 736 3.02e-122 383
Msa0807140 MtrunA17_Chr7g0250391 37.431 724 397 23 71 748 72 785 6.05e-119 375
Msa0807140 MtrunA17_Chr7g0250331 36.207 812 429 28 15 748 9 809 4.27e-115 366
Msa0807140 MtrunA17_Chr7g0248861 38.325 621 315 19 30 602 22 622 1.07e-110 356
Msa0807140 MtrunA17_Chr7g0248861 47.458 236 106 6 130 350 627 859 5.83e-49 185
Msa0807140 MtrunA17_Chr6g0480721 34.738 688 335 18 78 747 9 600 2.96e-110 348
Msa0807140 MtrunA17_Chr8g0376841 39.662 532 267 15 71 569 75 585 6.69e-105 333
Msa0807140 MtrunA17_Chr5g0439271 38.840 569 314 12 206 746 40 602 4.61e-104 331
Msa0807140 MtrunA17_Chr4g0071871 33.738 741 404 24 73 743 88 811 8.75e-97 318
Msa0807140 MtrunA17_Chr2g0298601 34.605 734 403 25 75 743 90 811 9.25e-93 307
Msa0807140 MtrunA17_Chr2g0302951 32.842 746 423 21 71 748 106 841 4.67e-92 306
Msa0807140 MtrunA17_Chr5g0447171 37.182 511 269 9 284 748 6 510 1.87e-89 290
Msa0807140 MtrunA17_Chr8g0380961 32.283 762 428 26 60 748 102 848 1.50e-86 291
Msa0807140 MtrunA17_Chr2g0301011 36.044 541 274 14 103 632 4 483 1.74e-85 279
Msa0807140 MtrunA17_Chr4g0075331 30.360 751 413 23 77 746 17 738 8.32e-77 262
Msa0807140 MtrunA17_Chr3g0143241 35.524 487 261 16 6 462 8 471 3.72e-65 226
Msa0807140 MtrunA17_Chr7g0261691 37.719 342 193 6 139 462 7 346 4.87e-64 217
Msa0807140 MtrunA17_Chr4g0035881 39.410 373 154 9 210 567 4 319 6.24e-64 216
Msa0807140 MtrunA17_Chr7g0261701 40.809 272 146 4 481 745 26 289 5.90e-58 199
Msa0807140 MtrunA17_Chr7g0250461 33.407 452 266 12 28 445 23 473 1.38e-57 204
Msa0807140 MtrunA17_Chr3g0097061 37.908 306 173 8 103 401 4 299 1.20e-54 194
Msa0807140 MtrunA17_Chr3g0097061 52.381 105 43 1 526 630 332 429 4.47e-24 105
Msa0807140 MtrunA17_Chr7g0250441 44.912 285 130 10 477 745 9 282 1.02e-53 188
Msa0807140 MtrunA17_Chr8g0346361 39.672 305 156 9 455 745 206 496 2.29e-53 192
Msa0807140 MtrunA17_Chr8g0346361 41.315 213 120 3 164 374 6 215 3.72e-41 157
Msa0807140 MtrunA17_Chr4g0026651 39.441 322 131 13 89 355 2 314 2.60e-51 181
Msa0807140 MtrunA17_Chr4g0026661 41.634 257 130 7 500 745 12 259 1.98e-49 174
Msa0807140 MtrunA17_Chr2g0301911 33.523 352 203 8 162 503 30 360 1.54e-48 176
Msa0807140 MtrunA17_Chr3g0103071 38.846 260 155 4 259 515 1 259 8.75e-46 165
Msa0807140 MtrunA17_Chr3g0105461 35.955 356 169 10 6 346 8 319 1.55e-45 166
Msa0807140 MtrunA17_Chr2g0301031 41.016 256 131 6 500 745 1 246 1.35e-44 160
Msa0807140 MtrunA17_Chr2g0312861 39.453 256 135 6 500 745 1 246 8.30e-44 160
Msa0807140 MtrunA17_Chr5g0398341 72.165 97 27 0 534 630 1 97 5.90e-41 145
Msa0807140 MtrunA17_Chr3g0105451 36.140 285 148 7 474 742 9 275 5.08e-40 149
Msa0807140 MtrunA17_Chr4g0071191 35.317 252 133 6 435 671 14 250 1.39e-39 146
Msa0807140 MtrunA17_Chr2g0312841 41.714 175 99 2 164 337 11 183 1.08e-38 142
Msa0807140 MtrunA17_Chr2g0301921 40.741 216 113 6 534 745 1 205 1.90e-36 136
Msa0807140 MtrunA17_Chr3g0103061 38.660 194 99 4 71 247 69 259 4.47e-31 122
Msa0807140 MtrunA17_Chr5g0418921 48.201 139 53 4 471 595 3 136 7.80e-28 110
Msa0807140 MtrunA17_Chr5g0436021 41.818 165 79 5 183 337 30 187 1.80e-27 110
Msa0807140 MtrunA17_Chr3g0142981 43.137 153 53 3 202 349 51 174 4.26e-25 103
Msa0807140 MtrunA17_Chr5g0436031 33.333 165 100 3 587 747 23 181 1.86e-21 93.6
Msa0807140 MtrunA17_Chr2g0301021 25.115 434 212 12 9 430 16 348 1.48e-20 94.4
Msa0807140 MtrunA17_Chr3g0143231 55.682 88 33 1 484 565 2 89 5.07e-20 85.5
Msa0807140 MtrunA17_Chr8g0376851 28.161 174 117 3 577 745 1 171 2.23e-19 86.3
Msa0807140 MtrunA17_Chr7g0248851 34.211 152 86 5 601 745 2 146 2.44e-18 82.8
Msa0807140 MtrunA17_Chr3g0142971 53.571 84 33 1 484 561 2 85 3.61e-18 80.1
Msa0807140 MtrunA17_Chr3g0103081 34.694 147 88 5 601 745 2 142 1.41e-17 80.1
Msa0807140 MtrunA17_Chr5g0439281 31.551 187 107 4 2 174 1 180 7.68e-17 79.7
Msa0807140 MtrunA17_Chr3g0143021 38.835 103 62 1 72 173 4 106 3.39e-15 72.4
Msa0807140 MtrunA17_Chr3g0143011 55.357 56 25 0 298 353 2 57 1.06e-12 63.9
Msa0807140 MtrunA17_Chr4g0057501 34.375 128 73 2 34 150 3 130 1.30e-11 62.8
Msa0807140 MtrunA17_Chr3g0077671 70.000 40 12 0 526 565 238 277 1.51e-11 66.2
Msa0807140 MtrunA17_Chr5g0434941 46.667 75 34 2 264 333 1 74 1.72e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807140 AT1G04110.1 43.333 780 385 18 14 748 6 773 0.0 580
Msa0807140 AT5G67360.1 43.484 775 384 17 4 745 1 754 0.0 578
Msa0807140 AT2G05920.1 44.550 734 367 15 37 744 29 748 0.0 558
Msa0807140 AT3G14067.1 42.513 748 383 15 35 745 30 767 0.0 556
Msa0807140 AT3G14240.1 42.610 751 387 15 37 748 27 772 0.0 548
Msa0807140 AT4G34980.1 42.091 727 370 13 57 745 45 758 0.0 543
Msa0807140 AT1G01900.1 41.733 750 381 17 37 748 43 774 1.49e-170 509
Msa0807140 AT5G51750.1 39.175 776 422 15 12 747 11 776 1.52e-167 502
Msa0807140 AT2G04160.1 38.933 750 407 14 37 745 31 770 8.64e-155 469
Msa0807140 AT5G59810.1 38.389 745 412 14 37 745 41 774 1.25e-153 466
Msa0807140 AT5G03620.1 38.693 796 404 28 1 748 1 760 2.82e-145 444
Msa0807140 AT5G45650.2 38.760 774 396 18 38 745 27 788 1.74e-144 443
Msa0807140 AT5G45650.1 38.760 774 396 18 38 745 27 788 1.74e-144 443
Msa0807140 AT5G59090.3 40.029 692 363 19 73 745 68 726 1.81e-144 441
Msa0807140 AT5G67090.1 36.623 770 402 20 4 738 1 719 4.32e-144 440
Msa0807140 AT5G59090.1 39.971 693 364 19 73 745 68 728 8.48e-144 439
Msa0807140 AT5G59090.2 39.827 693 360 19 73 745 68 723 3.08e-143 437
Msa0807140 AT1G32940.1 39.247 744 405 18 38 745 30 762 3.47e-140 431
Msa0807140 AT5G59100.1 37.861 692 391 17 71 745 68 737 2.58e-139 428
Msa0807140 AT1G32940.4 39.777 719 387 17 62 745 4 711 1.19e-138 426
Msa0807140 AT1G32940.2 39.777 719 387 17 62 745 4 711 1.19e-138 426
Msa0807140 AT5G59120.1 39.311 697 363 18 73 745 67 727 1.22e-138 426
Msa0807140 AT4G10520.1 37.451 769 420 20 6 745 8 744 6.53e-137 422
Msa0807140 AT4G10550.1 36.585 779 441 17 3 745 5 766 1.36e-136 422
Msa0807140 AT4G10540.1 38.243 774 424 18 9 745 7 763 3.16e-136 421
Msa0807140 AT4G10550.3 37.634 744 416 16 38 745 51 782 2.32e-135 419
Msa0807140 AT1G32960.1 38.255 745 411 18 38 745 33 765 2.37e-135 419
Msa0807140 AT4G10550.4 38.451 710 390 15 71 745 13 710 3.94e-135 416
Msa0807140 AT4G10550.2 38.451 710 390 15 71 745 13 710 3.94e-135 416
Msa0807140 AT3G46840.1 36.751 751 435 17 9 745 10 734 7.39e-135 416
Msa0807140 AT3G46850.1 36.485 751 438 16 9 745 9 734 3.25e-134 414
Msa0807140 AT5G58840.1 36.807 758 397 22 9 745 10 706 1.45e-132 409
Msa0807140 AT4G00230.1 37.941 709 370 18 71 745 71 743 1.50e-132 410
Msa0807140 AT1G20160.1 36.457 779 432 25 6 745 7 761 8.16e-132 409
Msa0807140 AT4G10510.1 38.606 746 411 15 35 745 20 753 8.32e-132 409
Msa0807140 AT1G32950.1 37.532 786 421 21 2 745 4 761 8.80e-132 409
Msa0807140 AT4G10510.2 39.802 706 379 14 74 745 1 694 1.16e-131 407
Msa0807140 AT4G10510.3 38.627 743 409 15 38 745 35 765 1.51e-131 409
Msa0807140 AT1G20160.2 38.451 710 384 22 74 745 28 722 1.60e-131 407
Msa0807140 AT4G10510.4 39.660 706 380 14 74 745 16 709 1.63e-131 407
Msa0807140 AT4G21630.1 36.849 787 409 20 6 745 8 753 2.01e-131 408
Msa0807140 AT5G59130.4 36.170 752 422 18 12 745 14 725 7.38e-131 405
Msa0807140 AT5G59190.1 38.650 652 358 15 74 710 32 656 1.19e-130 404
Msa0807140 AT5G59130.3 37.627 691 377 17 73 745 32 686 1.43e-130 404
Msa0807140 AT1G32950.2 39.496 714 375 18 72 745 14 710 2.18e-130 404
Msa0807140 AT5G59130.2 36.193 746 420 18 12 745 14 715 2.46e-130 404
Msa0807140 AT1G66220.1 35.891 769 433 17 7 748 12 747 4.78e-130 404
Msa0807140 AT5G59130.1 35.925 746 428 17 12 745 14 721 8.08e-130 403
Msa0807140 AT4G10530.1 36.835 771 400 23 13 745 14 735 1.78e-129 402
Msa0807140 AT1G20150.1 37.187 718 391 19 78 748 69 773 1.45e-128 401
Msa0807140 AT5G58830.1 37.791 688 362 20 73 745 69 705 1.23e-127 396
Msa0807140 AT5G58820.1 37.645 688 362 19 73 745 65 700 3.25e-124 387
Msa0807140 AT1G66210.1 36.702 752 390 23 38 745 41 750 9.22e-124 388
Msa0807140 AT4G21650.1 36.632 778 399 22 19 745 26 760 1.38e-123 387
Msa0807140 AT5G03620.2 42.097 601 290 20 1 567 1 577 1.27e-122 379
Msa0807140 AT5G11940.1 35.684 709 392 14 72 745 73 752 1.50e-119 377
Msa0807140 AT4G21640.1 35.257 797 384 23 3 745 9 727 2.23e-119 375
Msa0807140 AT5G45640.1 36.842 741 387 23 71 745 26 751 5.74e-116 367
Msa0807140 AT4G26330.2 35.131 723 406 21 71 747 18 723 2.89e-115 365
Msa0807140 AT4G21326.1 35.443 711 393 18 71 748 13 690 3.28e-113 358
Msa0807140 AT4G26330.1 34.464 737 406 22 71 747 18 737 2.32e-111 355
Msa0807140 AT4G15040.2 36.127 692 389 18 71 745 30 685 2.35e-111 353
Msa0807140 AT4G15040.1 36.127 692 389 18 71 745 30 685 2.35e-111 353
Msa0807140 AT4G21323.1 35.785 707 392 21 72 745 116 793 9.63e-108 347
Msa0807140 AT1G32970.1 36.982 676 350 19 110 745 83 722 2.40e-106 342
Msa0807140 AT4G00230.2 40.454 529 262 13 71 571 71 574 1.26e-104 333
Msa0807140 AT1G32940.3 39.716 564 299 15 38 567 30 586 1.21e-103 330
Msa0807140 AT5G58840.3 37.413 572 293 15 9 565 10 531 7.08e-100 319
Msa0807140 AT5G44530.1 32.353 782 427 28 44 748 80 836 4.38e-94 311
Msa0807140 AT2G19170.1 33.288 742 407 23 73 743 84 808 1.06e-93 310
Msa0807140 AT2G19170.2 33.288 742 407 23 73 743 84 808 1.06e-93 310
Msa0807140 AT1G30600.1 31.684 849 456 30 4 748 1 829 2.95e-93 309
Msa0807140 AT4G30020.3 33.513 743 405 26 73 743 84 809 9.28e-93 307
Msa0807140 AT4G30020.1 33.513 743 405 26 73 743 84 809 9.28e-93 307
Msa0807140 AT4G30020.4 33.513 743 405 26 73 743 84 809 9.28e-93 307
Msa0807140 AT4G30020.2 33.513 743 405 26 73 743 84 809 9.28e-93 307
Msa0807140 AT5G44530.2 31.599 807 425 30 44 748 80 861 7.70e-90 301
Msa0807140 AT2G39850.1 31.781 730 411 27 74 745 65 765 1.68e-89 298
Msa0807140 AT4G20430.3 30.965 746 430 25 75 748 119 851 8.25e-87 292
Msa0807140 AT4G20430.1 30.965 746 430 25 75 748 119 851 8.25e-87 292
Msa0807140 AT4G20430.2 30.969 733 423 23 75 748 119 827 3.40e-86 290
Msa0807140 AT1G20160.3 35.838 519 293 15 6 501 7 508 8.50e-78 260
Msa0807140 AT1G62340.1 30.182 825 477 30 9 745 16 829 5.46e-74 257
Msa0807140 AT5G58840.2 35.329 501 266 14 9 501 10 460 1.74e-72 244
Msa0807140 AT5G44530.3 31.963 535 286 20 44 516 80 598 4.29e-56 203
Msa0807140 AT1G32980.1 45.161 186 95 4 530 711 3 185 1.63e-38 142
Msa0807140 AT5G59110.1 36.585 164 94 4 590 747 8 167 2.21e-23 98.2

Find 160 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTAAATCAATGTTCTTTA+AGG 0.049744 5_3:+27943335 None:intergenic
CCTTCTTTCTCAGTATTATT+GGG 0.168853 5_3:-27942547 Msa0807140:CDS
TCCTTCTTTCTCAGTATTAT+TGG 0.192447 5_3:-27942548 Msa0807140:CDS
TGTAATTCAAGGGTCCTTTC+AGG 0.248811 5_3:+27944176 None:intergenic
CTTTCACTTTCACTTGGTTT+AGG 0.248936 5_3:-27943681 Msa0807140:CDS
CTTGGAAAAGGTGTCATAAT+TGG 0.265555 5_3:-27944089 Msa0807140:CDS
AACTCACACTCCAACTTTCT+TGG 0.265934 5_3:-27944150 Msa0807140:CDS
TGAAGAGATTTGGCTTCTTC+TGG 0.277617 5_3:+27944227 None:intergenic
CCGGGATCGTTTGCTTTAAC+AGG 0.281131 5_3:+27942712 None:intergenic
ATATTCAAAGGAACAGTAAT+TGG 0.284575 5_3:-27943090 Msa0807140:CDS
ACCTTTCGCTTGAAGAGATT+TGG 0.292709 5_3:+27944217 None:intergenic
TGTTCCTTATCTATGTGGTT+TGG 0.297048 5_3:-27942659 Msa0807140:CDS
GTTCCTTATCTATGTGGTTT+GGG 0.298257 5_3:-27942658 Msa0807140:CDS
TAAGAATTCCTGGACTTTCT+TGG 0.302980 5_3:+27943019 None:intergenic
GGATAATTCAATTGTGCTTC+TGG 0.304070 5_3:+27942568 None:intergenic
TATATTGCTAAGTGAGCATT+AGG 0.307153 5_3:+27943789 None:intergenic
TGCCGCCACCACCTGCAAAA+TGG 0.312039 5_3:-27944013 Msa0807140:CDS
TATCCAGGTTCATTTGGATA+TGG 0.319334 5_3:-27943396 Msa0807140:CDS
AGGACAAGAAGTTGTAAATT+CGG 0.328307 5_3:-27943265 Msa0807140:CDS
CTTGAAGTACCTTTGGCTTT+GGG 0.329870 5_3:-27942454 Msa0807140:CDS
TCGCTCAGGGCTCTCTCACT+TGG 0.337147 5_3:-27942324 Msa0807140:CDS
ATGTCTGGTTTAAGAATTCC+TGG 0.338531 5_3:+27943009 None:intergenic
CTTGTGTATCCAGGTTCATT+TGG 0.342215 5_3:-27943402 Msa0807140:CDS
CAATGTTGCTGTTGGATTGT+AGG 0.352832 5_3:+27943113 None:intergenic
CCTTGGCGGGATTCCTATAC+TGG 0.353306 5_3:-27942788 Msa0807140:CDS
AATCAGAAGATTTGCATAGT+TGG 0.366643 5_3:-27944343 Msa0807140:CDS
ATAGCGGCTGGCGACCAATC+AGG 0.369574 5_3:+27942847 None:intergenic
GCAAAAGCACCAATTGCAAT+TGG 0.372818 5_3:+27943636 None:intergenic
AGTTGAACTTGAAGTACCTT+TGG 0.373834 5_3:-27942461 Msa0807140:CDS
ATTCCTGGACTTTCTTGGCT+TGG 0.380426 5_3:+27943024 None:intergenic
TTAAAGAACATTGATTTAAG+TGG 0.381936 5_3:-27943333 Msa0807140:CDS
ACTTGAAGTACCTTTGGCTT+TGG 0.383368 5_3:-27942455 Msa0807140:CDS
CGCTCAGGGCTCTCTCACTT+GGG 0.391742 5_3:-27942323 Msa0807140:CDS
AATTGTTGAGAAAAGTCTTT+GGG 0.393026 5_3:+27943432 None:intergenic
ACTCACACTCCAACTTTCTT+GGG 0.400506 5_3:-27944149 Msa0807140:CDS
TAATTGTTGAGAAAAGTCTT+TGG 0.406108 5_3:+27943431 None:intergenic
TCAAAAGTTCTCACCCTGAT+TGG 0.411956 5_3:-27942861 Msa0807140:CDS
ACCAGAACATTGACTAATGT+TGG 0.414807 5_3:-27942505 Msa0807140:CDS
CCCAACATTAGTCAATGTTC+TGG 0.415340 5_3:+27942504 None:intergenic
AAAGTGTGTAATGACAAAAT+TGG 0.426324 5_3:-27943765 Msa0807140:CDS
ACAAGGACTGATTCTGTGCT+TGG 0.426836 5_3:+27943370 None:intergenic
AAGGATCCAAGGAGCTTCAT+TGG 0.426872 5_3:+27943545 None:intergenic
AGATAAGGAACATAATCTTC+TGG 0.433786 5_3:+27942670 None:intergenic
TGAATTTATACCACAAAGAA+AGG 0.436846 5_3:-27942368 Msa0807140:CDS
TTTGAAGACCCAATTGCAAT+TGG 0.438577 5_3:-27943645 Msa0807140:CDS
TCAATGTTCTTTAAGGATCC+TGG 0.440629 5_3:+27943342 None:intergenic
CTTGCAAACTCAAAAGCACT+TGG 0.445742 5_3:-27943225 Msa0807140:CDS
AAGGAATCAAACTTTCGCTC+AGG 0.446414 5_3:-27942338 Msa0807140:CDS
CCATTTGAGAACTTCTTCCA+TGG 0.446599 5_3:-27943900 Msa0807140:CDS
GCAATTGGGTCTTCAAAGAA+TGG 0.453919 5_3:+27943651 None:intergenic
TTGAATATCAATGTTGCTGT+TGG 0.454407 5_3:+27943105 None:intergenic
ACACCAGGACCGATGATGTC+TGG 0.454970 5_3:+27942994 None:intergenic
TCTTACCGCAAAGTAGCCTC+TGG 0.458063 5_3:-27944269 Msa0807140:CDS
CCAGAACATTGACTAATGTT+GGG 0.458885 5_3:-27942504 Msa0807140:CDS
CGGCAGCGGTGTGTGTTCCA+TGG 0.467665 5_3:+27943883 None:intergenic
ATTCCAAATCATGATGAAGA+TGG 0.468472 5_3:-27944507 None:intergenic
GCATCAGCAAAGCTAGGAAA+TGG 0.468791 5_3:-27943486 Msa0807140:CDS
CTCTCTCCAATGAAGCTCCT+TGG 0.469621 5_3:-27943551 Msa0807140:CDS
TGTTTCAGACCCAAGAAAGT+TGG 0.472624 5_3:+27944140 None:intergenic
CATTGAAAGATGGATGTAAA+GGG 0.473350 5_3:+27944045 None:intergenic
GTATGCAACAATAAACTCAT+AGG 0.473737 5_3:-27943960 Msa0807140:CDS
AGTTGCTCTGCTGCAAACTC+TGG 0.483255 5_3:-27943588 Msa0807140:CDS
TCTTCCTGCAGCCTCGGCAG+CGG 0.484108 5_3:+27943869 None:intergenic
GGACAAGAAGTTGTAAATTC+GGG 0.485824 5_3:-27943264 Msa0807140:CDS
CCATGGAAGAAGTTCTCAAA+TGG 0.489458 5_3:+27943900 None:intergenic
CTTCTTTCTCAGTATTATTG+GGG 0.493408 5_3:-27942546 Msa0807140:CDS
CTAATACTCTAAACCTTGGC+GGG 0.493768 5_3:-27942801 Msa0807140:CDS
CCCAATAATACTGAGAAAGA+AGG 0.494365 5_3:+27942547 None:intergenic
CAAAAGCACCAATTGCAATT+GGG 0.494429 5_3:+27943637 None:intergenic
TTGAATATCATAAACAAGAC+CGG 0.495403 5_3:+27942693 None:intergenic
AATCAGTCCTTGTGTTTACC+AGG 0.497906 5_3:-27943360 Msa0807140:CDS
TTATTGCCACTTGTGTATCC+AGG 0.499783 5_3:-27943411 Msa0807140:CDS
GTTGAGAAAAGTCTTTGGGT+TGG 0.500305 5_3:+27943436 None:intergenic
CATATCAATGTTGGCTGCAG+AGG 0.503595 5_3:-27944444 Msa0807140:CDS
TCAGTGAATGTTATTTCACT+TGG 0.504064 5_3:+27942418 None:intergenic
GCCAAGGTTTAGAGTATTAG+CGG 0.506380 5_3:+27942804 None:intergenic
CCAGAAATAATGTCAAAAGC+TGG 0.510416 5_3:+27942928 None:intergenic
AAACCAGACATCATCGGTCC+TGG 0.512088 5_3:-27942997 Msa0807140:CDS
ATCAATTGTGCTGGCACCAA+CGG 0.512655 5_3:+27943521 None:intergenic
TGTGAGGAAAAGTTTGTGGA+AGG 0.515063 5_3:+27944309 None:intergenic
TCTTTGTGAGGAAAAGTTTG+TGG 0.517275 5_3:+27944305 None:intergenic
AAAAGCCTTTGATCCAGTAT+AGG 0.517334 5_3:+27942775 None:intergenic
TCATTGAAAGATGGATGTAA+AGG 0.517381 5_3:+27944044 None:intergenic
TATGAATCTTCCTGCAGCCT+CGG 0.517777 5_3:+27943863 None:intergenic
TCTGCTGCAAACTCTGGTCC+TGG 0.523412 5_3:-27943582 Msa0807140:CDS
AAAACCATTCTTTCTTTGTG+AGG 0.524993 5_3:+27944293 None:intergenic
GAAAGGCCATTGTGAATTCA+CGG 0.526312 5_3:-27943991 Msa0807140:CDS
GATGTTCTTTCACTTTCACT+TGG 0.529353 5_3:-27943687 Msa0807140:CDS
AAAGTAGTGCTGTGTGATGT+AGG 0.529593 5_3:-27943309 Msa0807140:CDS
GATTATGTTCCTTATCTATG+TGG 0.530409 5_3:-27942664 Msa0807140:CDS
TTGGAGAGAGTGCTATATCC+AGG 0.531113 5_3:+27943564 None:intergenic
TGTGAGTTGTGTGTAATTCA+AGG 0.532838 5_3:+27944165 None:intergenic
TGTCTGATAAACATGCTGTT+AGG 0.536213 5_3:-27942300 Msa0807140:CDS
GGACCAAGCCAAGAAAGTCC+AGG 0.539803 5_3:-27943027 Msa0807140:CDS
AGCGATGATAACCTTGGAAA+AGG 0.541813 5_3:-27944101 Msa0807140:CDS
TTGTGCTGGCACCAACGGTA+AGG 0.544386 5_3:+27943526 None:intergenic
ACAGCAACATTGATATTCAA+AGG 0.548470 5_3:-27943102 Msa0807140:CDS
TGAAACAAGGACAAGGATTG+TGG 0.550041 5_3:-27944124 Msa0807140:CDS
CAAATCCAGAGGCTACTTTG+CGG 0.550052 5_3:+27944264 None:intergenic
AAGTTTGTGGAAGGAATGAA+TGG 0.550124 5_3:+27944318 None:intergenic
ATTCCTTCGTCATTGAAAGA+TGG 0.552371 5_3:+27944035 None:intergenic
TTTCCATATCCAAATGAACC+TGG 0.553708 5_3:+27943393 None:intergenic
TGCTGCATAACATGAAAATG+AGG 0.554619 5_3:+27944465 None:intergenic
TAGCGGCTGGCGACCAATCA+GGG 0.554928 5_3:+27942848 None:intergenic
ACTTTCTTGGGTCTGAAACA+AGG 0.556038 5_3:-27944137 Msa0807140:CDS
ACCGCTAATACTCTAAACCT+TGG 0.556771 5_3:-27942805 Msa0807140:CDS
TGGAACACACACCGCTGCCG+AGG 0.557292 5_3:-27943880 Msa0807140:CDS
ATTGTAGCATCAGCAAAGCT+AGG 0.558116 5_3:-27943492 Msa0807140:CDS
TAAAGGTGTAGCAGCAGGAA+TGG 0.559191 5_3:-27943814 Msa0807140:CDS
AATGCTAAAGGTGTAGCAGC+AGG 0.559203 5_3:-27943819 Msa0807140:CDS
TAACCCAAACCACATAGATA+AGG 0.560041 5_3:+27942655 None:intergenic
ACATAACTCACTTCAACTGC+AGG 0.560419 5_3:+27943171 None:intergenic
CCTGTTAAAGCAAACGATCC+CGG 0.560667 5_3:-27942712 Msa0807140:CDS
CATCCATCTTTCAATGACGA+AGG 0.565510 5_3:-27944038 Msa0807140:CDS
GCTAATACTCTAAACCTTGG+CGG 0.566763 5_3:-27942802 Msa0807140:CDS
AAGTGCTATCTTAGCTGCAA+TGG 0.566976 5_3:-27943733 Msa0807140:CDS
AGGAATCAAACTTTCGCTCA+GGG 0.567302 5_3:-27942337 Msa0807140:CDS
ATGTCTTGTCCTCACCTAAG+TGG 0.567792 5_3:-27942898 Msa0807140:CDS
GCCAAATCTCTTCAAGCGAA+AGG 0.568492 5_3:-27944218 Msa0807140:CDS
TGTCAACATTCTAGCTGCGT+GGG 0.576104 5_3:-27942974 Msa0807140:CDS
GTGTCAACATTCTAGCTGCG+TGG 0.576219 5_3:-27942975 Msa0807140:CDS
AGATTGAAGTTATTGTTCAG+TGG 0.577992 5_3:-27942621 Msa0807140:CDS
CCACCACCTGCAAAATGGAA+AGG 0.578029 5_3:-27944008 Msa0807140:CDS
GTTGAAGTGAGTTATGTAGC+TGG 0.580151 5_3:-27943165 Msa0807140:CDS
GCACCAACGGTAAGGATCCA+AGG 0.581358 5_3:+27943534 None:intergenic
GCTCCTTGGATCCTTACCGT+TGG 0.585586 5_3:-27943537 Msa0807140:CDS
AATGTCTCAAGTATTGTGAA+AGG 0.585598 5_3:-27943285 Msa0807140:CDS
CCAGTAGCGAAAATATCAGC+CGG 0.595288 5_3:+27942751 None:intergenic
GGAAATGGTGAAGAATATGA+AGG 0.595715 5_3:-27943471 Msa0807140:CDS
GAAGAAAATGAAACAACAGA+AGG 0.598818 5_3:+27943054 None:intergenic
TCAATGCAGCAATACCACTT+AGG 0.599841 5_3:+27942884 None:intergenic
GTTATGCAGCATATCAATGT+TGG 0.600953 5_3:-27944453 Msa0807140:CDS
CACAAAGAAAGGAAAACAGA+AGG 0.605378 5_3:-27942357 Msa0807140:CDS
AAAGGCCATTGTGAATTCAC+GGG 0.605512 5_3:-27943990 Msa0807140:CDS
ACTCATAGGTGCAAGAAACA+TGG 0.608057 5_3:-27943946 Msa0807140:CDS
CATAATTGGTATCATAGACA+CGG 0.608090 5_3:-27944075 Msa0807140:CDS
GGATTCCTATACTGGATCAA+AGG 0.608971 5_3:-27942780 Msa0807140:CDS
TGAATATCATAAACAAGACC+GGG 0.612270 5_3:+27942694 None:intergenic
TTGTGTCAGCAAGACCTGAA+AGG 0.617538 5_3:-27944190 Msa0807140:CDS
ATTCTTAAACCAGACATCAT+CGG 0.619928 5_3:-27943003 Msa0807140:CDS
ATGGATATAGCTATTGAAGA+TGG 0.620006 5_3:-27943714 Msa0807140:CDS
GCCATTGTGAATTCACGGGA+GGG 0.623871 5_3:-27943986 Msa0807140:CDS
TTGTGGAGCGATGATAACCT+TGG 0.627357 5_3:-27944107 Msa0807140:CDS
TGGAAGAAGTTCTCAAATGG+AGG 0.628098 5_3:+27943903 None:intergenic
GGCCATTGTGAATTCACGGG+AGG 0.631960 5_3:-27943987 Msa0807140:CDS
GTGAGTTGTGTGTAATTCAA+GGG 0.636834 5_3:+27944166 None:intergenic
CCAGTATAGGAATCCCGCCA+AGG 0.642912 5_3:+27942788 None:intergenic
ATTCACTGAGGTCAATGAGA+GGG 0.649647 5_3:-27942404 Msa0807140:CDS
ACACTCATACCCAAAGCCAA+AGG 0.650995 5_3:+27942445 None:intergenic
CATTCACTGAGGTCAATGAG+AGG 0.651316 5_3:-27942405 Msa0807140:CDS
ATAATTGGTATCATAGACAC+GGG 0.652269 5_3:-27944074 Msa0807140:CDS
TTGGGTCTGAAACAAGGACA+AGG 0.652454 5_3:-27944131 Msa0807140:CDS
CAAGAAGTTGTAAATTCGGG+TGG 0.653024 5_3:-27943261 Msa0807140:CDS
AATGAACCTGGATACACAAG+TGG 0.660659 5_3:+27943405 None:intergenic
GCAGCTAGAATGTTGACACC+AGG 0.666478 5_3:+27942979 None:intergenic
GCCCTCCCGTGAATTCACAA+TGG 0.677287 5_3:+27943985 None:intergenic
TAAGGATCCTGGTAAACACA+AGG 0.684953 5_3:+27943353 None:intergenic
GCAGCAATACCACTTAGGTG+AGG 0.726862 5_3:+27942889 None:intergenic
TAGCTTCACAGCAAATCCAG+AGG 0.735330 5_3:+27944253 None:intergenic
AAGTGAAATAACATTCACTG+AGG 0.762588 5_3:-27942416 Msa0807140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTAAATCAATGTTCTTTA+AGG + chr5_3:27943438-27943457 None:intergenic 20.0%
!!! TTAAAGAACATTGATTTAAG+TGG - chr5_3:27943437-27943456 Msa0807140:CDS 20.0%
!! ACTTAAATCAATGTTCTTTA+AGG + chr5_3:27943438-27943457 None:intergenic 20.0%
!!! TTAAAGAACATTGATTTAAG+TGG - chr5_3:27943437-27943456 Msa0807140:CDS 20.0%
! AAAGTGTGTAATGACAAAAT+TGG - chr5_3:27943005-27943024 Msa0807140:CDS 25.0%
!! AATTTTTCTATCAATTGTGC+TGG + chr5_3:27943261-27943280 None:intergenic 25.0%
! AATTGTTGAGAAAAGTCTTT+GGG + chr5_3:27943341-27943360 None:intergenic 25.0%
! TAATTGTTGAGAAAAGTCTT+TGG + chr5_3:27943342-27943361 None:intergenic 25.0%
! ATATTCAAAGGAACAGTAAT+TGG - chr5_3:27943680-27943699 Msa0807140:CDS 25.0%
! TTGAATATCATAAACAAGAC+CGG + chr5_3:27944080-27944099 None:intergenic 25.0%
! TGAATTTATACCACAAAGAA+AGG - chr5_3:27944402-27944421 Msa0807140:CDS 25.0%
! CACTTAAAAATGACAGATAT+TGG + chr5_3:27944499-27944518 None:intergenic 25.0%
! AAAGTGTGTAATGACAAAAT+TGG - chr5_3:27943005-27943024 Msa0807140:CDS 25.0%
!! AATTTTTCTATCAATTGTGC+TGG + chr5_3:27943261-27943280 None:intergenic 25.0%
! AATTGTTGAGAAAAGTCTTT+GGG + chr5_3:27943341-27943360 None:intergenic 25.0%
! TAATTGTTGAGAAAAGTCTT+TGG + chr5_3:27943342-27943361 None:intergenic 25.0%
! ATATTCAAAGGAACAGTAAT+TGG - chr5_3:27943680-27943699 Msa0807140:CDS 25.0%
! TTGAATATCATAAACAAGAC+CGG + chr5_3:27944080-27944099 None:intergenic 25.0%
! TGAATTTATACCACAAAGAA+AGG - chr5_3:27944402-27944421 Msa0807140:CDS 25.0%
! CACTTAAAAATGACAGATAT+TGG + chr5_3:27944499-27944518 None:intergenic 25.0%
AATCAGAAGATTTGCATAGT+TGG - chr5_3:27942427-27942446 Msa0807140:CDS 30.0%
! TTTTCCTCACAAAGAAAGAA+TGG - chr5_3:27942473-27942492 Msa0807140:CDS 30.0%
AAAACCATTCTTTCTTTGTG+AGG + chr5_3:27942480-27942499 None:intergenic 30.0%
CATAATTGGTATCATAGACA+CGG - chr5_3:27942695-27942714 Msa0807140:CDS 30.0%
ATAATTGGTATCATAGACAC+GGG - chr5_3:27942696-27942715 Msa0807140:CDS 30.0%
CATTGAAAGATGGATGTAAA+GGG + chr5_3:27942728-27942747 None:intergenic 30.0%
TCATTGAAAGATGGATGTAA+AGG + chr5_3:27942729-27942748 None:intergenic 30.0%
GTATGCAACAATAAACTCAT+AGG - chr5_3:27942810-27942829 Msa0807140:CDS 30.0%
! ATAGAAGATGCAAGTGTTTT+TGG - chr5_3:27942927-27942946 Msa0807140:CDS 30.0%
!!! AGTGTTTTTGGTAATGCTAA+AGG - chr5_3:27942939-27942958 Msa0807140:CDS 30.0%
TATATTGCTAAGTGAGCATT+AGG + chr5_3:27942984-27943003 None:intergenic 30.0%
ATGGATATAGCTATTGAAGA+TGG - chr5_3:27943056-27943075 Msa0807140:CDS 30.0%
! AATGTCTCAAGTATTGTGAA+AGG - chr5_3:27943485-27943504 Msa0807140:CDS 30.0%
AGGACAAGAAGTTGTAAATT+CGG - chr5_3:27943505-27943524 Msa0807140:CDS 30.0%
TTGAATATCAATGTTGCTGT+TGG + chr5_3:27943668-27943687 None:intergenic 30.0%
ACAGCAACATTGATATTCAA+AGG - chr5_3:27943668-27943687 Msa0807140:CDS 30.0%
GAAGAAAATGAAACAACAGA+AGG + chr5_3:27943719-27943738 None:intergenic 30.0%
!! GTTGTTTCATTTTCTTCAAG+AGG - chr5_3:27943722-27943741 Msa0807140:CDS 30.0%
ATTCTTAAACCAGACATCAT+CGG - chr5_3:27943767-27943786 Msa0807140:CDS 30.0%
!!! CATGATTGCTGATTTTATAG+CGG + chr5_3:27943942-27943961 None:intergenic 30.0%
TGAATATCATAAACAAGACC+GGG + chr5_3:27944079-27944098 None:intergenic 30.0%
AGATAAGGAACATAATCTTC+TGG + chr5_3:27944103-27944122 None:intergenic 30.0%
GATTATGTTCCTTATCTATG+TGG - chr5_3:27944106-27944125 Msa0807140:CDS 30.0%
AGATTGAAGTTATTGTTCAG+TGG - chr5_3:27944149-27944168 Msa0807140:CDS 30.0%
TCCTTCTTTCTCAGTATTAT+TGG - chr5_3:27944222-27944241 Msa0807140:CDS 30.0%
CCTTCTTTCTCAGTATTATT+GGG - chr5_3:27944223-27944242 Msa0807140:CDS 30.0%
CTTCTTTCTCAGTATTATTG+GGG - chr5_3:27944224-27944243 Msa0807140:CDS 30.0%
!! TCAGTGAATGTTATTTCACT+TGG + chr5_3:27944355-27944374 None:intergenic 30.0%
AAGTGAAATAACATTCACTG+AGG - chr5_3:27944354-27944373 Msa0807140:CDS 30.0%
AATCAGAAGATTTGCATAGT+TGG - chr5_3:27942427-27942446 Msa0807140:CDS 30.0%
! TTTTCCTCACAAAGAAAGAA+TGG - chr5_3:27942473-27942492 Msa0807140:CDS 30.0%
AAAACCATTCTTTCTTTGTG+AGG + chr5_3:27942480-27942499 None:intergenic 30.0%
CATAATTGGTATCATAGACA+CGG - chr5_3:27942695-27942714 Msa0807140:CDS 30.0%
ATAATTGGTATCATAGACAC+GGG - chr5_3:27942696-27942715 Msa0807140:CDS 30.0%
CATTGAAAGATGGATGTAAA+GGG + chr5_3:27942728-27942747 None:intergenic 30.0%
TCATTGAAAGATGGATGTAA+AGG + chr5_3:27942729-27942748 None:intergenic 30.0%
GTATGCAACAATAAACTCAT+AGG - chr5_3:27942810-27942829 Msa0807140:CDS 30.0%
! ATAGAAGATGCAAGTGTTTT+TGG - chr5_3:27942927-27942946 Msa0807140:CDS 30.0%
!!! AGTGTTTTTGGTAATGCTAA+AGG - chr5_3:27942939-27942958 Msa0807140:CDS 30.0%
TATATTGCTAAGTGAGCATT+AGG + chr5_3:27942984-27943003 None:intergenic 30.0%
ATGGATATAGCTATTGAAGA+TGG - chr5_3:27943056-27943075 Msa0807140:CDS 30.0%
! AATGTCTCAAGTATTGTGAA+AGG - chr5_3:27943485-27943504 Msa0807140:CDS 30.0%
AGGACAAGAAGTTGTAAATT+CGG - chr5_3:27943505-27943524 Msa0807140:CDS 30.0%
TTGAATATCAATGTTGCTGT+TGG + chr5_3:27943668-27943687 None:intergenic 30.0%
ACAGCAACATTGATATTCAA+AGG - chr5_3:27943668-27943687 Msa0807140:CDS 30.0%
GAAGAAAATGAAACAACAGA+AGG + chr5_3:27943719-27943738 None:intergenic 30.0%
!! GTTGTTTCATTTTCTTCAAG+AGG - chr5_3:27943722-27943741 Msa0807140:CDS 30.0%
ATTCTTAAACCAGACATCAT+CGG - chr5_3:27943767-27943786 Msa0807140:CDS 30.0%
!!! CATGATTGCTGATTTTATAG+CGG + chr5_3:27943942-27943961 None:intergenic 30.0%
TGAATATCATAAACAAGACC+GGG + chr5_3:27944079-27944098 None:intergenic 30.0%
AGATAAGGAACATAATCTTC+TGG + chr5_3:27944103-27944122 None:intergenic 30.0%
GATTATGTTCCTTATCTATG+TGG - chr5_3:27944106-27944125 Msa0807140:CDS 30.0%
AGATTGAAGTTATTGTTCAG+TGG - chr5_3:27944149-27944168 Msa0807140:CDS 30.0%
TCCTTCTTTCTCAGTATTAT+TGG - chr5_3:27944222-27944241 Msa0807140:CDS 30.0%
CCTTCTTTCTCAGTATTATT+GGG - chr5_3:27944223-27944242 Msa0807140:CDS 30.0%
CTTCTTTCTCAGTATTATTG+GGG - chr5_3:27944224-27944243 Msa0807140:CDS 30.0%
!! TCAGTGAATGTTATTTCACT+TGG + chr5_3:27944355-27944374 None:intergenic 30.0%
AAGTGAAATAACATTCACTG+AGG - chr5_3:27944354-27944373 Msa0807140:CDS 30.0%
TGCTGCATAACATGAAAATG+AGG + chr5_3:27942308-27942327 None:intergenic 35.0%
GTTATGCAGCATATCAATGT+TGG - chr5_3:27942317-27942336 Msa0807140:CDS 35.0%
AAGTTTGTGGAAGGAATGAA+TGG + chr5_3:27942455-27942474 None:intergenic 35.0%
TCTTTGTGAGGAAAAGTTTG+TGG + chr5_3:27942468-27942487 None:intergenic 35.0%
GTGAGTTGTGTGTAATTCAA+GGG + chr5_3:27942607-27942626 None:intergenic 35.0%
TGTGAGTTGTGTGTAATTCA+AGG + chr5_3:27942608-27942627 None:intergenic 35.0%
! CAATTATGACACCTTTTCCA+AGG + chr5_3:27942683-27942702 None:intergenic 35.0%
!! CTTGGAAAAGGTGTCATAAT+TGG - chr5_3:27942681-27942700 Msa0807140:CDS 35.0%
ATTCCTTCGTCATTGAAAGA+TGG + chr5_3:27942738-27942757 None:intergenic 35.0%
GATGTTCTTTCACTTTCACT+TGG - chr5_3:27943083-27943102 Msa0807140:CDS 35.0%
CTTTCACTTTCACTTGGTTT+AGG - chr5_3:27943089-27943108 Msa0807140:CDS 35.0%
TTTGAAGACCCAATTGCAAT+TGG - chr5_3:27943125-27943144 Msa0807140:CDS 35.0%
!! CAAAAGCACCAATTGCAATT+GGG + chr5_3:27943136-27943155 None:intergenic 35.0%
GGAAATGGTGAAGAATATGA+AGG - chr5_3:27943299-27943318 Msa0807140:CDS 35.0%
TATCCAGGTTCATTTGGATA+TGG - chr5_3:27943374-27943393 Msa0807140:CDS 35.0%
TTTCCATATCCAAATGAACC+TGG + chr5_3:27943380-27943399 None:intergenic 35.0%
! TCAATGTTCTTTAAGGATCC+TGG + chr5_3:27943431-27943450 None:intergenic 35.0%
GGACAAGAAGTTGTAAATTC+GGG - chr5_3:27943506-27943525 Msa0807140:CDS 35.0%
TAAGAATTCCTGGACTTTCT+TGG + chr5_3:27943754-27943773 None:intergenic 35.0%
! ATGTCTGGTTTAAGAATTCC+TGG + chr5_3:27943764-27943783 None:intergenic 35.0%
CCAGAAATAATGTCAAAAGC+TGG + chr5_3:27943845-27943864 None:intergenic 35.0%
! CCAGCTTTTGACATTATTTC+TGG - chr5_3:27943842-27943861 Msa0807140:CDS 35.0%
AAAAGCCTTTGATCCAGTAT+AGG + chr5_3:27943998-27944017 None:intergenic 35.0%
TGTTCCTTATCTATGTGGTT+TGG - chr5_3:27944111-27944130 Msa0807140:CDS 35.0%
GTTCCTTATCTATGTGGTTT+GGG - chr5_3:27944112-27944131 Msa0807140:CDS 35.0%
TAACCCAAACCACATAGATA+AGG + chr5_3:27944118-27944137 None:intergenic 35.0%
GGATAATTCAATTGTGCTTC+TGG + chr5_3:27944205-27944224 None:intergenic 35.0%
CCCAATAATACTGAGAAAGA+AGG + chr5_3:27944226-27944245 None:intergenic 35.0%
! ACCAGAACATTGACTAATGT+TGG - chr5_3:27944265-27944284 Msa0807140:CDS 35.0%
! CCAGAACATTGACTAATGTT+GGG - chr5_3:27944266-27944285 Msa0807140:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG - chr5_3:27944309-27944328 Msa0807140:CDS 35.0%
! CTTCTGTTTTCCTTTCTTTG+TGG + chr5_3:27944415-27944434 None:intergenic 35.0%
CACAAAGAAAGGAAAACAGA+AGG - chr5_3:27944413-27944432 Msa0807140:CDS 35.0%
TGTCTGATAAACATGCTGTT+AGG - chr5_3:27944470-27944489 Msa0807140:CDS 35.0%
TGCTGCATAACATGAAAATG+AGG + chr5_3:27942308-27942327 None:intergenic 35.0%
GTTATGCAGCATATCAATGT+TGG - chr5_3:27942317-27942336 Msa0807140:CDS 35.0%
AAGTTTGTGGAAGGAATGAA+TGG + chr5_3:27942455-27942474 None:intergenic 35.0%
TCTTTGTGAGGAAAAGTTTG+TGG + chr5_3:27942468-27942487 None:intergenic 35.0%
GTGAGTTGTGTGTAATTCAA+GGG + chr5_3:27942607-27942626 None:intergenic 35.0%
TGTGAGTTGTGTGTAATTCA+AGG + chr5_3:27942608-27942627 None:intergenic 35.0%
! CAATTATGACACCTTTTCCA+AGG + chr5_3:27942683-27942702 None:intergenic 35.0%
!! CTTGGAAAAGGTGTCATAAT+TGG - chr5_3:27942681-27942700 Msa0807140:CDS 35.0%
ATTCCTTCGTCATTGAAAGA+TGG + chr5_3:27942738-27942757 None:intergenic 35.0%
GATGTTCTTTCACTTTCACT+TGG - chr5_3:27943083-27943102 Msa0807140:CDS 35.0%
CTTTCACTTTCACTTGGTTT+AGG - chr5_3:27943089-27943108 Msa0807140:CDS 35.0%
TTTGAAGACCCAATTGCAAT+TGG - chr5_3:27943125-27943144 Msa0807140:CDS 35.0%
!! CAAAAGCACCAATTGCAATT+GGG + chr5_3:27943136-27943155 None:intergenic 35.0%
GGAAATGGTGAAGAATATGA+AGG - chr5_3:27943299-27943318 Msa0807140:CDS 35.0%
TATCCAGGTTCATTTGGATA+TGG - chr5_3:27943374-27943393 Msa0807140:CDS 35.0%
TTTCCATATCCAAATGAACC+TGG + chr5_3:27943380-27943399 None:intergenic 35.0%
! TCAATGTTCTTTAAGGATCC+TGG + chr5_3:27943431-27943450 None:intergenic 35.0%
GGACAAGAAGTTGTAAATTC+GGG - chr5_3:27943506-27943525 Msa0807140:CDS 35.0%
TAAGAATTCCTGGACTTTCT+TGG + chr5_3:27943754-27943773 None:intergenic 35.0%
! ATGTCTGGTTTAAGAATTCC+TGG + chr5_3:27943764-27943783 None:intergenic 35.0%
CCAGAAATAATGTCAAAAGC+TGG + chr5_3:27943845-27943864 None:intergenic 35.0%
! CCAGCTTTTGACATTATTTC+TGG - chr5_3:27943842-27943861 Msa0807140:CDS 35.0%
AAAAGCCTTTGATCCAGTAT+AGG + chr5_3:27943998-27944017 None:intergenic 35.0%
TGTTCCTTATCTATGTGGTT+TGG - chr5_3:27944111-27944130 Msa0807140:CDS 35.0%
GTTCCTTATCTATGTGGTTT+GGG - chr5_3:27944112-27944131 Msa0807140:CDS 35.0%
TAACCCAAACCACATAGATA+AGG + chr5_3:27944118-27944137 None:intergenic 35.0%
GGATAATTCAATTGTGCTTC+TGG + chr5_3:27944205-27944224 None:intergenic 35.0%
CCCAATAATACTGAGAAAGA+AGG + chr5_3:27944226-27944245 None:intergenic 35.0%
! ACCAGAACATTGACTAATGT+TGG - chr5_3:27944265-27944284 Msa0807140:CDS 35.0%
! CCAGAACATTGACTAATGTT+GGG - chr5_3:27944266-27944285 Msa0807140:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG - chr5_3:27944309-27944328 Msa0807140:CDS 35.0%
! CTTCTGTTTTCCTTTCTTTG+TGG + chr5_3:27944415-27944434 None:intergenic 35.0%
CACAAAGAAAGGAAAACAGA+AGG - chr5_3:27944413-27944432 Msa0807140:CDS 35.0%
TGTCTGATAAACATGCTGTT+AGG - chr5_3:27944470-27944489 Msa0807140:CDS 35.0%
TGTGAGGAAAAGTTTGTGGA+AGG + chr5_3:27942464-27942483 None:intergenic 40.0%
! TGAAGAGATTTGGCTTCTTC+TGG + chr5_3:27942546-27942565 None:intergenic 40.0%
ACCTTTCGCTTGAAGAGATT+TGG + chr5_3:27942556-27942575 None:intergenic 40.0%
TGTAATTCAAGGGTCCTTTC+AGG + chr5_3:27942597-27942616 None:intergenic 40.0%
AACTCACACTCCAACTTTCT+TGG - chr5_3:27942620-27942639 Msa0807140:CDS 40.0%
ACTCACACTCCAACTTTCTT+GGG - chr5_3:27942621-27942640 Msa0807140:CDS 40.0%
TGTTTCAGACCCAAGAAAGT+TGG + chr5_3:27942633-27942652 None:intergenic 40.0%
! ACTTTCTTGGGTCTGAAACA+AGG - chr5_3:27942633-27942652 Msa0807140:CDS 40.0%
TGAAACAAGGACAAGGATTG+TGG - chr5_3:27942646-27942665 Msa0807140:CDS 40.0%
AGCGATGATAACCTTGGAAA+AGG - chr5_3:27942669-27942688 Msa0807140:CDS 40.0%
CATCCATCTTTCAATGACGA+AGG - chr5_3:27942732-27942751 Msa0807140:CDS 40.0%
GAAAGGCCATTGTGAATTCA+CGG - chr5_3:27942779-27942798 Msa0807140:CDS 40.0%
AAAGGCCATTGTGAATTCAC+GGG - chr5_3:27942780-27942799 Msa0807140:CDS 40.0%
ACTCATAGGTGCAAGAAACA+TGG - chr5_3:27942824-27942843 Msa0807140:CDS 40.0%
TGGAAGAAGTTCTCAAATGG+AGG + chr5_3:27942870-27942889 None:intergenic 40.0%
CCATGGAAGAAGTTCTCAAA+TGG + chr5_3:27942873-27942892 None:intergenic 40.0%
CCATTTGAGAACTTCTTCCA+TGG - chr5_3:27942870-27942889 Msa0807140:CDS 40.0%
AAGTGCTATCTTAGCTGCAA+TGG - chr5_3:27943037-27943056 Msa0807140:CDS 40.0%
GCAATTGGGTCTTCAAAGAA+TGG + chr5_3:27943122-27943141 None:intergenic 40.0%
!! GCAAAAGCACCAATTGCAAT+TGG + chr5_3:27943137-27943156 None:intergenic 40.0%
! GCTTTTGCTGCTACTCAAAA+TGG - chr5_3:27943149-27943168 Msa0807140:CDS 40.0%
ATTGTAGCATCAGCAAAGCT+AGG - chr5_3:27943278-27943297 Msa0807140:CDS 40.0%
GTTGAGAAAAGTCTTTGGGT+TGG + chr5_3:27943337-27943356 None:intergenic 40.0%
! TTATTGCCACTTGTGTATCC+AGG - chr5_3:27943359-27943378 Msa0807140:CDS 40.0%
AATGAACCTGGATACACAAG+TGG + chr5_3:27943368-27943387 None:intergenic 40.0%
CTTGTGTATCCAGGTTCATT+TGG - chr5_3:27943368-27943387 Msa0807140:CDS 40.0%
AATCAGTCCTTGTGTTTACC+AGG - chr5_3:27943410-27943429 Msa0807140:CDS 40.0%
TAAGGATCCTGGTAAACACA+AGG + chr5_3:27943420-27943439 None:intergenic 40.0%
AAAGTAGTGCTGTGTGATGT+AGG - chr5_3:27943461-27943480 Msa0807140:CDS 40.0%
CAAGAAGTTGTAAATTCGGG+TGG - chr5_3:27943509-27943528 Msa0807140:CDS 40.0%
!!! CAAGTGCTTTTGAGTTTGCA+AGG + chr5_3:27943547-27943566 None:intergenic 40.0%
!! CTTGCAAACTCAAAAGCACT+TGG - chr5_3:27943545-27943564 Msa0807140:CDS 40.0%
ACATAACTCACTTCAACTGC+AGG + chr5_3:27943602-27943621 None:intergenic 40.0%
GTTGAAGTGAGTTATGTAGC+TGG - chr5_3:27943605-27943624 Msa0807140:CDS 40.0%
! CAATGTTGCTGTTGGATTGT+AGG + chr5_3:27943660-27943679 None:intergenic 40.0%
TCAATGCAGCAATACCACTT+AGG + chr5_3:27943889-27943908 None:intergenic 40.0%
TCAAAAGTTCTCACCCTGAT+TGG - chr5_3:27943909-27943928 Msa0807140:CDS 40.0%
!!! ATTGCTGATTTTATAGCGGC+TGG + chr5_3:27943938-27943957 None:intergenic 40.0%
ACCGCTAATACTCTAAACCT+TGG - chr5_3:27943965-27943984 Msa0807140:CDS 40.0%
! GCCAAGGTTTAGAGTATTAG+CGG + chr5_3:27943969-27943988 None:intergenic 40.0%
GCTAATACTCTAAACCTTGG+CGG - chr5_3:27943968-27943987 Msa0807140:CDS 40.0%
CTAATACTCTAAACCTTGGC+GGG - chr5_3:27943969-27943988 Msa0807140:CDS 40.0%
GGATTCCTATACTGGATCAA+AGG - chr5_3:27943990-27944009 Msa0807140:CDS 40.0%
CCCAACATTAGTCAATGTTC+TGG + chr5_3:27944269-27944288 None:intergenic 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG - chr5_3:27944315-27944334 Msa0807140:CDS 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG - chr5_3:27944316-27944335 Msa0807140:CDS 40.0%
ATTCACTGAGGTCAATGAGA+GGG - chr5_3:27944366-27944385 Msa0807140:CDS 40.0%
AAGGAATCAAACTTTCGCTC+AGG - chr5_3:27944432-27944451 Msa0807140:CDS 40.0%
AGGAATCAAACTTTCGCTCA+GGG - chr5_3:27944433-27944452 Msa0807140:CDS 40.0%
TGTGAGGAAAAGTTTGTGGA+AGG + chr5_3:27942464-27942483 None:intergenic 40.0%
! TGAAGAGATTTGGCTTCTTC+TGG + chr5_3:27942546-27942565 None:intergenic 40.0%
ACCTTTCGCTTGAAGAGATT+TGG + chr5_3:27942556-27942575 None:intergenic 40.0%
TGTAATTCAAGGGTCCTTTC+AGG + chr5_3:27942597-27942616 None:intergenic 40.0%
AACTCACACTCCAACTTTCT+TGG - chr5_3:27942620-27942639 Msa0807140:CDS 40.0%
ACTCACACTCCAACTTTCTT+GGG - chr5_3:27942621-27942640 Msa0807140:CDS 40.0%
TGTTTCAGACCCAAGAAAGT+TGG + chr5_3:27942633-27942652 None:intergenic 40.0%
! ACTTTCTTGGGTCTGAAACA+AGG - chr5_3:27942633-27942652 Msa0807140:CDS 40.0%
TGAAACAAGGACAAGGATTG+TGG - chr5_3:27942646-27942665 Msa0807140:CDS 40.0%
AGCGATGATAACCTTGGAAA+AGG - chr5_3:27942669-27942688 Msa0807140:CDS 40.0%
CATCCATCTTTCAATGACGA+AGG - chr5_3:27942732-27942751 Msa0807140:CDS 40.0%
GAAAGGCCATTGTGAATTCA+CGG - chr5_3:27942779-27942798 Msa0807140:CDS 40.0%
AAAGGCCATTGTGAATTCAC+GGG - chr5_3:27942780-27942799 Msa0807140:CDS 40.0%
ACTCATAGGTGCAAGAAACA+TGG - chr5_3:27942824-27942843 Msa0807140:CDS 40.0%
TGGAAGAAGTTCTCAAATGG+AGG + chr5_3:27942870-27942889 None:intergenic 40.0%
CCATGGAAGAAGTTCTCAAA+TGG + chr5_3:27942873-27942892 None:intergenic 40.0%
CCATTTGAGAACTTCTTCCA+TGG - chr5_3:27942870-27942889 Msa0807140:CDS 40.0%
AAGTGCTATCTTAGCTGCAA+TGG - chr5_3:27943037-27943056 Msa0807140:CDS 40.0%
GCAATTGGGTCTTCAAAGAA+TGG + chr5_3:27943122-27943141 None:intergenic 40.0%
!! GCAAAAGCACCAATTGCAAT+TGG + chr5_3:27943137-27943156 None:intergenic 40.0%
! GCTTTTGCTGCTACTCAAAA+TGG - chr5_3:27943149-27943168 Msa0807140:CDS 40.0%
ATTGTAGCATCAGCAAAGCT+AGG - chr5_3:27943278-27943297 Msa0807140:CDS 40.0%
GTTGAGAAAAGTCTTTGGGT+TGG + chr5_3:27943337-27943356 None:intergenic 40.0%
! TTATTGCCACTTGTGTATCC+AGG - chr5_3:27943359-27943378 Msa0807140:CDS 40.0%
AATGAACCTGGATACACAAG+TGG + chr5_3:27943368-27943387 None:intergenic 40.0%
CTTGTGTATCCAGGTTCATT+TGG - chr5_3:27943368-27943387 Msa0807140:CDS 40.0%
AATCAGTCCTTGTGTTTACC+AGG - chr5_3:27943410-27943429 Msa0807140:CDS 40.0%
TAAGGATCCTGGTAAACACA+AGG + chr5_3:27943420-27943439 None:intergenic 40.0%
AAAGTAGTGCTGTGTGATGT+AGG - chr5_3:27943461-27943480 Msa0807140:CDS 40.0%
CAAGAAGTTGTAAATTCGGG+TGG - chr5_3:27943509-27943528 Msa0807140:CDS 40.0%
!!! CAAGTGCTTTTGAGTTTGCA+AGG + chr5_3:27943547-27943566 None:intergenic 40.0%
!! CTTGCAAACTCAAAAGCACT+TGG - chr5_3:27943545-27943564 Msa0807140:CDS 40.0%
ACATAACTCACTTCAACTGC+AGG + chr5_3:27943602-27943621 None:intergenic 40.0%
GTTGAAGTGAGTTATGTAGC+TGG - chr5_3:27943605-27943624 Msa0807140:CDS 40.0%
! CAATGTTGCTGTTGGATTGT+AGG + chr5_3:27943660-27943679 None:intergenic 40.0%
TCAATGCAGCAATACCACTT+AGG + chr5_3:27943889-27943908 None:intergenic 40.0%
TCAAAAGTTCTCACCCTGAT+TGG - chr5_3:27943909-27943928 Msa0807140:CDS 40.0%
!!! ATTGCTGATTTTATAGCGGC+TGG + chr5_3:27943938-27943957 None:intergenic 40.0%
ACCGCTAATACTCTAAACCT+TGG - chr5_3:27943965-27943984 Msa0807140:CDS 40.0%
! GCCAAGGTTTAGAGTATTAG+CGG + chr5_3:27943969-27943988 None:intergenic 40.0%
GCTAATACTCTAAACCTTGG+CGG - chr5_3:27943968-27943987 Msa0807140:CDS 40.0%
CTAATACTCTAAACCTTGGC+GGG - chr5_3:27943969-27943988 Msa0807140:CDS 40.0%
GGATTCCTATACTGGATCAA+AGG - chr5_3:27943990-27944009 Msa0807140:CDS 40.0%
CCCAACATTAGTCAATGTTC+TGG + chr5_3:27944269-27944288 None:intergenic 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG - chr5_3:27944315-27944334 Msa0807140:CDS 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG - chr5_3:27944316-27944335 Msa0807140:CDS 40.0%
ATTCACTGAGGTCAATGAGA+GGG - chr5_3:27944366-27944385 Msa0807140:CDS 40.0%
AAGGAATCAAACTTTCGCTC+AGG - chr5_3:27944432-27944451 Msa0807140:CDS 40.0%
AGGAATCAAACTTTCGCTCA+GGG - chr5_3:27944433-27944452 Msa0807140:CDS 40.0%
! CATATCAATGTTGGCTGCAG+AGG - chr5_3:27942326-27942345 Msa0807140:CDS 45.0%
! CAAATCCAGAGGCTACTTTG+CGG + chr5_3:27942509-27942528 None:intergenic 45.0%
TAGCTTCACAGCAAATCCAG+AGG + chr5_3:27942520-27942539 None:intergenic 45.0%
GCCAAATCTCTTCAAGCGAA+AGG - chr5_3:27942552-27942571 Msa0807140:CDS 45.0%
TTGTGTCAGCAAGACCTGAA+AGG - chr5_3:27942580-27942599 Msa0807140:CDS 45.0%
! TTGGGTCTGAAACAAGGACA+AGG - chr5_3:27942639-27942658 Msa0807140:CDS 45.0%
TTGTGGAGCGATGATAACCT+TGG - chr5_3:27942663-27942682 Msa0807140:CDS 45.0%
! CAATGGCCTTTCCATTTTGC+AGG + chr5_3:27942771-27942790 None:intergenic 45.0%
TATGAATCTTCCTGCAGCCT+CGG + chr5_3:27942910-27942929 None:intergenic 45.0%
! AATGCTAAAGGTGTAGCAGC+AGG - chr5_3:27942951-27942970 Msa0807140:CDS 45.0%
! TAAAGGTGTAGCAGCAGGAA+TGG - chr5_3:27942956-27942975 Msa0807140:CDS 45.0%
!! TTGGAGAGAGTGCTATATCC+AGG + chr5_3:27943209-27943228 None:intergenic 45.0%
AAGGATCCAAGGAGCTTCAT+TGG + chr5_3:27943228-27943247 None:intergenic 45.0%
! ATCAATTGTGCTGGCACCAA+CGG + chr5_3:27943252-27943271 None:intergenic 45.0%
GCATCAGCAAAGCTAGGAAA+TGG - chr5_3:27943284-27943303 Msa0807140:CDS 45.0%
! ACAAGGACTGATTCTGTGCT+TGG + chr5_3:27943403-27943422 None:intergenic 45.0%
ATTCCTGGACTTTCTTGGCT+TGG + chr5_3:27943749-27943768 None:intergenic 45.0%
! TGTCAACATTCTAGCTGCGT+GGG - chr5_3:27943796-27943815 Msa0807140:CDS 45.0%
ATGTCTTGTCCTCACCTAAG+TGG - chr5_3:27943872-27943891 Msa0807140:CDS 45.0%
! ACTGGATCAAAGGCTTTTGC+CGG - chr5_3:27944000-27944019 Msa0807140:CDS 45.0%
CCAGTAGCGAAAATATCAGC+CGG + chr5_3:27944022-27944041 None:intergenic 45.0%
! GATATTTTCGCTACTGGTGC+AGG - chr5_3:27944025-27944044 Msa0807140:CDS 45.0%
CCTGTTAAAGCAAACGATCC+CGG - chr5_3:27944058-27944077 Msa0807140:CDS 45.0%
ACACTCATACCCAAAGCCAA+AGG + chr5_3:27944328-27944347 None:intergenic 45.0%
CATTCACTGAGGTCAATGAG+AGG - chr5_3:27944365-27944384 Msa0807140:CDS 45.0%
! CATATCAATGTTGGCTGCAG+AGG - chr5_3:27942326-27942345 Msa0807140:CDS 45.0%
! CAAATCCAGAGGCTACTTTG+CGG + chr5_3:27942509-27942528 None:intergenic 45.0%
TAGCTTCACAGCAAATCCAG+AGG + chr5_3:27942520-27942539 None:intergenic 45.0%
GCCAAATCTCTTCAAGCGAA+AGG - chr5_3:27942552-27942571 Msa0807140:CDS 45.0%
TTGTGTCAGCAAGACCTGAA+AGG - chr5_3:27942580-27942599 Msa0807140:CDS 45.0%
! TTGGGTCTGAAACAAGGACA+AGG - chr5_3:27942639-27942658 Msa0807140:CDS 45.0%
TTGTGGAGCGATGATAACCT+TGG - chr5_3:27942663-27942682 Msa0807140:CDS 45.0%
! CAATGGCCTTTCCATTTTGC+AGG + chr5_3:27942771-27942790 None:intergenic 45.0%
TATGAATCTTCCTGCAGCCT+CGG + chr5_3:27942910-27942929 None:intergenic 45.0%
! AATGCTAAAGGTGTAGCAGC+AGG - chr5_3:27942951-27942970 Msa0807140:CDS 45.0%
! TAAAGGTGTAGCAGCAGGAA+TGG - chr5_3:27942956-27942975 Msa0807140:CDS 45.0%
!! TTGGAGAGAGTGCTATATCC+AGG + chr5_3:27943209-27943228 None:intergenic 45.0%
AAGGATCCAAGGAGCTTCAT+TGG + chr5_3:27943228-27943247 None:intergenic 45.0%
! ATCAATTGTGCTGGCACCAA+CGG + chr5_3:27943252-27943271 None:intergenic 45.0%
GCATCAGCAAAGCTAGGAAA+TGG - chr5_3:27943284-27943303 Msa0807140:CDS 45.0%
! ACAAGGACTGATTCTGTGCT+TGG + chr5_3:27943403-27943422 None:intergenic 45.0%
ATTCCTGGACTTTCTTGGCT+TGG + chr5_3:27943749-27943768 None:intergenic 45.0%
! TGTCAACATTCTAGCTGCGT+GGG - chr5_3:27943796-27943815 Msa0807140:CDS 45.0%
ATGTCTTGTCCTCACCTAAG+TGG - chr5_3:27943872-27943891 Msa0807140:CDS 45.0%
! ACTGGATCAAAGGCTTTTGC+CGG - chr5_3:27944000-27944019 Msa0807140:CDS 45.0%
CCAGTAGCGAAAATATCAGC+CGG + chr5_3:27944022-27944041 None:intergenic 45.0%
! GATATTTTCGCTACTGGTGC+AGG - chr5_3:27944025-27944044 Msa0807140:CDS 45.0%
CCTGTTAAAGCAAACGATCC+CGG - chr5_3:27944058-27944077 Msa0807140:CDS 45.0%
ACACTCATACCCAAAGCCAA+AGG + chr5_3:27944328-27944347 None:intergenic 45.0%
CATTCACTGAGGTCAATGAG+AGG - chr5_3:27944365-27944384 Msa0807140:CDS 45.0%
TCTTACCGCAAAGTAGCCTC+TGG - chr5_3:27942501-27942520 Msa0807140:CDS 50.0%
!! TTCCATTTTGCAGGTGGTGG+CGG + chr5_3:27942762-27942781 None:intergenic 50.0%
! CCTTTCCATTTTGCAGGTGG+TGG + chr5_3:27942765-27942784 None:intergenic 50.0%
CCACCACCTGCAAAATGGAA+AGG - chr5_3:27942762-27942781 Msa0807140:CDS 50.0%
! TGGCCTTTCCATTTTGCAGG+TGG + chr5_3:27942768-27942787 None:intergenic 50.0%
GCCATTGTGAATTCACGGGA+GGG - chr5_3:27942784-27942803 Msa0807140:CDS 50.0%
AGTTGCTCTGCTGCAAACTC+TGG - chr5_3:27943182-27943201 Msa0807140:CDS 50.0%
CTCTCTCCAATGAAGCTCCT+TGG - chr5_3:27943219-27943238 Msa0807140:CDS 50.0%
AAACCAGACATCATCGGTCC+TGG - chr5_3:27943773-27943792 Msa0807140:CDS 50.0%
GCAGCTAGAATGTTGACACC+AGG + chr5_3:27943794-27943813 None:intergenic 50.0%
! GTGTCAACATTCTAGCTGCG+TGG - chr5_3:27943795-27943814 Msa0807140:CDS 50.0%
GCAGCAATACCACTTAGGTG+AGG + chr5_3:27943884-27943903 None:intergenic 50.0%
! CCGGCTGATATTTTCGCTAC+TGG - chr5_3:27944019-27944038 Msa0807140:CDS 50.0%
CCGGGATCGTTTGCTTTAAC+AGG + chr5_3:27944061-27944080 None:intergenic 50.0%
TCTTACCGCAAAGTAGCCTC+TGG - chr5_3:27942501-27942520 Msa0807140:CDS 50.0%
!! TTCCATTTTGCAGGTGGTGG+CGG + chr5_3:27942762-27942781 None:intergenic 50.0%
! CCTTTCCATTTTGCAGGTGG+TGG + chr5_3:27942765-27942784 None:intergenic 50.0%
CCACCACCTGCAAAATGGAA+AGG - chr5_3:27942762-27942781 Msa0807140:CDS 50.0%
! TGGCCTTTCCATTTTGCAGG+TGG + chr5_3:27942768-27942787 None:intergenic 50.0%
GCCATTGTGAATTCACGGGA+GGG - chr5_3:27942784-27942803 Msa0807140:CDS 50.0%
AGTTGCTCTGCTGCAAACTC+TGG - chr5_3:27943182-27943201 Msa0807140:CDS 50.0%
CTCTCTCCAATGAAGCTCCT+TGG - chr5_3:27943219-27943238 Msa0807140:CDS 50.0%
AAACCAGACATCATCGGTCC+TGG - chr5_3:27943773-27943792 Msa0807140:CDS 50.0%
GCAGCTAGAATGTTGACACC+AGG + chr5_3:27943794-27943813 None:intergenic 50.0%
! GTGTCAACATTCTAGCTGCG+TGG - chr5_3:27943795-27943814 Msa0807140:CDS 50.0%
GCAGCAATACCACTTAGGTG+AGG + chr5_3:27943884-27943903 None:intergenic 50.0%
! CCGGCTGATATTTTCGCTAC+TGG - chr5_3:27944019-27944038 Msa0807140:CDS 50.0%
CCGGGATCGTTTGCTTTAAC+AGG + chr5_3:27944061-27944080 None:intergenic 50.0%
GGCCATTGTGAATTCACGGG+AGG - chr5_3:27942783-27942802 Msa0807140:CDS 55.0%
GCCCTCCCGTGAATTCACAA+TGG + chr5_3:27942788-27942807 None:intergenic 55.0%
TCTGCTGCAAACTCTGGTCC+TGG - chr5_3:27943188-27943207 Msa0807140:CDS 55.0%
GCTCCTTGGATCCTTACCGT+TGG - chr5_3:27943233-27943252 Msa0807140:CDS 55.0%
GCACCAACGGTAAGGATCCA+AGG + chr5_3:27943239-27943258 None:intergenic 55.0%
! TTGTGCTGGCACCAACGGTA+AGG + chr5_3:27943247-27943266 None:intergenic 55.0%
GGACCAAGCCAAGAAAGTCC+AGG - chr5_3:27943743-27943762 Msa0807140:CDS 55.0%
ACACCAGGACCGATGATGTC+TGG + chr5_3:27943779-27943798 None:intergenic 55.0%
CCAGTATAGGAATCCCGCCA+AGG + chr5_3:27943985-27944004 None:intergenic 55.0%
CCTTGGCGGGATTCCTATAC+TGG - chr5_3:27943982-27944001 Msa0807140:CDS 55.0%
GGCCATTGTGAATTCACGGG+AGG - chr5_3:27942783-27942802 Msa0807140:CDS 55.0%
GCCCTCCCGTGAATTCACAA+TGG + chr5_3:27942788-27942807 None:intergenic 55.0%
TCTGCTGCAAACTCTGGTCC+TGG - chr5_3:27943188-27943207 Msa0807140:CDS 55.0%
GCTCCTTGGATCCTTACCGT+TGG - chr5_3:27943233-27943252 Msa0807140:CDS 55.0%
GCACCAACGGTAAGGATCCA+AGG + chr5_3:27943239-27943258 None:intergenic 55.0%
! TTGTGCTGGCACCAACGGTA+AGG + chr5_3:27943247-27943266 None:intergenic 55.0%
GGACCAAGCCAAGAAAGTCC+AGG - chr5_3:27943743-27943762 Msa0807140:CDS 55.0%
ACACCAGGACCGATGATGTC+TGG + chr5_3:27943779-27943798 None:intergenic 55.0%
CCAGTATAGGAATCCCGCCA+AGG + chr5_3:27943985-27944004 None:intergenic 55.0%
CCTTGGCGGGATTCCTATAC+TGG - chr5_3:27943982-27944001 Msa0807140:CDS 55.0%
TGCCGCCACCACCTGCAAAA+TGG - chr5_3:27942757-27942776 Msa0807140:CDS 60.0%
TAGCGGCTGGCGACCAATCA+GGG + chr5_3:27943925-27943944 None:intergenic 60.0%
ATAGCGGCTGGCGACCAATC+AGG + chr5_3:27943926-27943945 None:intergenic 60.0%
TCGCTCAGGGCTCTCTCACT+TGG - chr5_3:27944446-27944465 Msa0807140:CDS 60.0%
CGCTCAGGGCTCTCTCACTT+GGG - chr5_3:27944447-27944466 Msa0807140:CDS 60.0%
TGCCGCCACCACCTGCAAAA+TGG - chr5_3:27942757-27942776 Msa0807140:CDS 60.0%
TAGCGGCTGGCGACCAATCA+GGG + chr5_3:27943925-27943944 None:intergenic 60.0%
ATAGCGGCTGGCGACCAATC+AGG + chr5_3:27943926-27943945 None:intergenic 60.0%
TCGCTCAGGGCTCTCTCACT+TGG - chr5_3:27944446-27944465 Msa0807140:CDS 60.0%
CGCTCAGGGCTCTCTCACTT+GGG - chr5_3:27944447-27944466 Msa0807140:CDS 60.0%
CGGCAGCGGTGTGTGTTCCA+TGG + chr5_3:27942890-27942909 None:intergenic 65.0%
TGGAACACACACCGCTGCCG+AGG - chr5_3:27942890-27942909 Msa0807140:CDS 65.0%
TCTTCCTGCAGCCTCGGCAG+CGG + chr5_3:27942904-27942923 None:intergenic 65.0%
CGGCAGCGGTGTGTGTTCCA+TGG + chr5_3:27942890-27942909 None:intergenic 65.0%
TGGAACACACACCGCTGCCG+AGG - chr5_3:27942890-27942909 Msa0807140:CDS 65.0%
TCTTCCTGCAGCCTCGGCAG+CGG + chr5_3:27942904-27942923 None:intergenic 65.0%
CACACCGCTGCCGAGGCTGC+AGG - chr5_3:27942897-27942916 Msa0807140:CDS 75.0%
CACACCGCTGCCGAGGCTGC+AGG - chr5_3:27942897-27942916 Msa0807140:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 27942273 27944519 27942273 ID=Msa0807140;Name=Msa0807140
chr5_3 mRNA 27942273 27944519 27942273 ID=Msa0807140-mRNA-1;Parent=Msa0807140;Name=Msa0807140-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|-1|0|1|-1|1|1|0|748
chr5_3 exon 27942273 27944519 27942273 ID=Msa0807140-mRNA-1:exon:9957;Parent=Msa0807140-mRNA-1
chr5_3 CDS 27942273 27944519 27942273 ID=Msa0807140-mRNA-1:cds;Parent=Msa0807140-mRNA-1
Gene Sequence

>Msa0807140

ATGATGAAGATGGAGCTTACATTGCTTGTTAGCCTCATTTTCATGTTATGCAGCATATCAATGTTGGCTGCAGAGGAGAATCTAGAACATGATCAAATGAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCTCTTCAATCAGAAGATTTGCATAGTTGGTACCATTCATTCCTTCCACAAACTTTTCCTCACAAAGAAAGAATGGTTTTCTCTTACCGCAAAGTAGCCTCTGGATTTGCTGTGAAGCTAACACCAGAAGAAGCCAAATCTCTTCAAGCGAAAGGTGAAATTGTGTCAGCAAGACCTGAAAGGACCCTTGAATTACACACAACTCACACTCCAACTTTCTTGGGTCTGAAACAAGGACAAGGATTGTGGAGCGATGATAACCTTGGAAAAGGTGTCATAATTGGTATCATAGACACGGGAATATTCCCTTTACATCCATCTTTCAATGACGAAGGAATGCCGCCACCACCTGCAAAATGGAAAGGCCATTGTGAATTCACGGGAGGGCAAGTATGCAACAATAAACTCATAGGTGCAAGAAACATGGTCAAAAGTGCAATTCAAGAGCCTCCATTTGAGAACTTCTTCCATGGAACACACACCGCTGCCGAGGCTGCAGGAAGATTCATAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCAGGAATGGCACCTAATGCTCACTTAGCAATATACAAAGTGTGTAATGACAAAATTGGATGCACTGAAAGTGCTATCTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTATTTTTGTTAGTTGCTCTGCTGCAAACTCTGGTCCTGGATATAGCACTCTCTCCAATGAAGCTCCTTGGATCCTTACCGTTGGTGCCAGCACAATTGATAGAAAAATTGTAGCATCAGCAAAGCTAGGAAATGGTGAAGAATATGAAGGTGAAACGTTGTTCCAACCCAAAGACTTTTCTCAACAATTATTGCCACTTGTGTATCCAGGTTCATTTGGATATGGAAACCAAGCACAGAATCAGTCCTTGTGTTTACCAGGATCCTTAAAGAACATTGATTTAAGTGGAAAAGTAGTGCTGTGTGATGTAGGAAATGTCTCAAGTATTGTGAAAGGACAAGAAGTTGTAAATTCGGGTGGTGTAGCAATGATCCTTGCAAACTCAAAAGCACTTGGTTTCAGTACTTTTGCTATTGCTCATGTTTTACCTGCAGTTGAAGTGAGTTATGTAGCTGGTTTAACAATCAAAGATTACATTAACTCAACCTACAATCCAACAGCAACATTGATATTCAAAGGAACAGTAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTCATTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCAGGAATTCTTAAACCAGACATCATCGGTCCTGGTGTCAACATTCTAGCTGCGTGGGCTATTTCTGTAGACAACAAAGTTCCAGCTTTTGACATTATTTCTGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCGCCAGCCGCTATAAAATCAGCAATCATGACAACCGCTAATACTCTAAACCTTGGCGGGATTCCTATACTGGATCAAAGGCTTTTGCCGGCTGATATTTTCGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCAAACGATCCCGGTCTTGTTTATGATATTCAACCAGAAGATTATGTTCCTTATCTATGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTAATGTGAAAAGTATACCAGAAGCACAATTGAATTATCCTTCTTTCTCAGTATTATTGGGGTCTGATACACAGTATTATACCAGAACATTGACTAATGTTGGGTTTGCAAATTCAACATATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTCAATGAGAGGGTTAGTTTCTCTGTTGAATTTATACCACAAAGAAAGGAAAACAGAAGGAATCAAACTTTCGCTCAGGGCTCTCTCACTTGGGTGTCTGATAAACATGCTGTTAGGATTCCAATATCTGTCATTTTTAAGTGA
Protein sequence

>Msa0807140

MMKMELTLLVSLIFMLCSISMLAAEENLEHDQMNLMTYIVHVKKSENVASLQSEDLHSWYHSFLPQTFPHKERMVFSYRKVASGFAVKLTPEEAKSLQAKGEIVSARPERTLELHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGIIDTGIFPLHPSFNDEGMPPPPAKWKGHCEFTGGQVCNNKLIGARNMVKSAIQEPPFENFFHGTHTAAEAAGRFIEDASVFGNAKGVAAGMAPNAHLAIYKVCNDKIGCTESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQNGIFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIVASAKLGNGEEYEGETLFQPKDFSQQLLPLVYPGSFGYGNQAQNQSLCLPGSLKNIDLSGKVVLCDVGNVSSIVKGQEVVNSGGVAMILANSKALGFSTFAIAHVLPAVEVSYVAGLTIKDYINSTYNPTATLIFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNKVPAFDIISGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLLPADIFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYSDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSVLLGSDTQYYTRTLTNVGFANSTYRVELEVPLALGMSVNPSEITFTEVNERVSFSVEFIPQRKENRRNQTFAQGSLTWVSDKHAVRIPISVIFK*