Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807520 | AES99159.1 | 66.549 | 284 | 62 | 8 | 6 | 263 | 28 | 304 | 1.47e-103 | 317 |
| Msa0807520 | AES99159.1 | 67.021 | 282 | 67 | 6 | 93 | 354 | 29 | 304 | 6.78e-104 | 318 |
| Msa0807520 | AES99159.1 | 72.251 | 191 | 49 | 4 | 162 | 352 | 26 | 212 | 2.48e-76 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807520 | G7KFX2 | 66.549 | 284 | 62 | 8 | 6 | 263 | 28 | 304 | 7.02e-104 | 317 |
| Msa0807520 | G7KFX2 | 67.021 | 282 | 67 | 6 | 93 | 354 | 29 | 304 | 3.24e-104 | 318 |
| Msa0807520 | G7KFX2 | 72.251 | 191 | 49 | 4 | 162 | 352 | 26 | 212 | 1.19e-76 | 248 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0736630 | Msa0807520 | 0.896642 | 3.033756e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 87 sgRNAs with CRISPR-Local
Find 551 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTAGTAAACTTAGAAAA+TGG | 0.282103 | 5_3:-29006547 | None:intergenic |
| GATGGTGGATGTTGTCTAAA+TGG | 0.328592 | 5_3:-29006213 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.331713 | 5_3:-28996350 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.331713 | 5_3:-29006075 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.331713 | 5_3:-29006351 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.335846 | 5_3:-28996488 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.335846 | 5_3:-28996626 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.335846 | 5_3:-29006489 | None:intergenic |
| GAGGTGCAGGTTCTGATTGT+TGG | 0.405446 | 5_3:+28996591 | Msa0807520:CDS |
| GAGGTGCAGGTTCTGATTGT+TGG | 0.405446 | 5_3:+29006316 | Msa0807520:CDS |
| GTGATGCAAGTTCTGATTGT+TGG | 0.405834 | 5_3:+28996315 | Msa0807520:CDS |
| GTGATGCAAGTTCTGATTGT+TGG | 0.405834 | 5_3:+29006040 | Msa0807520:CDS |
| GAGGTTGCTACAAAGCAATT+AGG | 0.420538 | 5_3:+29006519 | Msa0807520:CDS |
| GTGGTGCAAGTTCTGATTGT+TGG | 0.443619 | 5_3:+28996453 | Msa0807520:CDS |
| GTGGTGCAAGTTCTGATTGT+TGG | 0.443619 | 5_3:+29006178 | Msa0807520:CDS |
| GTGGTGCAAGTTCTGATTGT+TGG | 0.443619 | 5_3:+29006454 | Msa0807520:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_3:+28996383 | Msa0807520:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_3:+28996521 | Msa0807520:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_3:+29006108 | Msa0807520:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_3:+29006246 | Msa0807520:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_3:+29006384 | Msa0807520:CDS |
| AGGTGCAGGTTCTGATTGTT+GGG | 0.464523 | 5_3:+28996592 | Msa0807520:CDS |
| AGGTGCAGGTTCTGATTGTT+GGG | 0.464523 | 5_3:+29006317 | Msa0807520:CDS |
| TGATGCAAGTTCTGATTGTT+GGG | 0.475911 | 5_3:+28996316 | Msa0807520:CDS |
| TGATGCAAGTTCTGATTGTT+GGG | 0.475911 | 5_3:+29006041 | Msa0807520:CDS |
| TGGTGCAAGTTCTGATTGTT+GGG | 0.485043 | 5_3:+28996454 | Msa0807520:CDS |
| TGGTGCAAGTTCTGATTGTT+GGG | 0.485043 | 5_3:+29006179 | Msa0807520:CDS |
| TGGTGCAAGTTCTGATTGTT+GGG | 0.485043 | 5_3:+29006455 | Msa0807520:CDS |
| GCTAAAGACAGTCGAGGTGC+AGG | 0.518191 | 5_3:+28996578 | Msa0807520:CDS |
| GCTAAAGACAGTCGAGGTGC+AGG | 0.518191 | 5_3:+29006303 | Msa0807520:CDS |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_3:-28996480 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_3:-28996618 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_3:-29006343 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_3:-29006481 | None:intergenic |
| ATGTTGTCTAAATGGATCAC+GGG | 0.529317 | 5_3:-29006205 | None:intergenic |
| GCAGCTACTGATGGTGGATG+TGG | 0.531914 | 5_3:-28996359 | None:intergenic |
| GCAGCTACTGATGGTGGATG+TGG | 0.531914 | 5_3:-29006084 | None:intergenic |
| GCAGCTACTGATGGTGGATG+TGG | 0.531914 | 5_3:-29006360 | None:intergenic |
| GCAGCTACAGATGGTGGATG+TGG | 0.548299 | 5_3:-28996497 | None:intergenic |
| TCAACTACAGATGGTGGATG+TGG | 0.570815 | 5_3:-28996635 | None:intergenic |
| TCAACTACAGATGGTGGATG+TGG | 0.570815 | 5_3:-29006498 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.578863 | 5_3:-28996342 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.578863 | 5_3:-29006067 | None:intergenic |
| GATGTTGTCTAAATGGATCA+CGG | 0.594894 | 5_3:-29006206 | None:intergenic |
| TGAGACAAAGCAAAATGATG+TGG | 0.601928 | 5_3:+29004265 | Msa0807520:CDS |
| GTAACCTCGGCAGCTACTGA+TGG | 0.603149 | 5_3:-28996368 | None:intergenic |
| GTAACCTCGGCAGCTACTGA+TGG | 0.603149 | 5_3:-29006093 | None:intergenic |
| GTAACCTCGGCAGCTACTGA+TGG | 0.603149 | 5_3:-29006369 | None:intergenic |
| ACATCCACCATCTGTAGTTG+AGG | 0.603772 | 5_3:+28996637 | Msa0807520:CDS |
| ACATCCACCATCTGTAGTTG+AGG | 0.603772 | 5_3:+29006500 | Msa0807520:CDS |
| ACCTCGGCAGCTACTGATGG+TGG | 0.604253 | 5_3:-28996365 | None:intergenic |
| ACCTCGGCAGCTACTGATGG+TGG | 0.604253 | 5_3:-29006090 | None:intergenic |
| ACCTCGGCAGCTACTGATGG+TGG | 0.604253 | 5_3:-29006366 | None:intergenic |
| ACCTCGGCAGCTACAGATGG+TGG | 0.606425 | 5_3:-28996503 | None:intergenic |
| ACCTCGGCAGCTACAGATGG+TGG | 0.606425 | 5_3:-29006228 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.607416 | 5_3:-28996343 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.607416 | 5_3:-29006068 | None:intergenic |
| GTAGCAACCTCAACTACAGA+TGG | 0.607993 | 5_3:-28996644 | None:intergenic |
| GTAGCAACCTCAACTACAGA+TGG | 0.607993 | 5_3:-29006507 | None:intergenic |
| GCAACCTCAACTACAGATGG+TGG | 0.611050 | 5_3:-28996641 | None:intergenic |
| GCAACCTCAACTACAGATGG+TGG | 0.611050 | 5_3:-29006504 | None:intergenic |
| TCCACCATCTGTAGCTGCCG+AGG | 0.621472 | 5_3:+28996502 | Msa0807520:CDS |
| TCCACCATCTGTAGCTGCCG+AGG | 0.621472 | 5_3:+29006227 | Msa0807520:CDS |
| GTAACCTCGGCAGCTACAGA+TGG | 0.623701 | 5_3:-28996506 | None:intergenic |
| GTAACCTCGGCAGCTACAGA+TGG | 0.623701 | 5_3:-29006231 | None:intergenic |
| TGAGACACAACAAAATGATG+TGG | 0.628198 | 5_3:+28996250 | Msa0807520:CDS |
| TGAGACACAACAAAATGATG+TGG | 0.628198 | 5_3:+29005975 | Msa0807520:CDS |
| TCCACCATCAGTAGCTGCCG+AGG | 0.634586 | 5_3:+28996364 | Msa0807520:CDS |
| TCCACCATCAGTAGCTGCCG+AGG | 0.634586 | 5_3:+29006089 | Msa0807520:CDS |
| TCCACCATCAGTAGCTGCCG+AGG | 0.634586 | 5_3:+29006365 | Msa0807520:CDS |
| GTTGCTACAAAGCAATTAGG+AGG | 0.635126 | 5_3:+29006522 | Msa0807520:CDS |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_3:-28996481 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_3:-28996619 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_3:-29006344 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_3:-29006482 | None:intergenic |
| ACAAGTGCTAAAGACAGTCG+TGG | 0.686347 | 5_3:+28996434 | Msa0807520:CDS |
| ACAAGTGCTAAAGACAGTCG+TGG | 0.686347 | 5_3:+29006159 | Msa0807520:CDS |
| ACAAGTGCTAAAGACAGTCG+TGG | 0.686347 | 5_3:+29006435 | Msa0807520:CDS |
| ACAAGTGCTAAAGACAGTCG+AGG | 0.693274 | 5_3:+28996572 | Msa0807520:CDS |
| ACAAGTGCTAAAGACAGTCG+AGG | 0.693274 | 5_3:+29006297 | Msa0807520:CDS |
| AAAACGAATGGTAAAGACGG+TGG | 0.718541 | 5_3:+28996293 | Msa0807520:CDS |
| AAAACGAATGGTAAAGACGG+TGG | 0.718541 | 5_3:+29006018 | Msa0807520:CDS |
| TGTTGTCTAAATGGATCACG+GGG | 0.742387 | 5_3:-29006204 | None:intergenic |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_3:-28996479 | None:intergenic |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_3:-28996617 | None:intergenic |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_3:-29006342 | None:intergenic |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_3:-29006480 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTATTTTATATTTAA+TGG | - | chr5_3:28996813-28996832 | None:intergenic | 0.0% |
| !! | TAATATTTATTTAATAAAAA+AGG | - | chr5_3:29005104-29005123 | None:intergenic | 0.0% |
| !! | AATAAAAATAAAAAGTTTCA+TGG | + | chr5_3:28996823-28996842 | Msa0807520:intron | 10.0% |
| !! | AAAAAATTCATTATAATGTT+TGG | - | chr5_3:28998647-28998666 | None:intergenic | 10.0% |
| !!! | ATAATGAATTTTTTTAGTTT+TGG | + | chr5_3:28998653-28998672 | Msa0807520:intron | 10.0% |
| !!! | TAATGAATTTTTTTAGTTTT+GGG | + | chr5_3:28998654-28998673 | Msa0807520:intron | 10.0% |
| !!! | ATTTTGAAACAATTTTTTTT+TGG | + | chr5_3:28998980-28998999 | Msa0807520:intron | 10.0% |
| !!! | TATTTTAAATTCTTTTACTT+TGG | + | chr5_3:28999038-28999057 | Msa0807520:intron | 10.0% |
| !!! | TTATCTCAAATTTTATTTAT+TGG | + | chr5_3:28999877-28999896 | Msa0807520:intron | 10.0% |
| !! | AAAATAACAAGAAAAAAAAA+GGG | - | chr5_3:29000176-29000195 | None:intergenic | 10.0% |
| !!! | TTATCTTAAAATTTATCTTT+TGG | + | chr5_3:29000924-29000943 | Msa0807520:intron | 10.0% |
| !!! | ATTAGACTTAATTTTTTTTA+GGG | - | chr5_3:29001113-29001132 | None:intergenic | 10.0% |
| !!! | AATTAGACTTAATTTTTTTT+AGG | - | chr5_3:29001114-29001133 | None:intergenic | 10.0% |
| !! | TAAAAAATTTATAATCATAG+AGG | - | chr5_3:29004964-29004983 | None:intergenic | 10.0% |
| !!! | ATGAAGAAATATATTTTTTT+AGG | + | chr5_3:29005131-29005150 | Msa0807520:intron | 10.0% |
| !!! | TCTAATTGATTATTTTTAAT+TGG | + | chr5_3:29005740-29005759 | Msa0807520:intron | 10.0% |
| !!! | ATTTTATATTTAATGGACAA+TGG | - | chr5_3:28996806-28996825 | None:intergenic | 15.0% |
| !! | ATAATTTATATCTGCATTAT+TGG | + | chr5_3:28997118-28997137 | Msa0807520:intron | 15.0% |
| !!! | TTTATTCCATTATCAATTTT+AGG | + | chr5_3:28997987-28998006 | Msa0807520:intron | 15.0% |
| !! | TAATAGAGATAATATTTAGA+TGG | + | chr5_3:28998096-28998115 | Msa0807520:intron | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr5_3:28998939-28998958 | Msa0807520:intron | 15.0% |
| !!! | TAAACATTTTTGTTAGTTTT+TGG | + | chr5_3:28999832-28999851 | Msa0807520:intron | 15.0% |
| !! | CAAAATAACAAGAAAAAAAA+AGG | - | chr5_3:29000177-29000196 | None:intergenic | 15.0% |
| !! | TAAAGGAAATTGAAAAATAT+AGG | - | chr5_3:29000671-29000690 | None:intergenic | 15.0% |
| !! | AATGATAAGGAAAAAAAATA+AGG | - | chr5_3:29001228-29001247 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAAGATAAAGA+AGG | - | chr5_3:29001268-29001287 | None:intergenic | 15.0% |
| !!! | TTTATTTGAGTCTAATTTTT+AGG | + | chr5_3:29001674-29001693 | Msa0807520:intron | 15.0% |
| !! | ATAAAAATTACAAAGGAAAT+AGG | - | chr5_3:29001959-29001978 | None:intergenic | 15.0% |
| !!! | AAAAGACAACATTTTAAAAA+TGG | - | chr5_3:29002065-29002084 | None:intergenic | 15.0% |
| !!! | ATGAATGTTAATTTTGTATA+AGG | - | chr5_3:29002452-29002471 | None:intergenic | 15.0% |
| !! | TTCATCTTGATAAAAAATTT+GGG | - | chr5_3:29002717-29002736 | None:intergenic | 15.0% |
| !! | AAAAGAATAACAATGAAATT+AGG | + | chr5_3:29002802-29002821 | Msa0807520:intron | 15.0% |
| !!! | TATTTAAAGTTGCAATTTTT+GGG | - | chr5_3:29002884-29002903 | None:intergenic | 15.0% |
| !!! | TTATTTAAAGTTGCAATTTT+TGG | - | chr5_3:29002885-29002904 | None:intergenic | 15.0% |
| !!! | AAAAATATGTTCATTTTTTC+AGG | + | chr5_3:29003303-29003322 | Msa0807520:intron | 15.0% |
| !! | CCATCTATAATATTATTATT+TGG | - | chr5_3:29003745-29003764 | None:intergenic | 15.0% |
| !! | CCAAATAATAATATTATAGA+TGG | + | chr5_3:29003742-29003761 | Msa0807520:intron | 15.0% |
| !! | TCTAATTTACTTAAGAAAAA+TGG | + | chr5_3:29003855-29003874 | Msa0807520:intron | 15.0% |
| !! | TACATATATTGTATCATTTA+TGG | - | chr5_3:29004115-29004134 | None:intergenic | 15.0% |
| !!! | TTCCTAAATTACTAATTTTA+AGG | + | chr5_3:29004180-29004199 | Msa0807520:intron | 15.0% |
| !! | TTCCTTAAAATTAGTAATTT+AGG | - | chr5_3:29004185-29004204 | None:intergenic | 15.0% |
| !! | TTTAAATTAAAACCTAAAGT+CGG | + | chr5_3:29004517-29004536 | Msa0807520:intron | 15.0% |
| !!! | GATAGAATGTTTATATTTTT+GGG | + | chr5_3:29004789-29004808 | Msa0807520:intron | 15.0% |
| !!! | AGGAAAATTAAAATTTTACA+TGG | - | chr5_3:29005020-29005039 | None:intergenic | 15.0% |
| !! | ATTGAATAAAATGCAATAAT+AGG | + | chr5_3:29005497-29005516 | Msa0807520:intron | 15.0% |
| !!! | ACTACTTGAATTATTTTTTA+TGG | - | chr5_3:29005698-29005717 | None:intergenic | 15.0% |
| !! | TTCCTAAATTACTAAATTTA+AGG | + | chr5_3:29005895-29005914 | Msa0807520:intron | 15.0% |
| !! | TTCCTTAAATTTAGTAATTT+AGG | - | chr5_3:29005900-29005919 | None:intergenic | 15.0% |
| !!! | TCACGTAAACTTTTTTTTAA+GGG | + | chr5_3:28997015-28997034 | Msa0807520:intron | 20.0% |
| !! | TGATGATTACACTAAAAATA+TGG | + | chr5_3:28997194-28997213 | Msa0807520:intron | 20.0% |
| !! | TGAGAAAGTAGATAAATAAT+AGG | + | chr5_3:28997507-28997526 | Msa0807520:intron | 20.0% |
| !! | AGAAAAATAGTTATGTATCA+AGG | + | chr5_3:28997589-28997608 | Msa0807520:intron | 20.0% |
| !!! | TTAATTCTAGAGTTTATTAC+AGG | - | chr5_3:28997636-28997655 | None:intergenic | 20.0% |
| !! | TCAATTAAAATTGATGTTCT+TGG | - | chr5_3:28997914-28997933 | None:intergenic | 20.0% |
| !! | AATGTTCCTAAAATTGATAA+TGG | - | chr5_3:28997996-28998015 | None:intergenic | 20.0% |
| !! | AAATGGAATGAAATAATCAT+TGG | + | chr5_3:28998812-28998831 | Msa0807520:intron | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | - | chr5_3:28998860-28998879 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr5_3:28998861-28998880 | None:intergenic | 20.0% |
| !! | ATTGTAGATGTATTATGATT+AGG | + | chr5_3:28999088-28999107 | Msa0807520:intron | 20.0% |
| !! | ATAAACTAGAAAAACAAAGA+AGG | - | chr5_3:29000222-29000241 | None:intergenic | 20.0% |
| !!! | TTTTCAATTTCCTTTACTAA+TGG | + | chr5_3:29000675-29000694 | Msa0807520:intron | 20.0% |
| !!! | TGAAGTTGATATAAATGATA+AGG | - | chr5_3:29001241-29001260 | None:intergenic | 20.0% |
| !! | AATGGTTGTATCATTATATT+AGG | - | chr5_3:29001488-29001507 | None:intergenic | 20.0% |
| !! | TAACAAATTACATGCTTATT+TGG | + | chr5_3:29001628-29001647 | Msa0807520:intron | 20.0% |
| !!! | GTTGAAGAAATTGAAAATTT+TGG | - | chr5_3:29001712-29001731 | None:intergenic | 20.0% |
| !!! | TTTATTTTATCATGTCTCTT+TGG | - | chr5_3:29001924-29001943 | None:intergenic | 20.0% |
| !! | TTCTAATTCTATAGAAATTC+AGG | - | chr5_3:29002010-29002029 | None:intergenic | 20.0% |
| !! | AAACTAGATATAGACTTATA+TGG | - | chr5_3:29002256-29002275 | None:intergenic | 20.0% |
| !!! | ATGTTAATTTTGTATAAGGT+AGG | - | chr5_3:29002448-29002467 | None:intergenic | 20.0% |
| !!! | ATTTCTTTTTGGTGAAAAAA+AGG | - | chr5_3:29002484-29002503 | None:intergenic | 20.0% |
| !! | AAAAACTTCTTAATGATCAT+TGG | - | chr5_3:29002572-29002591 | None:intergenic | 20.0% |
| !! | CTTCATCTTGATAAAAAATT+TGG | - | chr5_3:29002718-29002737 | None:intergenic | 20.0% |
| !!! | TTTTTGTACACAAATACTAA+TGG | + | chr5_3:29003003-29003022 | Msa0807520:intron | 20.0% |
| !!! | AAAAAAATGGTTTTAAAGCT+TGG | + | chr5_3:29003251-29003270 | Msa0807520:intron | 20.0% |
| !! | CTAAAAAATGGATGATTTAA+TGG | - | chr5_3:29003383-29003402 | None:intergenic | 20.0% |
| !! | ATTATTATTTGGTACCAATT+TGG | - | chr5_3:29003734-29003753 | None:intergenic | 20.0% |
| !!! | TTCTGATTTTTATATATGAG+TGG | + | chr5_3:29004340-29004359 | Msa0807520:intron | 20.0% |
| !!! | ATTTCAAGCTTTAACTTTTT+TGG | - | chr5_3:29004602-29004621 | None:intergenic | 20.0% |
| !! | AAAATATAAACATTCTATCC+TGG | - | chr5_3:29004788-29004807 | None:intergenic | 20.0% |
| !!! | GGATAGAATGTTTATATTTT+TGG | + | chr5_3:29004788-29004807 | Msa0807520:intron | 20.0% |
| !!! | ATGAAGTGGTAATTTTTTTT+GGG | + | chr5_3:29004818-29004837 | Msa0807520:intron | 20.0% |
| !! | CAATATAGATTATTTCGTAA+CGG | + | chr5_3:29004990-29005009 | Msa0807520:intron | 20.0% |
| !!! | TTTTTGTCTTGTCTTAAATT+TGG | - | chr5_3:29005196-29005215 | None:intergenic | 20.0% |
| !! | AATTAAAGATGCGAAAATTA+GGG | - | chr5_3:29005288-29005307 | None:intergenic | 20.0% |
| !! | AAATTAAAGATGCGAAAATT+AGG | - | chr5_3:29005289-29005308 | None:intergenic | 20.0% |
| !! | TCTAATTTACTTCAGAAAAA+TGG | + | chr5_3:29005327-29005346 | Msa0807520:intron | 20.0% |
| !! | AAAGTATGAAGATATGTTTA+TGG | - | chr5_3:29005626-29005645 | None:intergenic | 20.0% |
| !!! | TATCTTCATACTTTTTCTAA+TGG | + | chr5_3:29005632-29005651 | Msa0807520:intron | 20.0% |
| !! | TTTATGGTTAAAAAAAAGTG+TGG | - | chr5_3:29005682-29005701 | None:intergenic | 20.0% |
| !! | CATAATAAACTTCACAAATT+TGG | - | chr5_3:29005868-29005887 | None:intergenic | 20.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | - | chr5_3:28996384-28996403 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | - | chr5_3:28996384-28996403 | None:intergenic | 25.0% |
| ! | CCATTAGTAAACTTAGAAAA+TGG | - | chr5_3:28996687-28996706 | None:intergenic | 25.0% |
| !! | CCATTTTCTAAGTTTACTAA+TGG | + | chr5_3:28996684-28996703 | Msa0807520:intron | 25.0% |
| ! | ATAATAACAACATGTTTACG+AGG | - | chr5_3:28996855-28996874 | None:intergenic | 25.0% |
| !!! | GTCACGTAAACTTTTTTTTA+AGG | + | chr5_3:28997014-28997033 | Msa0807520:intron | 25.0% |
| ! | AATCATCATGTCAAGAAAAT+GGG | - | chr5_3:28997182-28997201 | None:intergenic | 25.0% |
| ! | TAATCATCATGTCAAGAAAA+TGG | - | chr5_3:28997183-28997202 | None:intergenic | 25.0% |
| ! | TTGTAGCATATAATAGACAT+TGG | - | chr5_3:28997421-28997440 | None:intergenic | 25.0% |
| !!! | ACTCATTTTAAAAGTGTAGA+TGG | + | chr5_3:28997449-28997468 | Msa0807520:intron | 25.0% |
| !!! | AAATTATGTTGAGTTGATGA+AGG | + | chr5_3:28997655-28997674 | Msa0807520:intron | 25.0% |
| ! | AACACATAAGAAAATACACT+TGG | + | chr5_3:28997697-28997716 | Msa0807520:intron | 25.0% |
| ! | TACACTTGGCAAAATATAAT+TGG | + | chr5_3:28997711-28997730 | Msa0807520:intron | 25.0% |
| ! | ATATAATTGGTTGAGGTAAA+TGG | + | chr5_3:28997724-28997743 | Msa0807520:intron | 25.0% |
| ! | TGAATTGATTGTGAAATGAA+AGG | - | chr5_3:28997957-28997976 | None:intergenic | 25.0% |
| !!! | TCAATTTTAGGAACATTACA+AGG | + | chr5_3:28997999-28998018 | Msa0807520:intron | 25.0% |
| ! | GAAGAAAATTCAATTGCTTT+AGG | + | chr5_3:28998021-28998040 | Msa0807520:intron | 25.0% |
| !! | AATATCATACTTAAGCCTTT+TGG | + | chr5_3:28998184-28998203 | Msa0807520:intron | 25.0% |
| ! | TATAATGTTTGGATTTCAGA+GGG | - | chr5_3:28998636-28998655 | None:intergenic | 25.0% |
| ! | TTATAATGTTTGGATTTCAG+AGG | - | chr5_3:28998637-28998656 | None:intergenic | 25.0% |
| !!! | AAATGACACTCATTTTGAAA+CGG | + | chr5_3:28999006-28999025 | Msa0807520:intron | 25.0% |
| !!! | AATTCTTTTACTTTGGTCTT+TGG | + | chr5_3:28999045-28999064 | Msa0807520:intron | 25.0% |
| ! | TGTTCATCTTAATGTTAGAA+CGG | - | chr5_3:28999225-28999244 | None:intergenic | 25.0% |
| ! | TTAAGATGAACAACTTTGTT+AGG | + | chr5_3:28999233-28999252 | Msa0807520:intron | 25.0% |
| ! | TAAGATGAACAACTTTGTTA+GGG | + | chr5_3:28999234-28999253 | Msa0807520:intron | 25.0% |
| ! | TCAAATCAACATACATCATA+TGG | - | chr5_3:28999401-28999420 | None:intergenic | 25.0% |
| !! | TGAAGGATTTGTAGATTTTT+GGG | - | chr5_3:28999502-28999521 | None:intergenic | 25.0% |
| !! | ATGAAGGATTTGTAGATTTT+TGG | - | chr5_3:28999503-28999522 | None:intergenic | 25.0% |
| ! | TATCATAATATTGAGATTCC+TGG | - | chr5_3:28999814-28999833 | None:intergenic | 25.0% |
| !! | AAAAACAAAGAAGGCATAAA+AGG | - | chr5_3:29000213-29000232 | None:intergenic | 25.0% |
| !! | TTCTCAAGGTATTAAGTATA+TGG | - | chr5_3:29000483-29000502 | None:intergenic | 25.0% |
| ! | TACTTAATACCTTGAGAATT+TGG | + | chr5_3:29000485-29000504 | Msa0807520:intron | 25.0% |
| ! | AAAAAAATCCATCACAATGT+TGG | - | chr5_3:29000570-29000589 | None:intergenic | 25.0% |
| ! | GGAAATTGAAAAATATAGGT+TGG | - | chr5_3:29000667-29000686 | None:intergenic | 25.0% |
| ! | CAATATAAAGATGTGTTAAG+TGG | + | chr5_3:29000721-29000740 | Msa0807520:intron | 25.0% |
| ! | ATCATAATGTTGATACTTCA+GGG | - | chr5_3:29000857-29000876 | None:intergenic | 25.0% |
| ! | ATTTCAAATTCCGACATATT+TGG | + | chr5_3:29000989-29001008 | Msa0807520:intron | 25.0% |
| ! | TATAATGATACAACCATTGT+AGG | + | chr5_3:29001490-29001509 | Msa0807520:intron | 25.0% |
| !!! | ATTTTCAAGAAAACCTACAA+TGG | - | chr5_3:29001506-29001525 | None:intergenic | 25.0% |
| ! | ATCAAACATGATATTTAAGC+AGG | - | chr5_3:29001898-29001917 | None:intergenic | 25.0% |
| ! | AATTACAAAGGAAATAGGAT+AGG | - | chr5_3:29001954-29001973 | None:intergenic | 25.0% |
| !! | TCCTTTGTAATTTTTATCCT+AGG | + | chr5_3:29001962-29001981 | Msa0807520:intron | 25.0% |
| ! | ACCTAGGATAAAAATTACAA+AGG | - | chr5_3:29001966-29001985 | None:intergenic | 25.0% |
| ! | GATATGATAGATACATGATA+AGG | - | chr5_3:29002283-29002302 | None:intergenic | 25.0% |
| ! | AAGGCATACTTTAGATTTAA+AGG | + | chr5_3:29002337-29002356 | Msa0807520:intron | 25.0% |
| ! | ACTTTAGATTTAAAGGTTAC+AGG | + | chr5_3:29002344-29002363 | Msa0807520:intron | 25.0% |
| !! | TTTTGGTGAAAAAAAGGTTA+TGG | - | chr5_3:29002478-29002497 | None:intergenic | 25.0% |
| !! | CACAACAATGAATTTCTTTT+TGG | - | chr5_3:29002495-29002514 | None:intergenic | 25.0% |
| !! | CGATTCTCTTGTAATAATTT+TGG | + | chr5_3:29002751-29002770 | Msa0807520:intron | 25.0% |
| !!! | TCTCTTGTAATAATTTTGGT+TGG | + | chr5_3:29002755-29002774 | Msa0807520:intron | 25.0% |
| !! | TTTTAACCACTAATGTTCAT+GGG | - | chr5_3:29002971-29002990 | None:intergenic | 25.0% |
| ! | TATGAACATTAGACAAATAC+AGG | + | chr5_3:29003046-29003065 | Msa0807520:intron | 25.0% |
| !! | CGTAAATGTTGACTAAAAAA+TGG | - | chr5_3:29003395-29003414 | None:intergenic | 25.0% |
| ! | ATAAAGATGATTTCTTTCCT+AGG | + | chr5_3:29003551-29003570 | Msa0807520:intron | 25.0% |
| !! | TATTGTTTTCCTCAAATTTC+AGG | - | chr5_3:29003611-29003630 | None:intergenic | 25.0% |
| ! | TCAAGATACAATGATAGTAT+TGG | + | chr5_3:29003656-29003675 | Msa0807520:intron | 25.0% |
| !!! | AGTATTGGTTATGTATGTTT+TGG | + | chr5_3:29003671-29003690 | Msa0807520:intron | 25.0% |
| ! | CTATATATAAGAGAAGTAGA+TGG | - | chr5_3:29003781-29003800 | None:intergenic | 25.0% |
| ! | TATGAAAGATTTGAAAGCTA+GGG | - | chr5_3:29003816-29003835 | None:intergenic | 25.0% |
| ! | ATATGAAAGATTTGAAAGCT+AGG | - | chr5_3:29003817-29003836 | None:intergenic | 25.0% |
| !!! | GATTGTTTTAATCTCTTTCA+TGG | + | chr5_3:29003918-29003937 | Msa0807520:intron | 25.0% |
| ! | ATCTTGACTACAAAAATCAA+AGG | - | chr5_3:29004005-29004024 | None:intergenic | 25.0% |
| ! | AAATCACTTGACTATAACAA+CGG | + | chr5_3:29004448-29004467 | Msa0807520:intron | 25.0% |
| !!! | GATGAAGTGGTAATTTTTTT+TGG | + | chr5_3:29004817-29004836 | Msa0807520:intron | 25.0% |
| !! | ATATGTGAGTTTAATTTCAG+CGG | - | chr5_3:29004864-29004883 | None:intergenic | 25.0% |
| ! | TAAACTCACATATATTTGTG+AGG | + | chr5_3:29004871-29004890 | Msa0807520:intron | 25.0% |
| !! | AACTTTTCTTCGTTGAAAAT+GGG | - | chr5_3:29005059-29005078 | None:intergenic | 25.0% |
| ! | TCTTGTCTTAAATTTGGAAA+TGG | - | chr5_3:29005190-29005209 | None:intergenic | 25.0% |
| ! | AAATTGTGTGTTAATCTCAA+TGG | + | chr5_3:29005214-29005233 | Msa0807520:intron | 25.0% |
| ! | TATGAAGATATGTTTATGGA+GGG | - | chr5_3:29005622-29005641 | None:intergenic | 25.0% |
| ! | ATAATCAATTAGAGTGAAAG+TGG | - | chr5_3:29005733-29005752 | None:intergenic | 25.0% |
| ! | TACTAAATTTAAGGAAACTC+TGG | + | chr5_3:29005904-29005923 | Msa0807520:intron | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | - | chr5_3:28996384-28996403 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | - | chr5_3:28996384-28996403 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | - | chr5_3:28996384-28996403 | None:intergenic | 25.0% |
| AAAGATTGTGCAAAAACGAA+TGG | + | chr5_3:28996281-28996300 | Msa0807520:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | + | chr5_3:28996383-28996402 | Msa0807520:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | + | chr5_3:28996383-28996402 | Msa0807520:CDS | 30.0% | |
| TGATGTTTATGTCAAAACGT+TGG | + | chr5_3:28996900-28996919 | Msa0807520:intron | 30.0% | |
| ! | CAAAACGTTGGAAGTATATT+TGG | + | chr5_3:28996912-28996931 | Msa0807520:intron | 30.0% |
| ATATCTGCATTATTGGAACA+TGG | + | chr5_3:28997125-28997144 | Msa0807520:intron | 30.0% | |
| ACATGGATTCTTGACATAAA+AGG | + | chr5_3:28997142-28997161 | Msa0807520:intron | 30.0% | |
| ATCATCATGTCAAGAAAATG+GGG | - | chr5_3:28997181-28997200 | None:intergenic | 30.0% | |
| !! | TCATTTCAGTTTTATCCTTC+TGG | - | chr5_3:28997339-28997358 | None:intergenic | 30.0% |
| GAATGCAAGATATGTAGTAA+GGG | + | chr5_3:28997565-28997584 | Msa0807520:intron | 30.0% | |
| TGGCAAAATATAATTGGTTG+AGG | + | chr5_3:28997717-28997736 | Msa0807520:intron | 30.0% | |
| CTAGTGATTGTGCATAAATA+GGG | + | chr5_3:28997755-28997774 | Msa0807520:intron | 30.0% | |
| TAGGGAAAGAATAATCACTA+AGG | + | chr5_3:28997773-28997792 | Msa0807520:intron | 30.0% | |
| AGGGAAAGAATAATCACTAA+GGG | + | chr5_3:28997774-28997793 | Msa0807520:intron | 30.0% | |
| ! | TGGTATCATTTTCACTTATG+TGG | + | chr5_3:28998216-28998235 | Msa0807520:intron | 30.0% |
| !!! | GTTTCTGTTTTTAAAACGTG+TGG | + | chr5_3:28998238-28998257 | Msa0807520:intron | 30.0% |
| ACCAATATACCTAATGTCTT+CGG | + | chr5_3:28998530-28998549 | Msa0807520:intron | 30.0% | |
| !!! | TTTAGTTTTGGGATGTCATT+TGG | + | chr5_3:28998665-28998684 | Msa0807520:intron | 30.0% |
| TAGACAAAGATATTGCATGA+AGG | - | chr5_3:28998733-28998752 | None:intergenic | 30.0% | |
| !! | AAGCGACACTCATTTTAAAA+CGG | - | chr5_3:28998769-28998788 | None:intergenic | 30.0% |
| !! | TTTAAAATGAGTGTCGCTTT+AGG | + | chr5_3:28998770-28998789 | Msa0807520:intron | 30.0% |
| TTGACACACAGATTAAGAAA+TGG | + | chr5_3:28998795-28998814 | Msa0807520:intron | 30.0% | |
| AAATTGTGTGAGAGAAAAGT+TGG | + | chr5_3:28998899-28998918 | Msa0807520:intron | 30.0% | |
| ! | GAATGAGTTTGAAATGATAG+AGG | - | chr5_3:28999341-28999360 | None:intergenic | 30.0% |
| ATTTCAAACTCATTCATGTC+TGG | + | chr5_3:28999346-28999365 | Msa0807520:intron | 30.0% | |
| !! | TCTCTGGAATTATTTGACAA+TGG | + | chr5_3:28999369-28999388 | Msa0807520:intron | 30.0% |
| TTATGTGACATAGTCAAACA+AGG | - | chr5_3:28999574-28999593 | None:intergenic | 30.0% | |
| TGACTATGTCACATAATTAC+AGG | + | chr5_3:28999578-28999597 | Msa0807520:intron | 30.0% | |
| GTGAGATGGATATTCATATT+AGG | - | chr5_3:28999781-28999800 | None:intergenic | 30.0% | |
| ! | TGAAGGAGTTGTAGATTTTT+GGG | - | chr5_3:29000092-29000111 | None:intergenic | 30.0% |
| ! | TTGAAGGAGTTGTAGATTTT+TGG | - | chr5_3:29000093-29000112 | None:intergenic | 30.0% |
| ! | GTAATTTACGTGTTTGTTGA+AGG | - | chr5_3:29000109-29000128 | None:intergenic | 30.0% |
| ATAGAGAATAAAGTAGTTGC+TGG | - | chr5_3:29000131-29000150 | None:intergenic | 30.0% | |
| ! | CATTTCTCTCTTTTCATGAA+AGG | + | chr5_3:29000252-29000271 | Msa0807520:intron | 30.0% |
| GTTAGTGGTGATTTAATGAA+GGG | - | chr5_3:29000289-29000308 | None:intergenic | 30.0% | |
| GTAACATGGTAAAAAAAGGT+GGG | - | chr5_3:29000311-29000330 | None:intergenic | 30.0% | |
| TGTAACATGGTAAAAAAAGG+TGG | - | chr5_3:29000312-29000331 | None:intergenic | 30.0% | |
| AGGTGTAACATGGTAAAAAA+AGG | - | chr5_3:29000315-29000334 | None:intergenic | 30.0% | |
| GACACAACTAAATAAGACTA+GGG | - | chr5_3:29000339-29000358 | None:intergenic | 30.0% | |
| TGACACAACTAAATAAGACT+AGG | - | chr5_3:29000340-29000359 | None:intergenic | 30.0% | |
| ACTTAAAGTTGCACATTAGA+TGG | + | chr5_3:29000420-29000439 | Msa0807520:intron | 30.0% | |
| TCATCAAAGACCATTAGTAA+AGG | - | chr5_3:29000688-29000707 | None:intergenic | 30.0% | |
| TTAATGATTCAATCCAGCAT+AGG | + | chr5_3:29000826-29000845 | Msa0807520:intron | 30.0% | |
| CATCATAATGTTGATACTTC+AGG | - | chr5_3:29000858-29000877 | None:intergenic | 30.0% | |
| ! | GTCGGAATTTGAAATGATAT+AGG | - | chr5_3:29000984-29001003 | None:intergenic | 30.0% |
| CAATCAAAGACCAAATATGT+CGG | - | chr5_3:29001002-29001021 | None:intergenic | 30.0% | |
| CACAACATGCTAAAAATGAT+GGG | - | chr5_3:29001329-29001348 | None:intergenic | 30.0% | |
| ATCCAAATAGTATTAGACAG+AGG | - | chr5_3:29001352-29001371 | None:intergenic | 30.0% | |
| CTATATACCATAGATGCAAA+AGG | + | chr5_3:29001378-29001397 | Msa0807520:intron | 30.0% | |
| TCTTAATTGTTCTTGCTGAT+GGG | - | chr5_3:29001738-29001757 | None:intergenic | 30.0% | |
| TTCTTAATTGTTCTTGCTGA+TGG | - | chr5_3:29001739-29001758 | None:intergenic | 30.0% | |
| ATTAAGAAGAGAGATGATTC+AGG | + | chr5_3:29001751-29001770 | Msa0807520:intron | 30.0% | |
| GTAGATAATCTCAAAGAACT+AGG | - | chr5_3:29001827-29001846 | None:intergenic | 30.0% | |
| AAGGAAATAGGATAGGAAAA+TGG | - | chr5_3:29001947-29001966 | None:intergenic | 30.0% | |
| ! | TTTTTATCCTAGGTATATGC+TGG | + | chr5_3:29001972-29001991 | Msa0807520:intron | 30.0% |
| ATCATACCCAAGAATCATTA+TGG | + | chr5_3:29002545-29002564 | Msa0807520:intron | 30.0% | |
| ATTGGACCATAATGATTCTT+GGG | - | chr5_3:29002554-29002573 | None:intergenic | 30.0% | |
| CAAGAGAATCGATCAAAATA+TGG | - | chr5_3:29002742-29002761 | None:intergenic | 30.0% | |
| ACATCTTATTGTGTGAGTAT+AGG | + | chr5_3:29002835-29002854 | Msa0807520:intron | 30.0% | |
| ! | TGAGTATAGGTGCTATATAT+TGG | + | chr5_3:29002848-29002867 | Msa0807520:intron | 30.0% |
| ! | CTTTTAACCACTAATGTTCA+TGG | - | chr5_3:29002972-29002991 | None:intergenic | 30.0% |
| AAAATATGCTACCTAACAAC+CGG | + | chr5_3:29003221-29003240 | Msa0807520:intron | 30.0% | |
| !!! | AACCATTTTTTTTCCTCTTC+CGG | - | chr5_3:29003243-29003262 | None:intergenic | 30.0% |
| TAGTAATTGCCTGAAATTTG+AGG | + | chr5_3:29003599-29003618 | Msa0807520:intron | 30.0% | |
| !! | TTTTGGTTAGTGAAGAATCA+AGG | + | chr5_3:29003688-29003707 | Msa0807520:intron | 30.0% |
| AAACTAGCATTGCTTATCAA+AGG | + | chr5_3:29003883-29003902 | Msa0807520:intron | 30.0% | |
| TTAAAACAATCATGACCAAG+AGG | - | chr5_3:29003909-29003928 | None:intergenic | 30.0% | |
| ! | ATTTTTATATATGAGTGGCC+TGG | + | chr5_3:29004345-29004364 | Msa0807520:intron | 30.0% |
| !! | ATTCTAAAGTAACCGACTTT+AGG | - | chr5_3:29004532-29004551 | None:intergenic | 30.0% |
| !! | AAATATGAACGCTATTTTCC+AGG | + | chr5_3:29004767-29004786 | Msa0807520:intron | 30.0% |
| AAATACCGAAATTGTAAGGT+CGG | - | chr5_3:29004925-29004944 | None:intergenic | 30.0% | |
| TTGCAAATACCGAAATTGTA+AGG | - | chr5_3:29004929-29004948 | None:intergenic | 30.0% | |
| TGGGTCAAAATTCTAATACA+AGG | - | chr5_3:29005040-29005059 | None:intergenic | 30.0% | |
| ! | GAACTTTTCTTCGTTGAAAA+TGG | - | chr5_3:29005060-29005079 | None:intergenic | 30.0% |
| AACGAAGAAAAGTTCAGATA+AGG | + | chr5_3:29005065-29005084 | Msa0807520:intron | 30.0% | |
| ACGAAGAAAAGTTCAGATAA+GGG | + | chr5_3:29005066-29005085 | Msa0807520:intron | 30.0% | |
| CTATATATAAGAGAGCTAGA+TGG | - | chr5_3:29005253-29005272 | None:intergenic | 30.0% | |
| !!! | GCTGTTTTAATCTCTTTCAT+GGG | + | chr5_3:29005390-29005409 | Msa0807520:intron | 30.0% |
| !!! | CTGTTTTAATCTCTTTCATG+GGG | + | chr5_3:29005391-29005410 | Msa0807520:intron | 30.0% |
| !!! | TGTTTTAATCTCTTTCATGG+GGG | + | chr5_3:29003921-29003940 | Msa0807520:intron | 30.0% |
| AATGGAAATTTATTCCGCTA+TGG | - | chr5_3:29005586-29005605 | None:intergenic | 30.0% | |
| GTATGAAGATATGTTTATGG+AGG | - | chr5_3:29005623-29005642 | None:intergenic | 30.0% | |
| TGTGGATCCTTAATGTAATT+GGG | - | chr5_3:29005664-29005683 | None:intergenic | 30.0% | |
| AAAGATTGTGCAAAAACGAA+TGG | + | chr5_3:28996281-28996300 | Msa0807520:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | + | chr5_3:28996383-28996402 | Msa0807520:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | + | chr5_3:28996383-28996402 | Msa0807520:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | + | chr5_3:28996383-28996402 | Msa0807520:CDS | 30.0% | |
| TGAGACACAACAAAATGATG+TGG | + | chr5_3:28996250-28996269 | Msa0807520:CDS | 35.0% | |
| GCAAAAACGAATGGTAAAGA+CGG | + | chr5_3:28996290-28996309 | Msa0807520:CDS | 35.0% | |
| ! | TGATGCAAGTTCTGATTGTT+GGG | + | chr5_3:28996316-28996335 | Msa0807520:CDS | 35.0% |
| CAAGCACGGAATAAAAATTC+TGG | - | chr5_3:28996959-28996978 | None:intergenic | 35.0% | |
| CTTAGAAGACAACAATTGCT+TGG | + | chr5_3:28997092-28997111 | Msa0807520:intron | 35.0% | |
| CGAATGCAAGATATGTAGTA+AGG | + | chr5_3:28997564-28997583 | Msa0807520:intron | 35.0% | |
| !! | TTATGTTGAGTTGATGAAGG+AGG | + | chr5_3:28997658-28997677 | Msa0807520:intron | 35.0% |
| GCTAGTGATTGTGCATAAAT+AGG | + | chr5_3:28997754-28997773 | Msa0807520:intron | 35.0% | |
| !! | TGCTTTAGGATCAACTAGTA+TGG | + | chr5_3:28998035-28998054 | Msa0807520:intron | 35.0% |
| ! | TCATACTTAAGCCTTTTGGA+TGG | + | chr5_3:28998188-28998207 | Msa0807520:intron | 35.0% |
| ! | TATCCCGGTTCAACATTTTA+AGG | + | chr5_3:28998307-28998326 | Msa0807520:intron | 35.0% |
| ! | ATCCCGGTTCAACATTTTAA+GGG | + | chr5_3:28998308-28998327 | Msa0807520:intron | 35.0% |
| ACTCCCTTAAAATGTTGAAC+CGG | - | chr5_3:28998314-28998333 | None:intergenic | 35.0% | |
| !! | GTTCAACATTTTAAGGGAGT+GGG | + | chr5_3:28998314-28998333 | Msa0807520:intron | 35.0% |
| CCAATATACCTAATGTCTTC+GGG | + | chr5_3:28998531-28998550 | Msa0807520:intron | 35.0% | |
| !!! | GACACTCATTTTAAAACGGA+GGG | - | chr5_3:28998765-28998784 | None:intergenic | 35.0% |
| !! | TCTTTTACTTTGGTCTTTGG+TGG | + | chr5_3:28999048-28999067 | Msa0807520:intron | 35.0% |
| !! | CTTTTACTTTGGTCTTTGGT+GGG | + | chr5_3:28999049-28999068 | Msa0807520:intron | 35.0% |
| TGAACAACTTTGTTAGGGTT+TGG | + | chr5_3:28999239-28999258 | Msa0807520:intron | 35.0% | |
| ATGTCACATAATTACAGGCA+CGG | + | chr5_3:28999583-28999602 | Msa0807520:intron | 35.0% | |
| TGTGACTTGACATTCTACAT+TGG | + | chr5_3:28999645-28999664 | Msa0807520:intron | 35.0% | |
| ACTTGACATTCTACATTGGA+TGG | + | chr5_3:28999649-28999668 | Msa0807520:intron | 35.0% | |
| CATCTCAACACAAAACCTTA+AGG | - | chr5_3:28999725-28999744 | None:intergenic | 35.0% | |
| !! | TAAGGTTTTGTGTTGAGATG+CGG | + | chr5_3:28999725-28999744 | Msa0807520:intron | 35.0% |
| ATGAATATCCATCTCACTGT+AGG | + | chr5_3:28999784-28999803 | Msa0807520:intron | 35.0% | |
| !! | AATCCTTCACTTTTCGTCTT+TGG | + | chr5_3:28999950-28999969 | Msa0807520:intron | 35.0% |
| GGTTAGTGGTGATTTAATGA+AGG | - | chr5_3:29000290-29000309 | None:intergenic | 35.0% | |
| CAACTAAATAAGACTAGGGA+AGG | - | chr5_3:29000335-29000354 | None:intergenic | 35.0% | |
| !! | GTCTTATTTAGTTGTGTCAC+CGG | + | chr5_3:29000341-29000360 | Msa0807520:intron | 35.0% |
| TGCAAAGAGTCTCAAACTTA+AGG | + | chr5_3:29000372-29000391 | Msa0807520:intron | 35.0% | |
| GCAAAGAGTCTCAAACTTAA+GGG | + | chr5_3:29000373-29000392 | Msa0807520:intron | 35.0% | |
| ! | ACATTAGATGGAAGAGCATA+AGG | + | chr5_3:29000432-29000451 | Msa0807520:intron | 35.0% |
| ATACCTTGAGAATTTGGATG+TGG | + | chr5_3:29000491-29000510 | Msa0807520:intron | 35.0% | |
| GTAGGATAACCACAAAAGTA+AGG | - | chr5_3:29000523-29000542 | None:intergenic | 35.0% | |
| CATCACAATGTTGGTACTTT+CGG | - | chr5_3:29000561-29000580 | None:intergenic | 35.0% | |
| ATAATGTTGATACTTCAGGG+AGG | - | chr5_3:29000854-29000873 | None:intergenic | 35.0% | |
| AAGAGAATAAACTGAGTGAC+TGG | - | chr5_3:29001180-29001199 | None:intergenic | 35.0% | |
| !! | TAAAAATGATGGGTTGGTAG+TGG | - | chr5_3:29001319-29001338 | None:intergenic | 35.0% |
| !! | ACATGCTAAAAATGATGGGT+TGG | - | chr5_3:29001325-29001344 | None:intergenic | 35.0% |
| GCACAACATGCTAAAAATGA+TGG | - | chr5_3:29001330-29001349 | None:intergenic | 35.0% | |
| TGCCTCTGTCTAATACTATT+TGG | + | chr5_3:29001347-29001366 | Msa0807520:intron | 35.0% | |
| AGAGAGATGATTCAGGTATA+AGG | + | chr5_3:29001758-29001777 | Msa0807520:intron | 35.0% | |
| AATCTCAAAGAACTAGGAAG+TGG | - | chr5_3:29001821-29001840 | None:intergenic | 35.0% | |
| TGAGATTATCTACTGTTCGA+TGG | + | chr5_3:29001834-29001853 | Msa0807520:intron | 35.0% | |
| TTCTAATCCAGCATATACCT+AGG | - | chr5_3:29001982-29002001 | None:intergenic | 35.0% | |
| CATTGGACCATAATGATTCT+TGG | - | chr5_3:29002555-29002574 | None:intergenic | 35.0% | |
| TCATAGTCTCAAGTGTAACA+AGG | - | chr5_3:29003140-29003159 | None:intergenic | 35.0% | |
| AACCGGAAGAGGAAAAAAAA+TGG | + | chr5_3:29003238-29003257 | Msa0807520:intron | 35.0% | |
| TAAAGCTTGGAAGAAACGTA+TGG | + | chr5_3:29003264-29003283 | Msa0807520:intron | 35.0% | |
| GAAACGTATGGAAAAGAAGA+AGG | + | chr5_3:29003276-29003295 | Msa0807520:intron | 35.0% | |
| TCTATGAGTCATAGTACACT+TGG | - | chr5_3:29003513-29003532 | None:intergenic | 35.0% | |
| AAGATGATTTCTTTCCTAGG+AGG | + | chr5_3:29003554-29003573 | Msa0807520:intron | 35.0% | |
| ! | CTTTCCTAGGAGGTTTTTAA+TGG | + | chr5_3:29003564-29003583 | Msa0807520:intron | 35.0% |
| TAAGAGAAGTAGATGGTAAG+TGG | - | chr5_3:29003774-29003793 | None:intergenic | 35.0% | |
| CTCATTCTTTCATGAGATTG+AGG | - | chr5_3:29003971-29003990 | None:intergenic | 35.0% | |
| TCATTTATGGTCAAGTCTAC+AGG | - | chr5_3:29004102-29004121 | None:intergenic | 35.0% | |
| TGAGACAAAGCAAAATGATG+TGG | + | chr5_3:29004265-29004284 | Msa0807520:CDS | 35.0% | |
| TAAGTTCAAACATCAGACTC+AGG | - | chr5_3:29004400-29004419 | None:intergenic | 35.0% | |
| !!! | TTTTTGGGTCTTAGATGAAG+TGG | + | chr5_3:29004804-29004823 | Msa0807520:intron | 35.0% |
| !!! | GGCTGTTTTAATCTCTTTCA+TGG | + | chr5_3:29005389-29005408 | Msa0807520:intron | 35.0% |
| ! | CTCATTCTTTCTAGAGATTG+AGG | - | chr5_3:29005442-29005461 | None:intergenic | 35.0% |
| ! | GACAATTTTACCTCCTTACA+AGG | + | chr5_3:29005545-29005564 | Msa0807520:intron | 35.0% |
| ! | AATTCTATAGGAGCCTTGTA+AGG | - | chr5_3:29005561-29005580 | None:intergenic | 35.0% |
| TCCTATAGAATTGACCATAG+CGG | + | chr5_3:29005569-29005588 | Msa0807520:intron | 35.0% | |
| TTATGGAGGGAAATTGAACA+TGG | - | chr5_3:29005609-29005628 | None:intergenic | 35.0% | |
| GTCTATCCCCAATTACATTA+AGG | + | chr5_3:29005654-29005673 | Msa0807520:intron | 35.0% | |
| GTGGATCCTTAATGTAATTG+GGG | - | chr5_3:29005663-29005682 | None:intergenic | 35.0% | |
| GTGTGGATCCTTAATGTAAT+TGG | - | chr5_3:29005665-29005684 | None:intergenic | 35.0% | |
| TAGAGTGAAAGTGGTGAAAA+TGG | - | chr5_3:29005724-29005743 | None:intergenic | 35.0% | |
| TGAGACACAACAAAATGATG+TGG | + | chr5_3:28996250-28996269 | Msa0807520:CDS | 35.0% | |
| GCAAAAACGAATGGTAAAGA+CGG | + | chr5_3:28996290-28996309 | Msa0807520:CDS | 35.0% | |
| ! | TGATGCAAGTTCTGATTGTT+GGG | + | chr5_3:28996316-28996335 | Msa0807520:CDS | 35.0% |
| ATGTTGTCTAAATGGATCAC+GGG | - | chr5_3:29006208-29006227 | None:intergenic | 35.0% | |
| GATGTTGTCTAAATGGATCA+CGG | - | chr5_3:29006209-29006228 | None:intergenic | 35.0% | |
| AAAACGAATGGTAAAGACGG+TGG | + | chr5_3:28996293-28996312 | Msa0807520:CDS | 40.0% | |
| ! | GTGATGCAAGTTCTGATTGT+TGG | + | chr5_3:28996315-28996334 | Msa0807520:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | - | chr5_3:28996345-28996364 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | - | chr5_3:28996346-28996365 | None:intergenic | 40.0% | |
| ! | TGGTGCAAGTTCTGATTGTT+GGG | + | chr5_3:28996454-28996473 | Msa0807520:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | - | chr5_3:28996345-28996364 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | - | chr5_3:28996346-28996365 | None:intergenic | 40.0% | |
| ATGTGGTCTAAATGGATCAC+GGG | - | chr5_3:28996345-28996364 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | - | chr5_3:28996346-28996365 | None:intergenic | 40.0% | |
| GAGGTTGCTACAAAGCAATT+AGG | + | chr5_3:28996656-28996675 | Msa0807520:intron | 40.0% | |
| GTTGCTACAAAGCAATTAGG+AGG | + | chr5_3:28996659-28996678 | Msa0807520:intron | 40.0% | |
| ACATGATTTGACCCACGTAA+GGG | - | chr5_3:28996766-28996785 | None:intergenic | 40.0% | |
| ! | TAATGGACAATGGCACACAA+AGG | - | chr5_3:28996796-28996815 | None:intergenic | 40.0% |
| ! | AGATATGTCACTTGCAAGCA+CGG | - | chr5_3:28996973-28996992 | None:intergenic | 40.0% |
| TTGCAGTAAACACAACCAGA+AGG | + | chr5_3:28997321-28997340 | Msa0807520:intron | 40.0% | |
| ATGCCATCTTTCTCATTCTC+TGG | + | chr5_3:28997365-28997384 | Msa0807520:intron | 40.0% | |
| CTTCCAGAGAATGAGAAAGA+TGG | - | chr5_3:28997371-28997390 | None:intergenic | 40.0% | |
| CATCTTTCTCATTCTCTGGA+AGG | + | chr5_3:28997369-28997388 | Msa0807520:intron | 40.0% | |
| !! | CTCTACTAGAGAGTACCAAA+GGG | - | chr5_3:28997834-28997853 | None:intergenic | 40.0% |
| !! | ACTCTACTAGAGAGTACCAA+AGG | - | chr5_3:28997835-28997854 | None:intergenic | 40.0% |
| GGTACTCTCTAGTAGAGTAA+TGG | + | chr5_3:28997837-28997856 | Msa0807520:intron | 40.0% | |
| TGTCAGTTAAAGTCGAACGT+TGG | + | chr5_3:28998125-28998144 | Msa0807520:intron | 40.0% | |
| ! | AACGTTGGATAAAAGAGTGC+AGG | + | chr5_3:28998140-28998159 | Msa0807520:intron | 40.0% |
| ATACCACATCTCCATCCAAA+AGG | - | chr5_3:28998202-28998221 | None:intergenic | 40.0% | |
| TAAAACGTGTGGATCCATGT+CGG | + | chr5_3:28998249-28998268 | Msa0807520:intron | 40.0% | |
| ACAACAGTTGCATGATATCC+CGG | + | chr5_3:28998292-28998311 | Msa0807520:intron | 40.0% | |
| CTCCCTTAAAATGTTGAACC+GGG | - | chr5_3:28998313-28998332 | None:intergenic | 40.0% | |
| !! | GGTTCAACATTTTAAGGGAG+TGG | + | chr5_3:28998313-28998332 | Msa0807520:intron | 40.0% |
| ACGAAGAGTCTGACACTTAA+TGG | + | chr5_3:28998364-28998383 | Msa0807520:intron | 40.0% | |
| CCCGAAGACATTAGGTATAT+TGG | - | chr5_3:28998534-28998553 | None:intergenic | 40.0% | |
| ATCTCAAACCCGAAGACATT+AGG | - | chr5_3:28998542-28998561 | None:intergenic | 40.0% | |
| ! | TCGGGTTTGAGATAGATATG+TGG | + | chr5_3:28998549-28998568 | Msa0807520:intron | 40.0% |
| TGTGGAGTCTATCTTACTTG+TGG | + | chr5_3:28998567-28998586 | Msa0807520:intron | 40.0% | |
| AGAGGGATCTTACAACAGAT+TGG | - | chr5_3:28998619-28998638 | None:intergenic | 40.0% | |
| !!! | CGACACTCATTTTAAAACGG+AGG | - | chr5_3:28998766-28998785 | None:intergenic | 40.0% |
| TGTGAGAGAAAAGTTGGAGA+GGG | + | chr5_3:28998905-28998924 | Msa0807520:intron | 40.0% | |
| AAAGTTGGAGAGGGTAAAGT+TGG | + | chr5_3:28998914-28998933 | Msa0807520:intron | 40.0% | |
| !!! | TGACACTCATTTTGAAACGG+AGG | + | chr5_3:28999009-28999028 | Msa0807520:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr5_3:28999010-28999029 | Msa0807520:intron | 40.0% |
| CGATGTCAATATCACTTGTG+TGG | + | chr5_3:28999151-28999170 | Msa0807520:intron | 40.0% | |
| TGGTTGCTCTTAGCCTAATA+CGG | + | chr5_3:28999171-28999190 | Msa0807520:intron | 40.0% | |
| !! | TTAGGTTGGATCACCGTATT+AGG | - | chr5_3:28999187-28999206 | None:intergenic | 40.0% |
| TCCATGTAGTCAATGCCTTA+AGG | + | chr5_3:28999707-28999726 | Msa0807520:intron | 40.0% | |
| !! | ACCTTAAGGCATTGACTACA+TGG | - | chr5_3:28999711-28999730 | None:intergenic | 40.0% |
| ATTGGATGTCATTCGCTTTC+AGG | + | chr5_3:28999895-28999914 | Msa0807520:intron | 40.0% | |
| !! | CTTCACTTTTCGTCTTTGGT+GGG | + | chr5_3:28999954-28999973 | Msa0807520:intron | 40.0% |
| TCTTTGGTGGGATTTGACAA+TGG | + | chr5_3:28999966-28999985 | Msa0807520:intron | 40.0% | |
| CTTTGGTGGGATTTGACAAT+GGG | + | chr5_3:28999967-28999986 | Msa0807520:intron | 40.0% | |
| GGGATTTGACAATGGGAAAT+TGG | + | chr5_3:28999974-28999993 | Msa0807520:intron | 40.0% | |
| !! | GGTAAAAAAAGGTGGGTTAG+TGG | - | chr5_3:29000304-29000323 | None:intergenic | 40.0% |
| GACTCTTTGCATCTATGATC+CGG | - | chr5_3:29000363-29000382 | None:intergenic | 40.0% | |
| TATGGAGTCTTCTCGCTTAT+AGG | - | chr5_3:29000465-29000484 | None:intergenic | 40.0% | |
| ACACCACATCCAAATTCTCA+AGG | - | chr5_3:29000497-29000516 | None:intergenic | 40.0% | |
| !! | TGGTGTCAACCTTACTTTTG+TGG | + | chr5_3:29000511-29000530 | Msa0807520:intron | 40.0% |
| CAATGTTGGTACTTTCGGAT+GGG | - | chr5_3:29000556-29000575 | None:intergenic | 40.0% | |
| ACAATGTTGGTACTTTCGGA+TGG | - | chr5_3:29000557-29000576 | None:intergenic | 40.0% | |
| !! | CGAAAGTACCAACATTGTGA+TGG | + | chr5_3:29000559-29000578 | Msa0807520:intron | 40.0% |
| TAAGAGCAGCTACACAAGTA+AGG | - | chr5_3:29000799-29000818 | None:intergenic | 40.0% | |
| CTGAGTGACTGGTAATTTCA+TGG | - | chr5_3:29001169-29001188 | None:intergenic | 40.0% | |
| GTGTATCAATCTCACTTGTG+TGG | + | chr5_3:29001434-29001453 | Msa0807520:intron | 40.0% | |
| TACTGTTCGATGGTCAAGAT+AGG | + | chr5_3:29001844-29001863 | Msa0807520:intron | 40.0% | |
| ACTGTTCGATGGTCAAGATA+GGG | + | chr5_3:29001845-29001864 | Msa0807520:intron | 40.0% | |
| CATATCCCTACCATCAAACA+TGG | + | chr5_3:29002297-29002316 | Msa0807520:intron | 40.0% | |
| ! | CTACACCATGTTTGATGGTA+GGG | - | chr5_3:29002305-29002324 | None:intergenic | 40.0% |
| ! | ACTACACCATGTTTGATGGT+AGG | - | chr5_3:29002306-29002325 | None:intergenic | 40.0% |
| CTAGACTACACCATGTTTGA+TGG | - | chr5_3:29002310-29002329 | None:intergenic | 40.0% | |
| TTAAGCCCTTCGAGTATCTT+TGG | + | chr5_3:29002369-29002388 | Msa0807520:intron | 40.0% | |
| TAGCTCCAAAGATACTCGAA+GGG | - | chr5_3:29002377-29002396 | None:intergenic | 40.0% | |
| !!! | TGGTTGGCATACTTTTTTGC+AGG | + | chr5_3:29002771-29002790 | Msa0807520:intron | 40.0% |
| GTCAATCCCATGAACATTAG+TGG | + | chr5_3:29002962-29002981 | Msa0807520:intron | 40.0% | |
| CTCAAGTGTAACAAGGTAAG+TGG | - | chr5_3:29003133-29003152 | None:intergenic | 40.0% | |
| ! | TTTTTCCTCTTCCGGTTGTT+AGG | - | chr5_3:29003235-29003254 | None:intergenic | 40.0% |
| CACTCCATTAAAAACCTCCT+AGG | - | chr5_3:29003571-29003590 | None:intergenic | 40.0% | |
| !! | GTGAAGAATCAAGGCATTGA+AGG | + | chr5_3:29003697-29003716 | Msa0807520:intron | 40.0% |
| !! | GTACCAATTTGGCCTTGATT+TGG | - | chr5_3:29003723-29003742 | None:intergenic | 40.0% |
| ATTGCTTATCAAAGGCCTCT+TGG | + | chr5_3:29003891-29003910 | Msa0807520:intron | 40.0% | |
| TCTCTTTCATGGTTGAAGCT+AGG | + | chr5_3:29003929-29003948 | Msa0807520:intron | 40.0% | |
| !! | TCTACAGGAGCATTGTACAA+AGG | - | chr5_3:29004087-29004106 | None:intergenic | 40.0% |
| TCTATCCTTCTTACGTGTGT+CGG | - | chr5_3:29004375-29004394 | None:intergenic | 40.0% | |
| TTAAAACAGCCATGACCATG+AGG | - | chr5_3:29005380-29005399 | None:intergenic | 40.0% | |
| TCCGCTATGGTCAATTCTAT+AGG | - | chr5_3:29005573-29005592 | None:intergenic | 40.0% | |
| GAGGGAAATTGAACATGGAA+TGG | - | chr5_3:29005604-29005623 | None:intergenic | 40.0% | |
| AAAACGAATGGTAAAGACGG+TGG | + | chr5_3:28996293-28996312 | Msa0807520:CDS | 40.0% | |
| ! | GTGATGCAAGTTCTGATTGT+TGG | + | chr5_3:28996315-28996334 | Msa0807520:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | - | chr5_3:28996345-28996364 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | - | chr5_3:28996346-28996365 | None:intergenic | 40.0% | |
| ! | TGGTGCAAGTTCTGATTGTT+GGG | + | chr5_3:28996454-28996473 | Msa0807520:CDS | 40.0% |
| TGTTGTCTAAATGGATCACG+GGG | - | chr5_3:29006207-29006226 | None:intergenic | 40.0% | |
| !! | GATGGTGGATGTTGTCTAAA+TGG | - | chr5_3:29006216-29006235 | None:intergenic | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | - | chr5_3:28996345-28996364 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | - | chr5_3:28996346-28996365 | None:intergenic | 40.0% | |
| ! | TGGTGCAAGTTCTGATTGTT+GGG | + | chr5_3:28996454-28996473 | Msa0807520:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | - | chr5_3:28996345-28996364 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | - | chr5_3:28996346-28996365 | None:intergenic | 40.0% | |
| GAGGTTGCTACAAAGCAATT+AGG | + | chr5_3:28996656-28996675 | Msa0807520:intron | 40.0% | |
| GTTGCTACAAAGCAATTAGG+AGG | + | chr5_3:28996659-28996678 | Msa0807520:intron | 40.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | - | chr5_3:28996353-28996372 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+TGG | + | chr5_3:28996434-28996453 | Msa0807520:CDS | 45.0% | |
| ! | GTGGTGCAAGTTCTGATTGT+TGG | + | chr5_3:28996453-28996472 | Msa0807520:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | - | chr5_3:28996344-28996363 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | - | chr5_3:28996353-28996372 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+AGG | + | chr5_3:28996434-28996453 | Msa0807520:CDS | 45.0% | |
| ! | AGGTGCAGGTTCTGATTGTT+GGG | + | chr5_3:28996592-28996611 | Msa0807520:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | - | chr5_3:28996344-28996363 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | - | chr5_3:28996353-28996372 | None:intergenic | 45.0% |
| !! | TCAACTACAGATGGTGGATG+TGG | - | chr5_3:28996638-28996657 | None:intergenic | 45.0% |
| ACATCCACCATCTGTAGTTG+AGG | + | chr5_3:28996637-28996656 | Msa0807520:CDS | 45.0% | |
| GTAGCAACCTCAACTACAGA+TGG | - | chr5_3:28996647-28996666 | None:intergenic | 45.0% | |
| ATGATTTGACCCACGTAAGG+GGG | - | chr5_3:28996764-28996783 | None:intergenic | 45.0% | |
| CATGATTTGACCCACGTAAG+GGG | - | chr5_3:28996765-28996784 | None:intergenic | 45.0% | |
| CACATGATTTGACCCACGTA+AGG | - | chr5_3:28996767-28996786 | None:intergenic | 45.0% | |
| GGTTGAGGTAAATGGACATG+TGG | + | chr5_3:28997732-28997751 | Msa0807520:intron | 45.0% | |
| ! | AAGCCTTTTGGATGGAGATG+TGG | + | chr5_3:28998196-28998215 | Msa0807520:intron | 45.0% |
| !! | ACATTTTAAGGGAGTGGGAG+TGG | + | chr5_3:28998319-28998338 | Msa0807520:intron | 45.0% |
| GTGTGAGAGAAAAGTTGGAG+AGG | + | chr5_3:28998904-28998923 | Msa0807520:intron | 45.0% | |
| AGATGAAGCCTGCATTAGGT+TGG | - | chr5_3:28999201-28999220 | None:intergenic | 45.0% | |
| ACTCATTCATGTCTGGTCTC+TGG | + | chr5_3:28999353-28999372 | Msa0807520:intron | 45.0% | |
| GACTGGAAGTGGTTTCATGA+AGG | - | chr5_3:28999519-28999538 | None:intergenic | 45.0% | |
| CACATAATTACAGGCACGGA+TGG | + | chr5_3:28999587-28999606 | Msa0807520:intron | 45.0% | |
| ! | CGGTGTCAATCTCACTTGTA+TGG | + | chr5_3:28999745-28999764 | Msa0807520:intron | 45.0% |
| CCACCAAAGACGAAAAGTGA+AGG | - | chr5_3:28999956-28999975 | None:intergenic | 45.0% | |
| !! | CCTTCACTTTTCGTCTTTGG+TGG | + | chr5_3:28999953-28999972 | Msa0807520:intron | 45.0% |
| ! | AGACTAGGGAAGGTGTAACA+TGG | - | chr5_3:29000325-29000344 | None:intergenic | 45.0% |
| GTGGTTATCCTACCCTGTTT+AGG | + | chr5_3:29000530-29000549 | Msa0807520:intron | 45.0% | |
| ATGCAAAAGGCTCGCACTTA+AGG | + | chr5_3:29001391-29001410 | Msa0807520:intron | 45.0% | |
| TGCAAAAGGCTCGCACTTAA+GGG | + | chr5_3:29001392-29001411 | Msa0807520:intron | 45.0% | |
| !! | TGTGGCTGTTCTCGTTTTTG+TGG | + | chr5_3:29001452-29001471 | Msa0807520:intron | 45.0% |
| GGTGTAGTCTAGCAGTGTAA+AGG | + | chr5_3:29002318-29002337 | Msa0807520:intron | 45.0% | |
| CTAGCTCCAAAGATACTCGA+AGG | - | chr5_3:29002378-29002397 | None:intergenic | 45.0% | |
| !! | CTTCGAGTATCTTTGGAGCT+AGG | + | chr5_3:29002376-29002395 | Msa0807520:intron | 45.0% |
| !! | AGGCATTGAAGGCCAAATCA+AGG | + | chr5_3:29003708-29003727 | Msa0807520:intron | 45.0% |
| AGGCCAAATCAAGGCCAAAT+TGG | + | chr5_3:29003717-29003736 | Msa0807520:intron | 45.0% | |
| ATGGTTGAAGCTAGGCACTT+GGG | + | chr5_3:29003937-29003956 | Msa0807520:intron | 45.0% | |
| CTATCCTTCTTACGTGTGTC+GGG | - | chr5_3:29004374-29004393 | None:intergenic | 45.0% | |
| GACGTCCGACCTTACAATTT+CGG | + | chr5_3:29004917-29004936 | Msa0807520:intron | 45.0% | |
| TAAGAGAGCTAGATGGTGAG+TGG | - | chr5_3:29005246-29005265 | None:intergenic | 45.0% | |
| CATTGCTTATCCAAGCCTCA+TGG | + | chr5_3:29005362-29005381 | Msa0807520:intron | 45.0% | |
| TTATCCAAGCCTCATGGTCA+TGG | + | chr5_3:29005368-29005387 | Msa0807520:intron | 45.0% | |
| ! | TCTATAGGAGCCTTGTAAGG+AGG | - | chr5_3:29005558-29005577 | None:intergenic | 45.0% |
| !! | GATGGTGGATGTGGTCTAAA+TGG | - | chr5_3:28996353-28996372 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+TGG | + | chr5_3:28996434-28996453 | Msa0807520:CDS | 45.0% | |
| ! | GTGGTGCAAGTTCTGATTGT+TGG | + | chr5_3:28996453-28996472 | Msa0807520:CDS | 45.0% |
| ACAAGTGCTAAAGACAGTCG+AGG | + | chr5_3:28996434-28996453 | Msa0807520:CDS | 45.0% | |
| ! | AGGTGCAGGTTCTGATTGTT+GGG | + | chr5_3:28996592-28996611 | Msa0807520:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | - | chr5_3:28996344-28996363 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | - | chr5_3:28996353-28996372 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+TGG | + | chr5_3:28996434-28996453 | Msa0807520:CDS | 45.0% | |
| ! | GTGGTGCAAGTTCTGATTGT+TGG | + | chr5_3:28996453-28996472 | Msa0807520:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | - | chr5_3:28996344-28996363 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | - | chr5_3:28996353-28996372 | None:intergenic | 45.0% |
| !! | TCAACTACAGATGGTGGATG+TGG | - | chr5_3:28996638-28996657 | None:intergenic | 45.0% |
| ACATCCACCATCTGTAGTTG+AGG | + | chr5_3:28996637-28996656 | Msa0807520:CDS | 45.0% | |
| GTAGCAACCTCAACTACAGA+TGG | - | chr5_3:28996647-28996666 | None:intergenic | 45.0% | |
| !!! | TTTAATTAAGTTTAATTTTT+TGG | + | chr5_3:28999465-28999484 | Msa0807520:intron | 5.0% |
| !!! | ACTTTTTTATTTTAATTTTT+TGG | + | chr5_3:29000055-29000074 | Msa0807520:intron | 5.0% |
| !!! | AATTTTATTTTATTTGAATA+TGG | + | chr5_3:29004226-29004245 | Msa0807520:intron | 5.0% |
| ! | GAGGTGCAGGTTCTGATTGT+TGG | + | chr5_3:28996591-28996610 | Msa0807520:CDS | 50.0% |
| GCAACCTCAACTACAGATGG+TGG | - | chr5_3:28996644-28996663 | None:intergenic | 50.0% | |
| CACTCATCTTCTCGACAGCA+AGG | - | chr5_3:28997489-28997508 | None:intergenic | 50.0% | |
| AAGTCTCTCCTCTCTCCCTT+TGG | + | chr5_3:28997816-28997835 | Msa0807520:intron | 50.0% | |
| !! | AGAGAGTACCAAAGGGAGAG+AGG | - | chr5_3:28997827-28997846 | None:intergenic | 50.0% |
| ACGAAATTCTAGCCCGTGCT+TGG | - | chr5_3:28998070-28998089 | None:intergenic | 50.0% | |
| ! | TGGTTCTTGGTGGTCGATCA+CGG | + | chr5_3:28998339-28998358 | Msa0807520:intron | 50.0% |
| ACGGTGATCCAACCTAATGC+AGG | + | chr5_3:28999190-28999209 | Msa0807520:intron | 50.0% | |
| CGGTAGATGAAGCCTGCATT+AGG | - | chr5_3:28999205-28999224 | None:intergenic | 50.0% | |
| !! | TCAAGAAGGTGGACTGGAAG+TGG | - | chr5_3:28999530-28999549 | None:intergenic | 50.0% |
| ACGTGTTCAAGAAGGTGGAC+TGG | - | chr5_3:28999536-28999555 | None:intergenic | 50.0% | |
| CCACAACGTGTTCAAGAAGG+TGG | - | chr5_3:28999541-28999560 | None:intergenic | 50.0% | |
| CCACCTTCTTGAACACGTTG+TGG | + | chr5_3:28999538-28999557 | Msa0807520:intron | 50.0% | |
| GAGCCACAACGTGTTCAAGA+AGG | - | chr5_3:28999544-28999563 | None:intergenic | 50.0% | |
| CTTTCGGATGGGCCTAAACA+GGG | - | chr5_3:29000545-29000564 | None:intergenic | 50.0% | |
| ACTTTCGGATGGGCCTAAAC+AGG | - | chr5_3:29000546-29000565 | None:intergenic | 50.0% | |
| ! | GTGCGAGCCTTTTGCATCTA+TGG | - | chr5_3:29001388-29001407 | None:intergenic | 50.0% |
| CGATGTCGACATGTTAGTGC+TGG | - | chr5_3:29003079-29003098 | None:intergenic | 50.0% | |
| TGCTACCTAACAACCGGAAG+AGG | + | chr5_3:29003227-29003246 | Msa0807520:intron | 50.0% | |
| CATGGTTGAAGCTAGGCACT+TGG | + | chr5_3:29003936-29003955 | Msa0807520:intron | 50.0% | |
| TGAGGACTCGTGTTCGAAAC+CGG | + | chr5_3:29004889-29004908 | Msa0807520:intron | 50.0% | |
| AGCTAGATGGTGAGTGGACA+AGG | - | chr5_3:29005240-29005259 | None:intergenic | 50.0% | |
| TCTCTTTCATGGGGGAAGCA+AGG | + | chr5_3:29005400-29005419 | Msa0807520:intron | 50.0% | |
| ! | GAGGTGCAGGTTCTGATTGT+TGG | + | chr5_3:28996591-28996610 | Msa0807520:CDS | 50.0% |
| GCAACCTCAACTACAGATGG+TGG | - | chr5_3:28996644-28996663 | None:intergenic | 50.0% | |
| !! | GCAGCTACTGATGGTGGATG+TGG | - | chr5_3:28996362-28996381 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACTGA+TGG | - | chr5_3:28996371-28996390 | None:intergenic | 55.0% | |
| !! | GCAGCTACAGATGGTGGATG+TGG | - | chr5_3:28996500-28996519 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACAGA+TGG | - | chr5_3:28996509-28996528 | None:intergenic | 55.0% | |
| GCTAAAGACAGTCGAGGTGC+AGG | + | chr5_3:28996578-28996597 | Msa0807520:CDS | 55.0% | |
| ! | AAGGGGGCATGTTGCATGTG+TGG | - | chr5_3:28996748-28996767 | None:intergenic | 55.0% |
| ATGCAACATGCCCCCTTACG+TGG | + | chr5_3:28996751-28996770 | Msa0807520:intron | 55.0% | |
| TGCAACATGCCCCCTTACGT+GGG | + | chr5_3:28996752-28996771 | Msa0807520:intron | 55.0% | |
| ATTCTAGCCCGTGCTTGGCA+CGG | - | chr5_3:28998065-28998084 | None:intergenic | 55.0% | |
| GTGTGGATCCATGTCGGTGT+TGG | + | chr5_3:28998255-28998274 | Msa0807520:intron | 55.0% | |
| AAGGGAGTGGGAGTGGTTCT+TGG | + | chr5_3:28998326-28998345 | Msa0807520:intron | 55.0% | |
| ! | GGTTCTTGGTGGTCGATCAC+GGG | + | chr5_3:28998340-28998359 | Msa0807520:intron | 55.0% |
| CTGGTCAGCCTACAGTGAGA+TGG | - | chr5_3:28999795-28999814 | None:intergenic | 55.0% | |
| CATCTCACTGTAGGCTGACC+AGG | + | chr5_3:28999793-28999812 | Msa0807520:intron | 55.0% | |
| GTGACCCGACACACGTAAGA+AGG | + | chr5_3:29004367-29004386 | Msa0807520:intron | 55.0% | |
| GAGGACTCGTGTTCGAAACC+GGG | + | chr5_3:29004890-29004909 | Msa0807520:intron | 55.0% | |
| TAAGGTCGGACGTCATGACC+CGG | - | chr5_3:29004911-29004930 | None:intergenic | 55.0% | |
| ACAGCCATGACCATGAGGCT+TGG | - | chr5_3:29005375-29005394 | None:intergenic | 55.0% | |
| ! | ATGGGGGAAGCAAGGCACTT+GGG | + | chr5_3:29005408-29005427 | Msa0807520:intron | 55.0% |
| !! | GCAGCTACTGATGGTGGATG+TGG | - | chr5_3:28996362-28996381 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACTGA+TGG | - | chr5_3:28996371-28996390 | None:intergenic | 55.0% | |
| GTAACCTCGGCAGCTACAGA+TGG | - | chr5_3:28996509-28996528 | None:intergenic | 55.0% | |
| GCTAAAGACAGTCGAGGTGC+AGG | + | chr5_3:28996578-28996597 | Msa0807520:CDS | 55.0% | |
| !! | GCAGCTACTGATGGTGGATG+TGG | - | chr5_3:28996362-28996381 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACTGA+TGG | - | chr5_3:28996371-28996390 | None:intergenic | 55.0% | |
| TCCACCATCAGTAGCTGCCG+AGG | + | chr5_3:28996364-28996383 | Msa0807520:CDS | 60.0% | |
| ACCTCGGCAGCTACTGATGG+TGG | - | chr5_3:28996368-28996387 | None:intergenic | 60.0% | |
| TCCACCATCTGTAGCTGCCG+AGG | + | chr5_3:28996502-28996521 | Msa0807520:CDS | 60.0% | |
| ACCTCGGCAGCTACAGATGG+TGG | - | chr5_3:28996506-28996525 | None:intergenic | 60.0% | |
| ATGGACACCCGTGCCAAGCA+CGG | + | chr5_3:28998054-28998073 | Msa0807520:intron | 60.0% | |
| TTCTAGCCCGTGCTTGGCAC+GGG | - | chr5_3:28998064-28998083 | None:intergenic | 60.0% | |
| TGAGCGAGCCAACACCGACA+TGG | - | chr5_3:28998266-28998285 | None:intergenic | 60.0% | |
| GGAGTGGGAGTGGTTCTTGG+TGG | + | chr5_3:28998329-28998348 | Msa0807520:intron | 60.0% | |
| CGGATGGGCCTAAACAGGGT+AGG | - | chr5_3:29000541-29000560 | None:intergenic | 60.0% | |
| CTTCAGGGAGGAGCCTATGC+TGG | - | chr5_3:29000842-29000861 | None:intergenic | 60.0% | |
| CTTACGTGTGTCGGGTCACC+AGG | - | chr5_3:29004366-29004385 | None:intergenic | 60.0% | |
| ! | CATGGGGGAAGCAAGGCACT+TGG | + | chr5_3:29005407-29005426 | Msa0807520:intron | 60.0% |
| TCCACCATCAGTAGCTGCCG+AGG | + | chr5_3:28996364-28996383 | Msa0807520:CDS | 60.0% | |
| ACCTCGGCAGCTACTGATGG+TGG | - | chr5_3:28996368-28996387 | None:intergenic | 60.0% | |
| TCCACCATCTGTAGCTGCCG+AGG | + | chr5_3:28996502-28996521 | Msa0807520:CDS | 60.0% | |
| ACCTCGGCAGCTACAGATGG+TGG | - | chr5_3:28996506-28996525 | None:intergenic | 60.0% | |
| TCCACCATCAGTAGCTGCCG+AGG | + | chr5_3:28996364-28996383 | Msa0807520:CDS | 60.0% | |
| ACCTCGGCAGCTACTGATGG+TGG | - | chr5_3:28996368-28996387 | None:intergenic | 60.0% | |
| TGGACACCCGTGCCAAGCAC+GGG | + | chr5_3:28998055-28998074 | Msa0807520:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 28996230 | 29006557 | 28996230 | ID=Msa0807520;Name=Msa0807520 |
| chr5_3 | mRNA | 28996230 | 29006557 | 28996230 | ID=Msa0807520-mRNA-1;Parent=Msa0807520;Name=Msa0807520-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|0|0.2|5|0|358 |
| chr5_3 | exon | 28996230 | 28996404 | 28996230 | ID=Msa0807520-mRNA-1:exon:10170;Parent=Msa0807520-mRNA-1 |
| chr5_3 | exon | 28996423 | 28996658 | 28996423 | ID=Msa0807520-mRNA-1:exon:10171;Parent=Msa0807520-mRNA-1 |
| chr5_3 | exon | 29003870 | 29003876 | 29003870 | ID=Msa0807520-mRNA-1:exon:10172;Parent=Msa0807520-mRNA-1 |
| chr5_3 | exon | 29004264 | 29004338 | 29004264 | ID=Msa0807520-mRNA-1:exon:10173;Parent=Msa0807520-mRNA-1 |
| chr5_3 | exon | 29005974 | 29006557 | 29005974 | ID=Msa0807520-mRNA-1:exon:10174;Parent=Msa0807520-mRNA-1 |
| chr5_3 | CDS | 28996230 | 28996404 | 28996230 | ID=Msa0807520-mRNA-1:cds;Parent=Msa0807520-mRNA-1 |
| chr5_3 | CDS | 28996423 | 28996658 | 28996423 | ID=Msa0807520-mRNA-1:cds;Parent=Msa0807520-mRNA-1 |
| chr5_3 | CDS | 29003870 | 29003876 | 29003870 | ID=Msa0807520-mRNA-1:cds;Parent=Msa0807520-mRNA-1 |
| chr5_3 | CDS | 29004264 | 29004338 | 29004264 | ID=Msa0807520-mRNA-1:cds;Parent=Msa0807520-mRNA-1 |
| chr5_3 | CDS | 29005974 | 29006557 | 29005974 | ID=Msa0807520-mRNA-1:cds;Parent=Msa0807520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
