Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736630 | AES99159.1 | 61.238 | 307 | 63 | 8 | 6 | 286 | 28 | 304 | 4.05e-99 | 308 |
| Msa0736630 | AES99159.1 | 70.130 | 308 | 69 | 5 | 135 | 423 | 1 | 304 | 5.76e-128 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736630 | G7KFX2 | 61.238 | 307 | 63 | 8 | 6 | 286 | 28 | 304 | 1.93e-99 | 308 |
| Msa0736630 | G7KFX2 | 70.130 | 308 | 69 | 5 | 135 | 423 | 1 | 304 | 2.75e-128 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0736630 | Msa0807520 | 0.896642 | 3.033756e-76 | -8.615850e-47 |
| Msa0736630 | Msa1024350 | 0.801566 | 8.477899e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736630 | MtrunA17_Chr8g0344841 | 43.182 | 88 | 27 | 1 | 135 | 222 | 1 | 65 | 1.96e-13 | 68.6 |
| Msa0736630 | MtrunA17_Chr5g0434321 | 39.785 | 93 | 33 | 1 | 135 | 227 | 1 | 70 | 3.59e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 105 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTAGTAAACTTAGAAAA+TGG | 0.282103 | 5_1:+53206871 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.331713 | 5_1:+53207205 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.331713 | 5_1:+53207343 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.331713 | 5_1:+53207481 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.331713 | 5_1:+53211711 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.335846 | 5_1:+53206929 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.335846 | 5_1:+53207067 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.335846 | 5_1:+53211435 | None:intergenic |
| GATGGTGGATGTGGTCTAAA+TGG | 0.335846 | 5_1:+53211573 | None:intergenic |
| GAGGTGCAGGTTCTGATTGT+TGG | 0.392601 | 5_1:-53206964 | Msa0736630:CDS |
| GAGGTGCAGGTTCTGATTGT+TGG | 0.405446 | 5_1:-53207240 | Msa0736630:CDS |
| GAGGTGCAGGTTCTGATTGT+TGG | 0.405446 | 5_1:-53211470 | Msa0736630:CDS |
| GTGATGCAAGTTCTGATTGT+TGG | 0.405834 | 5_1:-53207516 | Msa0736630:CDS |
| GTGATGCAAGTTCTGATTGT+TGG | 0.405834 | 5_1:-53211746 | Msa0736630:CDS |
| GAGGTTGCTACAAAGCAATT+AGG | 0.420538 | 5_1:-53206899 | Msa0736630:CDS |
| GTGGTGCAAGTTCTGATTGT+TGG | 0.443619 | 5_1:-53207102 | Msa0736630:CDS |
| GTGGTGCAAGTTCTGATTGT+TGG | 0.443619 | 5_1:-53207378 | Msa0736630:CDS |
| GTGGTGCAAGTTCTGATTGT+TGG | 0.443619 | 5_1:-53211608 | Msa0736630:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_1:-53207034 | Msa0736630:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_1:-53207172 | Msa0736630:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_1:-53207310 | Msa0736630:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_1:-53207448 | Msa0736630:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_1:-53211540 | Msa0736630:CDS |
| GAGGTTACTACAAATCAAAA+TGG | 0.454039 | 5_1:-53211678 | Msa0736630:intron |
| ATTGCTTATCAAAGGCCTCT+TGG | 0.461443 | 5_1:-53209679 | Msa0736630:CDS |
| CATGGTTGAAGCTAGGCACT+TGG | 0.463364 | 5_1:-53209634 | Msa0736630:CDS |
| AGGTGCAGGTTCTGATTGTT+GGG | 0.464523 | 5_1:-53206963 | Msa0736630:CDS |
| AGGTGCAGGTTCTGATTGTT+GGG | 0.464523 | 5_1:-53207239 | Msa0736630:CDS |
| AGGTGCAGGTTCTGATTGTT+GGG | 0.464523 | 5_1:-53211469 | Msa0736630:CDS |
| GCTAAAGACGGTCGAGGTGC+AGG | 0.474501 | 5_1:-53206977 | Msa0736630:CDS |
| TGATGCAAGTTCTGATTGTT+GGG | 0.475911 | 5_1:-53207515 | Msa0736630:CDS |
| TGATGCAAGTTCTGATTGTT+GGG | 0.475911 | 5_1:-53211745 | Msa0736630:CDS |
| TGGTGCAAGTTCTGATTGTT+GGG | 0.485043 | 5_1:-53207101 | Msa0736630:CDS |
| TGGTGCAAGTTCTGATTGTT+GGG | 0.485043 | 5_1:-53211607 | Msa0736630:CDS |
| TGGTGCAAGTTCTGATTGTT+GGG | 0.488694 | 5_1:-53207377 | Msa0736630:CDS |
| TCTCTTTCATGGTTGAAGCT+AGG | 0.501093 | 5_1:-53209641 | Msa0736630:CDS |
| AAACTAGCATTGCTTATCAA+AGG | 0.516293 | 5_1:-53209687 | Msa0736630:intron |
| GCTAAAGACAGTCGAGGTGC+AGG | 0.518191 | 5_1:-53207253 | Msa0736630:CDS |
| GCTAAAGACAGTCGAGGTGC+AGG | 0.518191 | 5_1:-53211483 | Msa0736630:CDS |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_1:+53206937 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_1:+53207075 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_1:+53211443 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.529202 | 5_1:+53211581 | None:intergenic |
| GCAGCTACTGATGGTGGATG+TGG | 0.531914 | 5_1:+53207196 | None:intergenic |
| GCAGCTACTGATGGTGGATG+TGG | 0.531914 | 5_1:+53207334 | None:intergenic |
| GCAGCTACTGATGGTGGATG+TGG | 0.531914 | 5_1:+53207472 | None:intergenic |
| GCAGCTACTGATGGTGGATG+TGG | 0.531914 | 5_1:+53211702 | None:intergenic |
| GCAGCTACAGATGGTGGATG+TGG | 0.548299 | 5_1:+53207058 | None:intergenic |
| GCAGCTACAGATGGTGGATG+TGG | 0.548299 | 5_1:+53211564 | None:intergenic |
| ATGGTTGAAGCTAGGCACTT+GGG | 0.565142 | 5_1:-53209633 | Msa0736630:intron |
| TCAACTACAGATGGTGGATG+TGG | 0.570815 | 5_1:+53206920 | None:intergenic |
| TCAACTACAGATGGTGGATG+TGG | 0.570815 | 5_1:+53211426 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.578863 | 5_1:+53207213 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.578863 | 5_1:+53207351 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.578863 | 5_1:+53207489 | None:intergenic |
| ATGTGGTCTAAATGGATCAC+GGG | 0.578863 | 5_1:+53211719 | None:intergenic |
| TGAGACAAAGCAAAATGATG+TGG | 0.601928 | 5_1:-53209305 | Msa0736630:CDS |
| GTAACCTCGGCAGCTACTGA+TGG | 0.603149 | 5_1:+53207187 | None:intergenic |
| GTAACCTCGGCAGCTACTGA+TGG | 0.603149 | 5_1:+53207325 | None:intergenic |
| GTAACCTCGGCAGCTACTGA+TGG | 0.603149 | 5_1:+53207463 | None:intergenic |
| GTAACCTCGGCAGCTACTGA+TGG | 0.603149 | 5_1:+53211693 | None:intergenic |
| ACATCCACCATCTGTAGTTG+AGG | 0.603772 | 5_1:-53206918 | Msa0736630:CDS |
| ACATCCACCATCTGTAGTTG+AGG | 0.603772 | 5_1:-53211424 | Msa0736630:intron |
| ACCTCGGCAGCTACTGATGG+TGG | 0.604253 | 5_1:+53207190 | None:intergenic |
| ACCTCGGCAGCTACTGATGG+TGG | 0.604253 | 5_1:+53207328 | None:intergenic |
| ACCTCGGCAGCTACTGATGG+TGG | 0.604253 | 5_1:+53207466 | None:intergenic |
| ACCTCGGCAGCTACTGATGG+TGG | 0.604253 | 5_1:+53211696 | None:intergenic |
| ACCTCGGCAGCTACAGATGG+TGG | 0.606425 | 5_1:+53207052 | None:intergenic |
| ACCTCGGCAGCTACAGATGG+TGG | 0.606425 | 5_1:+53211558 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.607416 | 5_1:+53207212 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.607416 | 5_1:+53207350 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.607416 | 5_1:+53207488 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.607416 | 5_1:+53211718 | None:intergenic |
| GTAGCAACCTCAACTACAGA+TGG | 0.607993 | 5_1:+53206911 | None:intergenic |
| GTAGCAACCTCAACTACAGA+TGG | 0.607993 | 5_1:+53211417 | None:intergenic |
| GCAACCTCAACTACAGATGG+TGG | 0.611050 | 5_1:+53206914 | None:intergenic |
| GCAACCTCAACTACAGATGG+TGG | 0.611050 | 5_1:+53211420 | None:intergenic |
| TCCACCATCTGTAGCTGCCG+AGG | 0.621472 | 5_1:-53207053 | Msa0736630:CDS |
| TCCACCATCTGTAGCTGCCG+AGG | 0.621472 | 5_1:-53211559 | Msa0736630:CDS |
| GTAACCTCGGCAGCTACAGA+TGG | 0.623701 | 5_1:+53207049 | None:intergenic |
| GTAACCTCGGCAGCTACAGA+TGG | 0.623701 | 5_1:+53211555 | None:intergenic |
| TTAAAACAATCATGACCAAG+AGG | 0.627721 | 5_1:+53209664 | None:intergenic |
| TGAGACACAACAAAATGATG+TGG | 0.628198 | 5_1:-53207581 | Msa0736630:CDS |
| TGAGACACAACAAAATGATG+TGG | 0.628198 | 5_1:-53211811 | Msa0736630:CDS |
| ACAAGTGCTAAAGACGGTCG+AGG | 0.629807 | 5_1:-53206983 | Msa0736630:CDS |
| TCCACCATCAGTAGCTGCCG+AGG | 0.634586 | 5_1:-53207191 | Msa0736630:CDS |
| TCCACCATCAGTAGCTGCCG+AGG | 0.634586 | 5_1:-53207329 | Msa0736630:CDS |
| TCCACCATCAGTAGCTGCCG+AGG | 0.634586 | 5_1:-53207467 | Msa0736630:CDS |
| TCCACCATCAGTAGCTGCCG+AGG | 0.634586 | 5_1:-53211697 | Msa0736630:CDS |
| GTTGCTACAAAGCAATTAGG+AGG | 0.635126 | 5_1:-53206896 | Msa0736630:CDS |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_1:+53206936 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_1:+53207074 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_1:+53211442 | None:intergenic |
| GATGTGGTCTAAATGGATCA+CGG | 0.637725 | 5_1:+53211580 | None:intergenic |
| ACAAGTGCTAAAGACAGTCG+TGG | 0.686347 | 5_1:-53207121 | Msa0736630:CDS |
| ACAAGTGCTAAAGACAGTCG+TGG | 0.686347 | 5_1:-53207397 | Msa0736630:CDS |
| ACAAGTGCTAAAGACAGTCG+TGG | 0.686347 | 5_1:-53211627 | Msa0736630:CDS |
| ACAAGTGCTAAAGACAGTCG+AGG | 0.693274 | 5_1:-53207259 | Msa0736630:CDS |
| ACAAGTGCTAAAGACAGTCG+AGG | 0.693274 | 5_1:-53211489 | Msa0736630:CDS |
| AAAACGAATGGTAAAGACGG+TGG | 0.718541 | 5_1:-53207538 | Msa0736630:CDS |
| AAAACGAATGGTAAAGACGG+TGG | 0.718541 | 5_1:-53211768 | Msa0736630:CDS |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_1:+53206938 | None:intergenic |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_1:+53207076 | None:intergenic |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_1:+53211444 | None:intergenic |
| TGTGGTCTAAATGGATCACG+GGG | 0.752036 | 5_1:+53211582 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTATTTTATATTTAA+TGG | + | chr5_1:53207466-53207485 | None:intergenic | 0.0% |
| !!! | ATAATATTTTTTTTAATATA+TGG | + | chr5_1:53209645-53209664 | None:intergenic | 0.0% |
| !! | TAATATTTATTTAATAAAAA+AGG | + | chr5_1:53210258-53210277 | None:intergenic | 0.0% |
| !! | AATAAAAATAAAAAGTTTCA+TGG | - | chr5_1:53207476-53207495 | Msa0736630:CDS | 10.0% |
| !! | TAAAAAATTTATAATCATAG+GGG | + | chr5_1:53210118-53210137 | None:intergenic | 10.0% |
| !!! | ATGAAGAAATATATTTTTTT+AGG | - | chr5_1:53210285-53210304 | Msa0736630:intron | 10.0% |
| !!! | TCTAATTGATTATTTTTAAT+TGG | - | chr5_1:53210898-53210917 | Msa0736630:intron | 10.0% |
| !!! | ATTTTATATTTAATGGACAA+TGG | + | chr5_1:53207459-53207478 | None:intergenic | 15.0% |
| !! | ATAATTTATATCTGCATTAT+TGG | - | chr5_1:53207771-53207790 | Msa0736630:intron | 15.0% |
| !!! | TTTATTCCATTATCAATTTT+AGG | - | chr5_1:53208640-53208659 | Msa0736630:intron | 15.0% |
| !! | CCATCTATAATATTATTATT+TGG | + | chr5_1:53208889-53208908 | None:intergenic | 15.0% |
| !! | CCAAATAATAATATTATAGA+TGG | - | chr5_1:53208886-53208905 | Msa0736630:intron | 15.0% |
| !! | TCTAATTTACTTAAGAAAAA+TGG | - | chr5_1:53208999-53209018 | Msa0736630:intron | 15.0% |
| !! | TACATATATTGTATCATTTA+TGG | + | chr5_1:53209259-53209278 | None:intergenic | 15.0% |
| !!! | TTCCTAAATTACTAATTTTA+AGG | - | chr5_1:53209324-53209343 | Msa0736630:intron | 15.0% |
| !! | TTCCTTAAAATTAGTAATTT+AGG | + | chr5_1:53209329-53209348 | None:intergenic | 15.0% |
| !! | TTTAAATTAAAACCTAAAGT+CGG | - | chr5_1:53209670-53209689 | Msa0736630:CDS | 15.0% |
| !!! | GATAGAATGTTTATATTTTT+GGG | - | chr5_1:53209943-53209962 | Msa0736630:intron | 15.0% |
| !!! | AGGAAAATTAAAATTTTACA+TGG | + | chr5_1:53210174-53210193 | None:intergenic | 15.0% |
| !! | AATTAAAGATGTGAAAATTA+GGG | + | chr5_1:53210442-53210461 | None:intergenic | 15.0% |
| !! | AAATTAAAGATGTGAAAATT+AGG | + | chr5_1:53210443-53210462 | None:intergenic | 15.0% |
| !! | ATTGAATAAAATGCAATAAT+AGG | - | chr5_1:53210652-53210671 | Msa0736630:intron | 15.0% |
| !!! | ACTACTTGAATTATTTTTTA+TGG | + | chr5_1:53210856-53210875 | None:intergenic | 15.0% |
| !! | TTCCTAAATTACTAAATTTA+AGG | - | chr5_1:53211053-53211072 | Msa0736630:intron | 15.0% |
| !! | TTCCTTAAATTTAGTAATTT+AGG | + | chr5_1:53211058-53211077 | None:intergenic | 15.0% |
| !!! | TCACGTAAACTTTTTTTTAA+GGG | - | chr5_1:53207668-53207687 | Msa0736630:intron | 20.0% |
| !! | TGATGATTACACTAAAAATA+TGG | - | chr5_1:53207847-53207866 | Msa0736630:intron | 20.0% |
| !! | TGAGAAAGTAGATAAATAAT+AGG | - | chr5_1:53208160-53208179 | Msa0736630:intron | 20.0% |
| !! | AGAAAAATAGTTATGTATCA+AGG | - | chr5_1:53208242-53208261 | Msa0736630:intron | 20.0% |
| !!! | TTAATTCTAGAGTTTATTAC+AGG | + | chr5_1:53208289-53208308 | None:intergenic | 20.0% |
| !! | TCAATTAAAATTGATGTTCT+TGG | + | chr5_1:53208567-53208586 | None:intergenic | 20.0% |
| !! | AATGTTCCTAAAATTGATAA+TGG | + | chr5_1:53208649-53208668 | None:intergenic | 20.0% |
| !! | ATTATTATTTGGTACCAATT+TGG | + | chr5_1:53208878-53208897 | None:intergenic | 20.0% |
| !! | CTATATATAAGAGAATTAGA+TGG | + | chr5_1:53208925-53208944 | None:intergenic | 20.0% |
| !!! | TTCTGATTTTTATATATGAG+TGG | - | chr5_1:53209484-53209503 | Msa0736630:intron | 20.0% |
| !!! | ATTTCAAGCTTTAACTTTTT+TGG | + | chr5_1:53209755-53209774 | None:intergenic | 20.0% |
| !!! | GGATAGAATGTTTATATTTT+TGG | - | chr5_1:53209942-53209961 | Msa0736630:intron | 20.0% |
| !!! | ATGAAGTGGTAATTTTTTTT+GGG | - | chr5_1:53209972-53209991 | Msa0736630:intron | 20.0% |
| !! | CAATATAGATTATTTCGTAA+CGG | - | chr5_1:53210144-53210163 | Msa0736630:intron | 20.0% |
| !!! | TTTTTGTCTTGTCTTAAATT+TGG | + | chr5_1:53210350-53210369 | None:intergenic | 20.0% |
| !! | AAAGTATGAAGATATGTTTA+TGG | + | chr5_1:53210784-53210803 | None:intergenic | 20.0% |
| !!! | TATCTTCATACTTTTTCTAA+TGG | - | chr5_1:53210790-53210809 | Msa0736630:intron | 20.0% |
| !! | TTTATGGTTAAAAAAAAGTG+TGG | + | chr5_1:53210840-53210859 | None:intergenic | 20.0% |
| !! | CAAAATAAACTTCACAAATT+TGG | + | chr5_1:53211026-53211045 | None:intergenic | 20.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | + | chr5_1:53207037-53207056 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | + | chr5_1:53207037-53207056 | None:intergenic | 25.0% |
| ! | CCATTAGTAAACTTAGAAAA+TGG | + | chr5_1:53207340-53207359 | None:intergenic | 25.0% |
| !! | CCATTTTCTAAGTTTACTAA+TGG | - | chr5_1:53207337-53207356 | Msa0736630:CDS | 25.0% |
| ! | ATAATAACAACATGTTTACG+AGG | + | chr5_1:53207508-53207527 | None:intergenic | 25.0% |
| !!! | GTCACGTAAACTTTTTTTTA+AGG | - | chr5_1:53207667-53207686 | Msa0736630:intron | 25.0% |
| ! | AATCATCATGTCAAGAAAAT+GGG | + | chr5_1:53207835-53207854 | None:intergenic | 25.0% |
| ! | TAATCATCATGTCAAGAAAA+TGG | + | chr5_1:53207836-53207855 | None:intergenic | 25.0% |
| ! | TTGTAGCATATAATAGACAT+TGG | + | chr5_1:53208074-53208093 | None:intergenic | 25.0% |
| !!! | ACTCATTTTAAAAGTGTAGA+TGG | - | chr5_1:53208102-53208121 | Msa0736630:intron | 25.0% |
| ! | AACACATAAGAAAATACACT+TGG | - | chr5_1:53208350-53208369 | Msa0736630:intron | 25.0% |
| ! | TACACTTGGCAAAATATAAT+TGG | - | chr5_1:53208364-53208383 | Msa0736630:intron | 25.0% |
| ! | ATATAATTGGTTGAGGTAAA+TGG | - | chr5_1:53208377-53208396 | Msa0736630:intron | 25.0% |
| !!! | CATTTTTTTTCAATAACCCT+TGG | + | chr5_1:53208446-53208465 | None:intergenic | 25.0% |
| ! | TGAATTGATTGTGAAATGAA+AGG | + | chr5_1:53208610-53208629 | None:intergenic | 25.0% |
| !!! | TCAATTTTAGGAACATTACA+AGG | - | chr5_1:53208652-53208671 | Msa0736630:intron | 25.0% |
| ! | GAAGAAAATTCAATTGCTTT+AGG | - | chr5_1:53208674-53208693 | Msa0736630:intron | 25.0% |
| !! | TATTGTTTTCCTCAAATTTC+AGG | + | chr5_1:53208755-53208774 | None:intergenic | 25.0% |
| ! | TCAAGATACAATGATAGTAT+TGG | - | chr5_1:53208800-53208819 | Msa0736630:intron | 25.0% |
| !!! | AGTATTGGTTATGTATGTTT+TGG | - | chr5_1:53208815-53208834 | Msa0736630:intron | 25.0% |
| ! | TATGAAAGATTTGAAAGCTA+GGG | + | chr5_1:53208960-53208979 | None:intergenic | 25.0% |
| ! | ATATGAAAGATTTGAAAGCT+AGG | + | chr5_1:53208961-53208980 | None:intergenic | 25.0% |
| !!! | GATTGTTTTAATCTCTTTCA+TGG | - | chr5_1:53209062-53209081 | Msa0736630:intron | 25.0% |
| ! | ATCTTGACTACAAAAATCAA+AGG | + | chr5_1:53209149-53209168 | None:intergenic | 25.0% |
| !!! | AAATATGAACGCTATTTTTC+AGG | - | chr5_1:53209921-53209940 | Msa0736630:intron | 25.0% |
| !!! | GATGAAGTGGTAATTTTTTT+TGG | - | chr5_1:53209971-53209990 | Msa0736630:intron | 25.0% |
| !! | ATATGTGAGTTTAATTTCAG+CGG | + | chr5_1:53210018-53210037 | None:intergenic | 25.0% |
| ! | TAAACTCACATATATTTGTG+AGG | - | chr5_1:53210025-53210044 | Msa0736630:intron | 25.0% |
| !! | AACTTTTCTTCGTTGAAAAT+GGG | + | chr5_1:53210213-53210232 | None:intergenic | 25.0% |
| ! | TCTTGTCTTAAATTTGGAAA+TGG | + | chr5_1:53210344-53210363 | None:intergenic | 25.0% |
| ! | AAATTGTGTGTTAATCTCAA+TGG | - | chr5_1:53210368-53210387 | Msa0736630:intron | 25.0% |
| !!! | TCTAATTTGCTTCAGAAAAA+TGG | - | chr5_1:53210481-53210500 | Msa0736630:intron | 25.0% |
| ! | TATGAAGATATGTTTATGGA+GGG | + | chr5_1:53210780-53210799 | None:intergenic | 25.0% |
| ! | ATAATCAATTAGAGTGAAAG+TGG | + | chr5_1:53210891-53210910 | None:intergenic | 25.0% |
| ! | TACTAAATTTAAGGAAACTC+TGG | - | chr5_1:53211062-53211081 | Msa0736630:intron | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | + | chr5_1:53207037-53207056 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | + | chr5_1:53207037-53207056 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | + | chr5_1:53207037-53207056 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGTAGTAACCT+CGG | + | chr5_1:53207037-53207056 | None:intergenic | 25.0% |
| AAAGATTGTGCAAAAACGAA+TGG | - | chr5_1:53206934-53206953 | Msa0736630:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | - | chr5_1:53207036-53207055 | Msa0736630:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | - | chr5_1:53207036-53207055 | Msa0736630:CDS | 30.0% | |
| TGATGTTTATGTCAAAACGT+TGG | - | chr5_1:53207553-53207572 | Msa0736630:CDS | 30.0% | |
| ! | CAAAACGTTGGAAGTATATT+TGG | - | chr5_1:53207565-53207584 | Msa0736630:CDS | 30.0% |
| ATATCTGCATTATTGGAACA+TGG | - | chr5_1:53207778-53207797 | Msa0736630:intron | 30.0% | |
| ACATGGATTCTTGACATAAA+AGG | - | chr5_1:53207795-53207814 | Msa0736630:intron | 30.0% | |
| ATCATCATGTCAAGAAAATG+GGG | + | chr5_1:53207834-53207853 | None:intergenic | 30.0% | |
| !! | TCATTTCAGTTTTATCCTTC+TGG | + | chr5_1:53207992-53208011 | None:intergenic | 30.0% |
| GAATGCAAGATATGTAGTAA+GGG | - | chr5_1:53208218-53208237 | Msa0736630:intron | 30.0% | |
| !! | AAATTCTGTTGAGTTGATGA+AGG | - | chr5_1:53208308-53208327 | Msa0736630:intron | 30.0% |
| TGGCAAAATATAATTGGTTG+AGG | - | chr5_1:53208370-53208389 | Msa0736630:intron | 30.0% | |
| CTAGTGATTGTGCATAAATA+GGG | - | chr5_1:53208408-53208427 | Msa0736630:intron | 30.0% | |
| TAGTAATTGCCTGAAATTTG+AGG | - | chr5_1:53208743-53208762 | Msa0736630:intron | 30.0% | |
| !! | TTTTGGTTAGTGAAGAATCA+AGG | - | chr5_1:53208832-53208851 | Msa0736630:intron | 30.0% |
| TAAGAGAATTAGATGGTAAG+TGG | + | chr5_1:53208918-53208937 | None:intergenic | 30.0% | |
| AAACTAGCATTGCTTATCAA+AGG | - | chr5_1:53209027-53209046 | Msa0736630:intron | 30.0% | |
| TTAAAACAATCATGACCAAG+AGG | + | chr5_1:53209053-53209072 | None:intergenic | 30.0% | |
| ! | ATTTTTATATATGAGTGGCC+TGG | - | chr5_1:53209489-53209508 | Msa0736630:intron | 30.0% |
| !! | ATTCTAAAGTAACCGACTTT+AGG | + | chr5_1:53209685-53209704 | None:intergenic | 30.0% |
| AAATACCGAAATTGTAAGGT+CGG | + | chr5_1:53210079-53210098 | None:intergenic | 30.0% | |
| TTGCAAATACCGAAATTGTA+AGG | + | chr5_1:53210083-53210102 | None:intergenic | 30.0% | |
| TGGGTCAAAATTCTAATACA+AGG | + | chr5_1:53210194-53210213 | None:intergenic | 30.0% | |
| ! | GAACTTTTCTTCGTTGAAAA+TGG | + | chr5_1:53210214-53210233 | None:intergenic | 30.0% |
| AACGAAGAAAAGTTCAGATA+AGG | - | chr5_1:53210219-53210238 | Msa0736630:intron | 30.0% | |
| ACGAAGAAAAGTTCAGATAA+GGG | - | chr5_1:53210220-53210239 | Msa0736630:intron | 30.0% | |
| CTATATATAAGAGAGCTAGA+TGG | + | chr5_1:53210407-53210426 | None:intergenic | 30.0% | |
| AAACTATCATTGCTTATCCA+AGG | - | chr5_1:53210509-53210528 | Msa0736630:intron | 30.0% | |
| !!! | GCTGTTTTAATCTCTTTCAT+GGG | - | chr5_1:53210545-53210564 | Msa0736630:intron | 30.0% |
| !!! | CTGTTTTAATCTCTTTCATG+GGG | - | chr5_1:53210546-53210565 | Msa0736630:intron | 30.0% |
| !!! | TGTTTTAATCTCTTTCATGG+GGG | - | chr5_1:53209065-53209084 | Msa0736630:intron | 30.0% |
| AATGGAAATTTATTCCGCTA+TGG | + | chr5_1:53210744-53210763 | None:intergenic | 30.0% | |
| GTATGAAGATATGTTTATGG+AGG | + | chr5_1:53210781-53210800 | None:intergenic | 30.0% | |
| TGTGGATCCTTAATGTAATT+GGG | + | chr5_1:53210822-53210841 | None:intergenic | 30.0% | |
| AAAGATTGTGCAAAAACGAA+TGG | - | chr5_1:53206934-53206953 | Msa0736630:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | - | chr5_1:53207036-53207055 | Msa0736630:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | - | chr5_1:53207036-53207055 | Msa0736630:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | - | chr5_1:53207036-53207055 | Msa0736630:CDS | 30.0% | |
| GAGGTTACTACAAATCAAAA+TGG | - | chr5_1:53207036-53207055 | Msa0736630:CDS | 30.0% | |
| TGAGACACAACAAAATGATG+TGG | - | chr5_1:53206903-53206922 | Msa0736630:CDS | 35.0% | |
| GCAAAAACGAATGGTAAAGA+CGG | - | chr5_1:53206943-53206962 | Msa0736630:CDS | 35.0% | |
| ! | TGATGCAAGTTCTGATTGTT+GGG | - | chr5_1:53206969-53206988 | Msa0736630:CDS | 35.0% |
| CAAGCACGGAATAAAAATTC+TGG | + | chr5_1:53207612-53207631 | None:intergenic | 35.0% | |
| CTTAGAAGACAACAATTGCT+TGG | - | chr5_1:53207745-53207764 | Msa0736630:intron | 35.0% | |
| CGAATGCAAGATATGTAGTA+AGG | - | chr5_1:53208217-53208236 | Msa0736630:intron | 35.0% | |
| GCTAGTGATTGTGCATAAAT+AGG | - | chr5_1:53208407-53208426 | Msa0736630:intron | 35.0% | |
| TAGGGAAAGAATAATCACCA+AGG | - | chr5_1:53208426-53208445 | Msa0736630:intron | 35.0% | |
| AGGGAAAGAATAATCACCAA+GGG | - | chr5_1:53208427-53208446 | Msa0736630:intron | 35.0% | |
| !! | GGATCAATGATTTGTTTCCT+AGG | - | chr5_1:53208695-53208714 | Msa0736630:intron | 35.0% |
| !! | TCAATGATTTGTTTCCTAGG+AGG | - | chr5_1:53208698-53208717 | Msa0736630:intron | 35.0% |
| ! | GTTTCCTAGGAGGTTTTTAA+TGG | - | chr5_1:53208708-53208727 | Msa0736630:intron | 35.0% |
| CTCATTCTTTCATGAGATTG+AGG | + | chr5_1:53209115-53209134 | None:intergenic | 35.0% | |
| TCATTTATGGTCAAGTCTAC+AGG | + | chr5_1:53209246-53209265 | None:intergenic | 35.0% | |
| TGAGACAAAGCAAAATGATG+TGG | - | chr5_1:53209409-53209428 | Msa0736630:intron | 35.0% | |
| TAAGTTCAAACATCAGACTC+AGG | + | chr5_1:53209544-53209563 | None:intergenic | 35.0% | |
| AAACCACTGGACTATAACAA+CGG | - | chr5_1:53209592-53209611 | Msa0736630:intron | 35.0% | |
| !!! | TTTTTGGGTCTTAGATGAAG+TGG | - | chr5_1:53209958-53209977 | Msa0736630:intron | 35.0% |
| !!! | GGCTGTTTTAATCTCTTTCA+TGG | - | chr5_1:53210544-53210563 | Msa0736630:intron | 35.0% |
| ! | CTCATTCTTTCTAGAGATTG+AGG | + | chr5_1:53210597-53210616 | None:intergenic | 35.0% |
| ! | GACAATTTTACCTCCTTACA+AGG | - | chr5_1:53210703-53210722 | Msa0736630:intron | 35.0% |
| ! | AATTCTATAGGAGCCTTGTA+AGG | + | chr5_1:53210719-53210738 | None:intergenic | 35.0% |
| TCCTATAGAATTGACCATAG+CGG | - | chr5_1:53210727-53210746 | Msa0736630:intron | 35.0% | |
| TTATGGAGGGAAATTGAACA+TGG | + | chr5_1:53210767-53210786 | None:intergenic | 35.0% | |
| TGGATCCTTAATGTAATTGG+GGG | + | chr5_1:53210820-53210839 | None:intergenic | 35.0% | |
| GTGGATCCTTAATGTAATTG+GGG | + | chr5_1:53210821-53210840 | None:intergenic | 35.0% | |
| GTGTGGATCCTTAATGTAAT+TGG | + | chr5_1:53210823-53210842 | None:intergenic | 35.0% | |
| TAGAGTGAAAGTGGTGAAAA+TGG | + | chr5_1:53210882-53210901 | None:intergenic | 35.0% | |
| TGAGACACAACAAAATGATG+TGG | - | chr5_1:53206903-53206922 | Msa0736630:CDS | 35.0% | |
| GCAAAAACGAATGGTAAAGA+CGG | - | chr5_1:53206943-53206962 | Msa0736630:CDS | 35.0% | |
| ! | TGATGCAAGTTCTGATTGTT+GGG | - | chr5_1:53206969-53206988 | Msa0736630:CDS | 35.0% |
| GCAAAAACAAGTGCTAAAGA+CGG | - | chr5_1:53207081-53207100 | Msa0736630:CDS | 35.0% | |
| AAAACGAATGGTAAAGACGG+TGG | - | chr5_1:53206946-53206965 | Msa0736630:CDS | 40.0% | |
| ! | GTGATGCAAGTTCTGATTGT+TGG | - | chr5_1:53206968-53206987 | Msa0736630:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| ! | TGGTGCAAGTTCTGATTGTT+GGG | - | chr5_1:53207107-53207126 | Msa0736630:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| GAGGTTGCTACAAAGCAATT+AGG | - | chr5_1:53207309-53207328 | Msa0736630:CDS | 40.0% | |
| GTTGCTACAAAGCAATTAGG+AGG | - | chr5_1:53207312-53207331 | Msa0736630:CDS | 40.0% | |
| ACATGATTTGACCCACGTAA+GGG | + | chr5_1:53207419-53207438 | None:intergenic | 40.0% | |
| ! | TAATGGACAATGGCACACAA+AGG | + | chr5_1:53207449-53207468 | None:intergenic | 40.0% |
| ! | AGATATGTCACTTGCAAGCA+CGG | + | chr5_1:53207626-53207645 | None:intergenic | 40.0% |
| TTGCAGTAAACACAACCAGA+AGG | - | chr5_1:53207974-53207993 | Msa0736630:intron | 40.0% | |
| ATGCCATCTTTCTCATTCTC+TGG | - | chr5_1:53208018-53208037 | Msa0736630:intron | 40.0% | |
| CTTCCAGAGAATGAGAAAGA+TGG | + | chr5_1:53208024-53208043 | None:intergenic | 40.0% | |
| CATCTTTCTCATTCTCTGGA+AGG | - | chr5_1:53208022-53208041 | Msa0736630:intron | 40.0% | |
| !! | TTCTGTTGAGTTGATGAAGG+AGG | - | chr5_1:53208311-53208330 | Msa0736630:intron | 40.0% |
| CTCTACTAGAGAGTTCCAAA+GGG | + | chr5_1:53208487-53208506 | None:intergenic | 40.0% | |
| ACTCTACTAGAGAGTTCCAA+AGG | + | chr5_1:53208488-53208507 | None:intergenic | 40.0% | |
| GGAACTCTCTAGTAGAGTAA+TGG | - | chr5_1:53208490-53208509 | Msa0736630:intron | 40.0% | |
| CACTCCATTAAAAACCTCCT+AGG | + | chr5_1:53208715-53208734 | None:intergenic | 40.0% | |
| !! | GTGAAGAATCAAGGCATTGA+AGG | - | chr5_1:53208841-53208860 | Msa0736630:intron | 40.0% |
| ATTGCTTATCAAAGGCCTCT+TGG | - | chr5_1:53209035-53209054 | Msa0736630:intron | 40.0% | |
| TCTCTTTCATGGTTGAAGCT+AGG | - | chr5_1:53209073-53209092 | Msa0736630:intron | 40.0% | |
| !! | TCTACAGGAGCATTGTACAA+AGG | + | chr5_1:53209231-53209250 | None:intergenic | 40.0% |
| TCTATCCTTCTTACGTGTGT+CGG | + | chr5_1:53209519-53209538 | None:intergenic | 40.0% | |
| AGTCAATGCAGTTAAACCAC+TGG | - | chr5_1:53209579-53209598 | Msa0736630:intron | 40.0% | |
| TTTCCGTTGTTATAGTCCAG+TGG | + | chr5_1:53209598-53209617 | None:intergenic | 40.0% | |
| TTAAAACAGCCATGACCATG+AGG | + | chr5_1:53210535-53210554 | None:intergenic | 40.0% | |
| TCCGCTATGGTCAATTCTAT+AGG | + | chr5_1:53210731-53210750 | None:intergenic | 40.0% | |
| GAGGGAAATTGAACATGGAA+TGG | + | chr5_1:53210762-53210781 | None:intergenic | 40.0% | |
| GTCTACCCCCAATTACATTA+AGG | - | chr5_1:53210812-53210831 | Msa0736630:intron | 40.0% | |
| AAAACGAATGGTAAAGACGG+TGG | - | chr5_1:53206946-53206965 | Msa0736630:CDS | 40.0% | |
| ! | GTGATGCAAGTTCTGATTGT+TGG | - | chr5_1:53206968-53206987 | Msa0736630:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| ! | TGGTGCAAGTTCTGATTGTT+GGG | - | chr5_1:53207107-53207126 | Msa0736630:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| ! | TGGTGCAAGTTCTGATTGTT+GGG | - | chr5_1:53207107-53207126 | Msa0736630:CDS | 40.0% |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| ATGTGGTCTAAATGGATCAC+GGG | + | chr5_1:53206998-53207017 | None:intergenic | 40.0% | |
| GATGTGGTCTAAATGGATCA+CGG | + | chr5_1:53206999-53207018 | None:intergenic | 40.0% | |
| GAGGTTGCTACAAAGCAATT+AGG | - | chr5_1:53207309-53207328 | Msa0736630:CDS | 40.0% | |
| GTTGCTACAAAGCAATTAGG+AGG | - | chr5_1:53207312-53207331 | Msa0736630:CDS | 40.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+TGG | - | chr5_1:53207087-53207106 | Msa0736630:CDS | 45.0% | |
| ! | GTGGTGCAAGTTCTGATTGT+TGG | - | chr5_1:53207106-53207125 | Msa0736630:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | + | chr5_1:53206997-53207016 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+AGG | - | chr5_1:53207087-53207106 | Msa0736630:CDS | 45.0% | |
| ! | AGGTGCAGGTTCTGATTGTT+GGG | - | chr5_1:53207245-53207264 | Msa0736630:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | + | chr5_1:53206997-53207016 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| !! | TCAACTACAGATGGTGGATG+TGG | + | chr5_1:53207291-53207310 | None:intergenic | 45.0% |
| ACATCCACCATCTGTAGTTG+AGG | - | chr5_1:53207290-53207309 | Msa0736630:CDS | 45.0% | |
| GTAGCAACCTCAACTACAGA+TGG | + | chr5_1:53207300-53207319 | None:intergenic | 45.0% | |
| ATGATTTGACCCACGTAAGG+GGG | + | chr5_1:53207417-53207436 | None:intergenic | 45.0% | |
| CATGATTTGACCCACGTAAG+GGG | + | chr5_1:53207418-53207437 | None:intergenic | 45.0% | |
| CACATGATTTGACCCACGTA+AGG | + | chr5_1:53207420-53207439 | None:intergenic | 45.0% | |
| GGTTGAGGTAAATGGACATG+TGG | - | chr5_1:53208385-53208404 | Msa0736630:intron | 45.0% | |
| !! | GTACCAATTTGGCCTTGATC+TGG | + | chr5_1:53208867-53208886 | None:intergenic | 45.0% |
| ATGGTTGAAGCTAGGCACTT+GGG | - | chr5_1:53209081-53209100 | Msa0736630:intron | 45.0% | |
| CTATCCTTCTTACGTGTGTC+GGG | + | chr5_1:53209518-53209537 | None:intergenic | 45.0% | |
| GACGTCCGACCTTACAATTT+CGG | - | chr5_1:53210071-53210090 | Msa0736630:intron | 45.0% | |
| TAAGAGAGCTAGATGGTGAG+TGG | + | chr5_1:53210400-53210419 | None:intergenic | 45.0% | |
| ATTGCTTATCCAAGGCCTCA+TGG | - | chr5_1:53210517-53210536 | Msa0736630:intron | 45.0% | |
| ! | TCTATAGGAGCCTTGTAAGG+AGG | + | chr5_1:53210716-53210735 | None:intergenic | 45.0% |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+TGG | - | chr5_1:53207087-53207106 | Msa0736630:CDS | 45.0% | |
| ! | GTGGTGCAAGTTCTGATTGT+TGG | - | chr5_1:53207106-53207125 | Msa0736630:CDS | 45.0% |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+AGG | - | chr5_1:53207087-53207106 | Msa0736630:CDS | 45.0% | |
| ! | AGGTGCAGGTTCTGATTGTT+GGG | - | chr5_1:53207245-53207264 | Msa0736630:CDS | 45.0% |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| ACAAGTGCTAAAGACAGTCG+TGG | - | chr5_1:53207087-53207106 | Msa0736630:CDS | 45.0% | |
| ! | GTGGTGCAAGTTCTGATTGT+TGG | - | chr5_1:53207106-53207125 | Msa0736630:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | + | chr5_1:53206997-53207016 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| ! | AGGTGCAGGTTCTGATTGTT+GGG | - | chr5_1:53207245-53207264 | Msa0736630:CDS | 45.0% |
| TGTGGTCTAAATGGATCACG+GGG | + | chr5_1:53206997-53207016 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGTGGTCTAAA+TGG | + | chr5_1:53207006-53207025 | None:intergenic | 45.0% |
| !! | TCAACTACAGATGGTGGATG+TGG | + | chr5_1:53207291-53207310 | None:intergenic | 45.0% |
| ACATCCACCATCTGTAGTTG+AGG | - | chr5_1:53207290-53207309 | Msa0736630:CDS | 45.0% | |
| GTAGCAACCTCAACTACAGA+TGG | + | chr5_1:53207300-53207319 | None:intergenic | 45.0% | |
| !!! | AATTTTATTTTATTTGAATA+TGG | - | chr5_1:53209370-53209389 | Msa0736630:intron | 5.0% |
| !! | ATAAAAAATTTATAATCATA+GGG | + | chr5_1:53210119-53210138 | None:intergenic | 5.0% |
| !! | AATAAAAAATTTATAATCAT+AGG | + | chr5_1:53210120-53210139 | None:intergenic | 5.0% |
| ! | GAGGTGCAGGTTCTGATTGT+TGG | - | chr5_1:53207244-53207263 | Msa0736630:CDS | 50.0% |
| GCAACCTCAACTACAGATGG+TGG | + | chr5_1:53207297-53207316 | None:intergenic | 50.0% | |
| CACTCATCTTCTCGACAGCA+AGG | + | chr5_1:53208142-53208161 | None:intergenic | 50.0% | |
| AAGTCTCTCCTCTCTCCCTT+TGG | - | chr5_1:53208469-53208488 | Msa0736630:intron | 50.0% | |
| AGAGAGTTCCAAAGGGAGAG+AGG | + | chr5_1:53208480-53208499 | None:intergenic | 50.0% | |
| !! | AGGCATTGAAGGCCAGATCA+AGG | - | chr5_1:53208852-53208871 | Msa0736630:intron | 50.0% |
| AGGCCAGATCAAGGCCAAAT+TGG | - | chr5_1:53208861-53208880 | Msa0736630:intron | 50.0% | |
| CATGGTTGAAGCTAGGCACT+TGG | - | chr5_1:53209080-53209099 | Msa0736630:intron | 50.0% | |
| TGAGGTCTCGTGTTCGAAAC+CGG | - | chr5_1:53210043-53210062 | Msa0736630:intron | 50.0% | |
| AGCTAGATGGTGAGTGGACA+AGG | + | chr5_1:53210394-53210413 | None:intergenic | 50.0% | |
| TATCCAAGGCCTCATGGTCA+TGG | - | chr5_1:53210523-53210542 | Msa0736630:intron | 50.0% | |
| TCTCTTTCATGGGGGAAGCA+AGG | - | chr5_1:53210555-53210574 | Msa0736630:intron | 50.0% | |
| ! | GAGGTGCAGGTTCTGATTGT+TGG | - | chr5_1:53207244-53207263 | Msa0736630:CDS | 50.0% |
| ACAAGTGCTAAAGACGGTCG+AGG | - | chr5_1:53211731-53211750 | Msa0736630:CDS | 50.0% | |
| ! | GAGGTGCAGGTTCTGATTGT+TGG | - | chr5_1:53207244-53207263 | Msa0736630:CDS | 50.0% |
| GCAACCTCAACTACAGATGG+TGG | + | chr5_1:53207297-53207316 | None:intergenic | 50.0% | |
| !! | GCAGCTACTGATGGTGGATG+TGG | + | chr5_1:53207015-53207034 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACTGA+TGG | + | chr5_1:53207024-53207043 | None:intergenic | 55.0% | |
| !! | GCAGCTACAGATGGTGGATG+TGG | + | chr5_1:53207153-53207172 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACAGA+TGG | + | chr5_1:53207162-53207181 | None:intergenic | 55.0% | |
| GCTAAAGACAGTCGAGGTGC+AGG | - | chr5_1:53207231-53207250 | Msa0736630:CDS | 55.0% | |
| ! | AAGGGGGCATGTTGCATGTG+TGG | + | chr5_1:53207401-53207420 | None:intergenic | 55.0% |
| ATGCAACATGCCCCCTTACG+TGG | - | chr5_1:53207404-53207423 | Msa0736630:CDS | 55.0% | |
| TGCAACATGCCCCCTTACGT+GGG | - | chr5_1:53207405-53207424 | Msa0736630:CDS | 55.0% | |
| GTGACCCGACACACGTAAGA+AGG | - | chr5_1:53209511-53209530 | Msa0736630:intron | 55.0% | |
| GAGGTCTCGTGTTCGAAACC+GGG | - | chr5_1:53210044-53210063 | Msa0736630:intron | 55.0% | |
| TAAGGTCGGACGTCATGACC+CGG | + | chr5_1:53210065-53210084 | None:intergenic | 55.0% | |
| ! | ATGGGGGAAGCAAGGCACTT+GGG | - | chr5_1:53210563-53210582 | Msa0736630:intron | 55.0% |
| !! | GCAGCTACTGATGGTGGATG+TGG | + | chr5_1:53207015-53207034 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACTGA+TGG | + | chr5_1:53207024-53207043 | None:intergenic | 55.0% | |
| !! | GCAGCTACTGATGGTGGATG+TGG | + | chr5_1:53207015-53207034 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACTGA+TGG | + | chr5_1:53207024-53207043 | None:intergenic | 55.0% | |
| GCTAAAGACAGTCGAGGTGC+AGG | - | chr5_1:53207231-53207250 | Msa0736630:CDS | 55.0% | |
| !! | GCAGCTACTGATGGTGGATG+TGG | + | chr5_1:53207015-53207034 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACTGA+TGG | + | chr5_1:53207024-53207043 | None:intergenic | 55.0% | |
| !! | GCAGCTACAGATGGTGGATG+TGG | + | chr5_1:53207153-53207172 | None:intergenic | 55.0% |
| GTAACCTCGGCAGCTACAGA+TGG | + | chr5_1:53207162-53207181 | None:intergenic | 55.0% | |
| TCCACCATCAGTAGCTGCCG+AGG | - | chr5_1:53207017-53207036 | Msa0736630:CDS | 60.0% | |
| ACCTCGGCAGCTACTGATGG+TGG | + | chr5_1:53207021-53207040 | None:intergenic | 60.0% | |
| TCCACCATCTGTAGCTGCCG+AGG | - | chr5_1:53207155-53207174 | Msa0736630:CDS | 60.0% | |
| ACCTCGGCAGCTACAGATGG+TGG | + | chr5_1:53207159-53207178 | None:intergenic | 60.0% | |
| CTTACGTGTGTCGGGTCACC+AGG | + | chr5_1:53209510-53209529 | None:intergenic | 60.0% | |
| CAGCCATGACCATGAGGCCT+TGG | + | chr5_1:53210529-53210548 | None:intergenic | 60.0% | |
| ! | CATGGGGGAAGCAAGGCACT+TGG | - | chr5_1:53210562-53210581 | Msa0736630:intron | 60.0% |
| TCCACCATCAGTAGCTGCCG+AGG | - | chr5_1:53207017-53207036 | Msa0736630:CDS | 60.0% | |
| ACCTCGGCAGCTACTGATGG+TGG | + | chr5_1:53207021-53207040 | None:intergenic | 60.0% | |
| TCCACCATCAGTAGCTGCCG+AGG | - | chr5_1:53207017-53207036 | Msa0736630:CDS | 60.0% | |
| ACCTCGGCAGCTACTGATGG+TGG | + | chr5_1:53207021-53207040 | None:intergenic | 60.0% | |
| TCCACCATCAGTAGCTGCCG+AGG | - | chr5_1:53207017-53207036 | Msa0736630:CDS | 60.0% | |
| ACCTCGGCAGCTACTGATGG+TGG | + | chr5_1:53207021-53207040 | None:intergenic | 60.0% | |
| TCCACCATCTGTAGCTGCCG+AGG | - | chr5_1:53207155-53207174 | Msa0736630:CDS | 60.0% | |
| ACCTCGGCAGCTACAGATGG+TGG | + | chr5_1:53207159-53207178 | None:intergenic | 60.0% | |
| GCTAAAGACGGTCGAGGTGC+AGG | - | chr5_1:53211737-53211756 | Msa0736630:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 53206883 | 53211853 | 53206883 | ID=Msa0736630;Name=Msa0736630 |
| chr5_1 | mRNA | 53206883 | 53211853 | 53206883 | ID=Msa0736630-mRNA-1;Parent=Msa0736630;Name=Msa0736630-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|0|0.16|6|0|427 |
| chr5_1 | exon | 53211679 | 53211853 | 53211679 | ID=Msa0736630-mRNA-1:exon:14979;Parent=Msa0736630-mRNA-1 |
| chr5_1 | exon | 53211425 | 53211660 | 53211425 | ID=Msa0736630-mRNA-1:exon:14978;Parent=Msa0736630-mRNA-1 |
| chr5_1 | exon | 53209716 | 53209722 | 53209716 | ID=Msa0736630-mRNA-1:exon:14977;Parent=Msa0736630-mRNA-1 |
| chr5_1 | exon | 53209634 | 53209702 | 53209634 | ID=Msa0736630-mRNA-1:exon:14976;Parent=Msa0736630-mRNA-1 |
| chr5_1 | exon | 53209254 | 53209328 | 53209254 | ID=Msa0736630-mRNA-1:exon:14975;Parent=Msa0736630-mRNA-1 |
| chr5_1 | exon | 53206883 | 53207604 | 53206883 | ID=Msa0736630-mRNA-1:exon:14974;Parent=Msa0736630-mRNA-1 |
| chr5_1 | CDS | 53211679 | 53211853 | 53211679 | ID=Msa0736630-mRNA-1:cds;Parent=Msa0736630-mRNA-1 |
| chr5_1 | CDS | 53211425 | 53211660 | 53211425 | ID=Msa0736630-mRNA-1:cds;Parent=Msa0736630-mRNA-1 |
| chr5_1 | CDS | 53209716 | 53209722 | 53209716 | ID=Msa0736630-mRNA-1:cds;Parent=Msa0736630-mRNA-1 |
| chr5_1 | CDS | 53209634 | 53209702 | 53209634 | ID=Msa0736630-mRNA-1:cds;Parent=Msa0736630-mRNA-1 |
| chr5_1 | CDS | 53209254 | 53209328 | 53209254 | ID=Msa0736630-mRNA-1:cds;Parent=Msa0736630-mRNA-1 |
| chr5_1 | CDS | 53206883 | 53207604 | 53206883 | ID=Msa0736630-mRNA-1:cds;Parent=Msa0736630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
