AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0809780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809780 MtrunA17_Chr5g0425451 95.556 585 26 0 2 586 3 587 0.0 1168
Msa0809780 MtrunA17_Chr5g0425431 94.530 585 28 2 3 586 4 585 0.0 1143
Msa0809780 MtrunA17_Chr5g0425471 90.753 584 54 0 3 586 4 587 0.0 1112
Msa0809780 MtrunA17_Chr5g0425531 81.880 585 103 2 5 586 6 590 0.0 1003
Msa0809780 MtrunA17_Chr3g0115601 71.039 587 163 3 1 586 1 581 0.0 886
Msa0809780 MtrunA17_Chr1g0207281 53.299 576 259 8 14 586 21 589 0.0 616
Msa0809780 MtrunA17_Chr7g0269871 49.659 586 278 6 3 586 1 571 0.0 602
Msa0809780 MtrunA17_Chr1g0194841 49.830 588 271 7 1 586 1 566 0.0 600
Msa0809780 MtrunA17_Chr5g0411571 50.594 589 262 10 11 585 8 581 0.0 600
Msa0809780 MtrunA17_Chr2g0294751 49.488 586 272 9 3 585 4 568 0.0 583
Msa0809780 MtrunA17_Chr4g0050591 49.829 584 273 9 9 585 14 584 0.0 582
Msa0809780 MtrunA17_Chr2g0278761 49.660 588 276 9 5 585 11 585 0.0 580
Msa0809780 MtrunA17_Chr6g0461231 27.715 617 332 28 35 583 14 584 6.60e-39 151
Msa0809780 MtrunA17_Chr6g0461191 28.067 595 316 25 56 583 35 584 1.61e-38 150
Msa0809780 MtrunA17_Chr2g0292341 27.797 590 324 25 56 583 37 586 9.78e-37 145
Msa0809780 MtrunA17_Chr3g0118971 28.114 594 317 27 56 583 35 584 8.90e-36 142
Msa0809780 MtrunA17_Chr6g0461211 27.319 593 323 26 56 583 35 584 2.31e-33 135
Msa0809780 MtrunA17_Chr3g0104081 25.801 593 348 23 49 584 22 579 5.06e-33 134
Msa0809780 MtrunA17_Chr6g0461221 26.723 595 324 25 56 583 36 585 1.49e-32 133
Msa0809780 MtrunA17_Chr7g0253561 27.094 609 318 26 49 583 4 560 9.10e-32 130
Msa0809780 MtrunA17_Chr5g0429581 24.324 592 355 22 51 584 7 563 1.07e-29 124
Msa0809780 MtrunA17_Chr5g0429541 24.570 582 342 23 56 584 12 549 3.04e-26 113
Msa0809780 MtrunA17_Chr7g0253551 27.021 433 246 18 49 435 29 437 1.64e-25 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809780 AT1G78060.1 65.647 556 187 3 33 586 22 575 0.0 775
Msa0809780 AT5G10560.1 51.661 602 264 9 3 586 1 593 0.0 626
Msa0809780 AT3G19620.1 54.054 555 244 9 35 585 27 574 0.0 619
Msa0809780 AT5G64570.1 51.712 584 265 10 4 585 20 588 0.0 606
Msa0809780 AT5G64570.3 51.712 584 265 10 4 585 20 588 0.0 605
Msa0809780 AT1G02640.1 51.199 584 265 9 7 586 6 573 0.0 604
Msa0809780 AT5G09730.1 51.877 586 263 10 3 585 9 578 0.0 603
Msa0809780 AT5G49360.1 50.862 580 266 10 10 586 14 577 0.0 587
Msa0809780 AT5G64570.2 53.196 438 196 7 149 585 1 430 6.59e-161 474
Msa0809780 AT5G09700.1 49.481 289 142 3 299 585 45 331 3.63e-88 283
Msa0809780 AT3G47000.1 27.181 596 337 26 49 584 10 568 8.79e-35 139
Msa0809780 AT3G47040.4 26.050 595 345 24 49 584 10 568 4.25e-34 137
Msa0809780 AT3G47050.1 26.246 602 341 24 45 584 6 566 8.63e-34 136
Msa0809780 AT5G04885.3 26.020 588 338 23 55 583 36 585 1.42e-33 136
Msa0809780 AT5G04885.1 26.020 588 338 23 55 583 36 585 1.42e-33 136
Msa0809780 AT5G04885.2 26.020 588 338 23 55 583 53 602 1.64e-33 136
Msa0809780 AT3G47010.1 26.342 596 348 26 46 584 8 569 2.52e-33 135
Msa0809780 AT5G20950.2 28.537 417 221 16 59 423 36 427 7.36e-32 130
Msa0809780 AT5G20950.1 28.537 417 221 16 59 423 36 427 7.36e-32 130
Msa0809780 AT5G20950.3 28.537 417 221 16 59 423 114 505 1.05e-31 130
Msa0809780 AT3G47010.2 26.087 598 346 28 46 584 8 568 1.32e-31 130
Msa0809780 AT3G47040.1 25.122 613 353 26 49 584 10 593 2.30e-31 129
Msa0809780 AT5G20940.1 27.816 435 226 18 59 435 42 446 4.22e-30 125
Msa0809780 AT3G47000.3 28.842 423 233 17 49 423 10 412 7.92e-30 122
Msa0809780 AT3G47040.3 28.539 438 240 18 49 435 10 425 6.31e-29 120
Msa0809780 AT3G47010.4 27.002 437 254 18 46 435 8 426 3.16e-27 115
Msa0809780 AT3G62710.1 23.946 664 365 29 3 583 6 612 2.73e-26 114
Msa0809780 AT3G47050.2 26.190 378 215 13 45 376 6 365 1.86e-22 100
Msa0809780 AT3G47010.3 26.265 415 252 20 195 584 5 390 2.57e-20 94.4

Find 152 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAACTATTGATGATTTAT+TGG 0.145046 5_3:+37025967 None:intergenic
CACCAAACATAAACATATTT+AGG 0.152169 5_3:-37029219 Msa0809780:CDS
AATAAGTGATTATGTTATTT+TGG 0.156153 5_3:-37025795 Msa0809780:CDS
TTCTAAGAAGCCTGTTATTT+TGG 0.174390 5_3:-37025672 Msa0809780:CDS
CTGCCTATGATTTGGAAAAT+TGG 0.179123 5_3:-37029036 Msa0809780:CDS
GCTAAGAATAATGACAAAAT+TGG 0.212120 5_3:-37025614 Msa0809780:CDS
TTTGAAGGTGGGAAACTAAT+TGG 0.240728 5_3:-37029097 Msa0809780:CDS
GTAAATAACCTTGGAGTTAT+AGG 0.246042 5_3:-37025998 Msa0809780:CDS
TTGATGATTTATTGGCATTA+GGG 0.250324 5_3:+37025975 None:intergenic
AAGCCCAAGGGATGACGTTT+TGG 0.261397 5_3:-37029243 Msa0809780:CDS
AAACAAGTATCCATATTAAA+AGG 0.276787 5_3:-37025917 Msa0809780:CDS
ACACTTTACTGCCTATGATT+TGG 0.277559 5_3:-37029044 Msa0809780:CDS
TCTTGTCCTCTTCCCCATCT+TGG 0.278328 5_3:+37029193 None:intergenic
ACAAAATTGGAGGCATCATT+TGG 0.281644 5_3:-37025601 Msa0809780:CDS
TTAGGTTACTTTGCAAGATT+TGG 0.284596 5_3:-37028636 Msa0809780:intron
ACTGATTCGGTACCAAAGTT+TGG 0.290827 5_3:+37032522 None:intergenic
ATTGATGATTTATTGGCATT+AGG 0.294469 5_3:+37025974 None:intergenic
TTGGACCAATTCTTCCATAT+TGG 0.298934 5_3:+37026122 None:intergenic
TTCAACTGCTCGGTCAATTT+CGG 0.301407 5_3:+37025826 None:intergenic
TCTTTAGAGCATACTTGATT+TGG 0.301730 5_3:+37026103 None:intergenic
CGAGTTGGTGGTAGCGAGTT+AGG 0.322220 5_3:+37032869 None:intergenic
AATTCTTCCATATTGGAGTT+TGG 0.331399 5_3:+37026129 None:intergenic
CACAAAATTACCAAAATAAC+AGG 0.354358 5_3:+37025662 None:intergenic
CTGATTCGGTACCAAAGTTT+GGG 0.355066 5_3:+37032523 None:intergenic
AAACTCCAATATGGAAGAAT+TGG 0.357083 5_3:-37026127 Msa0809780:CDS
CCTTTGGTAAATTCAAAGTA+TGG 0.359897 5_3:-37029154 Msa0809780:CDS
CTTCAAGGTGATTCCTTTGA+AGG 0.366164 5_3:-37029112 Msa0809780:CDS
AGCCAGACACATTATCGTTC+TGG 0.377925 5_3:-37025878 Msa0809780:CDS
CGGTGTTTCTTACGTTGGTA+AGG 0.380951 5_3:-37032620 Msa0809780:CDS
ATCATTTGGGCTGGTTATCC+TGG 0.383440 5_3:-37025587 Msa0809780:CDS
AATCCAACCAAACTCCAATA+TGG 0.383933 5_3:-37026136 Msa0809780:CDS
GCTGGTTATCCTGGTGAAAC+TGG 0.384326 5_3:-37025578 Msa0809780:CDS
ACATCGGCTACAGCATCTTC+TGG 0.392372 5_3:+37028240 None:intergenic
GCACGGTCGATTTGAGATAT+AGG 0.394607 5_3:+37026208 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5_3:-37029218 Msa0809780:CDS
TGGTGGAAGGGCTCTGGCTC+AGG 0.399913 5_3:-37025558 Msa0809780:CDS
TCCCTAAATATGTTTATGTT+TGG 0.400093 5_3:+37029217 None:intergenic
CAAACCTAGTCTTATTCTAA+TGG 0.402033 5_3:+37026168 None:intergenic
AGATTGTAATCTGCACAGTT+TGG 0.404383 5_3:+37028524 None:intergenic
GCTCTGGCTCAGGTTGTGTT+TGG 0.406314 5_3:-37025548 Msa0809780:CDS
ATAAGACTAGGTTTGTTTGA+TGG 0.411429 5_3:-37026160 Msa0809780:CDS
ACTCCAAGGTTATTTACTCT+TGG 0.413547 5_3:+37026004 None:intergenic
AACAGCTGGTGAAGATCCTT+TGG 0.418172 5_3:-37029170 Msa0809780:CDS
TTTCCCTCAAATTATTCTTA+CGG 0.419729 5_3:-37032560 Msa0809780:CDS
ATAAGTTCCTGTTGCTTACC+TGG 0.420423 5_3:+37025713 None:intergenic
GTGTTTGGTGACTATAACCC+AGG 0.425278 5_3:-37025533 Msa0809780:CDS
GTGCCCAAAACGTCATCCCT+TGG 0.426062 5_3:+37029239 None:intergenic
TGAAACTGGTGGAAGGGCTC+TGG 0.429489 5_3:-37025564 Msa0809780:CDS
TAAGACTAGGTTTGTTTGAT+GGG 0.430129 5_3:-37026159 Msa0809780:CDS
CAAAATTGGAGGCATCATTT+GGG 0.439628 5_3:-37025600 Msa0809780:CDS
TTACAATCTGTTAACCAATT+CGG 0.439859 5_3:-37028510 Msa0809780:CDS
TGCCCAAAACGTCATCCCTT+GGG 0.443887 5_3:+37029240 None:intergenic
CAGCTTCTAGAGCAAGGTCT+AGG 0.448492 5_3:+37026077 None:intergenic
AATTAGTTTCCCACCTTCAA+AGG 0.461085 5_3:+37029099 None:intergenic
AGTTACTGACCTTACTGATT+CGG 0.462510 5_3:+37032509 None:intergenic
TTAGCAAAAGTAATATCAAC+AGG 0.467973 5_3:+37025632 None:intergenic
TGGCTCTTTGAGTGATGGTA+AGG 0.468209 5_3:+37032758 None:intergenic
CTTCCATATTGGAGTTTGGT+TGG 0.474146 5_3:+37026133 None:intergenic
AGAGTTACCAGGTAAGCAAC+AGG 0.474539 5_3:-37025720 Msa0809780:CDS
TCTTATGTGAGAGGACTTCA+AGG 0.479398 5_3:-37029127 Msa0809780:CDS
GAGCCGTGACACGATGTCTT+TGG 0.479861 5_3:+37032738 None:intergenic
AGGTTATTTACTCTTGGAAG+TGG 0.481601 5_3:+37026010 None:intergenic
AATATGGATACTTGTTTACA+AGG 0.482332 5_3:+37025923 None:intergenic
AATGGTAAATTGATTGTGTA+GGG 0.483016 5_3:+37026186 None:intergenic
AGGAGCTGTGTTAACGAGTT+GGG 0.483326 5_3:+37032696 None:intergenic
CATATTTAGGGATCCAAGAT+GGG 0.485529 5_3:-37029206 Msa0809780:CDS
TTGGTGGTGTCACAGGAGTA+AGG 0.487884 5_3:+37032817 None:intergenic
ACATATTTAGGGATCCAAGA+TGG 0.488212 5_3:-37029207 Msa0809780:CDS
GGTAAGGTTGAGATTGCAAA+AGG 0.488527 5_3:+37032774 None:intergenic
CAAGGTGATTCCTTTGAAGG+TGG 0.492851 5_3:-37029109 Msa0809780:CDS
ATCCAGAACGATAATGTGTC+TGG 0.493072 5_3:+37025876 None:intergenic
GTTGTATGAATGAAGGTGAT+TGG 0.496646 5_3:-37029298 Msa0809780:intron
CGGTATATCGAGTCGAGGAA+TGG 0.497501 5_3:+37032672 None:intergenic
GGTTACTTTGCAAGATTTGG+CGG 0.497991 5_3:-37028633 Msa0809780:CDS
AGTATAGAAGAAAACTAACC+TGG 0.500370 5_3:+37025515 None:intergenic
TAATGGTAAATTGATTGTGT+AGG 0.500875 5_3:+37026185 None:intergenic
TCAGGGATGGATTTAGAGTG+TGG 0.502121 5_3:-37026280 Msa0809780:intron
GTCTTTGGCTCTTTGAGTGA+TGG 0.503686 5_3:+37032753 None:intergenic
TGGAACAAGAGTTGGTGAAT+CGG 0.507743 5_3:+37032840 None:intergenic
GTGTTTCCGTCTCTTGACTT+TGG 0.508660 5_3:+37025759 None:intergenic
TATCGTTCTGGATGTACTGA+TGG 0.510353 5_3:-37025866 Msa0809780:CDS
CAGGAGCTGTGTTAACGAGT+TGG 0.510885 5_3:+37032695 None:intergenic
GGTGTTTCTTACGTTGGTAA+GGG 0.513171 5_3:-37032619 Msa0809780:CDS
TGAGGGAAACTAGTTGCAGC+TGG 0.520399 5_3:+37032574 None:intergenic
GTTGAGATTGCAAAAGGGAA+AGG 0.525598 5_3:+37032780 None:intergenic
TGTGCTTACAACCGTGTCAA+TGG 0.530376 5_3:-37028551 Msa0809780:CDS
AAGAATAATGACAAAATTGG+AGG 0.530513 5_3:-37025611 Msa0809780:CDS
GCTAGAGGAGTGTACAATGC+TGG 0.534160 5_3:-37029268 Msa0809780:CDS
ATATCGAGTCGAGGAATGGC+AGG 0.534851 5_3:+37032676 None:intergenic
ATTGGAGGCATCATTTGGGC+TGG 0.536363 5_3:-37025596 Msa0809780:CDS
CTTCCAAGAGTAAATAACCT+TGG 0.537591 5_3:-37026007 Msa0809780:CDS
TCTTGGAAGTGGGAGAATTG+AGG 0.537861 5_3:+37026021 None:intergenic
AAGGTGATTCCTTTGAAGGT+GGG 0.542147 5_3:-37029108 Msa0809780:CDS
TTTGGAAAATTGGAAGGGTG+TGG 0.544458 5_3:-37029026 Msa0809780:CDS
CTATGATTTGGAAAATTGGA+AGG 0.547121 5_3:-37029032 Msa0809780:CDS
TCGATATACCGAGTTATCAA+TGG 0.548701 5_3:-37032660 Msa0809780:CDS
TTCTTGCAGCTTCTAGAGCA+AGG 0.554927 5_3:+37026071 None:intergenic
CAGCCGTAAGAATAATTTGA+GGG 0.555729 5_3:+37032557 None:intergenic
AGGGATCCAAGATGGGGAAG+AGG 0.555974 5_3:-37029199 Msa0809780:CDS
GCCCTTCCACCAGTTTCACC+AGG 0.557917 5_3:+37025569 None:intergenic
ACGTGGGTTGGTGGTGTCAC+AGG 0.558732 5_3:+37032810 None:intergenic
GGTAAGGGGATAATATTGAA+TGG 0.560036 5_3:-37032604 Msa0809780:CDS
TCATTCCACCATTGATAACT+CGG 0.564052 5_3:+37032652 None:intergenic
GCAGCCGTAAGAATAATTTG+AGG 0.566219 5_3:+37032556 None:intergenic
CCATACTTTGAATTTACCAA+AGG 0.567024 5_3:+37029154 None:intergenic
GGTTATTTACTCTTGGAAGT+GGG 0.567937 5_3:+37026011 None:intergenic
ATCCTGGTGAAACTGGTGGA+AGG 0.570539 5_3:-37025571 Msa0809780:CDS
GAAGGTGGGAAACTAATTGG+AGG 0.571323 5_3:-37029094 Msa0809780:CDS
TTTCATAGTTGTGTAGTACA+AGG 0.573509 5_3:-37028593 Msa0809780:CDS
ACTTTGGTACCGAATCAGTA+AGG 0.574437 5_3:-37032518 Msa0809780:intron
GTGTTTCTTACGTTGGTAAG+GGG 0.575186 5_3:-37032618 Msa0809780:CDS
AGAGATGAAAGTAATGGTGA+TGG 0.575947 5_3:+37032906 None:intergenic
AGAGATCATTTAGAGTTACC+AGG 0.579180 5_3:-37025731 Msa0809780:CDS
TACAATGCTGGACAAGCCCA+AGG 0.580349 5_3:-37029256 Msa0809780:CDS
CATCGTGTCACGGCTCACAT+TGG 0.582035 5_3:-37032731 Msa0809780:CDS
TCCTGGTGAAACTGGTGGAA+GGG 0.585464 5_3:-37025570 Msa0809780:CDS
AATGAAAGAGATGAAAGTAA+TGG 0.585553 5_3:+37032900 None:intergenic
GTAGCCGATGTACTTCGAGC+TGG 0.586121 5_3:-37028228 Msa0809780:intron
TTAAATCAGGTATATTGCGT+CGG 0.586898 5_3:-37028313 Msa0809780:intron
TATGGTGTTTCTTATGTGAG+AGG 0.587329 5_3:-37029136 Msa0809780:CDS
GCTCTAGAAGCTGCAAGAAG+TGG 0.588052 5_3:-37026067 Msa0809780:CDS
GAGTAAGGTGGAACAAGAGT+TGG 0.589012 5_3:+37032832 None:intergenic
AATCGGCATGAACGAGTTGG+TGG 0.594003 5_3:+37032857 None:intergenic
ATCTGTTAACCAATTCGGCA+AGG 0.594009 5_3:-37028505 Msa0809780:CDS
TTGCACGGTGTTTCTTACGT+TGG 0.596029 5_3:-37032625 Msa0809780:CDS
GTAGTACAAGGACGATCTAG+TGG 0.601999 5_3:-37028581 Msa0809780:CDS
GGAAGAGGACAAGAAACAGC+TGG 0.605215 5_3:-37029184 Msa0809780:CDS
ATATACCGAGTTATCAATGG+TGG 0.611319 5_3:-37032657 Msa0809780:CDS
GGTTATCCTGGTGAAACTGG+TGG 0.612813 5_3:-37025575 Msa0809780:CDS
CATTAGGGCCTATAACTCCA+AGG 0.613135 5_3:+37025990 None:intergenic
AAAATCATATATGATAGGCA+AGG 0.626341 5_3:-37028276 Msa0809780:CDS
AACACATCTATAGCACAGCA+TGG 0.628376 5_3:-37032935 None:intergenic
GAGCCAAAGACATCGTGTCA+CGG 0.629994 5_3:-37032741 Msa0809780:CDS
GTAAGGTTGAGATTGCAAAA+GGG 0.630373 5_3:+37032775 None:intergenic
TTTACCATTAGAATAAGACT+AGG 0.632704 5_3:-37026172 Msa0809780:CDS
TAAATTGATTGTGTAGGGCA+CGG 0.633005 5_3:+37026191 None:intergenic
ATTGGACCAAAGTCAAGAGA+CGG 0.639353 5_3:-37025765 Msa0809780:CDS
GTGAATCGGCATGAACGAGT+TGG 0.643992 5_3:+37032854 None:intergenic
GTGATTGGAACTGAGGCTAG+AGG 0.649624 5_3:-37029283 Msa0809780:CDS
TATACCAGCTCGAAGTACAT+CGG 0.654635 5_3:+37028224 None:intergenic
AGTTTGGAACTCCATTGACA+CGG 0.658172 5_3:+37028540 None:intergenic
AATGAAGGTGATTGGAACTG+AGG 0.666042 5_3:-37029290 Msa0809780:intron
TACTACACAACTATGAAACG+AGG 0.667994 5_3:+37028598 None:intergenic
TATGATTTGGAAAATTGGAA+GGG 0.673969 5_3:-37029031 Msa0809780:CDS
GTATAGAAGAAAACTAACCT+GGG 0.675632 5_3:+37025516 None:intergenic
ATATTTAGGGATCCAAGATG+GGG 0.682736 5_3:-37029205 Msa0809780:CDS
TGGTGGAATGAAGCGTTGCA+CGG 0.691519 5_3:-37032640 Msa0809780:CDS
TAACTCGGTATATCGAGTCG+AGG 0.696311 5_3:+37032667 None:intergenic
GTGGTGTCACAGGAGTAAGG+TGG 0.707227 5_3:+37032820 None:intergenic
ATGGATACTTGTTTACAAGG+AGG 0.708927 5_3:+37025926 None:intergenic
ACTACACAACTATGAAACGA+GGG 0.709143 5_3:+37028599 None:intergenic
ACAATGCTGGACAAGCCCAA+GGG 0.711926 5_3:-37029255 Msa0809780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATATATTTTAAAAT+CGG + chr5_3:37026285-37026304 None:intergenic 0.0%
!! TATATATATATATATATATT+GGG + chr5_3:37028145-37028164 None:intergenic 0.0%
!! ATATATATATATATATATAT+TGG + chr5_3:37027317-37027336 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG + chr5_3:37027318-37027337 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr5_3:37027317-37027336 None:intergenic 0.0%
!!! CATTTTTATTGAATATATTT+TGG + chr5_3:37026354-37026373 None:intergenic 10.0%
!!! ATAAGTAAATTTTTTTTGTA+GGG + chr5_3:37026564-37026583 None:intergenic 10.0%
!!! TATAAGTAAATTTTTTTTGT+AGG + chr5_3:37026565-37026584 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr5_3:37026625-37026644 None:intergenic 10.0%
!! AAACATAAATTAAACAAATT+TGG - chr5_3:37026874-37026893 Msa0809780:intron 10.0%
!! AAAACTATTAAAATTAAGTA+AGG - chr5_3:37026947-37026966 Msa0809780:intron 10.0%
!!! ATTCAGTTTTATTTTTTTTT+GGG + chr5_3:37027021-37027040 None:intergenic 10.0%
!!! TATTCAGTTTTATTTTTTTT+TGG + chr5_3:37027022-37027041 None:intergenic 10.0%
!! TATATATATATATATATTGG+GGG + chr5_3:37027314-37027333 None:intergenic 10.0%
!! TTAGATTAAAACTATATTAA+TGG + chr5_3:37028924-37028943 None:intergenic 10.0%
!!! TTAATATAGTTTTAATCTAA+CGG - chr5_3:37028233-37028252 Msa0809780:CDS 10.0%
!!! AAATTAGAATAGATAATTTT+CGG + chr5_3:37028353-37028372 None:intergenic 10.0%
!!! CTATTCTAATTTTTTTTTTA+AGG - chr5_3:37028361-37028380 Msa0809780:intron 10.0%
!!! TTAATATAGTTTTAATCTAA+CGG + chr5_3:37028233-37028252 None:intergenic 10.0%
!! TTAGATTAAAACTATATTAA+TGG - chr5_3:37028924-37028943 Msa0809780:intron 10.0%
!! AAAATGGAAAAAAATTAAAA+GGG + chr5_3:37029770-37029789 None:intergenic 10.0%
!! TAAAATGGAAAAAAATTAAA+AGG + chr5_3:37029771-37029790 None:intergenic 10.0%
!!! AGAAAGTATAAATTATTAAA+CGG + chr5_3:37030598-37030617 None:intergenic 10.0%
!!! CTTTTCTATTTTTTATTTTT+TGG - chr5_3:37030664-37030683 Msa0809780:intron 10.0%
!!! TATTTTTTTGTTTATTTTGT+TGG + chr5_3:37031025-37031044 None:intergenic 10.0%
!! GAAAGAAAAAAAAATAAAAA+AGG - chr5_3:37031135-37031154 Msa0809780:intron 10.0%
!! AAAGCTATTAAAATTAAGTA+AGG + chr5_3:37026535-37026554 None:intergenic 15.0%
!!! AAACAAATTTTATTTTAGCA+AGG + chr5_3:37026596-37026615 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr5_3:37026755-37026774 Msa0809780:intron 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG - chr5_3:37026790-37026809 Msa0809780:intron 15.0%
!! ATATATATATATATAGAGTC+AGG - chr5_3:37027383-37027402 Msa0809780:intron 15.0%
!! ATTGGATTGAATAAAATTAA+CGG + chr5_3:37027456-37027475 None:intergenic 15.0%
!! CAATTATAATTTATTTCCAA+AGG - chr5_3:37027813-37027832 Msa0809780:intron 15.0%
!!! TTATCTTTTAATAGTTTGAT+CGG + chr5_3:37027904-37027923 None:intergenic 15.0%
!! TATATATATATATATGAGAC+AGG + chr5_3:37028125-37028144 None:intergenic 15.0%
!! GATTTCTATTTATAATATGT+AGG + chr5_3:37028469-37028488 None:intergenic 15.0%
!!! TATTTCTAAAATTAAAAGGT+AGG - chr5_3:37028856-37028875 Msa0809780:intron 15.0%
!!! AATTAGTTTACAAAATATGT+GGG + chr5_3:37030064-37030083 None:intergenic 15.0%
!!! AAATTAGTTTACAAAATATG+TGG + chr5_3:37030065-37030084 None:intergenic 15.0%
!!! ATGTGACATTTTATATTTTT+TGG - chr5_3:37030112-37030131 Msa0809780:intron 15.0%
!! AAAATGAAAGAATGATATAT+TGG + chr5_3:37030472-37030491 None:intergenic 15.0%
!! AAGTAAAAAAATTAGTAAGA+TGG + chr5_3:37030647-37030666 None:intergenic 15.0%
!! AAAAAAATAAAAAAGGTAGT+AGG - chr5_3:37031142-37031161 Msa0809780:intron 15.0%
!!! TTGGATATTTATTTTGAATA+TGG - chr5_3:37031254-37031273 Msa0809780:intron 15.0%
!!! TGGATATTTATTTTGAATAT+GGG - chr5_3:37031255-37031274 Msa0809780:intron 15.0%
!!! TATTTTTATGTCAACTTTTT+AGG - chr5_3:37031508-37031527 Msa0809780:intron 15.0%
!!! TATAATTTGTGTTGAAATAA+CGG + chr5_3:37032012-37032031 None:intergenic 15.0%
!!! AATAAGTGATTATGTTATTT+TGG - chr5_3:37032656-37032675 Msa0809780:CDS 15.0%
!! AATAATTTATAACCCATGTT+TGG - chr5_3:37026024-37026043 Msa0809780:CDS 20.0%
!! TCTTAAAAAAATCCAAACAT+GGG + chr5_3:37026039-37026058 None:intergenic 20.0%
!! TTCTTAAAAAAATCCAAACA+TGG + chr5_3:37026040-37026059 None:intergenic 20.0%
!!! TATTTGTTGAAAAGTACATA+TGG - chr5_3:37026328-37026347 Msa0809780:intron 20.0%
!!! ATAGAAACTATGCATTTTTT+TGG + chr5_3:37026389-37026408 None:intergenic 20.0%
!!! GTGTGTTGTTAAAAAAAATA+GGG - chr5_3:37026461-37026480 Msa0809780:intron 20.0%
!!! AATAGGGTTAAATATGTTTT+TGG - chr5_3:37026477-37026496 Msa0809780:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + chr5_3:37026844-37026863 None:intergenic 20.0%
!!! TTTTGGGTAAATTATGTTTT+TGG + chr5_3:37027005-37027024 None:intergenic 20.0%
!! ATAAAACTGAATAGATAGAA+AGG - chr5_3:37027029-37027048 Msa0809780:intron 20.0%
!!! ATAGATAACAAGTTTTTTGT+TGG + chr5_3:37027143-37027162 None:intergenic 20.0%
!!! TTAAAACAATGTTTTGTGTA+CGG + chr5_3:37027201-37027220 None:intergenic 20.0%
!!! TGTTTTAAATAGAAAGTAGT+TGG - chr5_3:37027213-37027232 Msa0809780:intron 20.0%
!!! GTTTTAAATAGAAAGTAGTT+GGG - chr5_3:37027214-37027233 Msa0809780:intron 20.0%
!! AGATTAAATAGATGCAAAAT+TGG + chr5_3:37027686-37027705 None:intergenic 20.0%
!! TAAATTTAACGGTTTAGATT+TGG - chr5_3:37028063-37028082 Msa0809780:intron 20.0%
!! TTAAAACTATATTAATGGCT+AGG + chr5_3:37028929-37028948 None:intergenic 20.0%
!! TAATTTATTCTTTCTTCTCT+TGG - chr5_3:37028316-37028335 Msa0809780:intron 20.0%
!! TCTTTGGTTAAAAAAAACAA+AGG + chr5_3:37028416-37028435 None:intergenic 20.0%
!!! ATAAACAAGGAATTTTTCTT+TGG + chr5_3:37028432-37028451 None:intergenic 20.0%
!! GAATTGGAAAAAAAAATCAA+TGG + chr5_3:37028524-37028543 None:intergenic 20.0%
!! TAATTTATTCTTTCTTCTCT+TGG + chr5_3:37028316-37028335 None:intergenic 20.0%
!!! GATCTTATTTTTTTATAACG+AGG - chr5_3:37029069-37029088 Msa0809780:CDS 20.0%
!! ACCAAACATAAACATATTTA+GGG - chr5_3:37029233-37029252 Msa0809780:CDS 20.0%
!! TATAGTCCTTATTAATTCTA+TGG - chr5_3:37029493-37029512 Msa0809780:intron 20.0%
!! AGTAACCTAAATTATTAGAA+CGG + chr5_3:37029805-37029824 None:intergenic 20.0%
!! CAGTAAAAATCATATATGAT+AGG - chr5_3:37030170-37030189 Msa0809780:intron 20.0%
!!! GGATATTTATTTTGAATGTA+GGG + chr5_3:37030451-37030470 None:intergenic 20.0%
!!! TGGATATTTATTTTGAATGT+AGG + chr5_3:37030452-37030471 None:intergenic 20.0%
!! TATTAAACGGAAAAAAAAAG+AGG + chr5_3:37030585-37030604 None:intergenic 20.0%
!! AATTTATACTTTCTTTGTCA+TGG - chr5_3:37030604-37030623 Msa0809780:intron 20.0%
!! ATAATAATGAAGAAGAAGAT+GGG + chr5_3:37030955-37030974 None:intergenic 20.0%
!! AATTTATACTTCCTTAATCA+TGG + chr5_3:37031091-37031110 None:intergenic 20.0%
!!! CTTTCGATTTTCATTTTTTT+TGG + chr5_3:37031120-37031139 None:intergenic 20.0%
!! AATCTGAAAGTAGAATAAAT+TGG - chr5_3:37031235-37031254 Msa0809780:intron 20.0%
!!! GGATATTTATTTTGAATATG+GGG - chr5_3:37031256-37031275 Msa0809780:intron 20.0%
!!! GACAATTTTTTTCAAAAGTA+GGG - chr5_3:37031286-37031305 Msa0809780:intron 20.0%
!! AAAAGATGTAACATAATTAG+AGG - chr5_3:37031584-37031603 Msa0809780:intron 20.0%
!! AAACAAAATACAAAAGAAGA+AGG + chr5_3:37031725-37031744 None:intergenic 20.0%
!!! TGTCTTAATTTTACTCAATT+TGG - chr5_3:37031806-37031825 Msa0809780:intron 20.0%
!!! CTATTATAATTTTGATGAAC+CGG - chr5_3:37032116-37032135 Msa0809780:intron 20.0%
!!! AAGAACTATTGATGATTTAT+TGG + chr5_3:37032487-37032506 None:intergenic 20.0%
!! AAACAAGTATCCATATTAAA+AGG - chr5_3:37032534-37032553 Msa0809780:CDS 20.0%
!!! TGATTATGTTATTTTGGTTA+TGG - chr5_3:37032662-37032681 Msa0809780:CDS 20.0%
!!! GATTATGTTATTTTGGTTAT+GGG - chr5_3:37032663-37032682 Msa0809780:CDS 20.0%
! AATGAAAGAGATGAAAGTAA+TGG + chr5_3:37025554-37025573 None:intergenic 25.0%
! TTTCCCTCAAATTATTCTTA+CGG - chr5_3:37025891-37025910 Msa0809780:CDS 25.0%
!! CAATAATTCTAGTATTGAGT+CGG - chr5_3:37026161-37026180 Msa0809780:CDS 25.0%
! AATACATATTCAACACATGA+AGG - chr5_3:37026414-37026433 Msa0809780:intron 25.0%
! ATACATATTCAACACATGAA+GGG - chr5_3:37026415-37026434 Msa0809780:intron 25.0%
!! CGTGTGTTGTTAAAAAAAAT+AGG - chr5_3:37026460-37026479 Msa0809780:intron 25.0%
! GTGTTAAGAACTTTATTAGA+AGG + chr5_3:37026820-37026839 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr5_3:37026885-37026904 Msa0809780:intron 25.0%
!!! AGTTGCAGAAATTTTTTGTA+GGG - chr5_3:37026918-37026937 Msa0809780:intron 25.0%
! GTAATAATGTATTTAGAGGT+TGG - chr5_3:37027102-37027121 Msa0809780:intron 25.0%
! GTACGGATAAATTTGTAAAT+TGG + chr5_3:37027184-37027203 None:intergenic 25.0%
! TAAAATTAACGGTTCAGATT+TGG + chr5_3:37027445-37027464 None:intergenic 25.0%
! TACGAAATATTGTAAGTCAT+TGG + chr5_3:37027474-37027493 None:intergenic 25.0%
! ATCTATACATACATGATACA+TGG - chr5_3:37027702-37027721 Msa0809780:intron 25.0%
!!! TGGTCATTATTTTTCTTCAA+TGG - chr5_3:37027722-37027741 Msa0809780:intron 25.0%
!! TATTTTTCTTCAATGGATGT+TGG - chr5_3:37027729-37027748 Msa0809780:intron 25.0%
! GATTAGAAATAAATTCCCAT+CGG + chr5_3:37027933-37027952 None:intergenic 25.0%
! ATTTCTAATCAATTTCATCG+TGG - chr5_3:37027943-37027962 Msa0809780:intron 25.0%
! GTTAAATTTAATTGATCGCA+CGG + chr5_3:37028053-37028072 None:intergenic 25.0%
! GTGCGATCAATTAAATTTAA+CGG - chr5_3:37028052-37028071 Msa0809780:intron 25.0%
!!! TCAAATTTAATTTGACACCT+TGG + chr5_3:37028197-37028216 None:intergenic 25.0%
! TGTATTATATTAAAGAGTCG+TGG + chr5_3:37028491-37028510 None:intergenic 25.0%
! AAAAAAAATCAATGGCTTCA+AGG + chr5_3:37028516-37028535 None:intergenic 25.0%
! ATAAACTATGCTGAGTTAAT+TGG - chr5_3:37028695-37028714 Msa0809780:intron 25.0%
! ATTATGTGTTGTATGAATGA+AGG - chr5_3:37029146-37029165 Msa0809780:CDS 25.0%
! CACCAAACATAAACATATTT+AGG - chr5_3:37029232-37029251 Msa0809780:CDS 25.0%
! TCCCTAAATATGTTTATGTT+TGG + chr5_3:37029237-37029256 None:intergenic 25.0%
!! TATGATTTGGAAAATTGGAA+GGG - chr5_3:37029420-37029439 Msa0809780:intron 25.0%
! AGAGAAAAGAAAACTTACTT+TGG + chr5_3:37029469-37029488 None:intergenic 25.0%
!! AGTAAGTTTTCTTTTCTCTA+TGG - chr5_3:37029470-37029489 Msa0809780:intron 25.0%
! TGTTCTCCATAGAATTAATA+AGG + chr5_3:37029502-37029521 None:intergenic 25.0%
! AATTCTATGGAGAACAAATA+AGG - chr5_3:37029506-37029525 Msa0809780:intron 25.0%
! AAAACTAAAAGACAAATTCC+AGG + chr5_3:37029609-37029628 None:intergenic 25.0%
!! AAGTCATGATTCAATTTTCA+AGG + chr5_3:37029687-37029706 None:intergenic 25.0%
! TGGAAAAAAATTAAAAGGGA+AGG + chr5_3:37029766-37029785 None:intergenic 25.0%
! ACGGATTTGGATTATTAAAA+TGG + chr5_3:37029786-37029805 None:intergenic 25.0%
!! CTAAATTATTAGAACGGATT+TGG + chr5_3:37029799-37029818 None:intergenic 25.0%
! CAAATCCGTTCTAATAATTT+AGG - chr5_3:37029797-37029816 Msa0809780:intron 25.0%
! TTACAATCTGTTAACCAATT+CGG - chr5_3:37029941-37029960 Msa0809780:intron 25.0%
! AGGAAAAAATGGAATTTCAA+TGG - chr5_3:37029966-37029985 Msa0809780:intron 25.0%
! GGAAAAAATGGAATTTCAAT+GGG - chr5_3:37029967-37029986 Msa0809780:intron 25.0%
!! AAAATGTCACATTCACATTT+TGG + chr5_3:37030104-37030123 None:intergenic 25.0%
!!! TATTTTTTGGCTGTTAAATC+AGG - chr5_3:37030125-37030144 Msa0809780:intron 25.0%
! AAAATCATATATGATAGGCA+AGG - chr5_3:37030175-37030194 Msa0809780:intron 25.0%
! TCTGATTATGACATAAACAA+AGG + chr5_3:37030264-37030283 None:intergenic 25.0%
! ATTGTTGTCTTACTTTATCA+AGG - chr5_3:37030326-37030345 Msa0809780:intron 25.0%
! TAGAGTGAACAATTTAACTA+TGG + chr5_3:37030428-37030447 None:intergenic 25.0%
! TAATAATGAAGAAGAAGATG+GGG + chr5_3:37030954-37030973 None:intergenic 25.0%
! CATAATAATGAAGAAGAAGA+TGG + chr5_3:37030956-37030975 None:intergenic 25.0%
! ATAGAAAGAAACTAGTAAGA+TGG - chr5_3:37031048-37031067 Msa0809780:intron 25.0%
!!! GGACAATTTTTTTCAAAAGT+AGG - chr5_3:37031285-37031304 Msa0809780:intron 25.0%
!!! TTTAATTTGCTTATTGCCAA+GGG + chr5_3:37031410-37031429 None:intergenic 25.0%
!!! ATTTAATTTGCTTATTGCCA+AGG + chr5_3:37031411-37031430 None:intergenic 25.0%
! AAGTGTGATTATAAAGCTTA+AGG + chr5_3:37031842-37031861 None:intergenic 25.0%
! TTTGGATTGTTGAAGAATTT+AGG - chr5_3:37031969-37031988 Msa0809780:intron 25.0%
!! TTGTGTGATCAAAAATTTTC+AGG - chr5_3:37032153-37032172 Msa0809780:intron 25.0%
!! TGTGTGATCAAAAATTTTCA+GGG - chr5_3:37032154-37032173 Msa0809780:intron 25.0%
! AATGGTAAATTGATTGTGTA+GGG + chr5_3:37032268-37032287 None:intergenic 25.0%
! TAATGGTAAATTGATTGTGT+AGG + chr5_3:37032269-37032288 None:intergenic 25.0%
! TTTACCATTAGAATAAGACT+AGG - chr5_3:37032279-37032298 Msa0809780:intron 25.0%
!! TTGATGATTTATTGGCATTA+GGG + chr5_3:37032479-37032498 None:intergenic 25.0%
!! ATTGATGATTTATTGGCATT+AGG + chr5_3:37032480-37032499 None:intergenic 25.0%
!! GTTCTTTTAGCAAACTATTT+TGG - chr5_3:37032501-37032520 Msa0809780:intron 25.0%
! AATATGGATACTTGTTTACA+AGG + chr5_3:37032531-37032550 None:intergenic 25.0%
!! AGTGTAAAAGCCTTTTAATA+TGG + chr5_3:37032547-37032566 None:intergenic 25.0%
! CACAAAATTACCAAAATAAC+AGG + chr5_3:37032792-37032811 None:intergenic 25.0%
!!! GTTATTTTGGTAATTTTGTG+TGG - chr5_3:37032792-37032811 Msa0809780:CDS 25.0%
! TTAGCAAAAGTAATATCAAC+AGG + chr5_3:37032822-37032841 None:intergenic 25.0%
! GCTAAGAATAATGACAAAAT+TGG - chr5_3:37032837-37032856 Msa0809780:CDS 25.0%
! AAGAATAATGACAAAATTGG+AGG - chr5_3:37032840-37032859 Msa0809780:CDS 25.0%
! ACAACATTTTGTCACAAACT+TGG + chr5_3:37025976-37025995 None:intergenic 30.0%
AGTTTGTGACAAAATGTTGT+TGG - chr5_3:37025976-37025995 Msa0809780:CDS 30.0%
CGACTCAATACTAGAATTAT+TGG + chr5_3:37026163-37026182 None:intergenic 30.0%
TTTCAAATGAATCCTGTTAC+TGG - chr5_3:37026200-37026219 Msa0809780:CDS 30.0%
TTCAAATGAATCCTGTTACT+GGG - chr5_3:37026201-37026220 Msa0809780:CDS 30.0%
ATTAGTATGTCACATCACAT+CGG - chr5_3:37026244-37026263 Msa0809780:CDS 30.0%
! TTTAAAATCGGGTATCTGTA+TGG + chr5_3:37026273-37026292 None:intergenic 30.0%
! TAGAAGGTCGCAATTTTATA+GGG + chr5_3:37026504-37026523 None:intergenic 30.0%
! TTAGAAGGTCGCAATTTTAT+AGG + chr5_3:37026505-37026524 None:intergenic 30.0%
AAGTAAGGACTAAACTTAGA+AGG + chr5_3:37026520-37026539 None:intergenic 30.0%
! CAAGTTTAGAACACAATGAA+AGG - chr5_3:37026659-37026678 Msa0809780:intron 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG - chr5_3:37026793-37026812 Msa0809780:intron 30.0%
!!! GAGTTGCAGAAATTTTTTGT+AGG - chr5_3:37026917-37026936 Msa0809780:intron 30.0%
! TGAATAGATAGAAAGGTGTA+GGG - chr5_3:37027036-37027055 Msa0809780:intron 30.0%
AACAAACAGTAACATTTCGA+GGG - chr5_3:37027077-37027096 Msa0809780:intron 30.0%
GGGTGTAATAATGTATTTAG+AGG - chr5_3:37027098-37027117 Msa0809780:intron 30.0%
! ATAGAAAGTAGTTGGGATTT+TGG - chr5_3:37027221-37027240 Msa0809780:intron 30.0%
!! GGATTTTGGTAAAATACTAG+TGG - chr5_3:37027235-37027254 Msa0809780:intron 30.0%
ACTTCTACTCAAAAACATGA+AGG + chr5_3:37027281-37027300 None:intergenic 30.0%
! CGGCAAAATAATTTTGCTTA+CGG - chr5_3:37027538-37027557 Msa0809780:intron 30.0%
CTATACCAATATTTGATCGA+AGG - chr5_3:37027636-37027655 Msa0809780:intron 30.0%
TGAATCCTTCGATCAAATAT+TGG + chr5_3:37027644-37027663 None:intergenic 30.0%
TCAAATATATGTACAGTGGA+AGG + chr5_3:37027766-37027785 None:intergenic 30.0%
GCTTAATTCAATTTACAGTG+TGG - chr5_3:37027859-37027878 Msa0809780:intron 30.0%
TAAAAGATAATTTGAGCCGA+TGG - chr5_3:37027914-37027933 Msa0809780:intron 30.0%
AAAAGATAATTTGAGCCGAT+GGG - chr5_3:37027915-37027934 Msa0809780:intron 30.0%
TATATGATCAAATGACACCA+AGG - chr5_3:37028177-37028196 Msa0809780:intron 30.0%
CTATATTAATGGCTAGGATT+TGG + chr5_3:37028222-37028241 None:intergenic 30.0%
GTTATTTGATCAAACATGTG+AGG + chr5_3:37028878-37028897 None:intergenic 30.0%
ACTTGTGGTTAAATAGGAAT+TGG + chr5_3:37028540-37028559 None:intergenic 30.0%
ATTCCTATTTAACCACAAGT+TGG - chr5_3:37028540-37028559 Msa0809780:CDS 30.0%
! GCTTGGAATTTGAACTTTTA+CGG - chr5_3:37028622-37028641 Msa0809780:CDS 30.0%
GTTAATTGGAGTAATGAAAG+AGG - chr5_3:37028709-37028728 Msa0809780:intron 30.0%
TGAGCACTTAATGAATTGAT+TGG - chr5_3:37028896-37028915 Msa0809780:intron 30.0%
!! TCAAATTTAGTTTGACACCT+TGG - chr5_3:37028960-37028979 Msa0809780:intron 30.0%
CCATACTTTGAATTTACCAA+AGG + chr5_3:37029300-37029319 None:intergenic 30.0%
CCTTTGGTAAATTCAAAGTA+TGG - chr5_3:37029297-37029316 Msa0809780:intron 30.0%
! CTTCCAATTTTCCAAATCAT+AGG + chr5_3:37029421-37029440 None:intergenic 30.0%
! CTATGATTTGGAAAATTGGA+AGG - chr5_3:37029419-37029438 Msa0809780:intron 30.0%
! TTAGGTTACTTTGCAAGATT+TGG - chr5_3:37029815-37029834 Msa0809780:intron 30.0%
TTTCATAGTTGTGTAGTACA+AGG - chr5_3:37029858-37029877 Msa0809780:intron 30.0%
TTAAATCAGGTATATTGCGT+CGG - chr5_3:37030138-37030157 Msa0809780:intron 30.0%
AAACAAAATTCTCACATGGT+TGG + chr5_3:37030398-37030417 None:intergenic 30.0%
GCAAAAACAAAATTCTCACA+TGG + chr5_3:37030402-37030421 None:intergenic 30.0%
! TCTTTCATTTTCCCTTTACA+TGG - chr5_3:37030481-37030500 Msa0809780:intron 30.0%
AAAAAGAGGAAAAGGTAGTA+GGG + chr5_3:37030571-37030590 None:intergenic 30.0%
AAAAAAGAGGAAAAGGTAGT+AGG + chr5_3:37030572-37030591 None:intergenic 30.0%
ACGGAAAAAAAAAGAGGAAA+AGG + chr5_3:37030579-37030598 None:intergenic 30.0%
! ATTTTGAATATGGGGTATAG+TGG - chr5_3:37031264-37031283 Msa0809780:intron 30.0%
TTAGTTGAAAAATTCACAGC+AGG - chr5_3:37031434-37031453 Msa0809780:intron 30.0%
!!! TTACTTGTTTAGTTTTCGCT+TGG - chr5_3:37031684-37031703 Msa0809780:intron 30.0%
TATAGACCTTACAGATAAAG+AGG + chr5_3:37031894-37031913 None:intergenic 30.0%
!! CTTTAGAATCATACCATGTT+TGG - chr5_3:37031951-37031970 Msa0809780:intron 30.0%
ATTCTTCAACAATCCAAACA+TGG + chr5_3:37031967-37031986 None:intergenic 30.0%
!! TTATAATTTTGATGAACCGG+TGG - chr5_3:37032119-37032138 Msa0809780:intron 30.0%
!! TGATCAAAAATTTTCAGGGA+TGG - chr5_3:37032158-37032177 Msa0809780:intron 30.0%
!! CAAACCTAGTCTTATTCTAA+TGG + chr5_3:37032286-37032305 None:intergenic 30.0%
! ATAAGACTAGGTTTGTTTGA+TGG - chr5_3:37032291-37032310 Msa0809780:intron 30.0%
! TAAGACTAGGTTTGTTTGAT+GGG - chr5_3:37032292-37032311 Msa0809780:intron 30.0%
AATTCTTCCATATTGGAGTT+TGG + chr5_3:37032325-37032344 None:intergenic 30.0%
AAACTCCAATATGGAAGAAT+TGG - chr5_3:37032324-37032343 Msa0809780:intron 30.0%
!! TCTTTAGAGCATACTTGATT+TGG + chr5_3:37032351-37032370 None:intergenic 30.0%
GTAAATAACCTTGGAGTTAT+AGG - chr5_3:37032453-37032472 Msa0809780:intron 30.0%
!!! TGTTATTTTGGTTATGGGAT+TGG - chr5_3:37032668-37032687 Msa0809780:CDS 30.0%
!! TTCTAAGAAGCCTGTTATTT+TGG - chr5_3:37032779-37032798 Msa0809780:CDS 30.0%
!! ATTTTGGTAATTTTGTGTGG+TGG - chr5_3:37032795-37032814 Msa0809780:CDS 30.0%
AGAGATGAAAGTAATGGTGA+TGG + chr5_3:37025548-37025567 None:intergenic 35.0%
GTAAGGTTGAGATTGCAAAA+GGG + chr5_3:37025679-37025698 None:intergenic 35.0%
TCGATATACCGAGTTATCAA+TGG - chr5_3:37025791-37025810 Msa0809780:CDS 35.0%
ATATACCGAGTTATCAATGG+TGG - chr5_3:37025794-37025813 Msa0809780:CDS 35.0%
! TCATTCCACCATTGATAACT+CGG + chr5_3:37025802-37025821 None:intergenic 35.0%
GGTAAGGGGATAATATTGAA+TGG - chr5_3:37025847-37025866 Msa0809780:CDS 35.0%
CAGCCGTAAGAATAATTTGA+GGG + chr5_3:37025897-37025916 None:intergenic 35.0%
! CTTCTTTTGATCCCAAACTT+TGG - chr5_3:37025917-37025936 Msa0809780:CDS 35.0%
! AGTTACTGACCTTACTGATT+CGG + chr5_3:37025945-37025964 None:intergenic 35.0%
! TTTTAGTACTTACCCAATCC+CGG - chr5_3:37026103-37026122 Msa0809780:CDS 35.0%
ACTCCTAAGTCTCAAACAAT+CGG + chr5_3:37026136-37026155 None:intergenic 35.0%
GTGATGTGACATACTAATTC+AGG + chr5_3:37026242-37026261 None:intergenic 35.0%
AAGTAAGGACTAAACTTACG+AGG - chr5_3:37026962-37026981 Msa0809780:intron 35.0%
! CTGAATAGATAGAAAGGTGT+AGG - chr5_3:37027035-37027054 Msa0809780:intron 35.0%
! GAATAGATAGAAAGGTGTAG+GGG - chr5_3:37027037-37027056 Msa0809780:intron 35.0%
! AAAGGTGTAGGGGTATATAA+GGG - chr5_3:37027047-37027066 Msa0809780:intron 35.0%
CTCGAAATGTTACTGTTTGT+TGG + chr5_3:37027078-37027097 None:intergenic 35.0%
CAACAAACAGTAACATTTCG+AGG - chr5_3:37027076-37027095 Msa0809780:intron 35.0%
ACAAACAGTAACATTTCGAG+GGG - chr5_3:37027078-37027097 Msa0809780:intron 35.0%
TGGTAAAATACTAGTGGAGT+AGG - chr5_3:37027241-37027260 Msa0809780:intron 35.0%
GGTAAAATACTAGTGGAGTA+GGG - chr5_3:37027242-37027261 Msa0809780:intron 35.0%
!!! TAAGTCTTTTGACTTACACC+TGG + chr5_3:37028088-37028107 None:intergenic 35.0%
TGGGTCAAATATATGTACAG+TGG + chr5_3:37027770-37027789 None:intergenic 35.0%
!! GAAGTATTGATTGAAGCCTT+TGG + chr5_3:37027832-37027851 None:intergenic 35.0%
!!! TAAGTCTTTTGACTTACACC+TGG - chr5_3:37028088-37028107 Msa0809780:intron 35.0%
!!! CTTTTTTGCTGGGATAAACA+AGG + chr5_3:37028445-37028464 None:intergenic 35.0%
CTTGTTTATCCCAGCAAAAA+AGG - chr5_3:37028443-37028462 Msa0809780:intron 35.0%
!!! ATATGTAGGCCTTTTTTGCT+GGG + chr5_3:37028455-37028474 None:intergenic 35.0%
!!! AATATGTAGGCCTTTTTTGC+TGG + chr5_3:37028456-37028475 None:intergenic 35.0%
CTCAGCATAGTTTATCTTTG+TGG + chr5_3:37028690-37028709 None:intergenic 35.0%
GATATGATCAAATGACACCA+AGG + chr5_3:37028980-37028999 None:intergenic 35.0%
GTTGTATGAATGAAGGTGAT+TGG - chr5_3:37029153-37029172 Msa0809780:CDS 35.0%
ACATATTTAGGGATCCAAGA+TGG - chr5_3:37029244-37029263 Msa0809780:CDS 35.0%
CATATTTAGGGATCCAAGAT+GGG - chr5_3:37029245-37029264 Msa0809780:CDS 35.0%
ATATTTAGGGATCCAAGATG+GGG - chr5_3:37029246-37029265 Msa0809780:CDS 35.0%
TATGGTGTTTCTTATGTGAG+AGG - chr5_3:37029315-37029334 Msa0809780:intron 35.0%
! AATTAGTTTCCCACCTTCAA+AGG + chr5_3:37029355-37029374 None:intergenic 35.0%
TTTGAAGGTGGGAAACTAAT+TGG - chr5_3:37029354-37029373 Msa0809780:intron 35.0%
ACACTTTACTGCCTATGATT+TGG - chr5_3:37029407-37029426 Msa0809780:intron 35.0%
! CTGCCTATGATTTGGAAAAT+TGG - chr5_3:37029415-37029434 Msa0809780:intron 35.0%
GTCTAGCATTCTTAAAATCG+TGG - chr5_3:37029532-37029551 Msa0809780:intron 35.0%
AGCATTCTTAAAATCGTGGT+TGG - chr5_3:37029536-37029555 Msa0809780:intron 35.0%
GCATTCTTAAAATCGTGGTT+GGG - chr5_3:37029537-37029556 Msa0809780:intron 35.0%
CATTCTTAAAATCGTGGTTG+GGG - chr5_3:37029538-37029557 Msa0809780:intron 35.0%
!!! TTTTGTTTGTTGTGTTGTGC+AGG - chr5_3:37029625-37029644 Msa0809780:intron 35.0%
ACTACACAACTATGAAACGA+GGG + chr5_3:37029855-37029874 None:intergenic 35.0%
TACTACACAACTATGAAACG+AGG + chr5_3:37029856-37029875 None:intergenic 35.0%
AGATTGTAATCTGCACAGTT+TGG + chr5_3:37029930-37029949 None:intergenic 35.0%
!! CACATTCACATTTTGGTGAA+TGG + chr5_3:37030097-37030116 None:intergenic 35.0%
TTACTTTATCAAGGTCCCAA+CGG - chr5_3:37030335-37030354 Msa0809780:intron 35.0%
!! TGAGAAAAGTACTATCCGTT+GGG + chr5_3:37030353-37030372 None:intergenic 35.0%
! CTTTTCTCACTTGCATATGT+AGG - chr5_3:37030364-37030383 Msa0809780:intron 35.0%
GTGTCAATACCTAAAGAATG+TGG + chr5_3:37030884-37030903 None:intergenic 35.0%
GACTTTCGTTGTTGAACTAT+TGG - chr5_3:37030911-37030930 Msa0809780:intron 35.0%
ATATGACATCATCATCCTTC+AGG + chr5_3:37031193-37031212 None:intergenic 35.0%
! GATGATGATGTCATATCAGA+CGG - chr5_3:37031197-37031216 Msa0809780:intron 35.0%
ATATATGTGGGGACTAATGA+TGG + chr5_3:37031343-37031362 None:intergenic 35.0%
GTCAAACCTCTTTATCTGTA+AGG - chr5_3:37031885-37031904 Msa0809780:intron 35.0%
TAAATTGATTGTGTAGGGCA+CGG + chr5_3:37032263-37032282 None:intergenic 35.0%
AATCCAACCAAACTCCAATA+TGG - chr5_3:37032315-37032334 Msa0809780:intron 35.0%
TTGGACCAATTCTTCCATAT+TGG + chr5_3:37032332-37032351 None:intergenic 35.0%
GGTTATTTACTCTTGGAAGT+GGG + chr5_3:37032443-37032462 None:intergenic 35.0%
AGGTTATTTACTCTTGGAAG+TGG + chr5_3:37032444-37032463 None:intergenic 35.0%
CTTCCAAGAGTAAATAACCT+TGG - chr5_3:37032444-37032463 Msa0809780:intron 35.0%
ACTCCAAGGTTATTTACTCT+TGG + chr5_3:37032450-37032469 None:intergenic 35.0%
ATGGATACTTGTTTACAAGG+AGG + chr5_3:37032528-37032547 None:intergenic 35.0%
! TTTTAGCAACTTCAACTGCT+CGG + chr5_3:37032638-37032657 None:intergenic 35.0%
! AGAGATCATTTAGAGTTACC+AGG - chr5_3:37032720-37032739 Msa0809780:CDS 35.0%
!! ACAAAATTGGAGGCATCATT+TGG - chr5_3:37032850-37032869 Msa0809780:CDS 35.0%
!! CAAAATTGGAGGCATCATTT+GGG - chr5_3:37032851-37032870 Msa0809780:CDS 35.0%
!! TGGAACAAGAGTTGGTGAAT+CGG + chr5_3:37025614-37025633 None:intergenic 40.0%
! AAAGGATTTTGTACGTGGGT+TGG + chr5_3:37025656-37025675 None:intergenic 40.0%
! AGGGAAAGGATTTTGTACGT+GGG + chr5_3:37025660-37025679 None:intergenic 40.0%
! AAGGGAAAGGATTTTGTACG+TGG + chr5_3:37025661-37025680 None:intergenic 40.0%
GTTGAGATTGCAAAAGGGAA+AGG + chr5_3:37025674-37025693 None:intergenic 40.0%
GGTAAGGTTGAGATTGCAAA+AGG + chr5_3:37025680-37025699 None:intergenic 40.0%
! GGTGTTTCTTACGTTGGTAA+GGG - chr5_3:37025832-37025851 Msa0809780:CDS 40.0%
! GTGTTTCTTACGTTGGTAAG+GGG - chr5_3:37025833-37025852 Msa0809780:CDS 40.0%
GCAGCCGTAAGAATAATTTG+AGG + chr5_3:37025898-37025917 None:intergenic 40.0%
!! CTGATTCGGTACCAAAGTTT+GGG + chr5_3:37025931-37025950 None:intergenic 40.0%
!! ACTGATTCGGTACCAAAGTT+TGG + chr5_3:37025932-37025951 None:intergenic 40.0%
! ACTTTGGTACCGAATCAGTA+AGG - chr5_3:37025933-37025952 Msa0809780:CDS 40.0%
TTTAGTACTTACCCAATCCC+GGG - chr5_3:37026104-37026123 Msa0809780:CDS 40.0%
TCCTAAGTCTCAAACAATCG+GGG + chr5_3:37026134-37026153 None:intergenic 40.0%
CTCCTAAGTCTCAAACAATC+GGG + chr5_3:37026135-37026154 None:intergenic 40.0%
! TTGTTTGAGACTTAGGAGTG+TGG - chr5_3:37026137-37026156 Msa0809780:CDS 40.0%
AAATGAATCCTGTTACTGGG+CGG - chr5_3:37026204-37026223 Msa0809780:CDS 40.0%
! TTACGAGGTCGCAATTTTGT+AGG - chr5_3:37026977-37026996 Msa0809780:intron 40.0%
! TACGAGGTCGCAATTTTGTA+GGG - chr5_3:37026978-37026997 Msa0809780:intron 40.0%
! GAAAGGTGTAGGGGTATATA+AGG - chr5_3:37027046-37027065 Msa0809780:intron 40.0%
GAAAGAGGGAGAAAGAGATT+AGG + chr5_3:37027507-37027526 None:intergenic 40.0%
AGCAGTGGAAAGAAGAAAGA+AGG - chr5_3:37027974-37027993 Msa0809780:intron 40.0%
GCACCAACTTGTGGTTAAAT+AGG + chr5_3:37028546-37028565 None:intergenic 40.0%
AGAAAGATTGCACCAACTTG+TGG + chr5_3:37028555-37028574 None:intergenic 40.0%
!!! ACACTTTTTCAGCTCATGCT+TGG - chr5_3:37028605-37028624 Msa0809780:CDS 40.0%
AATGAAGGTGATTGGAACTG+AGG - chr5_3:37029161-37029180 Msa0809780:CDS 40.0%
TCTTATGTGAGAGGACTTCA+AGG - chr5_3:37029324-37029343 Msa0809780:intron 40.0%
CTTCAAGGTGATTCCTTTGA+AGG - chr5_3:37029339-37029358 Msa0809780:intron 40.0%
! AAGGTGATTCCTTTGAAGGT+GGG - chr5_3:37029343-37029362 Msa0809780:intron 40.0%
TTTGGAAAATTGGAAGGGTG+TGG - chr5_3:37029425-37029444 Msa0809780:intron 40.0%
ATAACACAACCCTGCAATAC+CGG - chr5_3:37029562-37029581 Msa0809780:intron 40.0%
! GGTTACTTTGCAAGATTTGG+CGG - chr5_3:37029818-37029837 Msa0809780:intron 40.0%
! AGTTTGGAACTCCATTGACA+CGG + chr5_3:37029914-37029933 None:intergenic 40.0%
ATCTGTTAACCAATTCGGCA+AGG - chr5_3:37029946-37029965 Msa0809780:intron 40.0%
!!! CCATTTTTTCCTTGCCGAAT+TGG + chr5_3:37029958-37029977 None:intergenic 40.0%
CCAATTCGGCAAGGAAAAAA+TGG - chr5_3:37029955-37029974 Msa0809780:intron 40.0%
TATACCAGCTCGAAGTACAT+CGG + chr5_3:37030230-37030249 None:intergenic 40.0%
!! GTGAGAAAAGTACTATCCGT+TGG + chr5_3:37030354-37030373 None:intergenic 40.0%
AGAGTCGTCTTGAAGAATGA+TGG + chr5_3:37030532-37030551 None:intergenic 40.0%
! TAAGATGGTGTCAACTGAGA+TGG + chr5_3:37030632-37030651 None:intergenic 40.0%
CCTAAAGAATGTGGTACATG+CGG + chr5_3:37030875-37030894 None:intergenic 40.0%
!! TTTAGGTATTGACACACGAG+TGG - chr5_3:37030889-37030908 Msa0809780:intron 40.0%
CTTTCAGATTTCCTCTTGCA+TGG + chr5_3:37031225-37031244 None:intergenic 40.0%
!! GGCATGGAATTTTTGTTTGC+AGG + chr5_3:37031312-37031331 None:intergenic 40.0%
AATGATGGCTTAGAATGGCA+TGG + chr5_3:37031328-37031347 None:intergenic 40.0%
GGACTAATGATGGCTTAGAA+TGG + chr5_3:37031333-37031352 None:intergenic 40.0%
CATTAGTCCCCACATATATG+AGG - chr5_3:37031344-37031363 Msa0809780:intron 40.0%
ATGGCATGCCTCATATATGT+GGG + chr5_3:37031355-37031374 None:intergenic 40.0%
AATGGCATGCCTCATATATG+TGG + chr5_3:37031356-37031375 None:intergenic 40.0%
GCAGGACTTCAGACAAAAAT+TGG - chr5_3:37031452-37031471 Msa0809780:intron 40.0%
CTTCCATATTGGAGTTTGGT+TGG + chr5_3:37032321-37032340 None:intergenic 40.0%
ATCCAGAACGATAATGTGTC+TGG + chr5_3:37032578-37032597 None:intergenic 40.0%
! TATCGTTCTGGATGTACTGA+TGG - chr5_3:37032585-37032604 Msa0809780:CDS 40.0%
TTCAACTGCTCGGTCAATTT+CGG + chr5_3:37032628-37032647 None:intergenic 40.0%
ATTGGACCAAAGTCAAGAGA+CGG - chr5_3:37032686-37032705 Msa0809780:CDS 40.0%
! ATAAGTTCCTGTTGCTTACC+TGG + chr5_3:37032741-37032760 None:intergenic 40.0%
GAGTAAGGTGGAACAAGAGT+TGG + chr5_3:37025622-37025641 None:intergenic 45.0%
TGGCTCTTTGAGTGATGGTA+AGG + chr5_3:37025696-37025715 None:intergenic 45.0%
!! GTCTTTGGCTCTTTGAGTGA+TGG + chr5_3:37025701-37025720 None:intergenic 45.0%
AGGAGCTGTGTTAACGAGTT+GGG + chr5_3:37025758-37025777 None:intergenic 45.0%
TAACTCGGTATATCGAGTCG+AGG + chr5_3:37025787-37025806 None:intergenic 45.0%
TTGCACGGTGTTTCTTACGT+TGG - chr5_3:37025826-37025845 Msa0809780:CDS 45.0%
CGGTGTTTCTTACGTTGGTA+AGG - chr5_3:37025831-37025850 Msa0809780:CDS 45.0%
TTAGTACTTACCCAATCCCG+GGG - chr5_3:37026105-37026124 Msa0809780:CDS 45.0%
! TCCCCGATTGTTTGAGACTT+AGG - chr5_3:37026130-37026149 Msa0809780:CDS 45.0%
TAATATCACCGCCCAGTAAC+AGG + chr5_3:37026215-37026234 None:intergenic 45.0%
! TGACTTACACCTGGTGTCAA+CGG + chr5_3:37028097-37028116 None:intergenic 45.0%
CCGTGATCACAAGTGAAAGA+GGG + chr5_3:37027521-37027540 None:intergenic 45.0%
CCCTCTTTCACTTGTGATCA+CGG - chr5_3:37027518-37027537 Msa0809780:intron 45.0%
CATCGTCGTTGTTGAACAAG+CGG + chr5_3:37027594-37027613 None:intergenic 45.0%
CTTGTTCAACAACGACGATG+AGG - chr5_3:37027594-37027613 Msa0809780:intron 45.0%
ATTTGACCCACGTGAGAGAT+CGG - chr5_3:37027780-37027799 Msa0809780:intron 45.0%
ATCGTGGCAAAGAAAAGCAG+TGG - chr5_3:37027959-37027978 Msa0809780:intron 45.0%
! TGACTTACACCTGGTGTCAA+CGG - chr5_3:37028097-37028116 Msa0809780:intron 45.0%
AACAGCTGGTGAAGATCCTT+TGG - chr5_3:37029281-37029300 Msa0809780:CDS 45.0%
! CAAGGTGATTCCTTTGAAGG+TGG - chr5_3:37029342-37029361 Msa0809780:intron 45.0%
GAAGGTGGGAAACTAATTGG+AGG - chr5_3:37029357-37029376 Msa0809780:intron 45.0%
GACGTCTAATATGCACAAGC+CGG + chr5_3:37029584-37029603 None:intergenic 45.0%
GTAGTACAAGGACGATCTAG+TGG - chr5_3:37029870-37029889 Msa0809780:intron 45.0%
TGTGCTTACAACCGTGTCAA+TGG - chr5_3:37029900-37029919 Msa0809780:intron 45.0%
ACTTGCATATGTAGGCCAAG+TGG - chr5_3:37030372-37030391 Msa0809780:intron 45.0%
CAAGACGACTCTCGATCAAT+TGG - chr5_3:37030540-37030559 Msa0809780:intron 45.0%
AAGAGGAAAAGGTAGTAGGG+TGG + chr5_3:37030568-37030587 None:intergenic 45.0%
CCGCATGTACCACATTCTTT+AGG - chr5_3:37030872-37030891 Msa0809780:intron 45.0%
CCTTAATCATGGCTCCATCT+CGG + chr5_3:37031080-37031099 None:intergenic 45.0%
TAGGATGATGCCAACTGAGA+GGG - chr5_3:37031161-37031180 Msa0809780:intron 45.0%
TGACATCATCATCCTTCAGG+AGG + chr5_3:37031190-37031209 None:intergenic 45.0%
TGGCATGCCTCATATATGTG+GGG + chr5_3:37031354-37031373 None:intergenic 45.0%
!! CCATCGTTGATGGCTTAGAA+TGG + chr5_3:37031374-37031393 None:intergenic 45.0%
CCATTCTAAGCCATCAACGA+TGG - chr5_3:37031371-37031390 Msa0809780:intron 45.0%
TTGCCAAGGGAAACGATGAT+GGG + chr5_3:37031397-37031416 None:intergenic 45.0%
ATTGCCAAGGGAAACGATGA+TGG + chr5_3:37031398-37031417 None:intergenic 45.0%
CACAACATGTAAATCGCCAC+CGG + chr5_3:37032138-37032157 None:intergenic 45.0%
! TCAGGGATGGATTTAGAGTG+TGG - chr5_3:37032171-37032190 Msa0809780:intron 45.0%
!! GCACGGTCGATTTGAGATAT+AGG + chr5_3:37032246-37032265 None:intergenic 45.0%
!! TTCTTGCAGCTTCTAGAGCA+AGG + chr5_3:37032383-37032402 None:intergenic 45.0%
TCTTGGAAGTGGGAGAATTG+AGG + chr5_3:37032433-37032452 None:intergenic 45.0%
CATTAGGGCCTATAACTCCA+AGG + chr5_3:37032464-37032483 None:intergenic 45.0%
AGCCAGACACATTATCGTTC+TGG - chr5_3:37032573-37032592 Msa0809780:CDS 45.0%
GTGTTTCCGTCTCTTGACTT+TGG + chr5_3:37032695-37032714 None:intergenic 45.0%
AGAGTTACCAGGTAAGCAAC+AGG - chr5_3:37032731-37032750 Msa0809780:CDS 45.0%
!! ATCATTTGGGCTGGTTATCC+TGG - chr5_3:37032864-37032883 Msa0809780:CDS 45.0%
! GTGTTTGGTGACTATAACCC+AGG - chr5_3:37032918-37032937 Msa0809780:CDS 45.0%
!!! TATATATATATTTTAAAATC+GGG + chr5_3:37026284-37026303 None:intergenic 5.0%
!! ATATATATATATATATATTG+GGG + chr5_3:37027315-37027334 None:intergenic 5.0%
!!! AAATTATTTCTAAAATTAAA+AGG - chr5_3:37028852-37028871 Msa0809780:intron 5.0%
!!! ATGTTTTAAATTTAAAATTA+TGG + chr5_3:37032087-37032106 None:intergenic 5.0%
! AATCGGCATGAACGAGTTGG+TGG + chr5_3:37025597-37025616 None:intergenic 50.0%
GTGAATCGGCATGAACGAGT+TGG + chr5_3:37025600-37025619 None:intergenic 50.0%
!! TTGGTGGTGTCACAGGAGTA+AGG + chr5_3:37025637-37025656 None:intergenic 50.0%
!!! GGATTTTGTACGTGGGTTGG+TGG + chr5_3:37025653-37025672 None:intergenic 50.0%
GAGCCAAAGACATCGTGTCA+CGG - chr5_3:37025710-37025729 Msa0809780:CDS 50.0%
CAGGAGCTGTGTTAACGAGT+TGG + chr5_3:37025759-37025778 None:intergenic 50.0%
ATATCGAGTCGAGGAATGGC+AGG + chr5_3:37025778-37025797 None:intergenic 50.0%
CGGTATATCGAGTCGAGGAA+TGG + chr5_3:37025782-37025801 None:intergenic 50.0%
!! TGGTGGAATGAAGCGTTGCA+CGG - chr5_3:37025811-37025830 Msa0809780:CDS 50.0%
TGAGGGAAACTAGTTGCAGC+TGG + chr5_3:37025880-37025899 None:intergenic 50.0%
TCAAACAATCGGGGAAACCC+CGG + chr5_3:37026125-37026144 None:intergenic 50.0%
GCCGTGATCACAAGTGAAAG+AGG + chr5_3:37027522-37027541 None:intergenic 50.0%
GTGATTGGAACTGAGGCTAG+AGG - chr5_3:37029168-37029187 Msa0809780:CDS 50.0%
! GCTAGAGGAGTGTACAATGC+TGG - chr5_3:37029183-37029202 Msa0809780:CDS 50.0%
TACAATGCTGGACAAGCCCA+AGG - chr5_3:37029195-37029214 Msa0809780:CDS 50.0%
ACAATGCTGGACAAGCCCAA+GGG - chr5_3:37029196-37029215 Msa0809780:CDS 50.0%
! AAGCCCAAGGGATGACGTTT+TGG - chr5_3:37029208-37029227 Msa0809780:CDS 50.0%
! AGCCCAAGGGATGACGTTTT+GGG - chr5_3:37029209-37029228 Msa0809780:CDS 50.0%
TGCCCAAAACGTCATCCCTT+GGG + chr5_3:37029214-37029233 None:intergenic 50.0%
TCTTGTCCTCTTCCCCATCT+TGG + chr5_3:37029261-37029280 None:intergenic 50.0%
GGAAGAGGACAAGAAACAGC+TGG - chr5_3:37029267-37029286 Msa0809780:CDS 50.0%
ATGCACAAGCCGGTATTGCA+GGG + chr5_3:37029574-37029593 None:intergenic 50.0%
TATGCACAAGCCGGTATTGC+AGG + chr5_3:37029575-37029594 None:intergenic 50.0%
GTGCATATTAGACGTCGTCC+TGG - chr5_3:37029588-37029607 Msa0809780:intron 50.0%
! ACATCGGCTACAGCATCTTC+TGG + chr5_3:37030214-37030233 None:intergenic 50.0%
! TTCTCACATGGTTGGCCACT+TGG + chr5_3:37030390-37030409 None:intergenic 50.0%
ACGGCATGACGCCATGTAAA+GGG + chr5_3:37030495-37030514 None:intergenic 50.0%
!! TAAGATGGTGCCATCCGAGA+TGG - chr5_3:37031063-37031082 Msa0809780:intron 50.0%
AATCATGGCTCCATCTCGGA+TGG + chr5_3:37031076-37031095 None:intergenic 50.0%
CCGAGATGGAGCCATGATTA+AGG - chr5_3:37031077-37031096 Msa0809780:intron 50.0%
GTAGGATGATGCCAACTGAG+AGG - chr5_3:37031160-37031179 Msa0809780:intron 50.0%
!! CAGCTTCTAGAGCAAGGTCT+AGG + chr5_3:37032377-37032396 None:intergenic 50.0%
!! GCTCTAGAAGCTGCAAGAAG+TGG - chr5_3:37032384-37032403 Msa0809780:intron 50.0%
!! ATTGGAGGCATCATTTGGGC+TGG - chr5_3:37032855-37032874 Msa0809780:CDS 50.0%
GCTGGTTATCCTGGTGAAAC+TGG - chr5_3:37032873-37032892 Msa0809780:CDS 50.0%
GGTTATCCTGGTGAAACTGG+TGG - chr5_3:37032876-37032895 Msa0809780:CDS 50.0%
ATCCTGGTGAAACTGGTGGA+AGG - chr5_3:37032880-37032899 Msa0809780:CDS 50.0%
TCCTGGTGAAACTGGTGGAA+GGG - chr5_3:37032881-37032900 Msa0809780:CDS 50.0%
!! CGAGTTGGTGGTAGCGAGTT+AGG + chr5_3:37025585-37025604 None:intergenic 55.0%
!! GTGGTGTCACAGGAGTAAGG+TGG + chr5_3:37025634-37025653 None:intergenic 55.0%
GAGCCGTGACACGATGTCTT+TGG + chr5_3:37025716-37025735 None:intergenic 55.0%
CATCGTGTCACGGCTCACAT+TGG - chr5_3:37025720-37025739 Msa0809780:CDS 55.0%
CAAACAATCGGGGAAACCCC+GGG + chr5_3:37026124-37026143 None:intergenic 55.0%
AGTCAGGATCCGTTGACACC+AGG - chr5_3:37027399-37027418 Msa0809780:intron 55.0%
AGACAGGATCCGTTGACACC+AGG + chr5_3:37028109-37028128 None:intergenic 55.0%
GTGCCCAAAACGTCATCCCT+TGG + chr5_3:37029215-37029234 None:intergenic 55.0%
AGGGATCCAAGATGGGGAAG+AGG - chr5_3:37029252-37029271 Msa0809780:CDS 55.0%
GTAGCCGATGTACTTCGAGC+TGG - chr5_3:37030223-37030242 Msa0809780:intron 55.0%
GACGGCATGACGCCATGTAA+AGG + chr5_3:37030496-37030515 None:intergenic 55.0%
CGTCATGCCGTCATCTCAGA+TGG - chr5_3:37030504-37030523 Msa0809780:intron 55.0%
!! ATCAGACGGTGCCATGCAAG+AGG - chr5_3:37031211-37031230 Msa0809780:intron 55.0%
!! CGATGATGGGCCATCGTTGA+TGG + chr5_3:37031384-37031403 None:intergenic 55.0%
TGGCCCATCATCGTTTCCCT+TGG - chr5_3:37031391-37031410 Msa0809780:intron 55.0%
TGAAACTGGTGGAAGGGCTC+TGG - chr5_3:37032887-37032906 Msa0809780:CDS 55.0%
! GCTCTGGCTCAGGTTGTGTT+TGG - chr5_3:37032903-37032922 Msa0809780:CDS 55.0%
!! ACGTGGGTTGGTGGTGTCAC+AGG + chr5_3:37025644-37025663 None:intergenic 60.0%
ATCGGGGAAACCCCGGGATT+GGG + chr5_3:37026118-37026137 None:intergenic 60.0%
AATCGGGGAAACCCCGGGAT+TGG + chr5_3:37026119-37026138 None:intergenic 60.0%
!! GCAGCACCGATCTCTCACGT+GGG + chr5_3:37027789-37027808 None:intergenic 60.0%
!! AGCAGCACCGATCTCTCACG+TGG + chr5_3:37027790-37027809 None:intergenic 60.0%
CAGGAGGACTCCCTCTCAGT+TGG + chr5_3:37031174-37031193 None:intergenic 60.0%
CTGAGAGGGAGTCCTCCTGA+AGG - chr5_3:37031175-37031194 Msa0809780:intron 60.0%
GCCCTTCCACCAGTTTCACC+AGG + chr5_3:37032885-37032904 None:intergenic 60.0%
! TGGTGGAAGGGCTCTGGCTC+AGG - chr5_3:37032893-37032912 Msa0809780:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 37025529 37032944 37025529 ID=Msa0809780;Name=Msa0809780
chr5_3 mRNA 37025529 37032944 37025529 ID=Msa0809780-mRNA-1;Parent=Msa0809780;Name=Msa0809780-mRNA-1;_AED=0.39;_eAED=0.39;_QI=6|0.25|0.2|1|1|1|5|0|586
chr5_3 exon 37025529 37026298 37025529 ID=Msa0809780-mRNA-1:exon:11506;Parent=Msa0809780-mRNA-1
chr5_3 exon 37028229 37028326 37028229 ID=Msa0809780-mRNA-1:exon:11505;Parent=Msa0809780-mRNA-1
chr5_3 exon 37028485 37028654 37028485 ID=Msa0809780-mRNA-1:exon:11504;Parent=Msa0809780-mRNA-1
chr5_3 exon 37029003 37029305 37029003 ID=Msa0809780-mRNA-1:exon:11503;Parent=Msa0809780-mRNA-1
chr5_3 exon 37032519 37032944 37032519 ID=Msa0809780-mRNA-1:exon:11502;Parent=Msa0809780-mRNA-1
chr5_3 five_prime_UTR 37032939 37032944 37032939 ID=Msa0809780-mRNA-1:five_prime_utr;Parent=Msa0809780-mRNA-1
chr5_3 CDS 37032519 37032938 37032519 ID=Msa0809780-mRNA-1:cds;Parent=Msa0809780-mRNA-1
chr5_3 CDS 37029003 37029305 37029003 ID=Msa0809780-mRNA-1:cds;Parent=Msa0809780-mRNA-1
chr5_3 CDS 37028485 37028654 37028485 ID=Msa0809780-mRNA-1:cds;Parent=Msa0809780-mRNA-1
chr5_3 CDS 37028229 37028326 37028229 ID=Msa0809780-mRNA-1:cds;Parent=Msa0809780-mRNA-1
chr5_3 CDS 37025529 37026298 37025529 ID=Msa0809780-mRNA-1:cds;Parent=Msa0809780-mRNA-1
Gene Sequence

>Msa0809780

ATGGACTTTTCCATCACCATTACTTTCATCTCTTTCATTTTACTCTTCCTAACTCGCTACCACCAACTCGTTCATGCCGATTCACCAACTCTTGTTCCACCTTACTCCTGTGACACCACCAACCCACGTACAAAATCCTTTCCCTTTTGCAATCTCAACCTTACCATCACTCAAAGAGCCAAAGACATCGTGTCACGGCTCACATTGGATGAGAAAGTCTCCCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGATATACCGAGTTATCAATGGTGGAATGAAGCGTTGCACGGTGTTTCTTACGTTGGTAAGGGGATAATATTGAATGGTAGTATTCCAGCTGCAACTAGTTTCCCTCAAATTATTCTTACGGCTGCTTCTTTTGATCCCAAACTTTGGTACCGAATCAGTAAGGTGATTGGAACTGAGGCTAGAGGAGTGTACAATGCTGGACAAGCCCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGATCCAAGATGGGGAAGAGGACAAGAAACAGCTGGTGAAGATCCTTTGGTAAATTCAAAGTATGGTGTTTCTTATGTGAGAGGACTTCAAGGTGATTCCTTTGAAGGTGGGAAACTAATTGGAGGTCGTCTTAAAGCTTCTGCTTGTTGCAAACACTTTACTGCCTATGATTTGGAAAATTGGAAGGGTGTGGATCGTTATGTTTTTGATGCCAAAGTTACTTTGCAAGATTTGGCGGATACGTATCAACCCTCGTTTCATAGTTGTGTAGTACAAGGACGATCTAGTGGAATAATGTGTGCTTACAACCGTGTCAATGGAGTTCCAAACTGTGCAGATTACAATCTGTTAACCAATTCGGCAAGGAAAAAATGGAATTTCAATGGGTATATTGCGTCGGATTGTGACGCAGTAAAAATCATATATGATAGGCAAGGTTATGCAAAGACACCAGAAGATGCTGTAGCCGATGTACTTCGAGCTGGGATGGATTTAGAGTGTGGTGACTACATGACAAAGCATGCAAAGTCAGCAGTATTACAAAAAAAAATTCCTATATCTCAAATCGACCGTGCCCTACACAATCAATTTACCATTAGAATAAGACTAGGTTTGTTTGATGGGAATCCAACCAAACTCCAATATGGAAGAATTGGTCCAAATCAAGTATGCTCTAAAGAAAACCTAGACCTTGCTCTAGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATAACCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCAATAGTTCTTTTAGCAAACTATTTTGGTCCTCCTTGTAAACAAGTATCCATATTAAAAGGCTTTTACACTTATGCTAGCCAGACACATTATCGTTCTGGATGTACTGATGGAATAAAGTGTGCTTCAGCCGAAATTGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGACCAAAGTCAAGAGACGGAAACACGTGATAGAGATCATTTAGAGTTACCAGGTAAGCAACAGGAACTTATTAACAGTGTTGCTAAAGCTTCTAAGAAGCCTGTTATTTTGGTAATTTTGTGTGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGCATCATTTGGGCTGGTTATCCTGGTGAAACTGGTGGAAGGGCTCTGGCTCAGGTTGTGTTTGGTGACTATAACCCAGGTTAG
Protein sequence

>Msa0809780

MDFSITITFISFILLFLTRYHQLVHADSPTLVPPYSCDTTNPRTKSFPFCNLNLTITQRAKDIVSRLTLDEKVSQLVNTAPAIPRLDIPSYQWWNEALHGVSYVGKGIILNGSIPAATSFPQIILTAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLENWKGVDRYVFDAKVTLQDLADTYQPSFHSCVVQGRSSGIMCAYNRVNGVPNCADYNLLTNSARKKWNFNGYIASDCDAVKIIYDRQGYAKTPEDAVADVLRAGMDLECGDYMTKHAKSAVLQKKIPISQIDRALHNQFTIRIRLGLFDGNPTKLQYGRIGPNQVCSKENLDLALEAARSGIVLLKNTASILPLPRVNNLGVIGPNANKSSIVLLANYFGPPCKQVSILKGFYTYASQTHYRSGCTDGIKCASAEIDRAVEVAKISDYVILVMGLDQSQETETRDRDHLELPGKQQELINSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGETGGRALAQVVFGDYNPG*