AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0808660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0808660 MtrunA17_Chr5g0423841 98.166 927 15 2 1 926 1 926 0.0 1883
Msa0808660 MtrunA17_Chr1g0209901 80.333 900 171 3 28 926 30 924 0.0 1538
Msa0808660 MtrunA17_Chr1g0209911 75.932 939 211 5 1 926 1 937 0.0 1491
Msa0808660 MtrunA17_Chr2g0293101 46.344 930 453 15 7 925 17 911 0.0 838
Msa0808660 MtrunA17_Chr2g0293111 45.946 925 453 15 7 919 17 906 0.0 828
Msa0808660 MtrunA17_Chr3g0130691 30.289 657 355 17 188 806 217 808 5.30e-84 290
Msa0808660 MtrunA17_Chr5g0409111 30.628 653 363 20 178 816 144 720 1.29e-75 268
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0808660 AT1G68560.1 75.812 893 205 4 35 926 31 913 0.0 1446
Msa0808660 AT3G45940.1 64.853 919 251 10 11 926 4 853 0.0 1226
Msa0808660 AT5G11720.1 45.248 926 457 15 15 925 11 901 0.0 811
Msa0808660 AT5G63840.1 29.506 749 419 18 148 859 189 865 9.16e-88 300
Msa0808660 AT5G63840.2 29.506 749 419 18 148 859 216 892 1.06e-87 301
Msa0808660 AT3G23640.3 34.526 559 276 17 271 818 238 717 1.01e-84 295
Msa0808660 AT3G23640.2 34.526 559 276 17 271 818 169 648 1.12e-84 293
Msa0808660 AT3G23640.1 34.526 559 276 17 271 818 169 648 1.12e-84 293

Find 253 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGACATCATTGATATTT+TGG 0.095970 5_3:-33486309 None:intergenic
ACGATAGCCTTGACCAATTT+TGG 0.159411 5_3:-33480684 None:intergenic
AATCTTAATGCTGATTTATA+TGG 0.165923 5_3:+33481523 Msa0808660:CDS
CTTTGCCATGACATGGAAAA+TGG 0.172380 5_3:+33486051 Msa0808660:CDS
CCGTTTCCAAGCTTCATTTC+TGG 0.183467 5_3:-33485725 None:intergenic
AATATGCGCTTCGTAGTTTA+AGG 0.189232 5_3:-33485300 None:intergenic
AAGGAACATGGGAGAATTTA+AGG 0.193751 5_3:+33485024 Msa0808660:CDS
ACCCCTGATGGTGCCCTTAT+TGG 0.202977 5_3:+33480725 Msa0808660:CDS
TTTGCATGATCTCTTGAAAA+TGG 0.216652 5_3:-33485176 None:intergenic
TCTTTGACTTATAAGGTTAT+TGG 0.219457 5_3:+33481652 Msa0808660:CDS
CCTAAAGATGCATCTTTATA+TGG 0.220928 5_3:+33481415 Msa0808660:CDS
GACCAGCTGCTATGCCTTAT+TGG 0.221055 5_3:+33481752 Msa0808660:CDS
AATATCAGGGCCATAGATTT+TGG 0.228691 5_3:-33480771 None:intergenic
TTCTTGGCTCAAGTGTGGCC+TGG 0.233420 5_3:+33484522 Msa0808660:CDS
ATGTTGAATTTCGGTATATT+TGG 0.235345 5_3:+33485062 Msa0808660:CDS
AGGAACTTCTTTGACTTATA+AGG 0.239990 5_3:+33481645 Msa0808660:CDS
CACGCTCGTTGTTGCATTCC+CGG 0.244601 5_3:+33485646 Msa0808660:CDS
TCAGTTGTATATAAAGTATA+AGG 0.253421 5_3:-33481487 None:intergenic
TTTGGACATATCGTGTTCTT+TGG 0.265426 5_3:-33484693 None:intergenic
GCTATGCCTTATTGGGCTTT+TGG 0.269822 5_3:+33481760 Msa0808660:CDS
TCCTCAAACGCCACCAAAAT+TGG 0.270399 5_3:+33480671 Msa0808660:CDS
CTGAAGAACTTTGCAATAGA+TGG 0.274848 5_3:+33485132 Msa0808660:CDS
CAACTCATTTGTTGTTGTCT+TGG 0.282188 5_3:-33486134 None:intergenic
TCTTGGCTCAAGTGTGGCCT+GGG 0.284572 5_3:+33484523 Msa0808660:CDS
TTGAAAACAAGTGAACTAAA+TGG 0.291574 5_3:-33481361 None:intergenic
AATGGTGGTGGTTGTTCTCT+TGG 0.296023 5_3:-33481178 None:intergenic
AGATGCATCTTTATATGGTT+TGG 0.300835 5_3:+33481420 Msa0808660:CDS
AACCTAAGAAGGGGAATATC+AGG 0.302044 5_3:-33480785 None:intergenic
TTAGATGGAAAGCCACTAAT+TGG 0.303561 5_3:+33485911 Msa0808660:CDS
ATTGGTAAAGCTCTTGTCTT+GGG 0.307685 5_3:-33485208 None:intergenic
GTATGAAGGTGAACCTTTCT+TGG 0.309484 5_3:+33484506 Msa0808660:CDS
ACCCACCAAGATACCGTCTT+TGG 0.312992 5_3:-33484573 None:intergenic
TTTCCTAAGGTTTGTGGTAA+TGG 0.313549 5_3:-33481196 None:intergenic
CGAGAAATGCTTTAGGTATA+AGG 0.316214 5_3:+33485252 Msa0808660:CDS
TGGATCTCATCCTATGTATA+TGG 0.322901 5_3:+33481543 Msa0808660:CDS
GTGGTTGTTCTCTTGGGATA+AGG 0.326394 5_3:-33481171 None:intergenic
ATTGATTCCATTTCTGTGTT+GGG 0.332469 5_3:+33485851 Msa0808660:CDS
CCTTACAAGATAAACGCTTC+TGG 0.335424 5_3:+33484786 Msa0808660:CDS
GATGCATCTTTATATGGTTT+GGG 0.338606 5_3:+33481421 Msa0808660:CDS
GCCCTGATATTCCCCTTCTT+AGG 0.339169 5_3:+33480783 Msa0808660:CDS
TTTGGACGAGGGTAGTTCTT+TGG 0.339509 5_3:-33484354 None:intergenic
AACAAGGAGGTGTGAAAGTT+TGG 0.339571 5_3:+33485783 Msa0808660:CDS
TTCAAGAAGTTCAGAAGCTT+TGG 0.339947 5_3:-33484372 None:intergenic
ACCAGCTGCTATGCCTTATT+GGG 0.344317 5_3:+33481753 Msa0808660:CDS
CATCCTGGTCCTGTTCCATT+TGG 0.345366 5_3:-33484711 None:intergenic
CCATATAAAGATGCATCTTT+AGG 0.345622 5_3:-33481415 None:intergenic
ATTTCTGTGTTGGGATTAGA+TGG 0.346671 5_3:+33485860 Msa0808660:CDS
CCAGAAGCGTTTATCTTGTA+AGG 0.347793 5_3:-33484786 None:intergenic
GATCAGTATACTACTTTGAT+TGG 0.350998 5_3:+33481727 Msa0808660:CDS
ATATCCACAATGTTGAATTT+CGG 0.352326 5_3:+33485053 Msa0808660:CDS
GTGGACCGCGACAAAATAAA+AGG 0.354551 5_3:-33484954 None:intergenic
GCAACTCACAAGGGTCTTCT+TGG 0.356281 5_3:+33484915 Msa0808660:CDS
AGATAGTAATTTGCATAGAT+TGG 0.361667 5_3:+33480475 None:intergenic
AGGATCGTCCCATCTTGTTT+TGG 0.363147 5_3:-33484763 None:intergenic
TACTTCTGAACATGTGCATT+TGG 0.366445 5_3:+33485955 Msa0808660:CDS
CGGTCCACTTATGTTGGTTC+GGG 0.366968 5_3:+33484969 Msa0808660:CDS
GTCTTTGGATTGAGAAAATC+AGG 0.367465 5_3:-33484558 None:intergenic
GAAGCCTCAAATTTCTGTTC+TGG 0.368564 5_3:+33484657 Msa0808660:CDS
TATGATGCTCATAGTATCTA+TGG 0.368905 5_3:+33484876 Msa0808660:CDS
CCTTTGGTATACACCATAAC+TGG 0.369803 5_3:-33484457 None:intergenic
TTGTTGAAATCTCAAGATAT+TGG 0.372770 5_3:-33481387 None:intergenic
GTGGCTTCACTTGAGTTAGA+TGG 0.373357 5_3:+33485896 Msa0808660:CDS
TGAGTTGAAGGAGACCAATA+AGG 0.373613 5_3:-33480739 None:intergenic
ATCATACCAAAAGCCCAATA+AGG 0.377929 5_3:-33481766 None:intergenic
AACCAGAAAACCAAAATCTA+TGG 0.379933 5_3:+33480761 Msa0808660:CDS
GAATACTCTGAGACTTCAAT+AGG 0.380490 5_3:-33481232 None:intergenic
AACTACGAAGCGCATATTAC+TGG 0.381260 5_3:+33485305 Msa0808660:CDS
ATTGAAGTCTCAGAGTATTC+AGG 0.384713 5_3:+33481235 Msa0808660:CDS
GATATCCCCATCTGCATTGA+TGG 0.387246 5_3:-33484215 None:intergenic
GGGTAGTGTCAGGGTAGATA+TGG 0.389879 5_3:-33480519 None:intergenic
CTGTTATGTGTACTCTTAAA+CGG 0.393847 5_3:-33481114 None:intergenic
GCGGTCCACTTATGTTGGTT+CGG 0.394005 5_3:+33484968 Msa0808660:CDS
GTCATTATTGACCCTGGAAT+TGG 0.397156 5_3:+33484426 Msa0808660:CDS
ATGGTGGTGGTTGTTCTCTT+GGG 0.398455 5_3:-33481177 None:intergenic
ACACTTGACAAGCCAATTAG+TGG 0.400133 5_3:-33485923 None:intergenic
ATCAATCCACCTTGCTGCAT+TGG 0.404465 5_3:-33485596 None:intergenic
TAGTTTAAGGTGTAAAGATA+TGG 0.405653 5_3:-33485287 None:intergenic
AGTTGAAGTTGAGTTGAAAA+GGG 0.409807 5_3:-33481329 None:intergenic
AAGTTGAAGTTGAGTTGAAA+AGG 0.411882 5_3:-33481330 None:intergenic
CAATCTGCGAGAAATGCTTT+AGG 0.413095 5_3:+33485245 Msa0808660:CDS
AAGGGTCTTCTTGGACTTGA+AGG 0.413515 5_3:+33484924 Msa0808660:CDS
AAATTCCGCTCGATGTGATC+TGG 0.413564 5_3:+33484286 Msa0808660:CDS
TCAATCCAAAGACGGTATCT+TGG 0.419549 5_3:+33484568 Msa0808660:CDS
AGGGTAGTTCTTTGGATTCA+AGG 0.420050 5_3:-33484346 None:intergenic
TGGAACTTTCCTAAGGTTTG+TGG 0.421087 5_3:-33481202 None:intergenic
CTCGTTGTTGCATTCCCGGC+TGG 0.421987 5_3:+33485650 Msa0808660:CDS
CAAAGTTCTTCAGTTGGTTG+TGG 0.425327 5_3:-33485122 None:intergenic
CATGAACTCGTACCTGTTGA+CGG 0.426235 5_3:+33484615 Msa0808660:CDS
TCGTACCTGTTGACGGCCTA+TGG 0.426914 5_3:+33484622 Msa0808660:CDS
TAATTTGCATAGATTGGATC+TGG 0.431997 5_3:+33480481 None:intergenic
TGAGTGAGCAGGGTAGTGTC+AGG 0.434739 5_3:-33480529 None:intergenic
CAGATGCAAACAAGCAAAGA+TGG 0.439003 5_3:+33481134 Msa0808660:CDS
ATCTAATCCCAACACAGAAA+TGG 0.439538 5_3:-33485858 None:intergenic
TATATGGATCTGAGAAATAA+TGG 0.439740 5_3:+33481559 Msa0808660:CDS
TTCTTGGACTTGAAGGCAAA+AGG 0.441950 5_3:+33484931 Msa0808660:CDS
TCTCTTGGGATAAGGTTGTA+TGG 0.443474 5_3:-33481163 None:intergenic
TTGACTTATAAGGTTATTGG+TGG 0.444386 5_3:+33481655 Msa0808660:CDS
CTGGAGTTAACACCAATTCC+AGG 0.446779 5_3:-33484438 None:intergenic
TATTGATTCCATTTCTGTGT+TGG 0.446974 5_3:+33485850 Msa0808660:CDS
GCAAGGTGGATTGATCTCTA+AGG 0.447708 5_3:+33485604 Msa0808660:CDS
AGACCAATAAGGGCACCATC+AGG 0.448219 5_3:-33480728 None:intergenic
ACTCCAAGACACCGTTATAG+TGG 0.450821 5_3:-33484854 None:intergenic
TGAAAACAAGTGAACTAAAT+GGG 0.454745 5_3:-33481360 None:intergenic
AGAGTGAGGAGTGAGTGAGC+AGG 0.458017 5_3:-33480540 None:intergenic
ACCATCAGGGGTTTCTTCAA+TGG 0.458833 5_3:-33480714 None:intergenic
CCTTCTTCTATTTGCATCTG+AGG 0.459916 5_3:+33480640 Msa0808660:CDS
TTGCATGATCTCTTGAAAAT+GGG 0.465416 5_3:-33485175 None:intergenic
ACCAGGATGGATATGTTGCT+TGG 0.465580 5_3:+33484725 Msa0808660:CDS
GAGTGAGGAGTGAGTGAGCA+GGG 0.466189 5_3:-33480539 None:intergenic
CATTGTTTCCTCCCGGTAGT+TGG 0.466389 5_3:+33485462 Msa0808660:CDS
CATCGTTGGCTAAACCCCTT+TGG 0.466924 5_3:-33484473 None:intergenic
AGAGCTTTACCAATGGGATT+CGG 0.470710 5_3:+33485217 Msa0808660:CDS
GTTGGTACAGTTTACTCGAT+TGG 0.473073 5_3:+33485480 Msa0808660:CDS
CTGGAACGACGATGATCATA+TGG 0.474710 5_3:+33484305 Msa0808660:CDS
CCTCAGATGCAAATAGAAGA+AGG 0.475416 5_3:-33480640 None:intergenic
ACTCACACCATCACATCAAC+AGG 0.478651 5_3:+33485503 Msa0808660:CDS
TCAATCCATAGGCCGTCAAC+AGG 0.479710 5_3:-33484627 None:intergenic
CGGTATATTTGGTGTTCCAA+TGG 0.480390 5_3:+33485073 Msa0808660:CDS
AAAGTTCTTCAGTTGGTTGT+GGG 0.482195 5_3:-33485121 None:intergenic
TCAGGAAAGTTTACCGCCCC+AGG 0.483976 5_3:-33484540 None:intergenic
ATATTTGGTGTTCCAATGGT+TGG 0.485273 5_3:+33485077 Msa0808660:CDS
ACGATATGTCCAAATGGAAC+AGG 0.485380 5_3:+33484702 Msa0808660:CDS
TTTACCAGAACAGAAATTTG+AGG 0.488269 5_3:-33484661 None:intergenic
TCTCCTTCTGATGCACCAGC+CGG 0.490316 5_3:-33485665 None:intergenic
ATTGGTGTTAACTCCAGTTA+TGG 0.492063 5_3:+33484444 Msa0808660:CDS
CATTGGTAAAGCTCTTGTCT+TGG 0.492147 5_3:-33485209 None:intergenic
AATACTCTGAGACTTCAATA+GGG 0.492896 5_3:-33481231 None:intergenic
GATAAGAAAATAATTATGTT+CGG 0.494745 5_3:-33486385 None:intergenic
TTTCTCAGATCCATATACAT+AGG 0.497998 5_3:-33481553 None:intergenic
CAGTTATGGTGTATACCAAA+GGG 0.499204 5_3:+33484458 Msa0808660:CDS
GGTAAATTTGCTTTAGACAA+AGG 0.501257 5_3:+33485821 Msa0808660:CDS
CATCAGAAGGAGATGCTAAA+GGG 0.503388 5_3:+33485675 Msa0808660:CDS
AAGAAAAGTGGTCTTGCAAT+TGG 0.503440 5_3:-33485332 None:intergenic
ACTTAGCATAGAACCTAAGA+AGG 0.505923 5_3:-33480796 None:intergenic
ATACTTGATGAAAACATCGT+TGG 0.508108 5_3:-33484487 None:intergenic
AAGACAAGAGCTTTACCAAT+GGG 0.512360 5_3:+33485211 Msa0808660:CDS
TGCAATAGATGGATTGAAGT+TGG 0.513700 5_3:+33485143 Msa0808660:CDS
GGCTCAAGTGTGGCCTGGGG+CGG 0.516405 5_3:+33484527 Msa0808660:CDS
GAACTTCCAGAAATGAAGCT+TGG 0.516701 5_3:+33485719 Msa0808660:CDS
CAGTTGTATATAAAGTATAA+GGG 0.516738 5_3:-33481486 None:intergenic
CTCCTTCTGATGCACCAGCC+GGG 0.517533 5_3:-33485664 None:intergenic
ACCAATAAGGGCACCATCAG+GGG 0.519110 5_3:-33480726 None:intergenic
AATGGAGTGAAGTGAGAGTG+AGG 0.520116 5_3:-33480554 None:intergenic
ATGGTTGGTTCCGACATATG+TGG 0.520697 5_3:+33485092 Msa0808660:CDS
CCAGAAATGAAGCTTGGAAA+CGG 0.521555 5_3:+33485725 Msa0808660:CDS
CAGGATTCCATCAATGCAGA+TGG 0.521721 5_3:+33484208 Msa0808660:intron
TTGTCGCGGTCCACTTATGT+TGG 0.522950 5_3:+33484963 Msa0808660:CDS
GTTATAGTGGGTTGCACTAG+TGG 0.522996 5_3:-33484841 None:intergenic
TTTGCCATGACATGGAAAAT+GGG 0.523263 5_3:+33486052 Msa0808660:CDS
AACCTTTCTTGGCTCAAGTG+TGG 0.523753 5_3:+33484517 Msa0808660:CDS
ATCCAAAGACGGTATCTTGG+TGG 0.524403 5_3:+33484571 Msa0808660:CDS
GCCCAATAAGGCATAGCAGC+TGG 0.525990 5_3:-33481754 None:intergenic
TTTGCCCGAACCAACATAAG+TGG 0.526839 5_3:-33484973 None:intergenic
TCAGTCAAAAGAAAATCAAA+TGG 0.527251 5_3:+33481301 Msa0808660:CDS
CATTGGACTGGTGACAATCA+AGG 0.527676 5_3:+33485005 Msa0808660:CDS
AAGGTTTGTGGTAATGGTGG+TGG 0.529787 5_3:-33481190 None:intergenic
CCACCATTACCACAAACCTT+AGG 0.531410 5_3:+33481193 Msa0808660:CDS
GAGTTGAAGGAGACCAATAA+GGG 0.534621 5_3:-33480738 None:intergenic
GCATCAGAAGGAGATGCTAA+AGG 0.534788 5_3:+33485674 Msa0808660:CDS
TGTCCAAATGGAACAGGACC+AGG 0.534970 5_3:+33484708 Msa0808660:CDS
TACATTGTCATTATTGACCC+TGG 0.538902 5_3:+33484420 Msa0808660:CDS
CTATTGCAAAGTTCTTCAGT+TGG 0.540147 5_3:-33485128 None:intergenic
AAGAACACGATATGTCCAAA+TGG 0.540149 5_3:+33484696 Msa0808660:CDS
GTTGTTGAATAGTAATGGAA+TGG 0.541632 5_3:+33481609 Msa0808660:CDS
TCCAAGCAACATATCCATCC+TGG 0.543677 5_3:-33484726 None:intergenic
GGCCACACTTGAGCCAAGAA+AGG 0.545802 5_3:-33484519 None:intergenic
AGATGGAAGTGTTGGAGCAG+TGG 0.546659 5_3:+33485877 Msa0808660:CDS
GTGAAAGCATTGTTTCCTCC+CGG 0.547809 5_3:+33485455 Msa0808660:CDS
ATCAGTTGTTGAAGATGTTG+TGG 0.549536 5_3:+33484245 Msa0808660:CDS
AAGACCCTTGTGAGTTGCGA+CGG 0.550455 5_3:-33484910 None:intergenic
GATGGGAAAGTGAAGAAAAG+TGG 0.551252 5_3:-33485344 None:intergenic
GAGTAAACTGTACCAACTAC+CGG 0.552239 5_3:-33485474 None:intergenic
TGGGTAAAATCCACATATGT+CGG 0.552361 5_3:-33485102 None:intergenic
TGGACCAACTCCTTTGAATG+TGG 0.552956 5_3:+33481702 Msa0808660:CDS
CTCAGATGCAAATAGAAGAA+GGG 0.553427 5_3:-33480639 None:intergenic
AGAACATCACCAAAACAAGA+TGG 0.554704 5_3:+33484754 Msa0808660:CDS
AATGCAACAACGAGCGTGAA+GGG 0.554870 5_3:-33485641 None:intergenic
CTGGTGACAATCAAGGAACA+TGG 0.556321 5_3:+33485012 Msa0808660:CDS
ACTAGTGCAACCCACTATAA+CGG 0.556439 5_3:+33484843 Msa0808660:CDS
ATATCTCCGGTGCTCGAACA+AGG 0.557999 5_3:+33485422 Msa0808660:CDS
GACCAATAAGGGCACCATCA+GGG 0.558124 5_3:-33480727 None:intergenic
CCTAAGGTTTGTGGTAATGG+TGG 0.558277 5_3:-33481193 None:intergenic
TGCACATTCACCACATGAAG+AGG 0.558516 5_3:-33485551 None:intergenic
TTCCCGGCTGGTGCATCAGA+AGG 0.558535 5_3:+33485662 Msa0808660:CDS
CATATGTCGGAACCAACCAT+TGG 0.559566 5_3:-33485089 None:intergenic
AAGCAGTCTCATGATATCTC+CGG 0.562483 5_3:+33485409 Msa0808660:CDS
GCAATCCGTCGCAACTCACA+AGG 0.563418 5_3:+33484905 Msa0808660:CDS
TACTGATCAACCACATTCAA+AGG 0.563536 5_3:-33481712 None:intergenic
AGATGCAAACAAGCAAAGAT+GGG 0.564971 5_3:+33481135 Msa0808660:CDS
TCTGGAATACAAGCTCCAAT+CGG 0.565528 5_3:+33484804 Msa0808660:CDS
TCAACCACATTCAAAGGAGT+TGG 0.566294 5_3:-33481706 None:intergenic
TTGGGATTAGATGGAAGTGT+TGG 0.571364 5_3:+33485869 Msa0808660:CDS
AAATATGCTGCACATTGGAC+TGG 0.572533 5_3:+33484993 Msa0808660:CDS
AACAACGAGCGTGAAGGGTG+TGG 0.575238 5_3:-33485636 None:intergenic
AAGTTCAGAAGCTTTGGACG+AGG 0.578339 5_3:-33484366 None:intergenic
AGTTCAGAAGCTTTGGACGA+GGG 0.578588 5_3:-33484365 None:intergenic
CTTCGTTCATGTCAATCCAT+AGG 0.580153 5_3:-33484638 None:intergenic
CCAGTTATGGTGTATACCAA+AGG 0.580821 5_3:+33484457 Msa0808660:CDS
AGGATTCCATCAATGCAGAT+GGG 0.583052 5_3:+33484209 Msa0808660:intron
AACCCACTATAACGGTGTCT+TGG 0.585133 5_3:+33484851 Msa0808660:CDS
TTGGTAAAGCTCTTGTCTTG+GGG 0.587218 5_3:-33485207 None:intergenic
CTTGGCTCAAGTGTGGCCTG+GGG 0.588583 5_3:+33484524 Msa0808660:CDS
GAATGCAACAACGAGCGTGA+AGG 0.592132 5_3:-33485642 None:intergenic
CTTAGCATAGAACCTAAGAA+GGG 0.592875 5_3:-33480795 None:intergenic
TATAAAGTATAAGGGTCACT+TGG 0.594372 5_3:-33481478 None:intergenic
TTGAACAAGATACACAGCAT+TGG 0.600111 5_3:+33484390 Msa0808660:CDS
CATTTGGAAGGTGAAGGAAA+TGG 0.600808 5_3:+33485971 Msa0808660:CDS
TCTGAACATGTGCATTTGGA+AGG 0.603305 5_3:+33485959 Msa0808660:CDS
GAACATCACCAAAACAAGAT+GGG 0.603407 5_3:+33484755 Msa0808660:CDS
TCCAAAGACGGTATCTTGGT+GGG 0.603568 5_3:+33484572 Msa0808660:CDS
ACTGTGATGGTAACTTTGAG+AGG 0.604296 5_3:+33486004 Msa0808660:CDS
TGGAGTTAACACCAATTCCA+GGG 0.605234 5_3:-33484437 None:intergenic
CGGGCAAATATGCTGCACAT+TGG 0.606847 5_3:+33484988 Msa0808660:CDS
ACCTAAGAAGGGGAATATCA+GGG 0.608020 5_3:-33480784 None:intergenic
ATTGAGCTACCGAATCCCAT+TGG 0.608425 5_3:-33485226 None:intergenic
TGTTGTGGATAGTTACAAGA+AGG 0.610027 5_3:+33484260 Msa0808660:CDS
AACGCCACCAAAATTGGTCA+AGG 0.610047 5_3:+33480677 Msa0808660:CDS
TATACCGAAATTCAACATTG+TGG 0.611148 5_3:-33485057 None:intergenic
CTATATGCTAGTGTCAAACA+AGG 0.612842 5_3:+33485767 Msa0808660:CDS
CTCCAAGACACCGTTATAGT+GGG 0.622378 5_3:-33484853 None:intergenic
CAAGACAAGAGCTTTACCAA+TGG 0.624512 5_3:+33485210 Msa0808660:CDS
TATGAATATATATCTCAAAG+TGG 0.625857 5_3:+33486336 Msa0808660:three_prime_UTR
GGATATAATTTAATCCCATG+TGG 0.629764 5_3:-33481457 None:intergenic
GAAGCGTTTATCTTGTAAGG+AGG 0.630030 5_3:-33484783 None:intergenic
AGTTTGGTCAGAAGTTCAAG+AGG 0.635859 5_3:+33485799 Msa0808660:CDS
GAGTGAGCAGGGTAGTGTCA+GGG 0.636107 5_3:-33480528 None:intergenic
AGTTCCGCCTGTTGATGTGA+TGG 0.636334 5_3:-33485510 None:intergenic
ATGGATCTGAGAAATAATGG+TGG 0.637533 5_3:+33481562 Msa0808660:CDS
AGTAAACTGTACCAACTACC+GGG 0.640442 5_3:-33485473 None:intergenic
ACTTGATGCACCTCTTCATG+TGG 0.643407 5_3:+33485541 Msa0808660:CDS
AGAGGGTTGAGCATTCCTGT+TGG 0.649091 5_3:+33486022 Msa0808660:CDS
GTTTGGTCAGAAGTTCAAGA+GGG 0.655783 5_3:+33485800 Msa0808660:CDS
ACAATTCTTCCAATGCAGCA+AGG 0.659787 5_3:+33485587 Msa0808660:CDS
CAATCCGTCGCAACTCACAA+GGG 0.662202 5_3:+33484906 Msa0808660:CDS
TGGTGACAATCAAGGAACAT+GGG 0.663893 5_3:+33485013 Msa0808660:CDS
TTAGCATAGAACCTAAGAAG+GGG 0.663933 5_3:-33480794 None:intergenic
ATTCTTCCAATGCAGCAAGG+TGG 0.666214 5_3:+33485590 Msa0808660:CDS
AACGACGATGATCATATGGA+CGG 0.669594 5_3:+33484309 Msa0808660:CDS
CAAATGGAACAGGACCAGGA+TGG 0.669712 5_3:+33484712 Msa0808660:CDS
GGAGAGAATACACAACCACA+TGG 0.676026 5_3:+33481442 Msa0808660:CDS
CATAGAAATGCTAAACTGTG+AGG 0.677071 5_3:-33480596 None:intergenic
AGTTATGGTGTATACCAAAG+GGG 0.677346 5_3:+33484459 Msa0808660:CDS
CTGTGATGGTAACTTTGAGA+GGG 0.681039 5_3:+33486005 Msa0808660:CDS
TGGTGAAAGTAAGACTGTGA+TGG 0.681480 5_3:+33485991 Msa0808660:CDS
TCGTTCCAGATCACATCGAG+CGG 0.689132 5_3:-33484291 None:intergenic
GTACGAGTTCATGAAAGCGA+CGG 0.689303 5_3:-33484605 None:intergenic
CACACCATCACATCAACAGG+CGG 0.689960 5_3:+33485506 Msa0808660:CDS
GGATTCCATCAATGCAGATG+GGG 0.692287 5_3:+33484210 Msa0808660:intron
TCCATTGAAGAAACCCCTGA+TGG 0.700898 5_3:+33480713 Msa0808660:CDS
GAGAGAATACACAACCACAT+GGG 0.709781 5_3:+33481443 Msa0808660:CDS
CATGTGCATTTGGAAGGTGA+AGG 0.717327 5_3:+33485965 Msa0808660:CDS
TATGCTAGTGTCAAACAAGG+AGG 0.726500 5_3:+33485770 Msa0808660:CDS
AAACTGTACCAACTACCGGG+AGG 0.768178 5_3:-33485470 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTTATATTAAATTAA+AGG - chr5_3:33482355-33482374 None:intergenic 0.0%
!! TTAATTGTTAGATTAAAAAA+AGG + chr5_3:33481900-33481919 Msa0808660:intron 10.0%
!! TTTATAATTGAAAATATTGA+TGG + chr5_3:33483617-33483636 Msa0808660:intron 10.0%
!!! TTTACTTAATTTATCTATTT+TGG + chr5_3:33483735-33483754 Msa0808660:intron 10.0%
!! AATCTAACAATTAACAAAAA+GGG - chr5_3:33481894-33481913 None:intergenic 15.0%
!! TAATCTAACAATTAACAAAA+AGG - chr5_3:33481895-33481914 None:intergenic 15.0%
!! AATACTTAAATGATAAACTT+TGG + chr5_3:33481969-33481988 Msa0808660:intron 15.0%
!! TATATTAATGAAAAAGAACA+GGG - chr5_3:33482193-33482212 None:intergenic 15.0%
!! ATATATTAATGAAAAAGAAC+AGG - chr5_3:33482194-33482213 None:intergenic 15.0%
!! TCCAAAAATAATTAATCATT+TGG + chr5_3:33482398-33482417 Msa0808660:intron 15.0%
!!! ACCAAATGATTAATTATTTT+TGG - chr5_3:33482402-33482421 None:intergenic 15.0%
!! AAAAACAAAAATATCAATCA+TGG + chr5_3:33482465-33482484 Msa0808660:intron 15.0%
!! AAATGTTAAAAATGATATCA+CGG - chr5_3:33482537-33482556 None:intergenic 15.0%
!!! ATATCATTTTTAACATTTTG+TGG + chr5_3:33482539-33482558 Msa0808660:intron 15.0%
!! ACTCTATTAATATTTCAAAA+TGG - chr5_3:33482818-33482837 None:intergenic 15.0%
!!! TTTTGAAATATTAATAGAGT+CGG + chr5_3:33483033-33483052 Msa0808660:intron 15.0%
!! GTATTGTTAATAAGAATATA+AGG - chr5_3:33483690-33483709 None:intergenic 15.0%
!! ATTTGTCAATTATAAGAAAA+AGG + chr5_3:33484071-33484090 Msa0808660:intron 15.0%
!!! AAGAACTAAATGTGTTTTTT+AGG - chr5_3:33480826-33480845 None:intergenic 20.0%
!!! TTTTCACATTATTATCAGTA+TGG - chr5_3:33480935-33480954 None:intergenic 20.0%
!! ATAGGTACAATTAACAATAT+TGG - chr5_3:33481066-33481085 None:intergenic 20.0%
!! CAGTTGTATATAAAGTATAA+GGG - chr5_3:33481489-33481508 None:intergenic 20.0%
!! TCAGTTGTATATAAAGTATA+AGG - chr5_3:33481490-33481509 None:intergenic 20.0%
!!! AATCTTAATGCTGATTTATA+TGG + chr5_3:33481523-33481542 Msa0808660:CDS 20.0%
!! ATTTACCATCATATATTACT+TGG - chr5_3:33482299-33482318 None:intergenic 20.0%
!!! ACAGATTTAGAATAAAAAAG+AGG - chr5_3:33482332-33482351 None:intergenic 20.0%
!! ATAATTAATCATTTGGTAGA+TGG + chr5_3:33482405-33482424 Msa0808660:intron 20.0%
!! TAATTAATCATTTGGTAGAT+GGG + chr5_3:33482406-33482425 Msa0808660:intron 20.0%
!!! AAGTTTGTTCTGTATTTTTT+AGG + chr5_3:33482497-33482516 Msa0808660:intron 20.0%
!!! TATTTTTTAGGATTCATGTA+AGG + chr5_3:33482509-33482528 Msa0808660:intron 20.0%
!! TGATTTACTCATTAATATAC+AGG - chr5_3:33482752-33482771 None:intergenic 20.0%
!! TAATGAGTAAATCATCAATT+TGG + chr5_3:33482758-33482777 Msa0808660:intron 20.0%
!!! AGAAATTTTTGACAAATTCA+TGG + chr5_3:33482912-33482931 Msa0808660:intron 20.0%
!!! TTTGAAATATTAATAGAGTC+GGG + chr5_3:33483034-33483053 Msa0808660:intron 20.0%
!!! GATTCTTCTTTTATAAAGTT+TGG + chr5_3:33483097-33483116 Msa0808660:intron 20.0%
!!! TAGGTAATTGAATACTTTTT+TGG + chr5_3:33483209-33483228 Msa0808660:intron 20.0%
!! ATAAAGTTACAGAAAATCTA+AGG - chr5_3:33484028-33484047 None:intergenic 20.0%
!!! TGTTTCTTTTCAATTTTAAC+AGG + chr5_3:33486111-33486130 Msa0808660:three_prime_UTR 20.0%
!!! AAATATGAATGTTGTTTTCT+AGG + chr5_3:33486171-33486190 Msa0808660:three_prime_UTR 20.0%
!!! TGCTTTTATTATGTGAAAAT+TGG - chr5_3:33486259-33486278 None:intergenic 20.0%
!!! TAATGACATCATTGATATTT+TGG - chr5_3:33486312-33486331 None:intergenic 20.0%
!! TATGAATATATATCTCAAAG+TGG + chr5_3:33486336-33486355 Msa0808660:three_prime_UTR 20.0%
!!! TTCTTTTTTTGATATGTGTG+TGG + chr5_3:33480841-33480860 Msa0808660:intron 25.0%
! TAATGTAATCTAACATGTCA+TGG + chr5_3:33480967-33480986 Msa0808660:intron 25.0%
!!! TTTTGACTGAGAAACTAAAT+GGG - chr5_3:33481291-33481310 None:intergenic 25.0%
! TCAGTCAAAAGAAAATCAAA+TGG + chr5_3:33481301-33481320 Msa0808660:CDS 25.0%
! TGAAAACAAGTGAACTAAAT+GGG - chr5_3:33481363-33481382 None:intergenic 25.0%
! TTGAAAACAAGTGAACTAAA+TGG - chr5_3:33481364-33481383 None:intergenic 25.0%
! TTGTTGAAATCTCAAGATAT+TGG - chr5_3:33481390-33481409 None:intergenic 25.0%
! TATATGGATCTGAGAAATAA+TGG + chr5_3:33481559-33481578 Msa0808660:CDS 25.0%
!!! GTTTTGTTGTTGAATAGTAA+TGG + chr5_3:33481604-33481623 Msa0808660:CDS 25.0%
!! TCTTTGACTTATAAGGTTAT+TGG + chr5_3:33481652-33481671 Msa0808660:CDS 25.0%
!!! TTTGATTTTTACTTCTTCTC+TGG + chr5_3:33481682-33481701 Msa0808660:CDS 25.0%
!! AGAAACACTTTTGCAAAAAT+TGG + chr5_3:33481928-33481947 Msa0808660:intron 25.0%
!! GAAACACTTTTGCAAAAATT+GGG + chr5_3:33481929-33481948 Msa0808660:intron 25.0%
!! AAACACTTTTGCAAAAATTG+GGG + chr5_3:33481930-33481949 Msa0808660:intron 25.0%
!!! TATTTTTGGATGTAGTTGAA+AGG - chr5_3:33482388-33482407 None:intergenic 25.0%
! ATACAATCATAGATCTGAAA+AGG - chr5_3:33482633-33482652 None:intergenic 25.0%
! AAAAAATATCTCTGAGTCAT+TGG - chr5_3:33482725-33482744 None:intergenic 25.0%
!!! AATGACTCAGAGATATTTTT+TGG + chr5_3:33482724-33482743 Msa0808660:intron 25.0%
!! TATGTTTCTGTCAATTGAAT+AGG + chr5_3:33482883-33482902 Msa0808660:intron 25.0%
!! ATGTTTCTGTCAATTGAATA+GGG + chr5_3:33482884-33482903 Msa0808660:intron 25.0%
!! AAGAGTATGTTAATGTATGA+TGG + chr5_3:33483065-33483084 Msa0808660:intron 25.0%
! AGAGTATGTTAATGTATGAT+GGG + chr5_3:33483066-33483085 Msa0808660:intron 25.0%
! ATCATTTCACACACAAAATA+TGG + chr5_3:33483247-33483266 Msa0808660:intron 25.0%
!! AACCTTTTTGCTAAAGTTTT+GGG + chr5_3:33483301-33483320 Msa0808660:intron 25.0%
! ATAGTTGCAACATTTCAAAA+AGG - chr5_3:33483339-33483358 None:intergenic 25.0%
! AACTATAAAGCAATACATGT+GGG + chr5_3:33483353-33483372 Msa0808660:intron 25.0%
! AGTAATAATGAAAAACGTGT+AGG - chr5_3:33483403-33483422 None:intergenic 25.0%
!! AATTTTACCCTTAAACACAA+TGG - chr5_3:33483584-33483603 None:intergenic 25.0%
! CTAACTGATATTCTTACTAT+TGG + chr5_3:33484181-33484200 Msa0808660:intron 25.0%
! TATTCTTACTATTGGTATAC+AGG + chr5_3:33484189-33484208 Msa0808660:intron 25.0%
! ATATCCACAATGTTGAATTT+CGG + chr5_3:33485053-33485072 Msa0808660:CDS 25.0%
! ATGTTGAATTTCGGTATATT+TGG + chr5_3:33485062-33485081 Msa0808660:CDS 25.0%
!! TAGTTTAAGGTGTAAAGATA+TGG - chr5_3:33485290-33485309 None:intergenic 25.0%
TAAACCATAGCTCACAAAAA+TGG - chr5_3:33480575-33480594 None:intergenic 30.0%
AACCAGAAAACCAAAATCTA+TGG + chr5_3:33480761-33480780 Msa0808660:CDS 30.0%
!!! TGTACCTATTTGTTTTTTGC+AGG + chr5_3:33481077-33481096 Msa0808660:intron 30.0%
CTGTTATGTGTACTCTTAAA+CGG - chr5_3:33481117-33481136 None:intergenic 30.0%
!!! GTTTTTTTGGAACTTTCCTA+AGG - chr5_3:33481212-33481231 None:intergenic 30.0%
!!! AGACTTCAATAGGGTTTTTT+TGG - chr5_3:33481225-33481244 None:intergenic 30.0%
!! AATACTCTGAGACTTCAATA+GGG - chr5_3:33481234-33481253 None:intergenic 30.0%
!! CTTTTGACTGAGAAACTAAA+TGG - chr5_3:33481292-33481311 None:intergenic 30.0%
!! AGTTGAAGTTGAGTTGAAAA+GGG - chr5_3:33481332-33481351 None:intergenic 30.0%
!! AAGTTGAAGTTGAGTTGAAA+AGG - chr5_3:33481333-33481352 None:intergenic 30.0%
CCATATAAAGATGCATCTTT+AGG - chr5_3:33481418-33481437 None:intergenic 30.0%
CCTAAAGATGCATCTTTATA+TGG + chr5_3:33481415-33481434 Msa0808660:CDS 30.0%
AGATGCATCTTTATATGGTT+TGG + chr5_3:33481420-33481439 Msa0808660:CDS 30.0%
GATGCATCTTTATATGGTTT+GGG + chr5_3:33481421-33481440 Msa0808660:CDS 30.0%
GGATATAATTTAATCCCATG+TGG - chr5_3:33481460-33481479 None:intergenic 30.0%
TATAAAGTATAAGGGTCACT+TGG - chr5_3:33481481-33481500 None:intergenic 30.0%
TTTCTCAGATCCATATACAT+AGG - chr5_3:33481556-33481575 None:intergenic 30.0%
! GTTGTTGAATAGTAATGGAA+TGG + chr5_3:33481609-33481628 Msa0808660:CDS 30.0%
! GGAATGGATGTGTTTTATAA+AGG + chr5_3:33481625-33481644 Msa0808660:CDS 30.0%
! AGGAACTTCTTTGACTTATA+AGG + chr5_3:33481645-33481664 Msa0808660:CDS 30.0%
TTGACTTATAAGGTTATTGG+TGG + chr5_3:33481655-33481674 Msa0808660:CDS 30.0%
GATCAGTATACTACTTTGAT+TGG + chr5_3:33481727-33481746 Msa0808660:CDS 30.0%
TATATTACTTGGTCTGAACT+CGG - chr5_3:33482288-33482307 None:intergenic 30.0%
TCAGACCAAGTAATATATGA+TGG + chr5_3:33482291-33482310 Msa0808660:intron 30.0%
!!! TTAATACGAGAGCATTTTCA+TGG + chr5_3:33482677-33482696 Msa0808660:intron 30.0%
TTCAATTGACAGAAACATAG+AGG - chr5_3:33482882-33482901 None:intergenic 30.0%
GAGTATGTTAATGTATGATG+GGG + chr5_3:33483067-33483086 Msa0808660:intron 30.0%
AGTATGTTAATGTATGATGG+GGG + chr5_3:33483068-33483087 Msa0808660:intron 30.0%
! GATACTATCAAGATCTTTTC+TGG + chr5_3:33483164-33483183 Msa0808660:intron 30.0%
TGAAATGATATCATTCCATG+TGG - chr5_3:33483236-33483255 None:intergenic 30.0%
! CAACCTTTTTGCTAAAGTTT+TGG + chr5_3:33483300-33483319 Msa0808660:intron 30.0%
CAACTATAAAGCAATACATG+TGG + chr5_3:33483352-33483371 Msa0808660:intron 30.0%
! TCTTTCTATTTTGCTACCTA+AGG + chr5_3:33483422-33483441 Msa0808660:intron 30.0%
TAAATATAACCTCTCTCCTT+AGG - chr5_3:33483441-33483460 None:intergenic 30.0%
TTAAAAATCTTCCACATGGT+TGG - chr5_3:33483495-33483514 None:intergenic 30.0%
GACATTAAAAATCTTCCACA+TGG - chr5_3:33483499-33483518 None:intergenic 30.0%
TAAAGATAAGCTTCCTTTGT+TGG + chr5_3:33483522-33483541 Msa0808660:intron 30.0%
ATCAATCAATCACTAAGATG+TGG + chr5_3:33483557-33483576 Msa0808660:intron 30.0%
! ACAAATACACTGATTACAGT+TGG - chr5_3:33483763-33483782 None:intergenic 30.0%
CAGGATTTGCCTAATTTAAT+GGG + chr5_3:33483867-33483886 Msa0808660:intron 30.0%
AGGATTTGCCTAATTTAATG+GGG + chr5_3:33483868-33483887 Msa0808660:intron 30.0%
CATACAATCAAGTAAACATG+AGG + chr5_3:33483902-33483921 Msa0808660:intron 30.0%
ATCATGCTTCAAATGCAAAA+AGG + chr5_3:33484117-33484136 Msa0808660:intron 30.0%
TCATGCTTCAAATGCAAAAA+GGG + chr5_3:33484118-33484137 Msa0808660:intron 30.0%
! AGTTCTTTTATCAAAGCTTC+AGG - chr5_3:33484146-33484165 None:intergenic 30.0%
ATACTTGATGAAAACATCGT+TGG - chr5_3:33484490-33484509 None:intergenic 30.0%
! GATGTTTTCATCAAGTATGA+AGG + chr5_3:33484492-33484511 Msa0808660:CDS 30.0%
! TGATTTTCTCAATCCAAAGA+CGG + chr5_3:33484560-33484579 Msa0808660:CDS 30.0%
TTTACCAGAACAGAAATTTG+AGG - chr5_3:33484664-33484683 None:intergenic 30.0%
TATGATGCTCATAGTATCTA+TGG + chr5_3:33484876-33484895 Msa0808660:CDS 30.0%
TATACCGAAATTCAACATTG+TGG - chr5_3:33485060-33485079 None:intergenic 30.0%
TTGCATGATCTCTTGAAAAT+GGG - chr5_3:33485178-33485197 None:intergenic 30.0%
TTTGCATGATCTCTTGAAAA+TGG - chr5_3:33485179-33485198 None:intergenic 30.0%
! CGTAACATTTTGTGTAAGAT+GGG - chr5_3:33485364-33485383 None:intergenic 30.0%
! TCGTAACATTTTGTGTAAGA+TGG - chr5_3:33485365-33485384 None:intergenic 30.0%
! GGTAAATTTGCTTTAGACAA+AGG + chr5_3:33485821-33485840 Msa0808660:CDS 30.0%
!! TATTGATTCCATTTCTGTGT+TGG + chr5_3:33485850-33485869 Msa0808660:CDS 30.0%
! ATTGATTCCATTTCTGTGTT+GGG + chr5_3:33485851-33485870 Msa0808660:CDS 30.0%
!!! TGTTTTCTAGGTTTTTAGCT+AGG + chr5_3:33486183-33486202 Msa0808660:three_prime_UTR 30.0%
CATAGAAATGCTAAACTGTG+AGG - chr5_3:33480599-33480618 None:intergenic 35.0%
CTCAGATGCAAATAGAAGAA+GGG - chr5_3:33480642-33480661 None:intergenic 35.0%
! AATATCAGGGCCATAGATTT+TGG - chr5_3:33480774-33480793 None:intergenic 35.0%
TTAGCATAGAACCTAAGAAG+GGG - chr5_3:33480797-33480816 None:intergenic 35.0%
CTTAGCATAGAACCTAAGAA+GGG - chr5_3:33480798-33480817 None:intergenic 35.0%
ACTTAGCATAGAACCTAAGA+AGG - chr5_3:33480799-33480818 None:intergenic 35.0%
ATGTCATGGTCGTATCATAT+CGG + chr5_3:33480981-33481000 Msa0808660:intron 35.0%
!! TCAGAAGTGTTAGTACTACA+TGG + chr5_3:33481029-33481048 Msa0808660:intron 35.0%
CATGCCTGCAAAAAACAAAT+AGG - chr5_3:33481084-33481103 None:intergenic 35.0%
AGATGCAAACAAGCAAAGAT+GGG + chr5_3:33481135-33481154 Msa0808660:CDS 35.0%
TTTCCTAAGGTTTGTGGTAA+TGG - chr5_3:33481199-33481218 None:intergenic 35.0%
!! GAATACTCTGAGACTTCAAT+AGG - chr5_3:33481235-33481254 None:intergenic 35.0%
! ATTGAAGTCTCAGAGTATTC+AGG + chr5_3:33481235-33481254 Msa0808660:CDS 35.0%
TGGATCTCATCCTATGTATA+TGG + chr5_3:33481543-33481562 Msa0808660:CDS 35.0%
ATGGATCTGAGAAATAATGG+TGG + chr5_3:33481562-33481581 Msa0808660:CDS 35.0%
TACTGATCAACCACATTCAA+AGG - chr5_3:33481715-33481734 None:intergenic 35.0%
ATCATACCAAAAGCCCAATA+AGG - chr5_3:33481769-33481788 None:intergenic 35.0%
GCTGCATTTGTGATTAACTA+TGG + chr5_3:33481991-33482010 Msa0808660:intron 35.0%
CCAATATCAATGTGTGATGA+TGG - chr5_3:33482224-33482243 None:intergenic 35.0%
CCATCATCACACATTGATAT+TGG + chr5_3:33482221-33482240 Msa0808660:intron 35.0%
ATATTACTTGGTCTGAACTC+GGG - chr5_3:33482287-33482306 None:intergenic 35.0%
! TTTTTATTATCAGTGCCAGC+GGG - chr5_3:33482450-33482469 None:intergenic 35.0%
! GTTTTTATTATCAGTGCCAG+CGG - chr5_3:33482451-33482470 None:intergenic 35.0%
TCTGAAAAGGTTTGTCTCTT+TGG - chr5_3:33482620-33482639 None:intergenic 35.0%
CTGTCACTGTTTGTTTGATT+TGG + chr5_3:33483142-33483161 Msa0808660:intron 35.0%
TAACACTCAACAACAAAAGC+TGG - chr5_3:33483191-33483210 None:intergenic 35.0%
!!! AGCTTTTGTTGTTGAGTGTT+AGG + chr5_3:33483190-33483209 Msa0808660:intron 35.0%
!!! GAATACTTTTTTGGTCCACA+TGG + chr5_3:33483218-33483237 Msa0808660:intron 35.0%
GACCCAAAACTTTAGCAAAA+AGG - chr5_3:33483306-33483325 None:intergenic 35.0%
TCAGTTAATGTCACCAACAA+AGG - chr5_3:33483538-33483557 None:intergenic 35.0%
ATGTGGTCCATTGTGTTTAA+GGG + chr5_3:33483574-33483593 Msa0808660:intron 35.0%
GCAGGATTTGCCTAATTTAA+TGG + chr5_3:33483866-33483885 Msa0808660:intron 35.0%
GGATTTGCCTAATTTAATGG+GGG + chr5_3:33483869-33483888 Msa0808660:intron 35.0%
TCTTTCTCCCCCATTAAATT+AGG - chr5_3:33483879-33483898 None:intergenic 35.0%
AATTTAATGGGGGAGAAAGA+TGG + chr5_3:33483879-33483898 Msa0808660:intron 35.0%
GCATGATGCATAAGAATCTA+AGG - chr5_3:33484104-33484123 None:intergenic 35.0%
ATCAGTTGTTGAAGATGTTG+TGG + chr5_3:33484245-33484264 Msa0808660:CDS 35.0%
TGTTGTGGATAGTTACAAGA+AGG + chr5_3:33484260-33484279 Msa0808660:CDS 35.0%
TTCAAGAAGTTCAGAAGCTT+TGG - chr5_3:33484375-33484394 None:intergenic 35.0%
TTGAACAAGATACACAGCAT+TGG + chr5_3:33484390-33484409 Msa0808660:CDS 35.0%
TACATTGTCATTATTGACCC+TGG + chr5_3:33484420-33484439 Msa0808660:CDS 35.0%
!! ATTGGTGTTAACTCCAGTTA+TGG + chr5_3:33484444-33484463 Msa0808660:CDS 35.0%
CAGTTATGGTGTATACCAAA+GGG + chr5_3:33484458-33484477 Msa0808660:CDS 35.0%
AGTTATGGTGTATACCAAAG+GGG + chr5_3:33484459-33484478 Msa0808660:CDS 35.0%
GTCTTTGGATTGAGAAAATC+AGG - chr5_3:33484561-33484580 None:intergenic 35.0%
TTTGGACATATCGTGTTCTT+TGG - chr5_3:33484696-33484715 None:intergenic 35.0%
AAGAACACGATATGTCCAAA+TGG + chr5_3:33484696-33484715 Msa0808660:CDS 35.0%
AGAACATCACCAAAACAAGA+TGG + chr5_3:33484754-33484773 Msa0808660:CDS 35.0%
GAACATCACCAAAACAAGAT+GGG + chr5_3:33484755-33484774 Msa0808660:CDS 35.0%
!! GCTATTGTTTTGTATCCGAT+TGG - chr5_3:33484822-33484841 None:intergenic 35.0%
!!! AAAGGCCTTTTATTTTGTCG+CGG + chr5_3:33484949-33484968 Msa0808660:CDS 35.0%
AAGGAACATGGGAGAATTTA+AGG + chr5_3:33485024-33485043 Msa0808660:CDS 35.0%
!! ATATTTGGTGTTCCAATGGT+TGG + chr5_3:33485077-33485096 Msa0808660:CDS 35.0%
TGGGTAAAATCCACATATGT+CGG - chr5_3:33485105-33485124 None:intergenic 35.0%
AAAGTTCTTCAGTTGGTTGT+GGG - chr5_3:33485124-33485143 None:intergenic 35.0%
CTATTGCAAAGTTCTTCAGT+TGG - chr5_3:33485131-33485150 None:intergenic 35.0%
CTGAAGAACTTTGCAATAGA+TGG + chr5_3:33485132-33485151 Msa0808660:CDS 35.0%
!! TGCAATAGATGGATTGAAGT+TGG + chr5_3:33485143-33485162 Msa0808660:CDS 35.0%
ATTGGTAAAGCTCTTGTCTT+GGG - chr5_3:33485211-33485230 None:intergenic 35.0%
AAGACAAGAGCTTTACCAAT+GGG + chr5_3:33485211-33485230 Msa0808660:CDS 35.0%
! CGAGAAATGCTTTAGGTATA+AGG + chr5_3:33485252-33485271 Msa0808660:CDS 35.0%
AATATGCGCTTCGTAGTTTA+AGG - chr5_3:33485303-33485322 None:intergenic 35.0%
! AAGAAAAGTGGTCTTGCAAT+TGG - chr5_3:33485335-33485354 None:intergenic 35.0%
CTATATGCTAGTGTCAAACA+AGG + chr5_3:33485767-33485786 Msa0808660:CDS 35.0%
ATCTAATCCCAACACAGAAA+TGG - chr5_3:33485861-33485880 None:intergenic 35.0%
ATTTCTGTGTTGGGATTAGA+TGG + chr5_3:33485860-33485879 Msa0808660:CDS 35.0%
TTAGATGGAAAGCCACTAAT+TGG + chr5_3:33485911-33485930 Msa0808660:CDS 35.0%
TACTTCTGAACATGTGCATT+TGG + chr5_3:33485955-33485974 Msa0808660:CDS 35.0%
! ATGGCAAAGTTTTTACCAAC+AGG - chr5_3:33486040-33486059 None:intergenic 35.0%
GTAAAAACTTTGCCATGACA+TGG + chr5_3:33486044-33486063 Msa0808660:CDS 35.0%
TTTGCCATGACATGGAAAAT+GGG + chr5_3:33486052-33486071 Msa0808660:CDS 35.0%
!! CAACTCATTTGTTGTTGTCT+TGG - chr5_3:33486137-33486156 None:intergenic 35.0%
!! CACTCCATTTTTGTGAGCTA+TGG + chr5_3:33480568-33480587 Msa0808660:exon 40.0%
CCTCAGATGCAAATAGAAGA+AGG - chr5_3:33480643-33480662 None:intergenic 40.0%
CCTTCTTCTATTTGCATCTG+AGG + chr5_3:33480640-33480659 Msa0808660:CDS 40.0%
!! ATAGCCTTGACCAATTTTGG+TGG - chr5_3:33480684-33480703 None:intergenic 40.0%
!! ACGATAGCCTTGACCAATTT+TGG - chr5_3:33480687-33480706 None:intergenic 40.0%
GAGTTGAAGGAGACCAATAA+GGG - chr5_3:33480741-33480760 None:intergenic 40.0%
! TGAGTTGAAGGAGACCAATA+AGG - chr5_3:33480742-33480761 None:intergenic 40.0%
!!! TGGTTTTCTGGTTGAGTTGA+AGG - chr5_3:33480754-33480773 None:intergenic 40.0%
!!! GGCCATAGATTTTGGTTTTC+TGG - chr5_3:33480766-33480785 None:intergenic 40.0%
ACCTAAGAAGGGGAATATCA+GGG - chr5_3:33480787-33480806 None:intergenic 40.0%
AACCTAAGAAGGGGAATATC+AGG - chr5_3:33480788-33480807 None:intergenic 40.0%
GTTGTATCCGACATTAGTGT+CGG - chr5_3:33480902-33480921 None:intergenic 40.0%
CAGATGCAAACAAGCAAAGA+TGG + chr5_3:33481134-33481153 Msa0808660:CDS 40.0%
TCTCTTGGGATAAGGTTGTA+TGG - chr5_3:33481166-33481185 None:intergenic 40.0%
TGGAACTTTCCTAAGGTTTG+TGG - chr5_3:33481205-33481224 None:intergenic 40.0%
GAGAGAATACACAACCACAT+GGG + chr5_3:33481443-33481462 Msa0808660:CDS 40.0%
TCAACCACATTCAAAGGAGT+TGG - chr5_3:33481709-33481728 None:intergenic 40.0%
ATGTAAGAACCAGTTGTTGC+AGG + chr5_3:33482246-33482265 Msa0808660:intron 40.0%
GGATGTAGTTGAAAGGAAAG+TGG - chr5_3:33482381-33482400 None:intergenic 40.0%
! TTTTATTATCAGTGCCAGCG+GGG - chr5_3:33482449-33482468 None:intergenic 40.0%
! ATTTTGCTACCTAAGGAGAG+AGG + chr5_3:33483429-33483448 Msa0808660:intron 40.0%
! GTTTTATAGCACCAACCATG+TGG + chr5_3:33483481-33483500 Msa0808660:intron 40.0%
GATGTGGTCCATTGTGTTTA+AGG + chr5_3:33483573-33483592 Msa0808660:intron 40.0%
AGGATTCCATCAATGCAGAT+GGG + chr5_3:33484209-33484228 Msa0808660:intron 40.0%
AACGACGATGATCATATGGA+CGG + chr5_3:33484309-33484328 Msa0808660:CDS 40.0%
AGGGTAGTTCTTTGGATTCA+AGG - chr5_3:33484349-33484368 None:intergenic 40.0%
GTCATTATTGACCCTGGAAT+TGG + chr5_3:33484426-33484445 Msa0808660:CDS 40.0%
TGGAGTTAACACCAATTCCA+GGG - chr5_3:33484440-33484459 None:intergenic 40.0%
CCTTTGGTATACACCATAAC+TGG - chr5_3:33484460-33484479 None:intergenic 40.0%
CCAGTTATGGTGTATACCAA+AGG + chr5_3:33484457-33484476 Msa0808660:CDS 40.0%
GTATGAAGGTGAACCTTTCT+TGG + chr5_3:33484506-33484525 Msa0808660:CDS 40.0%
TCAATCCAAAGACGGTATCT+TGG + chr5_3:33484568-33484587 Msa0808660:CDS 40.0%
CTTCGTTCATGTCAATCCAT+AGG - chr5_3:33484641-33484660 None:intergenic 40.0%
GAAGCCTCAAATTTCTGTTC+TGG + chr5_3:33484657-33484676 Msa0808660:CDS 40.0%
ACGATATGTCCAAATGGAAC+AGG + chr5_3:33484702-33484721 Msa0808660:CDS 40.0%
! GAAGCGTTTATCTTGTAAGG+AGG - chr5_3:33484786-33484805 None:intergenic 40.0%
!! CCAGAAGCGTTTATCTTGTA+AGG - chr5_3:33484789-33484808 None:intergenic 40.0%
CCTTACAAGATAAACGCTTC+TGG + chr5_3:33484786-33484805 Msa0808660:CDS 40.0%
! TCTGGAATACAAGCTCCAAT+CGG + chr5_3:33484804-33484823 Msa0808660:CDS 40.0%
ACTAGTGCAACCCACTATAA+CGG + chr5_3:33484843-33484862 Msa0808660:CDS 40.0%
TTCTTGGACTTGAAGGCAAA+AGG + chr5_3:33484931-33484950 Msa0808660:CDS 40.0%
AAATATGCTGCACATTGGAC+TGG + chr5_3:33484993-33485012 Msa0808660:CDS 40.0%
TGGTGACAATCAAGGAACAT+GGG + chr5_3:33485013-33485032 Msa0808660:CDS 40.0%
!! CGGTATATTTGGTGTTCCAA+TGG + chr5_3:33485073-33485092 Msa0808660:CDS 40.0%
CAAAGTTCTTCAGTTGGTTG+TGG - chr5_3:33485125-33485144 None:intergenic 40.0%
TTGGTAAAGCTCTTGTCTTG+GGG - chr5_3:33485210-33485229 None:intergenic 40.0%
CATTGGTAAAGCTCTTGTCT+TGG - chr5_3:33485212-33485231 None:intergenic 40.0%
CAAGACAAGAGCTTTACCAA+TGG + chr5_3:33485210-33485229 Msa0808660:CDS 40.0%
AGAGCTTTACCAATGGGATT+CGG + chr5_3:33485217-33485236 Msa0808660:CDS 40.0%
CAATCTGCGAGAAATGCTTT+AGG + chr5_3:33485245-33485264 Msa0808660:CDS 40.0%
AACTACGAAGCGCATATTAC+TGG + chr5_3:33485305-33485324 Msa0808660:CDS 40.0%
GATGGGAAAGTGAAGAAAAG+TGG - chr5_3:33485347-33485366 None:intergenic 40.0%
! GTCAGCACTCAGTTTTTACT+CGG + chr5_3:33485386-33485405 Msa0808660:CDS 40.0%
AAGCAGTCTCATGATATCTC+CGG + chr5_3:33485409-33485428 Msa0808660:CDS 40.0%
ACAATTCTTCCAATGCAGCA+AGG + chr5_3:33485587-33485606 Msa0808660:CDS 40.0%
CATCAGAAGGAGATGCTAAA+GGG + chr5_3:33485675-33485694 Msa0808660:CDS 40.0%
GAACTTCCAGAAATGAAGCT+TGG + chr5_3:33485719-33485738 Msa0808660:CDS 40.0%
CCAGAAATGAAGCTTGGAAA+CGG + chr5_3:33485725-33485744 Msa0808660:CDS 40.0%
TATGCTAGTGTCAAACAAGG+AGG + chr5_3:33485770-33485789 Msa0808660:CDS 40.0%
! AACAAGGAGGTGTGAAAGTT+TGG + chr5_3:33485783-33485802 Msa0808660:CDS 40.0%
AGTTTGGTCAGAAGTTCAAG+AGG + chr5_3:33485799-33485818 Msa0808660:CDS 40.0%
GTTTGGTCAGAAGTTCAAGA+GGG + chr5_3:33485800-33485819 Msa0808660:CDS 40.0%
! TTGGGATTAGATGGAAGTGT+TGG + chr5_3:33485869-33485888 Msa0808660:CDS 40.0%
ACACTTGACAAGCCAATTAG+TGG - chr5_3:33485926-33485945 None:intergenic 40.0%
TCTGAACATGTGCATTTGGA+AGG + chr5_3:33485959-33485978 Msa0808660:CDS 40.0%
CATTTGGAAGGTGAAGGAAA+TGG + chr5_3:33485971-33485990 Msa0808660:CDS 40.0%
TGGTGAAAGTAAGACTGTGA+TGG + chr5_3:33485991-33486010 Msa0808660:CDS 40.0%
ACTGTGATGGTAACTTTGAG+AGG + chr5_3:33486004-33486023 Msa0808660:CDS 40.0%
! CTGTGATGGTAACTTTGAGA+GGG + chr5_3:33486005-33486024 Msa0808660:CDS 40.0%
CTTTGCCATGACATGGAAAA+TGG + chr5_3:33486051-33486070 Msa0808660:CDS 40.0%
! TCATCCCATTTTCCATGTCA+TGG - chr5_3:33486059-33486078 None:intergenic 40.0%
AATGGAGTGAAGTGAGAGTG+AGG - chr5_3:33480557-33480576 None:intergenic 45.0%
TCCTCAAACGCCACCAAAAT+TGG + chr5_3:33480671-33480690 Msa0808660:CDS 45.0%
!!! ACCAATTTTGGTGGCGTTTG+AGG - chr5_3:33480675-33480694 None:intergenic 45.0%
AACGCCACCAAAATTGGTCA+AGG + chr5_3:33480677-33480696 Msa0808660:CDS 45.0%
TCCATTGAAGAAACCCCTGA+TGG + chr5_3:33480713-33480732 Msa0808660:CDS 45.0%
ACCATCAGGGGTTTCTTCAA+TGG - chr5_3:33480717-33480736 None:intergenic 45.0%
! TGATGCACCGACACTAATGT+CGG + chr5_3:33480892-33480911 Msa0808660:intron 45.0%
TGGTCGTATCATATCGGTGT+TGG + chr5_3:33480987-33481006 Msa0808660:intron 45.0%
GTGGTTGTTCTCTTGGGATA+AGG - chr5_3:33481174-33481193 None:intergenic 45.0%
!! ATGGTGGTGGTTGTTCTCTT+GGG - chr5_3:33481180-33481199 None:intergenic 45.0%
!! AATGGTGGTGGTTGTTCTCT+TGG - chr5_3:33481181-33481200 None:intergenic 45.0%
!! AAGGTTTGTGGTAATGGTGG+TGG - chr5_3:33481193-33481212 None:intergenic 45.0%
!! CCTAAGGTTTGTGGTAATGG+TGG - chr5_3:33481196-33481215 None:intergenic 45.0%
CCACCATTACCACAAACCTT+AGG + chr5_3:33481193-33481212 Msa0808660:CDS 45.0%
GGAGAGAATACACAACCACA+TGG + chr5_3:33481442-33481461 Msa0808660:CDS 45.0%
TGGACCAACTCCTTTGAATG+TGG + chr5_3:33481702-33481721 Msa0808660:CDS 45.0%
! ACCAGCTGCTATGCCTTATT+GGG + chr5_3:33481753-33481772 Msa0808660:CDS 45.0%
!! GCTATGCCTTATTGGGCTTT+TGG + chr5_3:33481760-33481779 Msa0808660:CDS 45.0%
AGGATCAAACCTGCAACAAC+TGG - chr5_3:33482258-33482277 None:intergenic 45.0%
GTTGTTGCAGGTTTGATCCT+CGG + chr5_3:33482258-33482277 Msa0808660:intron 45.0%
TCTCCACAGCCTTGATCATT+TGG + chr5_3:33483807-33483826 Msa0808660:intron 45.0%
ACAGCCTTGATCATTTGGAC+CGG + chr5_3:33483812-33483831 Msa0808660:intron 45.0%
CAGGATTCCATCAATGCAGA+TGG + chr5_3:33484208-33484227 Msa0808660:intron 45.0%
GGATTCCATCAATGCAGATG+GGG + chr5_3:33484210-33484229 Msa0808660:intron 45.0%
GATATCCCCATCTGCATTGA+TGG - chr5_3:33484218-33484237 None:intergenic 45.0%
AAATTCCGCTCGATGTGATC+TGG + chr5_3:33484286-33484305 Msa0808660:CDS 45.0%
CTGGAACGACGATGATCATA+TGG + chr5_3:33484305-33484324 Msa0808660:CDS 45.0%
TTTGGACGAGGGTAGTTCTT+TGG - chr5_3:33484357-33484376 None:intergenic 45.0%
!! AGTTCAGAAGCTTTGGACGA+GGG - chr5_3:33484368-33484387 None:intergenic 45.0%
!! AAGTTCAGAAGCTTTGGACG+AGG - chr5_3:33484369-33484388 None:intergenic 45.0%
CTGGAGTTAACACCAATTCC+AGG - chr5_3:33484441-33484460 None:intergenic 45.0%
AACCTTTCTTGGCTCAAGTG+TGG + chr5_3:33484517-33484536 Msa0808660:CDS 45.0%
ATCCAAAGACGGTATCTTGG+TGG + chr5_3:33484571-33484590 Msa0808660:CDS 45.0%
TCCAAAGACGGTATCTTGGT+GGG + chr5_3:33484572-33484591 Msa0808660:CDS 45.0%
GTACGAGTTCATGAAAGCGA+CGG - chr5_3:33484608-33484627 None:intergenic 45.0%
CATGAACTCGTACCTGTTGA+CGG + chr5_3:33484615-33484634 Msa0808660:CDS 45.0%
ACCAGGATGGATATGTTGCT+TGG + chr5_3:33484725-33484744 Msa0808660:CDS 45.0%
TCCAAGCAACATATCCATCC+TGG - chr5_3:33484729-33484748 None:intergenic 45.0%
!! AGGATCGTCCCATCTTGTTT+TGG - chr5_3:33484766-33484785 None:intergenic 45.0%
!! GTTATAGTGGGTTGCACTAG+TGG - chr5_3:33484844-33484863 None:intergenic 45.0%
AACCCACTATAACGGTGTCT+TGG + chr5_3:33484851-33484870 Msa0808660:CDS 45.0%
CTCCAAGACACCGTTATAGT+GGG - chr5_3:33484856-33484875 None:intergenic 45.0%
ACTCCAAGACACCGTTATAG+TGG - chr5_3:33484857-33484876 None:intergenic 45.0%
AAGGGTCTTCTTGGACTTGA+AGG + chr5_3:33484924-33484943 Msa0808660:CDS 45.0%
GTGGACCGCGACAAAATAAA+AGG - chr5_3:33484957-33484976 None:intergenic 45.0%
TTTGCCCGAACCAACATAAG+TGG - chr5_3:33484976-33484995 None:intergenic 45.0%
!! CATTGGACTGGTGACAATCA+AGG + chr5_3:33485005-33485024 Msa0808660:CDS 45.0%
CTGGTGACAATCAAGGAACA+TGG + chr5_3:33485012-33485031 Msa0808660:CDS 45.0%
CATATGTCGGAACCAACCAT+TGG - chr5_3:33485092-33485111 None:intergenic 45.0%
! ATGGTTGGTTCCGACATATG+TGG + chr5_3:33485092-33485111 Msa0808660:CDS 45.0%
ATTGAGCTACCGAATCCCAT+TGG - chr5_3:33485229-33485248 None:intergenic 45.0%
! GTTTTTCCTTGTTCGAGCAC+CGG - chr5_3:33485431-33485450 None:intergenic 45.0%
!! GTGAAAGCATTGTTTCCTCC+CGG + chr5_3:33485455-33485474 Msa0808660:CDS 45.0%
ACTCACACCATCACATCAAC+AGG + chr5_3:33485503-33485522 Msa0808660:CDS 45.0%
ACTTGATGCACCTCTTCATG+TGG + chr5_3:33485541-33485560 Msa0808660:CDS 45.0%
TGCACATTCACCACATGAAG+AGG - chr5_3:33485554-33485573 None:intergenic 45.0%
ATTCTTCCAATGCAGCAAGG+TGG + chr5_3:33485590-33485609 Msa0808660:CDS 45.0%
ATCAATCCACCTTGCTGCAT+TGG - chr5_3:33485599-33485618 None:intergenic 45.0%
!! GCAAGGTGGATTGATCTCTA+AGG + chr5_3:33485604-33485623 Msa0808660:CDS 45.0%
AATGCAACAACGAGCGTGAA+GGG - chr5_3:33485644-33485663 None:intergenic 45.0%
GCATCAGAAGGAGATGCTAA+AGG + chr5_3:33485674-33485693 Msa0808660:CDS 45.0%
CCGTTTCCAAGCTTCATTTC+TGG - chr5_3:33485728-33485747 None:intergenic 45.0%
GTGGCTTCACTTGAGTTAGA+TGG + chr5_3:33485896-33485915 Msa0808660:CDS 45.0%
CATGTGCATTTGGAAGGTGA+AGG + chr5_3:33485965-33485984 Msa0808660:CDS 45.0%
!!! GTTTAATATTTTTAAAAAAT+AGG - chr5_3:33482567-33482586 None:intergenic 5.0%
GGGTAGTGTCAGGGTAGATA+TGG - chr5_3:33480522-33480541 None:intergenic 50.0%
!! ACCAATAAGGGCACCATCAG+GGG - chr5_3:33480729-33480748 None:intergenic 50.0%
!! GACCAATAAGGGCACCATCA+GGG - chr5_3:33480730-33480749 None:intergenic 50.0%
!! AGACCAATAAGGGCACCATC+AGG - chr5_3:33480731-33480750 None:intergenic 50.0%
GCCCTGATATTCCCCTTCTT+AGG + chr5_3:33480783-33480802 Msa0808660:CDS 50.0%
GACCAGCTGCTATGCCTTAT+TGG + chr5_3:33481752-33481771 Msa0808660:CDS 50.0%
TTACTCCAACGAGTCCACCA+GGG + chr5_3:33483782-33483801 Msa0808660:intron 50.0%
GGTCCAAATGATCAAGGCTG+TGG - chr5_3:33483813-33483832 None:intergenic 50.0%
ACAGCCGGTCCAAATGATCA+AGG - chr5_3:33483819-33483838 None:intergenic 50.0%
TTGATCATTTGGACCGGCTG+TGG + chr5_3:33483818-33483837 Msa0808660:intron 50.0%
TGATCATTTGGACCGGCTGT+GGG + chr5_3:33483819-33483838 Msa0808660:intron 50.0%
TCGTTCCAGATCACATCGAG+CGG - chr5_3:33484294-33484313 None:intergenic 50.0%
! CATCGTTGGCTAAACCCCTT+TGG - chr5_3:33484476-33484495 None:intergenic 50.0%
ACCCACCAAGATACCGTCTT+TGG - chr5_3:33484576-33484595 None:intergenic 50.0%
TCAATCCATAGGCCGTCAAC+AGG - chr5_3:33484630-33484649 None:intergenic 50.0%
TGTCCAAATGGAACAGGACC+AGG + chr5_3:33484708-33484727 Msa0808660:CDS 50.0%
CATCCTGGTCCTGTTCCATT+TGG - chr5_3:33484714-33484733 None:intergenic 50.0%
CAAATGGAACAGGACCAGGA+TGG + chr5_3:33484712-33484731 Msa0808660:CDS 50.0%
CAATCCGTCGCAACTCACAA+GGG + chr5_3:33484906-33484925 Msa0808660:CDS 50.0%
AAGACCCTTGTGAGTTGCGA+CGG - chr5_3:33484913-33484932 None:intergenic 50.0%
GCAACTCACAAGGGTCTTCT+TGG + chr5_3:33484915-33484934 Msa0808660:CDS 50.0%
TTGTCGCGGTCCACTTATGT+TGG + chr5_3:33484963-33484982 Msa0808660:CDS 50.0%
! GCGGTCCACTTATGTTGGTT+CGG + chr5_3:33484968-33484987 Msa0808660:CDS 50.0%
!! CGGTCCACTTATGTTGGTTC+GGG + chr5_3:33484969-33484988 Msa0808660:CDS 50.0%
CGGGCAAATATGCTGCACAT+TGG + chr5_3:33484988-33485007 Msa0808660:CDS 50.0%
ATATCTCCGGTGCTCGAACA+AGG + chr5_3:33485422-33485441 Msa0808660:CDS 50.0%
CATTGTTTCCTCCCGGTAGT+TGG + chr5_3:33485462-33485481 Msa0808660:CDS 50.0%
CACACCATCACATCAACAGG+CGG + chr5_3:33485506-33485525 Msa0808660:CDS 50.0%
AGTTCCGCCTGTTGATGTGA+TGG - chr5_3:33485513-33485532 None:intergenic 50.0%
GAATGCAACAACGAGCGTGA+AGG - chr5_3:33485645-33485664 None:intergenic 50.0%
!! AGATGGAAGTGTTGGAGCAG+TGG + chr5_3:33485877-33485896 Msa0808660:CDS 50.0%
AGAGGGTTGAGCATTCCTGT+TGG + chr5_3:33486022-33486041 Msa0808660:CDS 50.0%
GAGTGAGCAGGGTAGTGTCA+GGG - chr5_3:33480531-33480550 None:intergenic 55.0%
TGAGTGAGCAGGGTAGTGTC+AGG - chr5_3:33480532-33480551 None:intergenic 55.0%
GAGTGAGGAGTGAGTGAGCA+GGG - chr5_3:33480542-33480561 None:intergenic 55.0%
AGAGTGAGGAGTGAGTGAGC+AGG - chr5_3:33480543-33480562 None:intergenic 55.0%
! ACCCCTGATGGTGCCCTTAT+TGG + chr5_3:33480725-33480744 Msa0808660:CDS 55.0%
GCCCAATAAGGCATAGCAGC+TGG - chr5_3:33481757-33481776 None:intergenic 55.0%
TATTATCAGTGCCAGCGGGG+AGG - chr5_3:33482446-33482465 None:intergenic 55.0%
GTTACTCCAACGAGTCCACC+AGG + chr5_3:33483781-33483800 Msa0808660:intron 55.0%
!! AGATACCCTGGTGGACTCGT+TGG - chr5_3:33483790-33483809 None:intergenic 55.0%
TCAAGGCTGTGGAGATACCC+TGG - chr5_3:33483802-33483821 None:intergenic 55.0%
TCCTGCTCAATGAGCCGATC+CGG - chr5_3:33483852-33483871 None:intergenic 55.0%
GGCCACACTTGAGCCAAGAA+AGG - chr5_3:33484522-33484541 None:intergenic 55.0%
TTCTTGGCTCAAGTGTGGCC+TGG + chr5_3:33484522-33484541 Msa0808660:CDS 55.0%
TCTTGGCTCAAGTGTGGCCT+GGG + chr5_3:33484523-33484542 Msa0808660:CDS 55.0%
TCAGGAAAGTTTACCGCCCC+AGG - chr5_3:33484543-33484562 None:intergenic 55.0%
TCGTACCTGTTGACGGCCTA+TGG + chr5_3:33484622-33484641 Msa0808660:CDS 55.0%
GCAATCCGTCGCAACTCACA+AGG + chr5_3:33484905-33484924 Msa0808660:CDS 55.0%
AACAACGAGCGTGAAGGGTG+TGG - chr5_3:33485639-33485658 None:intergenic 55.0%
CACGCTCGTTGTTGCATTCC+CGG + chr5_3:33485646-33485665 Msa0808660:CDS 55.0%
TCTCCTTCTGATGCACCAGC+CGG - chr5_3:33485668-33485687 None:intergenic 55.0%
ATTAGTGTCCACCTCCCCGC+TGG + chr5_3:33482432-33482451 Msa0808660:intron 60.0%
AGGCTGTGGAGATACCCTGG+TGG - chr5_3:33483799-33483818 None:intergenic 60.0%
CTGTGGGACTAACCCCGGAT+CGG + chr5_3:33483835-33483854 Msa0808660:intron 60.0%
CTGCTCAATGAGCCGATCCG+GGG - chr5_3:33483850-33483869 None:intergenic 60.0%
CCTGCTCAATGAGCCGATCC+GGG - chr5_3:33483851-33483870 None:intergenic 60.0%
CTTGGCTCAAGTGTGGCCTG+GGG + chr5_3:33484524-33484543 Msa0808660:CDS 60.0%
CTCGTTGTTGCATTCCCGGC+TGG + chr5_3:33485650-33485669 Msa0808660:CDS 60.0%
TTCCCGGCTGGTGCATCAGA+AGG + chr5_3:33485662-33485681 Msa0808660:CDS 60.0%
CTCCTTCTGATGCACCAGCC+GGG - chr5_3:33485667-33485686 None:intergenic 60.0%
GGTCTGAACTCGGGATGCCG+AGG - chr5_3:33482278-33482297 None:intergenic 65.0%
TATCAGTGCCAGCGGGGAGG+TGG - chr5_3:33482443-33482462 None:intergenic 65.0%
ACCGGCTGTGGGACTAACCC+CGG + chr5_3:33483830-33483849 Msa0808660:intron 65.0%
!! TCCGGGGTTAGTCCCACAGC+CGG - chr5_3:33483834-33483853 None:intergenic 65.0%
! CCCGGATCGGCTCATTGAGC+AGG + chr5_3:33483848-33483867 Msa0808660:intron 65.0%
GGCTCAAGTGTGGCCTGGGG+CGG + chr5_3:33484527-33484546 Msa0808660:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 33480489 33486404 33480489 ID=Msa0808660;Name=Msa0808660
chr5_3 mRNA 33480489 33486404 33480489 ID=Msa0808660-mRNA-1;Parent=Msa0808660;Name=Msa0808660-mRNA-1;_AED=0.04;_eAED=0.04;_QI=98|1|1|1|1|1|3|326|926
chr5_3 exon 33480489 33480816 33480489 ID=Msa0808660-mRNA-1:exon:10788;Parent=Msa0808660-mRNA-1
chr5_3 exon 33481099 33481781 33481099 ID=Msa0808660-mRNA-1:exon:10789;Parent=Msa0808660-mRNA-1
chr5_3 exon 33484211 33486404 33484211 ID=Msa0808660-mRNA-1:exon:10790;Parent=Msa0808660-mRNA-1
chr5_3 five_prime_UTR 33480489 33480586 33480489 ID=Msa0808660-mRNA-1:five_prime_utr;Parent=Msa0808660-mRNA-1
chr5_3 CDS 33480587 33480816 33480587 ID=Msa0808660-mRNA-1:cds;Parent=Msa0808660-mRNA-1
chr5_3 CDS 33481099 33481781 33481099 ID=Msa0808660-mRNA-1:cds;Parent=Msa0808660-mRNA-1
chr5_3 CDS 33484211 33486078 33484211 ID=Msa0808660-mRNA-1:cds;Parent=Msa0808660-mRNA-1
chr5_3 three_prime_UTR 33486079 33486404 33486079 ID=Msa0808660-mRNA-1:three_prime_utr;Parent=Msa0808660-mRNA-1
Gene Sequence

>Msa0808660

ATGGTTTATCCTCACAGTTTAGCATTTCTATGCTTCTCATCTTTTCTTCTAACCCTTCTTCTATTTGCATCTGAGGTTAATTCTTCCTCAAACGCCACCAAAATTGGTCAAGGCTATCGTCTTGTATCCATTGAAGAAACCCCTGATGGTGCCCTTATTGGTCTCCTTCAACTCAACCAGAAAACCAAAATCTATGGCCCTGATATTCCCCTTCTTAGGTTCTATGCTAAGCATGAAACAGAGAACCGTTTAAGAGTACACATAACAGATGCAAACAAGCAAAGATGGGAAGTACCATACAACCTTATCCCAAGAGAACAACCACCACCATTACCACAAACCTTAGGAAAGTTCCAAAAAAACCCTATTGAAGTCTCAGAGTATTCAGGCTCAGAGCTTCTATTCAGCTACATTTCAAACCCATTTAGTTTCTCAGTCAAAAGAAAATCAAATGGTGAAACCCTTTTCAACTCAACTTCAACTTCTTCAGACCCATTTAGTTCACTTGTTTTCAAAGACCAATATCTTGAGATTTCAACAAAATTACCTAAAGATGCATCTTTATATGGTTTGGGAGAGAATACACAACCACATGGGATTAAATTATATCCAAGTGACCCTTATACTTTATATACAACTGATATTTCAGCTATTAATCTTAATGCTGATTTATATGGATCTCATCCTATGTATATGGATCTGAGAAATAATGGTGGAAAAGCTTCAGCACATGCTGTTTTGTTGTTGAATAGTAATGGAATGGATGTGTTTTATAAAGGAACTTCTTTGACTTATAAGGTTATTGGTGGTGTTTTTGATTTTTACTTCTTCTCTGGACCAACTCCTTTGAATGTGGTTGATCAGTATACTACTTTGATTGGAAGACCAGCTGCTATGCCTTATTGGGCTTTTGGATTCCATCAATGCAGATGGGGATATCACAATCTATCAGTTGTTGAAGATGTTGTGGATAGTTACAAGAAGGCTCAAATTCCGCTCGATGTGATCTGGAACGACGATGATCATATGGACGGACACAAAGACTTCACCTTGAATCCAAAGAACTACCCTCGTCCAAAGCTTCTGAACTTCTTGAACAAGATACACAGCATTGGCATGAAATACATTGTCATTATTGACCCTGGAATTGGTGTTAACTCCAGTTATGGTGTATACCAAAGGGGTTTAGCCAACGATGTTTTCATCAAGTATGAAGGTGAACCTTTCTTGGCTCAAGTGTGGCCTGGGGCGGTAAACTTTCCTGATTTTCTCAATCCAAAGACGGTATCTTGGTGGGTCGATGAGATCCGTCGCTTTCATGAACTCGTACCTGTTGACGGCCTATGGATTGACATGAACGAAGCCTCAAATTTCTGTTCTGGTAAATGCAAAATTCCAAAGAACACGATATGTCCAAATGGAACAGGACCAGGATGGATATGTTGCTTGGATTGCAAGAACATCACCAAAACAAGATGGGACGATCCTCCTTACAAGATAAACGCTTCTGGAATACAAGCTCCAATCGGATACAAAACAATAGCCACTAGTGCAACCCACTATAACGGTGTCTTGGAGTATGATGCTCATAGTATCTATGGTTTCTCGCAATCCGTCGCAACTCACAAGGGTCTTCTTGGACTTGAAGGCAAAAGGCCTTTTATTTTGTCGCGGTCCACTTATGTTGGTTCGGGCAAATATGCTGCACATTGGACTGGTGACAATCAAGGAACATGGGAGAATTTAAGGTATTCAATATCCACAATGTTGAATTTCGGTATATTTGGTGTTCCAATGGTTGGTTCCGACATATGTGGATTTTACCCACAACCAACTGAAGAACTTTGCAATAGATGGATTGAAGTTGGTGCTTTCTACCCATTTTCAAGAGATCATGCAAACTACTACTCCCCAAGACAAGAGCTTTACCAATGGGATTCGGTAGCTCAATCTGCGAGAAATGCTTTAGGTATAAGGTACAAGATTCTACCATATCTTTACACCTTAAACTACGAAGCGCATATTACTGGATCACCAATTGCAAGACCACTTTTCTTCACTTTCCCATCTTACACAAAATGTTACGACGTCAGCACTCAGTTTTTACTCGGAAGCAGTCTCATGATATCTCCGGTGCTCGAACAAGGAAAAACACAAGTGAAAGCATTGTTTCCTCCCGGTAGTTGGTACAGTTTACTCGATTGGACTCACACCATCACATCAACAGGCGGAACTTATGTTACACTTGATGCACCTCTTCATGTGGTGAATGTGCATTTATATCAGAACACAATTCTTCCAATGCAGCAAGGTGGATTGATCTCTAAGGATGCTCGAACCACACCCTTCACGCTCGTTGTTGCATTCCCGGCTGGTGCATCAGAAGGAGATGCTAAAGGGACACTTTTCATTGACGACGATGAACTTCCAGAAATGAAGCTTGGAAACGGCTATTCGAGTTTTATCGATCTATATGCTAGTGTCAAACAAGGAGGTGTGAAAGTTTGGTCAGAAGTTCAAGAGGGTAAATTTGCTTTAGACAAAGGTTTGATTATTGATTCCATTTCTGTGTTGGGATTAGATGGAAGTGTTGGAGCAGTGGCTTCACTTGAGTTAGATGGAAAGCCACTAATTGGCTTGTCAAGTGTGAATGTTACTACTTCTGAACATGTGCATTTGGAAGGTGAAGGAAATGGTGAAAGTAAGACTGTGATGGTAACTTTGAGAGGGTTGAGCATTCCTGTTGGTAAAAACTTTGCCATGACATGGAAAATGGGATGA
Protein sequence

>Msa0808660

MVYPHSLAFLCFSSFLLTLLLFASEVNSSSNATKIGQGYRLVSIEETPDGALIGLLQLNQKTKIYGPDIPLLRFYAKHETENRLRVHITDANKQRWEVPYNLIPREQPPPLPQTLGKFQKNPIEVSEYSGSELLFSYISNPFSFSVKRKSNGETLFNSTSTSSDPFSSLVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPSDPYTLYTTDISAINLNADLYGSHPMYMDLRNNGGKASAHAVLLLNSNGMDVFYKGTSLTYKVIGGVFDFYFFSGPTPLNVVDQYTTLIGRPAAMPYWAFGFHQCRWGYHNLSVVEDVVDSYKKAQIPLDVIWNDDDHMDGHKDFTLNPKNYPRPKLLNFLNKIHSIGMKYIVIIDPGIGVNSSYGVYQRGLANDVFIKYEGEPFLAQVWPGAVNFPDFLNPKTVSWWVDEIRRFHELVPVDGLWIDMNEASNFCSGKCKIPKNTICPNGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSATHYNGVLEYDAHSIYGFSQSVATHKGLLGLEGKRPFILSRSTYVGSGKYAAHWTGDNQGTWENLRYSISTMLNFGIFGVPMVGSDICGFYPQPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWDSVAQSARNALGIRYKILPYLYTLNYEAHITGSPIARPLFFTFPSYTKCYDVSTQFLLGSSLMISPVLEQGKTQVKALFPPGSWYSLLDWTHTITSTGGTYVTLDAPLHVVNVHLYQNTILPMQQGGLISKDARTTPFTLVVAFPAGASEGDAKGTLFIDDDELPEMKLGNGYSSFIDLYASVKQGGVKVWSEVQEGKFALDKGLIIDSISVLGLDGSVGAVASLELDGKPLIGLSSVNVTTSEHVHLEGEGNGESKTVMVTLRGLSIPVGKNFAMTWKMG*