AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0752520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752520 MtrunA17_Chr5g0398351 84.906 901 83 7 1 849 608 1507 0.0 1545
Msa0752520 MtrunA17_Chr5g0398351 96.974 727 22 0 123 849 10 736 0.0 1468
Msa0752520 MtrunA17_Chr5g0398401 87.186 757 87 4 102 849 1 756 0.0 1337
Msa0752520 MtrunA17_Chr5g0398401 85.393 89 13 0 1 89 628 716 7.97e-41 161
Msa0752520 MtrunA17_Chr5g0398241 87.434 756 85 4 102 848 1 755 0.0 1335
Msa0752520 MtrunA17_Chr5g0398241 88.764 89 10 0 1 89 628 716 2.97e-42 165
Msa0752520 MtrunA17_Chr5g0398331 64.939 733 243 8 122 848 28 752 0.0 938
Msa0752520 MtrunA17_Chr5g0398331 49.231 130 51 2 1 116 625 753 4.95e-29 124
Msa0752520 MtrunA17_Chr5g0398311 63.109 759 254 10 105 848 1 748 0.0 928
Msa0752520 MtrunA17_Chr5g0398311 62.921 89 33 0 1 89 621 709 1.30e-27 119
Msa0752520 MtrunA17_Chr4g0057061 57.792 770 297 14 98 848 16 776 0.0 848
Msa0752520 MtrunA17_Chr4g0057061 47.191 89 46 1 1 89 651 738 3.47e-19 92.8
Msa0752520 MtrunA17_Chr7g0262161 45.382 747 362 17 136 846 24 760 0.0 597
Msa0752520 MtrunA17_Chr4g0053781 44.233 737 371 14 138 846 30 754 0.0 573
Msa0752520 MtrunA17_Chr2g0300751 45.455 704 342 12 175 845 77 771 0.0 568
Msa0752520 MtrunA17_Chr2g0300751 39.394 99 54 4 1 97 646 740 2.00e-11 67.8
Msa0752520 MtrunA17_Chr5g0401511 43.646 779 391 18 103 849 1 763 0.0 565
Msa0752520 MtrunA17_Chr4g0037221 43.544 728 359 15 161 846 50 767 0.0 551
Msa0752520 MtrunA17_Chr4g0070391 43.669 774 376 17 107 848 8 753 0.0 548
Msa0752520 MtrunA17_Chr4g0070391 41.304 92 50 3 1 89 624 714 7.95e-11 65.9
Msa0752520 MtrunA17_Chr7g0246461 42.194 775 381 17 109 849 1 742 0.0 542
Msa0752520 MtrunA17_Chr4g0020651 42.092 765 400 17 113 849 10 759 1.66e-179 535
Msa0752520 MtrunA17_Chr8g0344331 42.686 752 374 21 137 845 36 773 7.13e-176 527
Msa0752520 MtrunA17_Chr1g0152771 40.589 781 407 13 102 845 1 761 1.57e-175 525
Msa0752520 MtrunA17_Chr1g0204321 40.025 792 418 14 98 848 3 778 5.65e-175 525
Msa0752520 MtrunA17_Chr8g0344971 42.175 754 374 16 138 849 29 762 2.87e-166 501
Msa0752520 MtrunA17_Chr3g0120521 38.235 748 419 12 136 846 28 769 7.79e-158 480
Msa0752520 MtrunA17_Chr1g0189561 38.550 786 415 20 103 846 1 760 5.98e-157 477
Msa0752520 MtrunA17_Chr4g0057481 42.456 676 353 11 203 848 22 691 1.16e-155 471
Msa0752520 MtrunA17_Chr8g0345971 38.165 752 398 16 139 846 30 758 1.65e-155 473
Msa0752520 MtrunA17_Chr8g0377961 40.496 726 390 14 155 846 57 774 4.35e-155 473
Msa0752520 MtrunA17_Chr4g0076611 39.347 704 384 11 175 846 1 693 6.79e-155 469
Msa0752520 MtrunA17_Chr3g0134621 39.460 778 384 16 103 845 9 734 9.02e-154 468
Msa0752520 MtrunA17_Chr4g0057531 39.894 757 404 14 133 846 28 776 4.56e-153 468
Msa0752520 MtrunA17_Chr4g0057471 40.704 710 376 15 172 846 9 708 5.32e-151 460
Msa0752520 MtrunA17_Chr1g0189251 38.000 750 397 19 139 846 30 753 5.76e-151 461
Msa0752520 MtrunA17_Chr7g0276151 38.824 765 383 21 132 846 26 755 1.58e-147 453
Msa0752520 MtrunA17_Chr8g0345991 38.208 759 384 22 139 846 29 753 7.69e-147 451
Msa0752520 MtrunA17_Chr8g0345981 36.835 752 408 18 139 846 29 757 5.57e-146 449
Msa0752520 MtrunA17_Chr8g0369891 39.742 697 376 15 176 846 74 752 4.45e-145 446
Msa0752520 MtrunA17_Chr7g0248871 36.671 799 407 26 105 846 7 763 8.03e-145 446
Msa0752520 MtrunA17_Chr5g0407701 40.057 699 373 18 176 846 69 749 1.99e-144 444
Msa0752520 MtrunA17_Chr7g0266051 39.604 707 367 24 172 849 32 707 2.69e-140 432
Msa0752520 MtrunA17_Chr8g0354771 38.083 751 409 17 139 846 26 763 6.57e-139 430
Msa0752520 MtrunA17_Chr5g0423261 41.148 627 337 11 249 848 2 623 3.25e-138 424
Msa0752520 MtrunA17_Chr8g0351011 37.980 703 377 18 172 846 80 751 1.18e-137 427
Msa0752520 MtrunA17_Chr2g0303881 37.483 739 383 20 158 846 16 725 8.70e-137 424
Msa0752520 MtrunA17_Chr4g0057491 40.735 626 339 11 250 848 3 623 1.42e-136 420
Msa0752520 MtrunA17_Chr2g0285111 36.082 776 421 16 135 849 27 788 1.54e-136 425
Msa0752520 MtrunA17_Chr4g0057511 41.357 619 329 11 257 848 6 617 2.30e-136 419
Msa0752520 MtrunA17_Chr7g0246451 37.110 706 384 19 172 849 74 747 2.55e-136 423
Msa0752520 MtrunA17_Chr2g0285121 36.761 778 413 18 135 849 24 785 2.74e-135 421
Msa0752520 MtrunA17_Chr3g0136151 39.691 713 376 21 171 843 60 758 3.75e-134 418
Msa0752520 MtrunA17_Chr8g0345961 36.641 786 416 21 107 846 7 756 1.46e-133 416
Msa0752520 MtrunA17_Chr7g0250481 38.306 744 378 25 172 849 72 800 1.79e-133 417
Msa0752520 MtrunA17_Chr4g0026641 37.707 785 414 25 105 846 1 753 3.13e-132 413
Msa0752520 MtrunA17_Chr8g0354741 40.160 625 340 12 244 846 21 633 2.35e-129 401
Msa0752520 MtrunA17_Chr6g0470881 35.969 784 408 22 102 846 1 729 3.05e-129 404
Msa0752520 MtrunA17_Chr6g0470851 35.632 783 412 23 102 846 1 729 1.07e-127 400
Msa0752520 MtrunA17_Chr1g0170081 35.676 754 440 19 107 846 8 730 1.58e-127 400
Msa0752520 MtrunA17_Chr3g0143251 36.629 789 430 23 103 846 1 764 3.29e-127 400
Msa0752520 MtrunA17_Chr1g0146251 36.566 763 425 22 107 846 8 734 7.21e-127 398
Msa0752520 MtrunA17_Chr8g0334521 35.687 779 424 24 99 846 1 733 2.36e-126 397
Msa0752520 MtrunA17_Chr4g0057461 38.863 633 344 14 250 846 3 628 4.04e-126 393
Msa0752520 MtrunA17_Chr3g0079971 36.184 760 419 22 107 841 8 726 6.22e-125 393
Msa0752520 MtrunA17_Chr1g0146271 36.566 763 423 21 107 846 8 732 9.75e-125 392
Msa0752520 MtrunA17_Chr7g0250371 38.260 724 392 24 172 849 73 787 3.92e-124 392
Msa0752520 MtrunA17_Chr7g0250411 36.740 773 422 23 129 846 23 783 4.18e-124 393
Msa0752520 MtrunA17_Chr8g0334491 37.608 694 380 18 172 846 68 727 4.44e-124 390
Msa0752520 MtrunA17_Chr7g0227991 34.699 781 442 21 90 849 3 736 6.08e-123 388
Msa0752520 MtrunA17_Chr7g0250391 37.500 728 391 23 172 849 72 785 2.16e-118 377
Msa0752520 MtrunA17_Chr7g0250331 35.961 812 431 29 116 849 9 809 7.86e-114 366
Msa0752520 MtrunA17_Chr7g0248861 37.898 628 308 19 131 703 22 622 1.48e-109 356
Msa0752520 MtrunA17_Chr7g0248861 47.034 236 107 6 231 451 627 859 1.52e-48 185
Msa0752520 MtrunA17_Chr8g0376841 38.910 532 271 15 172 670 75 585 1.30e-103 332
Msa0752520 MtrunA17_Chr5g0439271 38.811 572 310 13 307 847 40 602 6.72e-103 331
Msa0752520 MtrunA17_Chr4g0071871 32.928 741 410 23 174 844 88 811 8.16e-93 310
Msa0752520 MtrunA17_Chr2g0302951 32.976 746 422 21 172 849 106 841 1.04e-92 310
Msa0752520 MtrunA17_Chr2g0298601 34.060 734 407 24 176 844 90 811 8.03e-91 305
Msa0752520 MtrunA17_Chr5g0447171 37.182 511 269 9 385 849 6 510 2.73e-88 289
Msa0752520 MtrunA17_Chr8g0380961 32.634 763 424 27 161 849 102 848 1.32e-86 294
Msa0752520 MtrunA17_Chr2g0301011 35.436 539 280 13 204 733 4 483 1.19e-84 279
Msa0752520 MtrunA17_Chr4g0075331 30.493 751 412 23 178 847 17 738 5.87e-76 262
Msa0752520 MtrunA17_Chr4g0035881 40.214 373 151 9 311 668 4 319 8.11e-65 220
Msa0752520 MtrunA17_Chr3g0143241 35.318 487 262 16 107 563 8 471 1.83e-64 226
Msa0752520 MtrunA17_Chr7g0261691 37.209 344 192 7 240 563 7 346 2.02e-63 217
Msa0752520 MtrunA17_Chr6g0480721 41.118 304 161 7 179 471 9 305 1.28e-59 214
Msa0752520 MtrunA17_Chr6g0480721 42.034 295 145 6 565 848 321 600 8.63e-59 212
Msa0752520 MtrunA17_Chr7g0261701 40.203 296 162 4 558 846 2 289 5.22e-59 203
Msa0752520 MtrunA17_Chr7g0250461 33.407 452 266 12 129 546 23 473 1.45e-57 205
Msa0752520 MtrunA17_Chr3g0097061 37.082 329 178 9 204 519 4 316 2.47e-54 194
Msa0752520 MtrunA17_Chr3g0097061 52.381 105 43 1 627 731 332 429 5.95e-24 105
Msa0752520 MtrunA17_Chr8g0346361 40.328 305 154 9 556 846 206 496 2.33e-53 193
Msa0752520 MtrunA17_Chr8g0346361 40.845 213 121 3 265 475 6 215 6.49e-41 157
Msa0752520 MtrunA17_Chr7g0250441 45.000 280 137 9 578 846 9 282 7.69e-53 186
Msa0752520 MtrunA17_Chr4g0026651 39.130 322 132 13 190 456 2 314 8.23e-51 181
Msa0752520 MtrunA17_Chr4g0026661 42.023 257 129 7 601 846 12 259 1.31e-50 178
Msa0752520 MtrunA17_Chr2g0301911 33.239 352 204 8 263 604 30 360 8.79e-49 177
Msa0752520 MtrunA17_Chr3g0105461 35.955 356 169 10 107 447 8 319 1.81e-45 167
Msa0752520 MtrunA17_Chr3g0103071 38.077 260 157 4 360 616 1 259 9.29e-45 162
Msa0752520 MtrunA17_Chr2g0312861 40.234 256 133 6 601 846 1 246 2.74e-44 162
Msa0752520 MtrunA17_Chr2g0301031 40.234 256 133 6 601 846 1 246 4.16e-44 160
Msa0752520 MtrunA17_Chr3g0105451 38.043 276 155 6 575 843 9 275 2.12e-41 153
Msa0752520 MtrunA17_Chr5g0398341 72.917 96 26 0 635 730 1 96 7.52e-41 145
Msa0752520 MtrunA17_Chr4g0071191 36.522 230 118 5 558 772 34 250 6.32e-39 145
Msa0752520 MtrunA17_Chr2g0312841 41.143 175 100 2 265 438 11 183 9.25e-39 142
Msa0752520 MtrunA17_Chr2g0301921 40.278 216 114 6 635 846 1 205 3.02e-36 136
Msa0752520 MtrunA17_Chr3g0103061 38.660 194 99 4 172 348 69 259 7.47e-31 122
Msa0752520 MtrunA17_Chr5g0418921 48.201 139 53 4 572 696 3 136 2.61e-28 112
Msa0752520 MtrunA17_Chr5g0436021 42.424 165 78 5 284 438 30 187 1.21e-27 110
Msa0752520 MtrunA17_Chr3g0142981 42.484 153 54 3 303 450 51 174 6.19e-25 103
Msa0752520 MtrunA17_Chr5g0436031 33.939 165 99 3 688 848 23 181 2.77e-22 96.3
Msa0752520 MtrunA17_Chr3g0143231 55.682 88 33 1 585 666 2 89 3.62e-21 88.6
Msa0752520 MtrunA17_Chr2g0301021 23.849 478 248 14 98 562 3 377 1.65e-20 94.7
Msa0752520 MtrunA17_Chr8g0376851 28.161 174 117 3 678 846 1 171 1.24e-18 84.3
Msa0752520 MtrunA17_Chr3g0142971 53.571 84 33 1 585 662 2 85 5.63e-18 79.7
Msa0752520 MtrunA17_Chr7g0248851 34.211 152 86 5 702 846 2 146 2.75e-17 79.7
Msa0752520 MtrunA17_Chr3g0103081 36.054 147 86 6 702 846 2 142 4.93e-17 79.0
Msa0752520 MtrunA17_Chr5g0439281 31.551 187 107 4 103 275 1 180 8.04e-17 79.7
Msa0752520 MtrunA17_Chr3g0143021 38.835 103 62 1 173 274 4 106 3.96e-15 72.4
Msa0752520 MtrunA17_Chr3g0143011 53.571 56 26 0 399 454 2 57 1.89e-12 63.2
Msa0752520 MtrunA17_Chr3g0077671 70.000 40 12 0 627 666 238 277 1.67e-11 66.2
Msa0752520 MtrunA17_Chr4g0057501 34.615 130 72 3 134 251 2 130 2.43e-11 62.0
Msa0752520 MtrunA17_Chr5g0434941 45.333 75 35 2 365 434 1 74 2.75e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752520 AT1G04110.1 42.949 780 388 18 115 849 6 773 0.0 578
Msa0752520 AT5G67360.1 43.355 775 385 17 105 846 1 754 0.0 576
Msa0752520 AT2G05920.1 44.823 734 365 15 138 845 29 748 0.0 557
Msa0752520 AT2G05920.1 43.434 99 50 4 1 97 624 718 4.73e-11 67.0
Msa0752520 AT3G14067.1 42.112 748 386 15 136 846 30 767 0.0 551
Msa0752520 AT3G14240.1 42.344 751 389 15 138 849 27 772 0.0 550
Msa0752520 AT4G34980.1 41.816 727 372 13 158 846 45 758 0.0 543
Msa0752520 AT1G01900.1 41.333 750 384 16 138 849 43 774 1.72e-168 508
Msa0752520 AT5G51750.1 39.304 776 421 15 113 848 11 776 2.36e-166 502
Msa0752520 AT5G59810.1 38.223 743 416 13 138 846 41 774 1.52e-152 466
Msa0752520 AT2G04160.1 38.400 750 411 14 138 846 31 770 7.06e-152 464
Msa0752520 AT5G59090.3 39.942 686 372 17 174 846 68 726 1.72e-143 442
Msa0752520 AT5G03620.1 38.442 796 406 28 102 849 1 760 2.14e-143 442
Msa0752520 AT5G59090.1 39.884 687 373 17 174 846 68 728 1.06e-142 440
Msa0752520 AT5G45650.2 38.422 773 400 18 139 846 27 788 2.44e-142 441
Msa0752520 AT5G45650.1 38.422 773 400 18 139 846 27 788 2.44e-142 441
Msa0752520 AT5G59090.2 39.738 687 369 17 174 846 68 723 3.67e-142 438
Msa0752520 AT5G67090.1 36.623 770 402 20 105 839 1 719 5.02e-142 438
Msa0752520 AT5G59100.1 38.150 692 389 17 172 846 68 737 4.50e-139 430
Msa0752520 AT1G32940.1 38.710 744 409 18 139 846 30 762 2.39e-137 427
Msa0752520 AT5G59120.1 39.074 691 373 16 174 846 67 727 1.94e-136 423
Msa0752520 AT1G32940.4 39.221 719 391 17 163 846 4 711 6.19e-136 422
Msa0752520 AT1G32940.2 39.221 719 391 17 163 846 4 711 6.19e-136 422
Msa0752520 AT4G10520.1 37.419 767 423 19 107 846 8 744 7.34e-135 420
Msa0752520 AT4G10550.1 36.909 783 433 20 104 846 5 766 1.40e-134 420
Msa0752520 AT1G32960.1 37.881 755 400 18 139 846 33 765 1.61e-134 420
Msa0752520 AT3G46840.1 36.884 751 434 17 110 846 10 734 1.42e-133 416
Msa0752520 AT4G10550.3 37.668 746 413 18 139 846 51 782 1.68e-133 417
Msa0752520 AT3G46850.1 37.017 751 434 17 110 846 9 734 3.93e-133 415
Msa0752520 AT4G10550.4 38.796 714 382 18 172 846 13 710 4.24e-133 414
Msa0752520 AT4G10550.2 38.796 714 382 18 172 846 13 710 4.24e-133 414
Msa0752520 AT1G20160.1 36.842 779 429 25 107 846 7 761 5.97e-133 415
Msa0752520 AT1G20160.2 38.873 710 381 22 175 846 28 722 7.14e-133 414
Msa0752520 AT4G10540.1 37.726 774 428 18 110 846 7 763 7.32e-133 415
Msa0752520 AT5G58840.1 37.071 758 395 22 110 846 10 706 2.01e-131 409
Msa0752520 AT4G00230.1 37.659 709 372 19 172 846 71 743 1.86e-130 408
Msa0752520 AT1G32950.1 36.882 789 422 19 103 846 4 761 4.49e-130 408
Msa0752520 AT5G59190.1 38.650 652 358 15 175 811 32 656 1.17e-129 404
Msa0752520 AT5G59130.4 35.829 748 430 16 113 846 14 725 2.57e-129 405
Msa0752520 AT1G66220.1 35.844 770 432 17 108 849 12 747 3.63e-129 405
Msa0752520 AT5G59130.3 37.263 687 385 15 174 846 32 686 6.05e-129 402
Msa0752520 AT1G32950.2 38.858 718 374 17 173 846 14 710 9.32e-129 403
Msa0752520 AT4G10530.1 36.671 769 404 21 114 846 14 735 9.37e-129 404
Msa0752520 AT1G20150.1 37.587 721 384 20 179 849 69 773 2.63e-128 404
Msa0752520 AT5G59130.1 35.829 748 426 17 113 846 14 721 2.93e-128 402
Msa0752520 AT4G10510.3 38.192 741 415 15 139 846 35 765 4.54e-128 403
Msa0752520 AT4G10510.1 38.038 744 418 15 136 846 20 753 5.96e-128 402
Msa0752520 AT4G10510.2 38.952 706 385 14 175 846 1 694 6.57e-128 400
Msa0752520 AT4G21630.1 36.341 787 413 20 107 846 8 753 8.09e-128 402
Msa0752520 AT4G10510.4 39.205 704 386 14 175 846 16 709 1.69e-127 399
Msa0752520 AT5G59130.2 34.940 747 428 16 113 846 14 715 6.28e-127 398
Msa0752520 AT5G58830.1 37.355 688 365 19 174 846 69 705 4.32e-125 393
Msa0752520 AT1G66210.1 35.625 800 414 24 88 846 11 750 1.01e-123 391
Msa0752520 AT5G58820.1 37.645 688 362 20 174 846 65 700 1.70e-123 389
Msa0752520 AT4G21650.1 36.247 778 402 22 120 846 26 760 1.25e-120 383
Msa0752520 AT5G03620.2 41.431 601 294 20 102 668 1 577 2.44e-120 376
Msa0752520 AT5G11940.1 36.028 705 395 13 173 846 73 752 1.98e-118 377
Msa0752520 AT4G21640.1 34.881 797 387 24 104 846 9 727 1.31e-114 366
Msa0752520 AT4G26330.2 35.359 724 403 22 172 848 18 723 1.43e-114 366
Msa0752520 AT5G45640.1 36.572 741 389 23 172 846 26 751 7.19e-114 365
Msa0752520 AT4G21326.1 35.302 711 394 18 172 849 13 690 1.69e-111 357
Msa0752520 AT4G15040.2 36.416 692 387 18 172 846 30 685 4.57e-111 355
Msa0752520 AT4G15040.1 36.416 692 387 18 172 846 30 685 4.57e-111 355
Msa0752520 AT4G26330.1 34.688 738 403 23 172 848 18 737 9.77e-111 356
Msa0752520 AT4G21323.1 35.361 707 395 21 173 846 116 793 1.76e-105 344
Msa0752520 AT1G32970.1 36.866 670 359 18 211 846 83 722 5.21e-105 341
Msa0752520 AT4G00230.2 39.698 529 266 13 172 672 71 574 1.91e-102 330
Msa0752520 AT1G32940.3 38.830 564 304 15 139 668 30 586 1.61e-100 325
Msa0752520 AT5G58840.3 37.347 573 294 15 110 667 10 532 6.86e-99 319
Msa0752520 AT5G44530.1 32.056 783 428 29 145 849 80 836 1.07e-93 313
Msa0752520 AT1G30600.1 31.132 848 462 29 105 849 1 829 5.70e-93 311
Msa0752520 AT4G30020.3 33.603 741 407 26 174 844 84 809 8.00e-91 305
Msa0752520 AT4G30020.1 33.603 741 407 26 174 844 84 809 8.00e-91 305
Msa0752520 AT4G30020.4 33.603 741 407 26 174 844 84 809 8.00e-91 305
Msa0752520 AT4G30020.2 33.603 741 407 26 174 844 84 809 8.00e-91 305
Msa0752520 AT2G19170.1 32.480 742 413 23 174 844 84 808 5.94e-90 302
Msa0752520 AT2G19170.2 32.480 742 413 23 174 844 84 808 5.94e-90 302
Msa0752520 AT5G44530.2 31.312 808 426 31 145 849 80 861 1.65e-89 302
Msa0752520 AT2G39850.1 31.370 730 414 27 175 846 65 765 4.98e-88 296
Msa0752520 AT4G20430.3 30.831 746 431 25 176 849 119 851 3.74e-87 296
Msa0752520 AT4G20430.1 30.831 746 431 25 176 849 119 851 3.74e-87 296
Msa0752520 AT4G20430.2 30.832 733 424 24 176 849 119 827 8.90e-87 294
Msa0752520 AT1G20160.3 36.031 519 292 15 107 602 7 508 9.96e-79 265
Msa0752520 AT1G62340.1 30.723 830 466 32 110 846 16 829 4.36e-74 259
Msa0752520 AT5G58840.2 35.329 501 266 14 110 602 10 460 1.25e-71 244
Msa0752520 AT5G44530.3 31.903 536 285 21 145 617 80 598 3.97e-56 204
Msa0752520 AT1G32980.1 46.237 186 93 4 631 812 3 185 3.72e-39 144
Msa0752520 AT5G59110.1 36.585 164 94 4 691 848 8 167 5.77e-23 97.1

Find 176 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTAAATCAATGCTCTTTA+AGG 0.045855 5_2:-6252576 None:intergenic
ACAGCAACATTGATATTTAA+AGG 0.199488 5_2:+6252809 Msa0752520:CDS
ATATTTAAAGGAACGGTAAT+TGG 0.243779 5_2:+6252821 Msa0752520:CDS
CTATCCCTTTCACTTGGTTT+AGG 0.244036 5_2:+6252230 Msa0752520:CDS
CCCGGATCATTTGCTTTAAC+AGG 0.244524 5_2:-6253199 None:intergenic
TGTAATTCAAGGGTCCTTTC+AGG 0.248048 5_2:-6251735 None:intergenic
CTTGGAAAAGGTGTCATAAT+TGG 0.265555 5_2:+6251822 Msa0752520:CDS
CCTCGGCGGGATTCCTATAT+TGG 0.267483 5_2:+6253123 Msa0752520:CDS
TGCCGCCGCCGCCTGCAAAA+TGG 0.281895 5_2:+6251898 Msa0752520:CDS
CCTTCTTTCTCTATTCTGTT+GGG 0.284617 5_2:+6248662 Msa0752520:CDS
CCTTCTTTCTCTATTCTGTT+GGG 0.284617 5_2:+6253364 Msa0752520:CDS
TGAAGAGATCTGGCTTCTTC+TGG 0.289256 5_2:-6251684 None:intergenic
TGAATTTATACCACAAATAA+AGG 0.290855 5_2:+6253543 Msa0752520:CDS
TGTTCCTTATCTATGTGGTT+TGG 0.297048 5_2:+6253252 Msa0752520:CDS
GTTCCTTATCTATGTGGTTT+GGG 0.298257 5_2:+6253253 Msa0752520:CDS
TAAGAATTCCTGGACTTTCT+TGG 0.302980 5_2:-6252892 None:intergenic
TATATTGCTAAGTGAGCATT+AGG 0.307153 5_2:-6252122 None:intergenic
GGATAATTCAGTTGAGCTTC+TGG 0.309776 5_2:-6248641 None:intergenic
GGATAATTCAGTTGAGCTTC+TGG 0.309776 5_2:-6253343 None:intergenic
TTGCTCAGGGCTCTCTCACT+TGG 0.314858 5_2:+6253587 Msa0752520:CDS
AACTCACACTCCAACATTCT+TGG 0.314948 5_2:+6251761 Msa0752520:CDS
TCCTTCTTTCTCTATTCTGT+TGG 0.316195 5_2:+6248661 Msa0752520:CDS
TCCTTCTTTCTCTATTCTGT+TGG 0.316195 5_2:+6253363 Msa0752520:CDS
TATCCAGGTTCATTTGGATA+TGG 0.319334 5_2:+6252515 Msa0752520:CDS
CTTGAAGTACCTTTGGCTTT+GGG 0.329870 5_2:+6248755 Msa0752520:CDS
CTTGAAGTACCTTTGGCTTT+GGG 0.329870 5_2:+6253457 Msa0752520:CDS
ATGTCTGGTTTAAGAATTCC+TGG 0.338531 5_2:-6252902 None:intergenic
CTTGTGTATCCAGGTTCATT+TGG 0.342215 5_2:+6252509 Msa0752520:CDS
GCTCCATCTTCATCATGATT+TGG 0.354242 5_2:-6251407 None:intergenic
TTGGATTGTATGTTGAGTTT+AGG 0.361307 5_2:-6252787 None:intergenic
ACCTTTCGCTTGAAGAGATC+TGG 0.364696 5_2:-6251694 None:intergenic
AATCAGAAGATTTGCATAGT+TGG 0.366643 5_2:+6251568 Msa0752520:CDS
ATAGCGGCTGGCGACCAATC+AGG 0.369574 5_2:-6253064 None:intergenic
GCAAAAGCACCAATTGCAAT+TGG 0.372818 5_2:-6252275 None:intergenic
AGTTGAACTTGAAGTACCTT+TGG 0.373834 5_2:+6248748 Msa0752520:CDS
AGTTGAACTTGAAGTACCTT+TGG 0.373834 5_2:+6253450 Msa0752520:CDS
ATTCCTGGACTTTCTTGGCT+TGG 0.380426 5_2:-6252887 None:intergenic
ACTTGAAGTACCTTTGGCTT+TGG 0.383368 5_2:+6248754 Msa0752520:CDS
ACTTGAAGTACCTTTGGCTT+TGG 0.383368 5_2:+6253456 Msa0752520:CDS
TGCTCAGGGCTCTCTCACTT+GGG 0.385067 5_2:+6253588 Msa0752520:CDS
TTAAAGAGCATTGATTTAAG+TGG 0.392728 5_2:+6252578 Msa0752520:CDS
AATTGTTGAGAAAAGTCTTT+GGG 0.393026 5_2:-6252479 None:intergenic
GGACAAGAAGTTATAAATTC+AGG 0.404673 5_2:+6252647 Msa0752520:CDS
TTAAATATCAATGTTGCTGT+TGG 0.405977 5_2:-6252806 None:intergenic
TAATTGTTGAGAAAAGTCTT+TGG 0.406108 5_2:-6252480 None:intergenic
AAAAGCCTTTGATCCAATAT+AGG 0.411687 5_2:-6253136 None:intergenic
CCCAACATTAGTCAAGGTTC+TGG 0.411861 5_2:-6248705 None:intergenic
CCCAACATTAGTCAAGGTTC+TGG 0.411861 5_2:-6253407 None:intergenic
TCAAAAGTTCTCACCCTGAT+TGG 0.411956 5_2:+6253050 Msa0752520:CDS
TCCTGTTAAAGCAAATGATC+CGG 0.413205 5_2:+6253198 Msa0752520:CDS
ACCAGAACCTTGACTAATGT+TGG 0.414293 5_2:+6248704 Msa0752520:CDS
ACCAGAACCTTGACTAATGT+TGG 0.414293 5_2:+6253406 Msa0752520:CDS
AAAGTGTGTAATGACAAAAT+TGG 0.426324 5_2:+6252146 Msa0752520:CDS
ACAAGGACTGATTCTGTGCT+TGG 0.426836 5_2:-6252541 None:intergenic
AAGGATCCAAGGAGCTTCAT+TGG 0.426872 5_2:-6252366 None:intergenic
AGATAAGGAACATAATCTTC+TGG 0.433786 5_2:-6253241 None:intergenic
ATTCTTAAACCAGACATCAT+TGG 0.438516 5_2:+6252908 Msa0752520:CDS
TTTGAAGACCCAATTGCAAT+TGG 0.438577 5_2:+6252266 Msa0752520:CDS
CCATTTGAGAACTTCTTCCA+TGG 0.446599 5_2:+6252011 Msa0752520:CDS
ACTCACACTCCAACATTCTT+GGG 0.447446 5_2:+6251762 Msa0752520:CDS
GCAATTGGGTCTTCAAAGAA+TGG 0.453919 5_2:-6252260 None:intergenic
CCAGAACCTTGACTAATGTT+GGG 0.456402 5_2:+6248705 Msa0752520:CDS
CCAGAACCTTGACTAATGTT+GGG 0.456402 5_2:+6253407 Msa0752520:CDS
TCTTACCGCAAAGTAGCCTC+TGG 0.458063 5_2:+6251642 Msa0752520:CDS
TGTGAGTTGTATGTAATTCA+AGG 0.467665 5_2:-6251746 None:intergenic
CGGCAGCGGTGTGTGTTCCA+TGG 0.467665 5_2:-6252028 None:intergenic
ATTCCAAATCATGATGAAGA+TGG 0.468472 5_2:+6251404 Msa0752520:CDS
GCATCAGCAAAGCTAGGAAA+TGG 0.468791 5_2:+6252425 Msa0752520:CDS
TCAATGCTCTTTAAGGATCC+TGG 0.469019 5_2:-6252569 None:intergenic
CTCTCTCCAATGAAGCTCCT+TGG 0.469621 5_2:+6252360 Msa0752520:CDS
CTTGCAAACTCAGAAGCACT+TGG 0.472374 5_2:+6252686 Msa0752520:CDS
CATTGAAAGATGGATGTAAA+GGG 0.473350 5_2:-6251866 None:intergenic
GTATGCAACAATAAACTCAT+AGG 0.473737 5_2:+6251951 Msa0752520:CDS
AGTTGCTCTGCTGCAAACTC+TGG 0.483255 5_2:+6252323 Msa0752520:CDS
TCTTCCTGCAGCCTCGGCAG+CGG 0.484108 5_2:-6252042 None:intergenic
ACTCATAGGTGCAAGAAACT+TGG 0.487116 5_2:+6251965 Msa0752520:CDS
CTTCTTTCTCTATTCTGTTG+GGG 0.489382 5_2:+6248663 Msa0752520:CDS
CTTCTTTCTCTATTCTGTTG+GGG 0.489382 5_2:+6253365 Msa0752520:CDS
CCATGGAAGAAGTTCTCAAA+TGG 0.489458 5_2:-6252011 None:intergenic
CAAAAGCACCAATTGCAATT+GGG 0.494429 5_2:-6252274 None:intergenic
AATCAGTCCTTGTGTTTACC+AGG 0.497906 5_2:+6252551 Msa0752520:CDS
ACACCAGGACCAATGATGTC+TGG 0.498397 5_2:-6252917 None:intergenic
TTATTGCCACTTGTGTATCC+AGG 0.499783 5_2:+6252500 Msa0752520:CDS
GTTGAGAAAAGTCTTTGGGT+TGG 0.500305 5_2:-6252475 None:intergenic
TTGGAGAGAGTGCTGTATCC+AGG 0.503269 5_2:-6252347 None:intergenic
CATATCAATGTTGGCTGCAG+AGG 0.503595 5_2:+6251467 Msa0752520:CDS
TCAGTGAATGTTATTTCACT+TGG 0.504064 5_2:-6248791 None:intergenic
TCAGTGAATGTTATTTCACT+TGG 0.504064 5_2:-6253493 None:intergenic
CCAGAAATAATGTCAAAAGC+TGG 0.510416 5_2:-6252983 None:intergenic
AACATTGATATTTAAAGGAA+CGG 0.510703 5_2:+6252814 Msa0752520:CDS
CTAATACTCTCAACCTCGGC+GGG 0.512613 5_2:+6253110 Msa0752520:CDS
ATCAATTGTGCTGGCACCAA+CGG 0.512655 5_2:-6252390 None:intergenic
TGTGAGGAAAAGTTTGTGGA+AGG 0.515063 5_2:-6251602 None:intergenic
GATGTTCTATCCCTTTCACT+TGG 0.516045 5_2:+6252224 Msa0752520:CDS
TCTTTGTGAGGAAAAGTTTG+TGG 0.517275 5_2:-6251606 None:intergenic
TCATTGAAAGATGGATGTAA+AGG 0.517381 5_2:-6251867 None:intergenic
TATGAATCTTCCTGCAGCCT+CGG 0.517777 5_2:-6252048 None:intergenic
TGTTTCAGACCCAAGAATGT+TGG 0.519200 5_2:-6251771 None:intergenic
TCTGCTGCAAACTCTGGTCC+TGG 0.523412 5_2:+6252329 Msa0752520:CDS
GAGAACCTAAACCAAGTGAA+AGG 0.523752 5_2:-6252235 None:intergenic
AAAACCATTCTTTCTTTGTG+AGG 0.524993 5_2:-6251618 None:intergenic
AAAGTAGTGCTGTGTGATGT+AGG 0.529593 5_2:+6252602 Msa0752520:CDS
GATTATGTTCCTTATCTATG+TGG 0.530409 5_2:+6253247 Msa0752520:CDS
TGTCTGATAAACATGCTGTT+AGG 0.536213 5_2:+6253611 Msa0752520:CDS
TGCAAACCCAACATTAGTCA+AGG 0.536374 5_2:-6248711 None:intergenic
TGCAAACCCAACATTAGTCA+AGG 0.536374 5_2:-6253413 None:intergenic
GGATTCCTATATTGGATCAA+AGG 0.537265 5_2:+6253131 Msa0752520:CDS
CCGCCGCCTGCAAAATGGAA+AGG 0.539354 5_2:+6251903 Msa0752520:CDS
GGACCAAGCCAAGAAAGTCC+AGG 0.539803 5_2:+6252884 Msa0752520:CDS
AAGTGCTATATTAGCTGCAA+TGG 0.539877 5_2:+6252178 Msa0752520:CDS
AAACCAGACATCATTGGTCC+TGG 0.540623 5_2:+6252914 Msa0752520:CDS
AGCGATGATAACCTTGGAAA+AGG 0.541813 5_2:+6251810 Msa0752520:CDS
TTGTGCTGGCACCAACGGTA+AGG 0.544386 5_2:-6252385 None:intergenic
AAAGGCCATTGTGAATTCAC+TGG 0.549399 5_2:+6251921 Msa0752520:CDS
TGAAACAAGGACAAGGATTG+TGG 0.550041 5_2:+6251787 Msa0752520:CDS
CAAATCCAGAGGCTACTTTG+CGG 0.550052 5_2:-6251647 None:intergenic
AAGTTTGTGGAAGGAATGAA+TGG 0.550124 5_2:-6251593 None:intergenic
AGAACCTAAACCAAGTGAAA+GGG 0.551042 5_2:-6252234 None:intergenic
ATTCCTTCGTCATTGAAAGA+TGG 0.552371 5_2:-6251876 None:intergenic
TTTCCATATCCAAATGAACC+TGG 0.553708 5_2:-6252518 None:intergenic
TGCTGCATAACATGAAAATG+AGG 0.554619 5_2:-6251446 None:intergenic
TAGCGGCTGGCGACCAATCA+GGG 0.554928 5_2:-6253063 None:intergenic
CAAGTGCTTCTGAGTTTGCA+AGG 0.557071 5_2:-6252685 None:intergenic
TGGAACACACACCGCTGCCG+AGG 0.557292 5_2:+6252031 Msa0752520:CDS
ATTGTAGCATCAGCAAAGCT+AGG 0.558116 5_2:+6252419 Msa0752520:CDS
TAAAGGTGTAGCAGCAGGAA+TGG 0.559191 5_2:+6252097 Msa0752520:CDS
AATGCTAAAGGTGTAGCAGC+AGG 0.559203 5_2:+6252092 Msa0752520:CDS
TAACCCAAACCACATAGATA+AGG 0.560041 5_2:-6253256 None:intergenic
CCCAACAGAATAGAGAAAGA+AGG 0.564665 5_2:-6248662 None:intergenic
CCCAACAGAATAGAGAAAGA+AGG 0.564665 5_2:-6253364 None:intergenic
CATCCATCTTTCAATGACGA+AGG 0.565510 5_2:+6251873 Msa0752520:CDS
CCTGTTAAAGCAAATGATCC+GGG 0.567444 5_2:+6253199 Msa0752520:CDS
ATGTCTTGTCCTCACCTAAG+TGG 0.567792 5_2:+6253013 Msa0752520:CDS
GCATAACTCACTTCAACTGC+AGG 0.568754 5_2:-6252740 None:intergenic
ATGGATATTGCTATTGAAGA+TGG 0.574799 5_2:+6252197 Msa0752520:CDS
GTGTCAACATTCTAGCTGCG+TGG 0.576219 5_2:+6252936 Msa0752520:CDS
AGATTGAAGTTATTGTTCAG+TGG 0.577992 5_2:+6248588 Msa0752520:CDS
AGATTGAAGTTATTGTTCAG+TGG 0.577992 5_2:+6253290 Msa0752520:CDS
GCACCAACGGTAAGGATCCA+AGG 0.581358 5_2:-6252377 None:intergenic
CACAAATAAAGGAAAACAGA+AGG 0.583247 5_2:+6253554 Msa0752520:CDS
TGTCAACATTCTAGCTGCGT+GGG 0.583917 5_2:+6252937 Msa0752520:CDS
GCTCCTTGGATCCTTACCGT+TGG 0.585586 5_2:+6252374 Msa0752520:CDS
AATGTCTCAAGTATTGTGAA+AGG 0.585598 5_2:+6252626 Msa0752520:CDS
GCCAGATCTCTTCAAGCGAA+AGG 0.587192 5_2:+6251693 Msa0752520:CDS
GTTGAAGTGAGTTATGCAGC+TGG 0.594571 5_2:+6252746 Msa0752520:CDS
CCAGTAGCGAAAATATCAGC+CGG 0.595288 5_2:-6253160 None:intergenic
GGAAATGGTGAAGAATATGA+AGG 0.595715 5_2:+6252440 Msa0752520:CDS
TCAATGCAGCAATACCACTT+AGG 0.599841 5_2:-6253027 None:intergenic
ACATTCTTGGGTCTGAAACA+AGG 0.600413 5_2:+6251774 Msa0752520:CDS
GTTATGCAGCATATCAATGT+TGG 0.600953 5_2:+6251458 Msa0752520:CDS
GTGAGTTGTATGTAATTCAA+GGG 0.606005 5_2:-6251745 None:intergenic
CATAATTGGTATCATAGACA+CGG 0.608090 5_2:+6251836 Msa0752520:CDS
GGCCATTGTGAATTCACTGG+AGG 0.616635 5_2:+6251924 Msa0752520:CDS
ATTCACTGAGGTAAATGAGA+AGG 0.616902 5_2:+6248805 Msa0752520:CDS
ATTCACTGAGGTAAATGAGA+AGG 0.616902 5_2:+6253507 Msa0752520:CDS
TTGTGTCAGCAAGACCTGAA+AGG 0.617538 5_2:+6251721 Msa0752520:CDS
TGAATATCATAAACAAGACC+CGG 0.618601 5_2:-6253217 None:intergenic
GCCATTGTGAATTCACTGGA+GGG 0.621432 5_2:+6251925 Msa0752520:CDS
TTGTGGAGCGATGATAACCT+TGG 0.627357 5_2:+6251804 Msa0752520:CDS
TGGAAGAAGTTCTCAAATGG+AGG 0.628098 5_2:-6252008 None:intergenic
ACTGCTAATACTCTCAACCT+CGG 0.640806 5_2:+6253106 Msa0752520:CDS
CAAGAAGTTATAAATTCAGG+TGG 0.648225 5_2:+6252650 Msa0752520:CDS
ACACTCATACCCAAAGCCAA+AGG 0.650995 5_2:-6248764 None:intergenic
ACACTCATACCCAAAGCCAA+AGG 0.650995 5_2:-6253466 None:intergenic
ATAATTGGTATCATAGACAC+GGG 0.652269 5_2:+6251837 Msa0752520:CDS
AATGAACCTGGATACACAAG+TGG 0.660659 5_2:-6252506 None:intergenic
TTGGGTCTGAAACAAGGACA+AGG 0.664078 5_2:+6251780 Msa0752520:CDS
GCAGCTAGAATGTTGACACC+AGG 0.666478 5_2:-6252932 None:intergenic
GCCCTCCAGTGAATTCACAA+TGG 0.681972 5_2:-6251926 None:intergenic
TAAGGATCCTGGTAAACACA+AGG 0.684953 5_2:-6252558 None:intergenic
CCAATATAGGAATCCCGCCG+AGG 0.688534 5_2:-6253123 None:intergenic
GCTAATACTCTCAACCTCGG+CGG 0.691415 5_2:+6253109 Msa0752520:CDS
GCAGCAATACCACTTAGGTG+AGG 0.726862 5_2:-6253022 None:intergenic
TAGCTTCACAGCAAATCCAG+AGG 0.735330 5_2:-6251658 None:intergenic
AAGTGAAATAACATTCACTG+AGG 0.755767 5_2:+6248793 Msa0752520:CDS
AAGTGAAATAACATTCACTG+AGG 0.755767 5_2:+6253495 Msa0752520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAGATAAACAATAAAAA+TGG + chr5_2:6250140-6250159 Msa0752520:intron 10.0%
!! ATATTATGTTCAAGAAATAA+CGG + chr5_2:6248981-6249000 Msa0752520:intron 15.0%
!!! AATGAAATATATTATTGGTT+GGG + chr5_2:6249005-6249024 Msa0752520:intron 15.0%
!! AAAATAACATATCATACTAT+TGG - chr5_2:6249095-6249114 None:intergenic 15.0%
!! TAAATTTAACATAGGAAATA+TGG - chr5_2:6249235-6249254 None:intergenic 15.0%
!!! GCTTTAAATAAATTTAACAT+AGG - chr5_2:6249243-6249262 None:intergenic 15.0%
!!! AAAGAAATTTAAAGTATCTA+TGG + chr5_2:6249471-6249490 Msa0752520:intron 15.0%
!! TTTGTGAAATAACAATATTT+AGG + chr5_2:6250180-6250199 Msa0752520:intron 15.0%
!! TAAACTGAACTAAATTTAAA+CGG + chr5_2:6250395-6250414 Msa0752520:intron 15.0%
!!! GGAATGATAAAATATTTTTT+TGG - chr5_2:6251187-6251206 None:intergenic 15.0%
!! ATATTAATTGCTTATAACAT+TGG - chr5_2:6251291-6251310 None:intergenic 15.0%
!! TGTTATAAGCAATTAATATA+TGG + chr5_2:6251292-6251311 Msa0752520:intron 15.0%
!! TGAATTTATACCACAAATAA+AGG + chr5_2:6248841-6248860 Msa0752520:intron 20.0%
!!! ATTTTCAAGTGATATATGAA+GGG + chr5_2:6248947-6248966 Msa0752520:intron 20.0%
!! TATTATGTTCAAGAAATAAC+GGG + chr5_2:6248982-6249001 Msa0752520:intron 20.0%
!! GAATGAAATATATTATTGGT+TGG + chr5_2:6249004-6249023 Msa0752520:intron 20.0%
!!! ATGAAATATATTATTGGTTG+GGG + chr5_2:6249006-6249025 Msa0752520:intron 20.0%
!!! TTCTTTGTACAAGTAATTTT+TGG + chr5_2:6249063-6249082 Msa0752520:intron 20.0%
!! ATTTATAGCTTATACGAAAA+TGG + chr5_2:6249972-6249991 Msa0752520:intron 20.0%
!! TCATGAATAAAATCTTTCAA+AGG - chr5_2:6250719-6250738 None:intergenic 20.0%
!!! TGAAAGATTTTATTCATGAA+TGG + chr5_2:6250720-6250739 Msa0752520:intron 20.0%
!!! ATATTTTACAACCATTTCTA+GGG - chr5_2:6250904-6250923 None:intergenic 20.0%
!!! AATATTTTACAACCATTTCT+AGG - chr5_2:6250905-6250924 None:intergenic 20.0%
!!! TAATTTGTATGGATTTGTTA+TGG - chr5_2:6251112-6251131 None:intergenic 20.0%
!!! ATATTTGGTGTTAATTTGTA+TGG - chr5_2:6251123-6251142 None:intergenic 20.0%
!! AATTAACACCAAATATATAG+CGG + chr5_2:6251127-6251146 Msa0752520:intron 20.0%
!! ATAGGAATGATAAGAAAAAA+AGG - chr5_2:6251208-6251227 None:intergenic 20.0%
!! AACATTGATATTTAAAGGAA+CGG + chr5_2:6252814-6252833 Msa0752520:CDS 20.0%
!! TGAATTTATACCACAAATAA+AGG + chr5_2:6248841-6248860 Msa0752520:intron 20.0%
!! ACTTAAAAATGACAGATATT+GGG - chr5_2:6253639-6253658 None:intergenic 20.0%
!!! CATTTTCAAGTGATATATGA+AGG + chr5_2:6248946-6248965 Msa0752520:intron 25.0%
! ACGGGAATGAAATATATTAT+TGG + chr5_2:6249000-6249019 Msa0752520:intron 25.0%
! TTTAACATAGGAAATATGGA+AGG - chr5_2:6249231-6249250 None:intergenic 25.0%
!! TTTTGTGAGATGAATTTTCA+AGG + chr5_2:6249434-6249453 Msa0752520:intron 25.0%
!!! CTTATTTTCATAAGCTCTTT+AGG + chr5_2:6249933-6249952 Msa0752520:intron 25.0%
!!! TTTTTTTTCTTCTACTGTGA+CGG - chr5_2:6250297-6250316 None:intergenic 25.0%
! AATAAATTGATACACTTTGG+AGG - chr5_2:6250663-6250682 None:intergenic 25.0%
! CTCAATAAATTGATACACTT+TGG - chr5_2:6250666-6250685 None:intergenic 25.0%
!!! CATTACACTTTTTCTCTAAA+AGG + chr5_2:6250765-6250784 Msa0752520:intron 25.0%
! ATATATTTGGAAAGTTGCAA+TGG - chr5_2:6250801-6250820 None:intergenic 25.0%
!! TGTATGTTTGCTTTCAATTT+TGG - chr5_2:6250868-6250887 None:intergenic 25.0%
!!! TATTTTACAACCATTTCTAG+GGG - chr5_2:6250903-6250922 None:intergenic 25.0%
!! ACATAAAACTTGTCTTTTTG+TGG + chr5_2:6250980-6250999 Msa0752520:intron 25.0%
!!! ACATTGGTACATCTATTTTT+CGG - chr5_2:6251057-6251076 None:intergenic 25.0%
! ATTAACACCAAATATATAGC+GGG + chr5_2:6251128-6251147 Msa0752520:intron 25.0%
! ATGTTTGTTTGATATCCAAT+TGG - chr5_2:6251318-6251337 None:intergenic 25.0%
! AAAGTGTGTAATGACAAAAT+TGG + chr5_2:6252146-6252165 Msa0752520:CDS 25.0%
!! AATTTTTCTATCAATTGTGC+TGG - chr5_2:6252402-6252421 None:intergenic 25.0%
! AATTGTTGAGAAAAGTCTTT+GGG - chr5_2:6252482-6252501 None:intergenic 25.0%
! TAATTGTTGAGAAAAGTCTT+TGG - chr5_2:6252483-6252502 None:intergenic 25.0%
! ACTTAAATCAATGCTCTTTA+AGG - chr5_2:6252579-6252598 None:intergenic 25.0%
!!! TTAAAGAGCATTGATTTAAG+TGG + chr5_2:6252578-6252597 Msa0752520:CDS 25.0%
! TTAAATATCAATGTTGCTGT+TGG - chr5_2:6252809-6252828 None:intergenic 25.0%
! ACAGCAACATTGATATTTAA+AGG + chr5_2:6252809-6252828 Msa0752520:CDS 25.0%
! ATATTTAAAGGAACGGTAAT+TGG + chr5_2:6252821-6252840 Msa0752520:CDS 25.0%
! GAAGAAAAATAAACAACAGA+AGG - chr5_2:6252860-6252879 None:intergenic 25.0%
!!! GTTGTTTATTTTTCTTCAAG+AGG + chr5_2:6252863-6252882 Msa0752520:CDS 25.0%
! CACTTAAAAATGACAGATAT+TGG - chr5_2:6253640-6253659 None:intergenic 25.0%
AGATTGAAGTTATTGTTCAG+TGG + chr5_2:6248588-6248607 Msa0752520:CDS 30.0%
!! TCAGTGAATGTTATTTCACT+TGG - chr5_2:6248794-6248813 None:intergenic 30.0%
AAGTGAAATAACATTCACTG+AGG + chr5_2:6248793-6248812 Msa0752520:CDS 30.0%
!! CTTCTGTTTTCCTTTATTTG+TGG - chr5_2:6248854-6248873 None:intergenic 30.0%
CACAAATAAAGGAAAACAGA+AGG + chr5_2:6248852-6248871 Msa0752520:intron 30.0%
CACTTGAAAATGACTGATAT+TGG - chr5_2:6248938-6248957 None:intergenic 30.0%
!!! GTACAAGTAATTTTTGGCAT+TGG + chr5_2:6249069-6249088 Msa0752520:intron 30.0%
GTGTAAATTTCACATATGAG+AGG + chr5_2:6249180-6249199 Msa0752520:intron 30.0%
CAGAGGAATAAAATCAAGAA+TGG - chr5_2:6249208-6249227 None:intergenic 30.0%
TCTTCAATATGACTAACCAA+AGG + chr5_2:6249317-6249336 Msa0752520:intron 30.0%
ATGGAAGCAGTTAAAAATGT+TGG + chr5_2:6249490-6249509 Msa0752520:intron 30.0%
AGCAGTTAAAAATGTTGGAT+TGG + chr5_2:6249495-6249514 Msa0752520:intron 30.0%
! GATAACAAAGTATTCCATCA+TGG + chr5_2:6249622-6249641 Msa0752520:intron 30.0%
! TTTGATAGTTCTCTTTACTG+TGG - chr5_2:6249669-6249688 None:intergenic 30.0%
ACTATCAAAGTGTGTATTCA+AGG + chr5_2:6249680-6249699 Msa0752520:intron 30.0%
GAACAATTAGTTGTGTGAAA+TGG - chr5_2:6249730-6249749 None:intergenic 30.0%
AGACTGTTTGAAAGAGTTTA+TGG + chr5_2:6249876-6249895 Msa0752520:intron 30.0%
TTAAATTGCACTAGGTAGTT+AGG - chr5_2:6250089-6250108 None:intergenic 30.0%
! AAAATGGCATCTTTAAGAGA+TGG + chr5_2:6250156-6250175 Msa0752520:intron 30.0%
! AAATGGCATCTTTAAGAGAT+GGG + chr5_2:6250157-6250176 Msa0752520:intron 30.0%
! GTATTTAATTTATCCCCTTC+AGG + chr5_2:6250436-6250455 Msa0752520:intron 30.0%
ATTGAGAAACTTATGTCCTT+TGG + chr5_2:6250680-6250699 Msa0752520:intron 30.0%
TGCAAGCTAAAAACAACATA+TGG + chr5_2:6251011-6251030 Msa0752520:intron 30.0%
AAACAACATATGGCAATGTT+AGG + chr5_2:6251021-6251040 Msa0752520:intron 30.0%
AACAACATATGGCAATGTTA+GGG + chr5_2:6251022-6251041 Msa0752520:intron 30.0%
!! CATTGGTACATCTATTTTTC+GGG - chr5_2:6251056-6251075 None:intergenic 30.0%
!! GCTAATTAGTCTTCAATGAA+GGG - chr5_2:6251234-6251253 None:intergenic 30.0%
GCTTATAACATTGGAAAACA+AGG - chr5_2:6251282-6251301 None:intergenic 30.0%
GCAATTAATATATGGCCAAT+TGG + chr5_2:6251300-6251319 Msa0752520:intron 30.0%
ATTCCAAATCATGATGAAGA+TGG + chr5_2:6251404-6251423 Msa0752520:CDS 30.0%
AATCAGAAGATTTGCATAGT+TGG + chr5_2:6251568-6251587 Msa0752520:CDS 30.0%
! TTTTCCTCACAAAGAAAGAA+TGG + chr5_2:6251614-6251633 Msa0752520:CDS 30.0%
AAAACCATTCTTTCTTTGTG+AGG - chr5_2:6251621-6251640 None:intergenic 30.0%
GTGAGTTGTATGTAATTCAA+GGG - chr5_2:6251748-6251767 None:intergenic 30.0%
TGTGAGTTGTATGTAATTCA+AGG - chr5_2:6251749-6251768 None:intergenic 30.0%
CATAATTGGTATCATAGACA+CGG + chr5_2:6251836-6251855 Msa0752520:CDS 30.0%
ATAATTGGTATCATAGACAC+GGG + chr5_2:6251837-6251856 Msa0752520:CDS 30.0%
CATTGAAAGATGGATGTAAA+GGG - chr5_2:6251869-6251888 None:intergenic 30.0%
TCATTGAAAGATGGATGTAA+AGG - chr5_2:6251870-6251889 None:intergenic 30.0%
GTATGCAACAATAAACTCAT+AGG + chr5_2:6251951-6251970 Msa0752520:CDS 30.0%
! ATAGAAGATGCAAGTGTTTT+TGG + chr5_2:6252068-6252087 Msa0752520:CDS 30.0%
!!! AGTGTTTTTGGTAATGCTAA+AGG + chr5_2:6252080-6252099 Msa0752520:CDS 30.0%
TATATTGCTAAGTGAGCATT+AGG - chr5_2:6252125-6252144 None:intergenic 30.0%
! ATGGATATTGCTATTGAAGA+TGG + chr5_2:6252197-6252216 Msa0752520:CDS 30.0%
! AATGTCTCAAGTATTGTGAA+AGG + chr5_2:6252626-6252645 Msa0752520:CDS 30.0%
GGACAAGAAGTTATAAATTC+AGG + chr5_2:6252647-6252666 Msa0752520:CDS 30.0%
CAAGAAGTTATAAATTCAGG+TGG + chr5_2:6252650-6252669 Msa0752520:CDS 30.0%
TTGGATTGTATGTTGAGTTT+AGG - chr5_2:6252790-6252809 None:intergenic 30.0%
ATTCTTAAACCAGACATCAT+TGG + chr5_2:6252908-6252927 Msa0752520:CDS 30.0%
!!! CATGATTGCTGATTTTATAG+CGG - chr5_2:6253083-6253102 None:intergenic 30.0%
AAAAGCCTTTGATCCAATAT+AGG - chr5_2:6253139-6253158 None:intergenic 30.0%
TGAATATCATAAACAAGACC+CGG - chr5_2:6253220-6253239 None:intergenic 30.0%
AGATAAGGAACATAATCTTC+TGG - chr5_2:6253244-6253263 None:intergenic 30.0%
GATTATGTTCCTTATCTATG+TGG + chr5_2:6253247-6253266 Msa0752520:CDS 30.0%
AGATTGAAGTTATTGTTCAG+TGG + chr5_2:6248588-6248607 Msa0752520:CDS 30.0%
!! TCAGTGAATGTTATTTCACT+TGG - chr5_2:6248794-6248813 None:intergenic 30.0%
AAGTGAAATAACATTCACTG+AGG + chr5_2:6248793-6248812 Msa0752520:CDS 30.0%
!! CTTCTGTTTTCCTTTATTTG+TGG - chr5_2:6248854-6248873 None:intergenic 30.0%
CACAAATAAAGGAAAACAGA+AGG + chr5_2:6248852-6248871 Msa0752520:intron 30.0%
TCCTTCTTTCTCTATTCTGT+TGG + chr5_2:6248661-6248680 Msa0752520:CDS 35.0%
CCTTCTTTCTCTATTCTGTT+GGG + chr5_2:6248662-6248681 Msa0752520:CDS 35.0%
CTTCTTTCTCTATTCTGTTG+GGG + chr5_2:6248663-6248682 Msa0752520:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG + chr5_2:6248748-6248767 Msa0752520:CDS 35.0%
ATTCACTGAGGTAAATGAGA+AGG + chr5_2:6248805-6248824 Msa0752520:CDS 35.0%
! AAGGAATCAAACTTTTGCTC+AGG + chr5_2:6248871-6248890 Msa0752520:intron 35.0%
! AGGAATCAAACTTTTGCTCA+GGG + chr5_2:6248872-6248891 Msa0752520:intron 35.0%
TGTCTGATAAACATGCTGTT+AGG + chr5_2:6248909-6248928 Msa0752520:intron 35.0%
AAGTGATATATGAAGGGAGA+GGG + chr5_2:6248953-6248972 Msa0752520:intron 35.0%
TCAATATGACTAACCAAAGG+AGG + chr5_2:6249320-6249339 Msa0752520:intron 35.0%
CAATATGACTAACCAAAGGA+GGG + chr5_2:6249321-6249340 Msa0752520:intron 35.0%
AATATGACTAACCAAAGGAG+GGG + chr5_2:6249322-6249341 Msa0752520:intron 35.0%
CATCTCACAAAAGTTATGCT+AGG - chr5_2:6249426-6249445 None:intergenic 35.0%
! ACAAGTTTAGAATGCCATGA+TGG - chr5_2:6249639-6249658 None:intergenic 35.0%
ACTACCTAGTGCAATTTAAC+CGG + chr5_2:6250090-6250109 Msa0752520:intron 35.0%
!! TTGAGATGAGCAAGTTGATT+TGG + chr5_2:6250207-6250226 Msa0752520:intron 35.0%
!! TGAGATGAGCAAGTTGATTT+GGG + chr5_2:6250208-6250227 Msa0752520:intron 35.0%
AAACTTATGTCCTTTGGTGA+AGG + chr5_2:6250686-6250705 Msa0752520:intron 35.0%
GAATGGTTACATTGCTTCAA+TGG + chr5_2:6250737-6250756 Msa0752520:intron 35.0%
CACACAATCTTCCTAATCAA+TGG + chr5_2:6250836-6250855 Msa0752520:intron 35.0%
! TTTGGAAGAGTCCATTGATT+AGG - chr5_2:6250850-6250869 None:intergenic 35.0%
AAGTTCAAATCCCCTAGAAA+TGG + chr5_2:6250890-6250909 Msa0752520:intron 35.0%
AGTAATGCCCGCTATATATT+TGG - chr5_2:6251138-6251157 None:intergenic 35.0%
!! GGCTAATTAGTCTTCAATGA+AGG - chr5_2:6251235-6251254 None:intergenic 35.0%
AAATACACATGCATGTCACT+AGG + chr5_2:6251347-6251366 Msa0752520:intron 35.0%
TGCTGCATAACATGAAAATG+AGG - chr5_2:6251449-6251468 None:intergenic 35.0%
GTTATGCAGCATATCAATGT+TGG + chr5_2:6251458-6251477 Msa0752520:CDS 35.0%
AAGTTTGTGGAAGGAATGAA+TGG - chr5_2:6251596-6251615 None:intergenic 35.0%
TCTTTGTGAGGAAAAGTTTG+TGG - chr5_2:6251609-6251628 None:intergenic 35.0%
! CAATTATGACACCTTTTCCA+AGG - chr5_2:6251824-6251843 None:intergenic 35.0%
!! CTTGGAAAAGGTGTCATAAT+TGG + chr5_2:6251822-6251841 Msa0752520:CDS 35.0%
ATTCCTTCGTCATTGAAAGA+TGG - chr5_2:6251879-6251898 None:intergenic 35.0%
AAGTGCTATATTAGCTGCAA+TGG + chr5_2:6252178-6252197 Msa0752520:CDS 35.0%
AGAACCTAAACCAAGTGAAA+GGG - chr5_2:6252237-6252256 None:intergenic 35.0%
TTTGAAGACCCAATTGCAAT+TGG + chr5_2:6252266-6252285 Msa0752520:CDS 35.0%
!! CAAAAGCACCAATTGCAATT+GGG - chr5_2:6252277-6252296 None:intergenic 35.0%
GGAAATGGTGAAGAATATGA+AGG + chr5_2:6252440-6252459 Msa0752520:CDS 35.0%
TATCCAGGTTCATTTGGATA+TGG + chr5_2:6252515-6252534 Msa0752520:CDS 35.0%
TTTCCATATCCAAATGAACC+TGG - chr5_2:6252521-6252540 None:intergenic 35.0%
TAAGAATTCCTGGACTTTCT+TGG - chr5_2:6252895-6252914 None:intergenic 35.0%
! ATGTCTGGTTTAAGAATTCC+TGG - chr5_2:6252905-6252924 None:intergenic 35.0%
CCAGAAATAATGTCAAAAGC+TGG - chr5_2:6252986-6253005 None:intergenic 35.0%
! CCAGCTTTTGACATTATTTC+TGG + chr5_2:6252983-6253002 Msa0752520:CDS 35.0%
GGATTCCTATATTGGATCAA+AGG + chr5_2:6253131-6253150 Msa0752520:CDS 35.0%
TCCTGTTAAAGCAAATGATC+CGG + chr5_2:6253198-6253217 Msa0752520:CDS 35.0%
TGTTCCTTATCTATGTGGTT+TGG + chr5_2:6253252-6253271 Msa0752520:CDS 35.0%
GTTCCTTATCTATGTGGTTT+GGG + chr5_2:6253253-6253272 Msa0752520:CDS 35.0%
TAACCCAAACCACATAGATA+AGG - chr5_2:6253259-6253278 None:intergenic 35.0%
TCCTTCTTTCTCTATTCTGT+TGG + chr5_2:6248661-6248680 Msa0752520:CDS 35.0%
CCTTCTTTCTCTATTCTGTT+GGG + chr5_2:6248662-6248681 Msa0752520:CDS 35.0%
CTTCTTTCTCTATTCTGTTG+GGG + chr5_2:6248663-6248682 Msa0752520:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG + chr5_2:6248748-6248767 Msa0752520:CDS 35.0%
ATTCACTGAGGTAAATGAGA+AGG + chr5_2:6248805-6248824 Msa0752520:CDS 35.0%
! AAGGAATCAAACTTTTGCTC+AGG + chr5_2:6248871-6248890 Msa0752520:intron 35.0%
! AGGAATCAAACTTTTGCTCA+GGG + chr5_2:6248872-6248891 Msa0752520:intron 35.0%
TGTCTGATAAACATGCTGTT+AGG + chr5_2:6248909-6248928 Msa0752520:intron 35.0%
GGATAATTCAGTTGAGCTTC+TGG - chr5_2:6248644-6248663 None:intergenic 40.0%
CCCAACAGAATAGAGAAAGA+AGG - chr5_2:6248665-6248684 None:intergenic 40.0%
ACCAGAACCTTGACTAATGT+TGG + chr5_2:6248704-6248723 Msa0752520:CDS 40.0%
CCAGAACCTTGACTAATGTT+GGG + chr5_2:6248705-6248724 Msa0752520:CDS 40.0%
TGCAAACCCAACATTAGTCA+AGG - chr5_2:6248714-6248733 None:intergenic 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG + chr5_2:6248754-6248773 Msa0752520:CDS 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG + chr5_2:6248755-6248774 Msa0752520:CDS 40.0%
CAAGTGATATATGAAGGGAG+AGG + chr5_2:6248952-6248971 Msa0752520:intron 40.0%
ATAGGAAATATGGAAGGCAG+AGG - chr5_2:6249225-6249244 None:intergenic 40.0%
GTTCTCTTTACTGTGGAGTT+TGG - chr5_2:6249662-6249681 None:intergenic 40.0%
TGATGAGACCACCATAAACT+TGG + chr5_2:6249774-6249793 Msa0752520:intron 40.0%
GTTTCCTACTGCCAAGTTTA+TGG - chr5_2:6249788-6249807 None:intergenic 40.0%
TAGATGCTCAACTACCAACT+AGG + chr5_2:6249816-6249835 Msa0752520:intron 40.0%
!! CTAGGTAGTTAGGTCTTGTT+TGG - chr5_2:6250079-6250098 None:intergenic 40.0%
CTACCTAGTGCAATTTAACC+GGG + chr5_2:6250091-6250110 Msa0752520:intron 40.0%
TTACCCGGTTAAATTGCACT+AGG - chr5_2:6250097-6250116 None:intergenic 40.0%
!! GAGATGAGCAAGTTGATTTG+GGG + chr5_2:6250209-6250228 Msa0752520:intron 40.0%
!! GTTGATTTGGGGATTGAGAA+AGG + chr5_2:6250220-6250239 Msa0752520:intron 40.0%
TGAATGTGCAAGTCACACTA+AGG - chr5_2:6250474-6250493 None:intergenic 40.0%
! CACATCAAGCGTATTGACAA+TGG + chr5_2:6250492-6250511 Msa0752520:intron 40.0%
!! AGGTTGTTTTCCTTCACCAA+AGG - chr5_2:6250699-6250718 None:intergenic 40.0%
GTAACAGCTATGCTGTACAT+TGG - chr5_2:6251073-6251092 None:intergenic 40.0%
GTCTTCAATGAAGGGCAAAT+AGG - chr5_2:6251226-6251245 None:intergenic 40.0%
! AACAAGGTAGTGCATTTTGC+TGG - chr5_2:6251266-6251285 None:intergenic 40.0%
GCTCCATCTTCATCATGATT+TGG - chr5_2:6251410-6251429 None:intergenic 40.0%
TGTGAGGAAAAGTTTGTGGA+AGG - chr5_2:6251605-6251624 None:intergenic 40.0%
TGTAATTCAAGGGTCCTTTC+AGG - chr5_2:6251738-6251757 None:intergenic 40.0%
AACTCACACTCCAACATTCT+TGG + chr5_2:6251761-6251780 Msa0752520:CDS 40.0%
ACTCACACTCCAACATTCTT+GGG + chr5_2:6251762-6251781 Msa0752520:CDS 40.0%
TGTTTCAGACCCAAGAATGT+TGG - chr5_2:6251774-6251793 None:intergenic 40.0%
! ACATTCTTGGGTCTGAAACA+AGG + chr5_2:6251774-6251793 Msa0752520:CDS 40.0%
TGAAACAAGGACAAGGATTG+TGG + chr5_2:6251787-6251806 Msa0752520:CDS 40.0%
AGCGATGATAACCTTGGAAA+AGG + chr5_2:6251810-6251829 Msa0752520:CDS 40.0%
CATCCATCTTTCAATGACGA+AGG + chr5_2:6251873-6251892 Msa0752520:CDS 40.0%
AAAGGCCATTGTGAATTCAC+TGG + chr5_2:6251921-6251940 Msa0752520:CDS 40.0%
ACTCATAGGTGCAAGAAACT+TGG + chr5_2:6251965-6251984 Msa0752520:CDS 40.0%
TGGAAGAAGTTCTCAAATGG+AGG - chr5_2:6252011-6252030 None:intergenic 40.0%
CCATGGAAGAAGTTCTCAAA+TGG - chr5_2:6252014-6252033 None:intergenic 40.0%
CCATTTGAGAACTTCTTCCA+TGG + chr5_2:6252011-6252030 Msa0752520:CDS 40.0%
GATGTTCTATCCCTTTCACT+TGG + chr5_2:6252224-6252243 Msa0752520:CDS 40.0%
CTATCCCTTTCACTTGGTTT+AGG + chr5_2:6252230-6252249 Msa0752520:CDS 40.0%
GAGAACCTAAACCAAGTGAA+AGG - chr5_2:6252238-6252257 None:intergenic 40.0%
GCAATTGGGTCTTCAAAGAA+TGG - chr5_2:6252263-6252282 None:intergenic 40.0%
!! GCAAAAGCACCAATTGCAAT+TGG - chr5_2:6252278-6252297 None:intergenic 40.0%
! GCTTTTGCTGCTACTCAAAA+TGG + chr5_2:6252290-6252309 Msa0752520:CDS 40.0%
ATTGTAGCATCAGCAAAGCT+AGG + chr5_2:6252419-6252438 Msa0752520:CDS 40.0%
GTTGAGAAAAGTCTTTGGGT+TGG - chr5_2:6252478-6252497 None:intergenic 40.0%
! TTATTGCCACTTGTGTATCC+AGG + chr5_2:6252500-6252519 Msa0752520:CDS 40.0%
AATGAACCTGGATACACAAG+TGG - chr5_2:6252509-6252528 None:intergenic 40.0%
CTTGTGTATCCAGGTTCATT+TGG + chr5_2:6252509-6252528 Msa0752520:CDS 40.0%
AATCAGTCCTTGTGTTTACC+AGG + chr5_2:6252551-6252570 Msa0752520:CDS 40.0%
TAAGGATCCTGGTAAACACA+AGG - chr5_2:6252561-6252580 None:intergenic 40.0%
! TCAATGCTCTTTAAGGATCC+TGG - chr5_2:6252572-6252591 None:intergenic 40.0%
AAAGTAGTGCTGTGTGATGT+AGG + chr5_2:6252602-6252621 Msa0752520:CDS 40.0%
TCAATGCAGCAATACCACTT+AGG - chr5_2:6253030-6253049 None:intergenic 40.0%
!!! ATTGCTGATTTTATAGCGGC+TGG - chr5_2:6253079-6253098 None:intergenic 40.0%
ACTGCTAATACTCTCAACCT+CGG + chr5_2:6253106-6253125 Msa0752520:CDS 40.0%
! ATTGGATCAAAGGCTTTTGC+CGG + chr5_2:6253141-6253160 Msa0752520:CDS 40.0%
CCTGTTAAAGCAAATGATCC+GGG + chr5_2:6253199-6253218 Msa0752520:CDS 40.0%
GGATAATTCAGTTGAGCTTC+TGG - chr5_2:6248644-6248663 None:intergenic 40.0%
CCCAACAGAATAGAGAAAGA+AGG - chr5_2:6248665-6248684 None:intergenic 40.0%
ACCAGAACCTTGACTAATGT+TGG + chr5_2:6248704-6248723 Msa0752520:CDS 40.0%
CCAGAACCTTGACTAATGTT+GGG + chr5_2:6248705-6248724 Msa0752520:CDS 40.0%
TGCAAACCCAACATTAGTCA+AGG - chr5_2:6248714-6248733 None:intergenic 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG + chr5_2:6248754-6248773 Msa0752520:CDS 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG + chr5_2:6248755-6248774 Msa0752520:CDS 40.0%
CCCAACATTAGTCAAGGTTC+TGG - chr5_2:6248708-6248727 None:intergenic 45.0%
ACACTCATACCCAAAGCCAA+AGG - chr5_2:6248767-6248786 None:intergenic 45.0%
!! TATCACTTTTGCCCCTCCTT+TGG - chr5_2:6249336-6249355 None:intergenic 45.0%
ACCACCATAAACTTGGCAGT+AGG + chr5_2:6249781-6249800 Msa0752520:intron 45.0%
TCCTACTGCCAAGTTTATGG+TGG - chr5_2:6249785-6249804 None:intergenic 45.0%
GGTAGTTGAGCATCTAGCAT+TGG - chr5_2:6249812-6249831 None:intergenic 45.0%
! ACCAACTAGGCTTGTTTCGA+TGG + chr5_2:6249829-6249848 Msa0752520:intron 45.0%
TCCATCGAAACAAGCCTAGT+TGG - chr5_2:6249833-6249852 None:intergenic 45.0%
TAGCACTGTTAGCTGTTACC+CGG - chr5_2:6250112-6250131 None:intergenic 45.0%
GATTTGGGGATTGAGAAAGG+AGG + chr5_2:6250223-6250242 Msa0752520:intron 45.0%
ACAGCTTCCTCTGTCTCAAT+TGG + chr5_2:6250256-6250275 Msa0752520:intron 45.0%
GTCTGATCCAATTGAGACAG+AGG - chr5_2:6250266-6250285 None:intergenic 45.0%
!! TTCTACTGTGACGGATTCTG+AGG - chr5_2:6250288-6250307 None:intergenic 45.0%
TTATCCCCTTCAGGATACGA+TGG + chr5_2:6250445-6250464 Msa0752520:intron 45.0%
GATTCCATCGTATCCTGAAG+GGG - chr5_2:6250452-6250471 None:intergenic 45.0%
GGATTCCATCGTATCCTGAA+GGG - chr5_2:6250453-6250472 None:intergenic 45.0%
AGGATTCCATCGTATCCTGA+AGG - chr5_2:6250454-6250473 None:intergenic 45.0%
!!! GTAGTGCATTTTGCTGGCTT+GGG - chr5_2:6251260-6251279 None:intergenic 45.0%
! CATATCAATGTTGGCTGCAG+AGG + chr5_2:6251467-6251486 Msa0752520:CDS 45.0%
! CAAATCCAGAGGCTACTTTG+CGG - chr5_2:6251650-6251669 None:intergenic 45.0%
TAGCTTCACAGCAAATCCAG+AGG - chr5_2:6251661-6251680 None:intergenic 45.0%
! TGAAGAGATCTGGCTTCTTC+TGG - chr5_2:6251687-6251706 None:intergenic 45.0%
ACCTTTCGCTTGAAGAGATC+TGG - chr5_2:6251697-6251716 None:intergenic 45.0%
TTGTGTCAGCAAGACCTGAA+AGG + chr5_2:6251721-6251740 Msa0752520:CDS 45.0%
! TTGGGTCTGAAACAAGGACA+AGG + chr5_2:6251780-6251799 Msa0752520:CDS 45.0%
TTGTGGAGCGATGATAACCT+TGG + chr5_2:6251804-6251823 Msa0752520:CDS 45.0%
! CAATGGCCTTTCCATTTTGC+AGG - chr5_2:6251912-6251931 None:intergenic 45.0%
GCCATTGTGAATTCACTGGA+GGG + chr5_2:6251925-6251944 Msa0752520:CDS 45.0%
TATGAATCTTCCTGCAGCCT+CGG - chr5_2:6252051-6252070 None:intergenic 45.0%
! AATGCTAAAGGTGTAGCAGC+AGG + chr5_2:6252092-6252111 Msa0752520:CDS 45.0%
! TAAAGGTGTAGCAGCAGGAA+TGG + chr5_2:6252097-6252116 Msa0752520:CDS 45.0%
AAGGATCCAAGGAGCTTCAT+TGG - chr5_2:6252369-6252388 None:intergenic 45.0%
! ATCAATTGTGCTGGCACCAA+CGG - chr5_2:6252393-6252412 None:intergenic 45.0%
GCATCAGCAAAGCTAGGAAA+TGG + chr5_2:6252425-6252444 Msa0752520:CDS 45.0%
! ACAAGGACTGATTCTGTGCT+TGG - chr5_2:6252544-6252563 None:intergenic 45.0%
CAAGTGCTTCTGAGTTTGCA+AGG - chr5_2:6252688-6252707 None:intergenic 45.0%
!! CTTGCAAACTCAGAAGCACT+TGG + chr5_2:6252686-6252705 Msa0752520:CDS 45.0%
GCATAACTCACTTCAACTGC+AGG - chr5_2:6252743-6252762 None:intergenic 45.0%
GTTGAAGTGAGTTATGCAGC+TGG + chr5_2:6252746-6252765 Msa0752520:CDS 45.0%
ATTCCTGGACTTTCTTGGCT+TGG - chr5_2:6252890-6252909 None:intergenic 45.0%
AAACCAGACATCATTGGTCC+TGG + chr5_2:6252914-6252933 Msa0752520:CDS 45.0%
! TGTCAACATTCTAGCTGCGT+GGG + chr5_2:6252937-6252956 Msa0752520:CDS 45.0%
ATGTCTTGTCCTCACCTAAG+TGG + chr5_2:6253013-6253032 Msa0752520:CDS 45.0%
CCAGTAGCGAAAATATCAGC+CGG - chr5_2:6253163-6253182 None:intergenic 45.0%
! GATATTTTCGCTACTGGTGC+AGG + chr5_2:6253166-6253185 Msa0752520:CDS 45.0%
CCCGGATCATTTGCTTTAAC+AGG - chr5_2:6253202-6253221 None:intergenic 45.0%
CCCAACATTAGTCAAGGTTC+TGG - chr5_2:6248708-6248727 None:intergenic 45.0%
ACACTCATACCCAAAGCCAA+AGG - chr5_2:6248767-6248786 None:intergenic 45.0%
!!! AGAAATTTTTAAAATATATT+TGG - chr5_2:6250814-6250833 None:intergenic 5.0%
!!! TGCATTTTGCTGGCTTGGGA+CGG - chr5_2:6251256-6251275 None:intergenic 50.0%
!! GGTAGTGCATTTTGCTGGCT+TGG - chr5_2:6251261-6251280 None:intergenic 50.0%
TCTTACCGCAAAGTAGCCTC+TGG + chr5_2:6251642-6251661 Msa0752520:CDS 50.0%
GCCAGATCTCTTCAAGCGAA+AGG + chr5_2:6251693-6251712 Msa0752520:CDS 50.0%
! TGGCCTTTCCATTTTGCAGG+CGG - chr5_2:6251909-6251928 None:intergenic 50.0%
GGCCATTGTGAATTCACTGG+AGG + chr5_2:6251924-6251943 Msa0752520:CDS 50.0%
GCCCTCCAGTGAATTCACAA+TGG - chr5_2:6251929-6251948 None:intergenic 50.0%
AGTTGCTCTGCTGCAAACTC+TGG + chr5_2:6252323-6252342 Msa0752520:CDS 50.0%
!! TTGGAGAGAGTGCTGTATCC+AGG - chr5_2:6252350-6252369 None:intergenic 50.0%
CTCTCTCCAATGAAGCTCCT+TGG + chr5_2:6252360-6252379 Msa0752520:CDS 50.0%
ACACCAGGACCAATGATGTC+TGG - chr5_2:6252920-6252939 None:intergenic 50.0%
GCAGCTAGAATGTTGACACC+AGG - chr5_2:6252935-6252954 None:intergenic 50.0%
! GTGTCAACATTCTAGCTGCG+TGG + chr5_2:6252936-6252955 Msa0752520:CDS 50.0%
GCAGCAATACCACTTAGGTG+AGG - chr5_2:6253025-6253044 None:intergenic 50.0%
GCTAATACTCTCAACCTCGG+CGG + chr5_2:6253109-6253128 Msa0752520:CDS 50.0%
CTAATACTCTCAACCTCGGC+GGG + chr5_2:6253110-6253129 Msa0752520:CDS 50.0%
! CCGGCTGATATTTTCGCTAC+TGG + chr5_2:6253160-6253179 Msa0752520:CDS 50.0%
TTGCTCAGGGCTCTCTCACT+TGG + chr5_2:6248885-6248904 Msa0752520:intron 55.0%
TGCTCAGGGCTCTCTCACTT+GGG + chr5_2:6248886-6248905 Msa0752520:intron 55.0%
! CCTTTCCATTTTGCAGGCGG+CGG - chr5_2:6251906-6251925 None:intergenic 55.0%
TCTGCTGCAAACTCTGGTCC+TGG + chr5_2:6252329-6252348 Msa0752520:CDS 55.0%
GCTCCTTGGATCCTTACCGT+TGG + chr5_2:6252374-6252393 Msa0752520:CDS 55.0%
GCACCAACGGTAAGGATCCA+AGG - chr5_2:6252380-6252399 None:intergenic 55.0%
! TTGTGCTGGCACCAACGGTA+AGG - chr5_2:6252388-6252407 None:intergenic 55.0%
GGACCAAGCCAAGAAAGTCC+AGG + chr5_2:6252884-6252903 Msa0752520:CDS 55.0%
CCAATATAGGAATCCCGCCG+AGG - chr5_2:6253126-6253145 None:intergenic 55.0%
CCTCGGCGGGATTCCTATAT+TGG + chr5_2:6253123-6253142 Msa0752520:CDS 55.0%
TTGCTCAGGGCTCTCTCACT+TGG + chr5_2:6248885-6248904 Msa0752520:intron 55.0%
TGCTCAGGGCTCTCTCACTT+GGG + chr5_2:6248886-6248905 Msa0752520:intron 55.0%
! TTCCATTTTGCAGGCGGCGG+CGG - chr5_2:6251903-6251922 None:intergenic 60.0%
CCGCCGCCTGCAAAATGGAA+AGG + chr5_2:6251903-6251922 Msa0752520:CDS 60.0%
CGGCAGCGGTGTGTGTTCCA+TGG - chr5_2:6252031-6252050 None:intergenic 65.0%
TGGAACACACACCGCTGCCG+AGG + chr5_2:6252031-6252050 Msa0752520:CDS 65.0%
TCTTCCTGCAGCCTCGGCAG+CGG - chr5_2:6252045-6252064 None:intergenic 65.0%
TGCCGCCGCCGCCTGCAAAA+TGG + chr5_2:6251898-6251917 Msa0752520:CDS 70.0%
CACACCGCTGCCGAGGCTGC+AGG + chr5_2:6252038-6252057 Msa0752520:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 6248569 6253660 6248569 ID=Msa0752520;Name=Msa0752520
chr5_2 mRNA 6248569 6253660 6248569 ID=Msa0752520-mRNA-1;Parent=Msa0752520;Name=Msa0752520-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|0|0|2|0|849
chr5_2 exon 6248569 6248826 6248569 ID=Msa0752520-mRNA-1:exon:2650;Parent=Msa0752520-mRNA-1
chr5_2 exon 6251369 6253660 6251369 ID=Msa0752520-mRNA-1:exon:2651;Parent=Msa0752520-mRNA-1
chr5_2 CDS 6248569 6248826 6248569 ID=Msa0752520-mRNA-1:cds;Parent=Msa0752520-mRNA-1
chr5_2 CDS 6251369 6253660 6251369 ID=Msa0752520-mRNA-1:cds;Parent=Msa0752520-mRNA-1
Gene Sequence

>Msa0752520

TTGGGTTATACTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTAATGTGAAAAGTATACCAGAAGCTCAACTGAATTATCCTTCTTTCTCTATTCTGTTGGGGTCAGATTCACAGTATTATACCAGAACCTTGACTAATGTTGGGTTTGCAAATTCAACATATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTAAATGAGAAGGCAAATCACAAGCAACTTTCTCTTTTTTTCATCAAATTCCAAATCATGATGAAGATGGAGCTTACATTGCTTGTTAGCCTCATTTTCATGTTATGCAGCATATCAATGTTGGCTGCAGAGGAGAATCTAGAACATGATCAAATGAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCTCTTCAATCAGAAGATTTGCATAGTTGGTACCATTCATTCCTTCCACAAACTTTTCCTCACAAAGAAAGAATGGTTTTCTCTTACCGCAAAGTAGCCTCTGGATTTGCTGTGAAGCTAACACCAGAAGAAGCCAGATCTCTTCAAGCGAAAGGTGAAATTGTGTCAGCAAGACCTGAAAGGACCCTTGAATTACATACAACTCACACTCCAACATTCTTGGGTCTGAAACAAGGACAAGGATTGTGGAGCGATGATAACCTTGGAAAAGGTGTCATAATTGGTATCATAGACACGGGAATATTCCCTTTACATCCATCTTTCAATGACGAAGGAATGCCGCCGCCGCCTGCAAAATGGAAAGGCCATTGTGAATTCACTGGAGGGCAAGTATGCAACAATAAACTCATAGGTGCAAGAAACTTGGTCAAAAGTGCAATTCAAGAGCCTCCATTTGAGAACTTCTTCCATGGAACACACACCGCTGCCGAGGCTGCAGGAAGATTCATAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCAGGAATGGCACCTAATGCTCACTTAGCAATATACAAAGTGTGTAATGACAAAATTGGATGCACTGAAAGTGCTATATTAGCTGCAATGGATATTGCTATTGAAGATGGTGTAGATGTTCTATCCCTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACTCTGGTCCTGGATACAGCACTCTCTCCAATGAAGCTCCTTGGATCCTTACCGTTGGTGCCAGCACAATTGATAGAAAAATTGTAGCATCAGCAAAGCTAGGAAATGGTGAAGAATATGAAGGTGAAACGTTGTTCCAACCCAAAGACTTTTCTCAACAATTATTGCCACTTGTGTATCCAGGTTCATTTGGATATGGAAACCAAGCACAGAATCAGTCCTTGTGTTTACCAGGATCCTTAAAGAGCATTGATTTAAGTGGAAAAGTAGTGCTGTGTGATGTAGGAAATGTCTCAAGTATTGTGAAAGGACAAGAAGTTATAAATTCAGGTGGTGTAGCAATGATCCTTGCAAACTCAGAAGCACTTGGTTTCAGTACTTTTGCTATTGCTCATGTTTTACCTGCAGTTGAAGTGAGTTATGCAGCTGGTTTAACAATTAAATCTTACCTAAACTCAACATACAATCCAACAGCAACATTGATATTTAAAGGAACGGTAATTGGTGATTCTTTAGCTCCTTCTGTTGTTTATTTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCAGGAATTCTTAAACCAGACATCATTGGTCCTGGTGTCAACATTCTAGCTGCGTGGGCTGTTTCAGTAGACAACAAAGTTCCAGCTTTTGACATTATTTCTGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCGCCAGCCGCTATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGCGGGATTCCTATATTGGATCAAAGGCTTTTGCCGGCTGATATTTTCGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCGGGTCTTGTTTATGATATTCAACCAGAAGATTATGTTCCTTATCTATGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTAATGTGAAAAGTATACCAGAAGCTCAACTGAATTATCCTTCTTTCTCTATTCTGTTGGGGTCAGATTCACAGTATTATACCAGAACCTTGACTAATGTTGGGTTTGCAAATTCAACATATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTAAATGAGAAGGTTAGTTTCTCTGTTGAATTTATACCACAAATAAAGGAAAACAGAAGGAATCAAACTTTTGCTCAGGGCTCTCTCACTTGGGTGTCTGATAAACATGCTGTTAGGATCCCAATATCTGTCATTTTTAAGTGA
Protein sequence

>Msa0752520

LGYTDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYRVELEVPLALGMSVNPSEITFTEVNEKANHKQLSLFFIKFQIMMKMELTLLVSLIFMLCSISMLAAEENLEHDQMNLMTYIVHVKKSENVASLQSEDLHSWYHSFLPQTFPHKERMVFSYRKVASGFAVKLTPEEARSLQAKGEIVSARPERTLELHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGIIDTGIFPLHPSFNDEGMPPPPAKWKGHCEFTGGQVCNNKLIGARNLVKSAIQEPPFENFFHGTHTAAEAAGRFIEDASVFGNAKGVAAGMAPNAHLAIYKVCNDKIGCTESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQNGVFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIVASAKLGNGEEYEGETLFQPKDFSQQLLPLVYPGSFGYGNQAQNQSLCLPGSLKSIDLSGKVVLCDVGNVSSIVKGQEVINSGGVAMILANSEALGFSTFAIAHVLPAVEVSYAAGLTIKSYLNSTYNPTATLIFKGTVIGDSLAPSVVYFSSRGPSQESPGILKPDIIGPGVNILAAWAVSVDNKVPAFDIISGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLLPADIFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYSDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYRVELEVPLALGMSVNPSEITFTEVNEKVSFSVEFIPQIKENRRNQTFAQGSLTWVSDKHAVRIPISVIFK*