Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0809770 | XP_024639583.2 | 95.288 | 191 | 9 | 0 | 1 | 191 | 595 | 785 | 3.13e-115 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0809770 | sp|Q9SGZ5|BXL7_ARATH | 51.813 | 193 | 86 | 4 | 1 | 191 | 580 | 767 | 1.52e-61 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0809770 | G7KA75 | 95.288 | 191 | 9 | 0 | 1 | 191 | 595 | 785 | 1.50e-115 | 355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010820 | Msa0809770 | 0.803413 | 3.528164e-49 | -8.615850e-47 |
| Msa0014800 | Msa0809770 | 0.801145 | 1.033818e-48 | -8.615850e-47 |
| Msa0023000 | Msa0809770 | 0.816404 | 5.627598e-52 | -8.615850e-47 |
| Msa0029260 | Msa0809770 | 0.801481 | 8.822583e-49 | -8.615850e-47 |
| Msa0065950 | Msa0809770 | 0.800474 | 1.416820e-48 | -8.615850e-47 |
| Msa0075500 | Msa0809770 | 0.807838 | 4.155973e-50 | -8.615850e-47 |
| Msa0105620 | Msa0809770 | 0.810023 | 1.416119e-50 | -8.615850e-47 |
| Msa0610390 | Msa0809770 | 0.809594 | 1.752109e-50 | -8.615850e-47 |
| Msa0628740 | Msa0809770 | 0.807696 | 4.455538e-50 | -8.615850e-47 |
| Msa0630950 | Msa0809770 | 0.806749 | 7.072805e-50 | -8.615850e-47 |
| Msa0631350 | Msa0809770 | 0.800661 | 1.297894e-48 | -8.615850e-47 |
| Msa0650920 | Msa0809770 | 0.816953 | 4.239916e-52 | -8.615850e-47 |
| Msa0657460 | Msa0809770 | -0.818580 | 1.819814e-52 | -8.615850e-47 |
| Msa0666140 | Msa0809770 | 0.804721 | 1.885459e-49 | -8.615850e-47 |
| Msa0673470 | Msa0809770 | 0.810342 | 1.209170e-50 | -8.615850e-47 |
| Msa0685140 | Msa0809770 | 0.801905 | 7.221966e-49 | -8.615850e-47 |
| Msa0692940 | Msa0809770 | 0.823918 | 1.069273e-53 | -8.615850e-47 |
| Msa0702370 | Msa0809770 | 0.814295 | 1.657109e-51 | -8.615850e-47 |
| Msa0711780 | Msa0809770 | 0.801220 | 9.978457e-49 | -8.615850e-47 |
| Msa0722020 | Msa0809770 | 0.807587 | 4.700055e-50 | -8.615850e-47 |
| Msa0726830 | Msa0809770 | 0.839000 | 2.058152e-57 | -8.615850e-47 |
| Msa0726860 | Msa0809770 | 0.826812 | 2.208943e-54 | -8.615850e-47 |
| Msa0750430 | Msa0809770 | 0.825083 | 5.687203e-54 | -8.615850e-47 |
| Msa0771720 | Msa0809770 | 0.832629 | 8.477936e-56 | -8.615850e-47 |
| Msa0772480 | Msa0809770 | 0.828247 | 9.996558e-55 | -8.615850e-47 |
| Msa0793390 | Msa0809770 | 0.833081 | 6.543142e-56 | -8.615850e-47 |
| Msa0794670 | Msa0809770 | 0.805359 | 1.386761e-49 | -8.615850e-47 |
| Msa0798440 | Msa0809770 | 0.828654 | 7.970489e-55 | -8.615850e-47 |
| Msa0802410 | Msa0809770 | 0.803145 | 4.008806e-49 | -8.615850e-47 |
| Msa0805500 | Msa0809770 | 0.827014 | 1.976675e-54 | -8.615850e-47 |
| Msa0809770 | Msa0809780 | 0.819569 | 1.084351e-52 | -8.615850e-47 |
| Msa0809770 | Msa0830540 | 0.809577 | 1.766763e-50 | -8.615850e-47 |
| Msa0809770 | Msa0839200 | 0.800598 | 1.336855e-48 | -8.615850e-47 |
| Msa0809770 | Msa0842830 | 0.836893 | 7.163854e-57 | -8.615850e-47 |
| Msa0809770 | Msa0869120 | 0.807893 | 4.045679e-50 | -8.615850e-47 |
| Msa0809770 | Msa0872440 | 0.808986 | 2.365455e-50 | -8.615850e-47 |
| Msa0809770 | Msa0930140 | 0.823823 | 1.125431e-53 | -8.615850e-47 |
| Msa0809770 | Msa0933290 | 0.816043 | 6.778581e-52 | -8.615850e-47 |
| Msa0809770 | Msa0942070 | 0.817807 | 2.722220e-52 | -8.615850e-47 |
| Msa0809770 | Msa1084470 | 0.801561 | 8.497707e-49 | -8.615850e-47 |
| Msa0809770 | Msa1088290 | 0.815754 | 7.863249e-52 | -8.615850e-47 |
| Msa0809770 | Msa1100720 | 0.808152 | 3.563880e-50 | -8.615850e-47 |
| Msa0809770 | Msa1126850 | 0.803863 | 2.844877e-49 | -8.615850e-47 |
| Msa0809770 | Msa1137700 | 0.800495 | 1.403249e-48 | -8.615850e-47 |
| Msa0809770 | Msa1152520 | 0.808020 | 3.802673e-50 | -8.615850e-47 |
| Msa0809770 | Msa1165960 | 0.815518 | 8.872827e-52 | -8.615850e-47 |
| Msa0809770 | Msa1209760 | 0.800711 | 1.267738e-48 | -8.615850e-47 |
| Msa0809770 | Msa1224810 | 0.828610 | 8.169425e-55 | -8.615850e-47 |
| Msa0809770 | Msa1267260 | 0.804933 | 1.703068e-49 | -8.615850e-47 |
| Msa0809770 | Msa1294070 | 0.816226 | 6.166622e-52 | -8.615850e-47 |
| Msa0809770 | Msa1348850 | 0.838369 | 2.995293e-57 | -8.615850e-47 |
| Msa0809770 | Msa1412930 | -0.812283 | 4.584125e-51 | -8.615850e-47 |
| Msa0809770 | Msa1436520 | 0.801493 | 8.774044e-49 | -8.615850e-47 |
| Msa0809770 | Msa1452470 | 0.811720 | 6.079013e-51 | -8.615850e-47 |
| Msa0809770 | Msa1461280 | 0.812054 | 5.142683e-51 | -8.615850e-47 |
| Msa0809770 | Msa1465960 | 0.811288 | 7.545457e-51 | -8.615850e-47 |
| Msa0159170 | Msa0809770 | 0.800202 | 1.609857e-48 | -8.615850e-47 |
| Msa0178990 | Msa0809770 | 0.806294 | 8.821113e-50 | -8.615850e-47 |
| Msa0220440 | Msa0809770 | 0.814431 | 1.545917e-51 | -8.615850e-47 |
| Msa0376690 | Msa0809770 | 0.805431 | 1.339082e-49 | -8.615850e-47 |
| Msa0387910 | Msa0809770 | 0.814955 | 1.183736e-51 | -8.615850e-47 |
| Msa0421260 | Msa0809770 | 0.802919 | 4.463639e-49 | -8.615850e-47 |
| Msa0422400 | Msa0809770 | 0.801064 | 1.073857e-48 | -8.615850e-47 |
| Msa0458060 | Msa0809770 | 0.809685 | 1.674986e-50 | -8.615850e-47 |
| Msa0465550 | Msa0809770 | 0.809927 | 1.485119e-50 | -8.615850e-47 |
| Msa0467220 | Msa0809770 | 0.814753 | 1.311878e-51 | -8.615850e-47 |
| Msa0468130 | Msa0809770 | 0.802504 | 5.435986e-49 | -8.615850e-47 |
| Msa0471590 | Msa0809770 | 0.819874 | 9.234286e-53 | -8.615850e-47 |
| Msa0481810 | Msa0809770 | 0.817442 | 3.290163e-52 | -8.615850e-47 |
| Msa0271360 | Msa0809770 | 0.807503 | 4.897323e-50 | -8.615850e-47 |
| Msa0280430 | Msa0809770 | 0.800257 | 1.568518e-48 | -8.615850e-47 |
| Msa0337060 | Msa0809770 | 0.807365 | 5.236838e-50 | -8.615850e-47 |
| Msa0485120 | Msa0809770 | 0.816185 | 6.299146e-52 | -8.615850e-47 |
| Msa0493920 | Msa0809770 | 0.835295 | 1.823873e-56 | -8.615850e-47 |
| Msa0511490 | Msa0809770 | 0.826041 | 3.372691e-54 | -8.615850e-47 |
| Msa0534410 | Msa0809770 | 0.825811 | 3.824329e-54 | -8.615850e-47 |
| Msa0542090 | Msa0809770 | 0.803289 | 3.742063e-49 | -8.615850e-47 |
| Msa0542130 | Msa0809770 | 0.804674 | 1.928543e-49 | -8.615850e-47 |
| Msa0566100 | Msa0809770 | 0.818554 | 1.844672e-52 | -8.615850e-47 |
| Msa0581130 | Msa0809770 | 0.814418 | 1.556690e-51 | -8.615850e-47 |
| Msa0588240 | Msa0809770 | 0.829306 | 5.540433e-55 | -8.615850e-47 |
| Msa0589190 | Msa0809770 | 0.830646 | 2.612147e-55 | -8.615850e-47 |
| Msa0590650 | Msa0809770 | 0.844749 | 6.233900e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0809770 | MtrunA17_Chr5g0425531 | 95.288 | 191 | 9 | 0 | 1 | 191 | 595 | 785 | 2.88e-119 | 355 |
| Msa0809770 | MtrunA17_Chr5g0425471 | 95.288 | 191 | 9 | 0 | 1 | 191 | 592 | 782 | 2.13e-118 | 353 |
| Msa0809770 | MtrunA17_Chr5g0425451 | 94.241 | 191 | 11 | 0 | 1 | 191 | 592 | 782 | 2.09e-117 | 351 |
| Msa0809770 | MtrunA17_Chr5g0425431 | 93.194 | 191 | 13 | 0 | 1 | 191 | 590 | 780 | 8.60e-116 | 346 |
| Msa0809770 | MtrunA17_Chr3g0115601 | 64.398 | 191 | 68 | 0 | 1 | 191 | 586 | 776 | 2.30e-90 | 280 |
| Msa0809770 | MtrunA17_Chr5g0411571 | 39.899 | 198 | 110 | 2 | 1 | 191 | 587 | 782 | 3.11e-44 | 156 |
| Msa0809770 | MtrunA17_Chr2g0294751 | 37.766 | 188 | 105 | 4 | 2 | 187 | 575 | 752 | 4.60e-37 | 135 |
| Msa0809770 | MtrunA17_Chr2g0278761 | 35.751 | 193 | 114 | 4 | 1 | 191 | 591 | 775 | 2.73e-36 | 133 |
| Msa0809770 | MtrunA17_Chr1g0207281 | 35.577 | 208 | 108 | 5 | 1 | 192 | 594 | 791 | 5.69e-35 | 130 |
| Msa0809770 | MtrunA17_Chr4g0050591 | 35.354 | 198 | 108 | 5 | 1 | 191 | 590 | 774 | 9.28e-34 | 126 |
| Msa0809770 | MtrunA17_Chr1g0194841 | 34.848 | 198 | 107 | 5 | 1 | 189 | 571 | 755 | 1.04e-31 | 120 |
| Msa0809770 | MtrunA17_Chr7g0269871 | 35.354 | 198 | 107 | 7 | 1 | 189 | 576 | 761 | 5.37e-29 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0809770 | AT1G78060.1 | 51.813 | 193 | 86 | 4 | 1 | 191 | 580 | 767 | 1.54e-62 | 206 |
| Msa0809770 | AT5G10560.1 | 38.021 | 192 | 115 | 1 | 2 | 189 | 599 | 790 | 5.37e-41 | 147 |
| Msa0809770 | AT5G09700.1 | 38.974 | 195 | 110 | 4 | 1 | 191 | 337 | 526 | 3.27e-34 | 127 |
| Msa0809770 | AT5G09730.1 | 38.071 | 197 | 109 | 5 | 1 | 191 | 584 | 773 | 1.24e-33 | 126 |
| Msa0809770 | AT3G19620.1 | 38.172 | 186 | 101 | 5 | 2 | 181 | 581 | 758 | 2.63e-32 | 122 |
| Msa0809770 | AT1G02640.1 | 35.263 | 190 | 113 | 4 | 1 | 189 | 578 | 758 | 4.41e-32 | 122 |
| Msa0809770 | AT5G64570.1 | 37.879 | 198 | 109 | 4 | 1 | 191 | 594 | 784 | 7.35e-32 | 121 |
| Msa0809770 | AT5G64570.2 | 37.879 | 198 | 109 | 4 | 1 | 191 | 436 | 626 | 8.28e-32 | 120 |
| Msa0809770 | AT5G49360.1 | 37.056 | 197 | 104 | 8 | 1 | 187 | 582 | 768 | 1.78e-31 | 120 |
Find 53 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCATTTCTACCTTTCTT+TGG | 0.223144 | 5_3:+37015130 | None:intergenic |
| TTTGACTGAAATGAAGTTGT+AGG | 0.288846 | 5_3:+37015339 | None:intergenic |
| TTTGAGAGTGTGACGGTAGA+AGG | 0.295260 | 5_3:-37015085 | Msa0809770:CDS |
| TACAAACTTGTTTCAGAGAT+AGG | 0.351981 | 5_3:-37015250 | Msa0809770:CDS |
| AGCAAATGAGAGTGGTGTTA+AGG | 0.359751 | 5_3:-37015008 | Msa0809770:CDS |
| GGAGGTGGAAAGGGTGAAGT+TGG | 0.369858 | 5_3:-37015064 | Msa0809770:CDS |
| ACATTGGGAATTACAAATAC+TGG | 0.373679 | 5_3:-37015193 | Msa0809770:CDS |
| GGTCCAAAGGTCTACGAATT+CGG | 0.387773 | 5_3:-37015388 | Msa0809770:CDS |
| ACAAATACTGGAGGCATGGC+TGG | 0.398922 | 5_3:-37015181 | Msa0809770:CDS |
| AGGAATAATTTGAGTAGCTT+AGG | 0.401616 | 5_3:+37015359 | None:intergenic |
| TAGCCGAATTCGTAGACCTT+TGG | 0.407677 | 5_3:+37015385 | None:intergenic |
| AACCCTACCAACTGTTTCAC+TGG | 0.418928 | 5_3:+37015106 | None:intergenic |
| AGGTGGTTATTTGTTGGTTG+TGG | 0.420306 | 5_3:-37014975 | Msa0809770:CDS |
| TCTCTGAAACAAGTTTGTAA+TGG | 0.433264 | 5_3:+37015254 | None:intergenic |
| AAGCCAAAGAAAGGTAGAAA+TGG | 0.439382 | 5_3:-37015133 | Msa0809770:CDS |
| AATTCCCAATGTGACAGAAA+TGG | 0.462642 | 5_3:+37015204 | None:intergenic |
| ATGTCCATTTCTGTCACATT+GGG | 0.462961 | 5_3:-37015208 | Msa0809770:CDS |
| CTCATTCTCATGTCAGTCAT+TGG | 0.465198 | 5_3:+37015460 | None:intergenic |
| TTATTTGTTGGTTGTGGGAG+AGG | 0.471909 | 5_3:-37014969 | Msa0809770:CDS |
| ACGGTAGAAGGAGGTGGAAA+GGG | 0.488877 | 5_3:-37015073 | Msa0809770:CDS |
| GGTGGTTATTTGTTGGTTGT+GGG | 0.491601 | 5_3:-37014974 | Msa0809770:CDS |
| CATGTCCATTTCTGTCACAT+TGG | 0.509436 | 5_3:-37015209 | Msa0809770:CDS |
| ATGAGGGCTGATCCATCATC+AGG | 0.511303 | 5_3:-37015442 | Msa0809770:CDS |
| GTAGAAACGGTAGGTTCTAC+CGG | 0.511605 | 5_3:+37015414 | None:intergenic |
| TACTCAATAAATATCACTGT+TGG | 0.517582 | 5_3:-37014941 | Msa0809770:CDS |
| CTACCGGGATAGCCTGATGA+TGG | 0.517596 | 5_3:+37015430 | None:intergenic |
| GACGGTAGAAGGAGGTGGAA+AGG | 0.524657 | 5_3:-37015074 | Msa0809770:CDS |
| TTGTTGATTGATTGATGTGA+AGG | 0.527129 | 5_3:+37015308 | None:intergenic |
| TGAAGAAGGTGGTTATTTGT+TGG | 0.528173 | 5_3:-37014981 | Msa0809770:CDS |
| AAGGTCTACGAATTCGGCTA+TGG | 0.539382 | 5_3:-37015382 | Msa0809770:CDS |
| CCTTTGGACCTGTGTAGAAA+CGG | 0.540578 | 5_3:+37015401 | None:intergenic |
| GATCCATCATCAGGCTATCC+CGG | 0.540808 | 5_3:-37015433 | Msa0809770:CDS |
| ATCCAGTGAAACAGTTGGTA+GGG | 0.542668 | 5_3:-37015108 | Msa0809770:CDS |
| TTGTTTGTGAAGCCAAAGAA+AGG | 0.545721 | 5_3:-37015142 | Msa0809770:CDS |
| AGTGTGACGGTAGAAGGAGG+TGG | 0.547541 | 5_3:-37015079 | Msa0809770:CDS |
| AATCCAGTGAAACAGTTGGT+AGG | 0.561271 | 5_3:-37015109 | Msa0809770:CDS |
| GAGAGTGTGACGGTAGAAGG+AGG | 0.561859 | 5_3:-37015082 | Msa0809770:CDS |
| CAAATACTGGAGGCATGGCT+GGG | 0.567905 | 5_3:-37015180 | Msa0809770:CDS |
| CAATGACTGACATGAGAATG+AGG | 0.574292 | 5_3:-37015459 | Msa0809770:CDS |
| GGTAGGGTTTGAGAGTGTGA+CGG | 0.580407 | 5_3:-37015092 | Msa0809770:CDS |
| AATTACAAATACTGGAGGCA+TGG | 0.594236 | 5_3:-37015185 | Msa0809770:CDS |
| CAATGTGACAGAAATGGACA+TGG | 0.599069 | 5_3:+37015210 | None:intergenic |
| GGTGTTAAGGTGATTGAAGA+AGG | 0.603997 | 5_3:-37014995 | Msa0809770:CDS |
| CCGTTTCTACACAGGTCCAA+AGG | 0.609130 | 5_3:-37015401 | Msa0809770:CDS |
| GGCTTCACAAACAACAACAC+AGG | 0.609698 | 5_3:+37015151 | None:intergenic |
| AGAACCTACCGTTTCTACAC+AGG | 0.612051 | 5_3:-37015409 | Msa0809770:CDS |
| GTTAAGGTGATTGAAGAAGG+TGG | 0.615321 | 5_3:-37014992 | Msa0809770:CDS |
| TGGAAATCCAGTGAAACAGT+TGG | 0.620701 | 5_3:-37015113 | Msa0809770:CDS |
| TGGACCTGTGTAGAAACGGT+AGG | 0.625209 | 5_3:+37015405 | None:intergenic |
| TAGAAACGGTAGGTTCTACC+GGG | 0.648311 | 5_3:+37015415 | None:intergenic |
| CTTAGTAGAGCAAATGAGAG+TGG | 0.648348 | 5_3:-37015016 | Msa0809770:CDS |
| AATGACTGACATGAGAATGA+GGG | 0.678215 | 5_3:-37015458 | Msa0809770:CDS |
| TTGGGAATTACAAATACTGG+AGG | 0.696508 | 5_3:-37015190 | Msa0809770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTTGATGAAATCTTTT+GGG | + | chr5_3:37014951-37014970 | None:intergenic | 20.0% |
| !!! | GGTATTTTGATGAAATCTTT+TGG | + | chr5_3:37014952-37014971 | None:intergenic | 25.0% |
| ! | TACTCAATAAATATCACTGT+TGG | - | chr5_3:37015489-37015508 | Msa0809770:CDS | 25.0% |
| AGGAATAATTTGAGTAGCTT+AGG | + | chr5_3:37015074-37015093 | None:intergenic | 30.0% | |
| TTTGACTGAAATGAAGTTGT+AGG | + | chr5_3:37015094-37015113 | None:intergenic | 30.0% | |
| ! | TTGTTGATTGATTGATGTGA+AGG | + | chr5_3:37015125-37015144 | None:intergenic | 30.0% |
| !! | TCTCTGAAACAAGTTTGTAA+TGG | + | chr5_3:37015179-37015198 | None:intergenic | 30.0% |
| ! | TACAAACTTGTTTCAGAGAT+AGG | - | chr5_3:37015180-37015199 | Msa0809770:CDS | 30.0% |
| ACATTGGGAATTACAAATAC+TGG | - | chr5_3:37015237-37015256 | Msa0809770:CDS | 30.0% | |
| TTTCCATTTCTACCTTTCTT+TGG | + | chr5_3:37015303-37015322 | None:intergenic | 30.0% | |
| AATGACTGACATGAGAATGA+GGG | - | chr5_3:37014972-37014991 | Msa0809770:CDS | 35.0% | |
| ATGTCCATTTCTGTCACATT+GGG | - | chr5_3:37015222-37015241 | Msa0809770:CDS | 35.0% | |
| AATTCCCAATGTGACAGAAA+TGG | + | chr5_3:37015229-37015248 | None:intergenic | 35.0% | |
| TTGGGAATTACAAATACTGG+AGG | - | chr5_3:37015240-37015259 | Msa0809770:CDS | 35.0% | |
| AATTACAAATACTGGAGGCA+TGG | - | chr5_3:37015245-37015264 | Msa0809770:CDS | 35.0% | |
| TTGTTTGTGAAGCCAAAGAA+AGG | - | chr5_3:37015288-37015307 | Msa0809770:CDS | 35.0% | |
| AAGCCAAAGAAAGGTAGAAA+TGG | - | chr5_3:37015297-37015316 | Msa0809770:CDS | 35.0% | |
| TGAAGAAGGTGGTTATTTGT+TGG | - | chr5_3:37015449-37015468 | Msa0809770:CDS | 35.0% | |
| CTCATTCTCATGTCAGTCAT+TGG | + | chr5_3:37014973-37014992 | None:intergenic | 40.0% | |
| CAATGACTGACATGAGAATG+AGG | - | chr5_3:37014971-37014990 | Msa0809770:CDS | 40.0% | |
| CAATGTGACAGAAATGGACA+TGG | + | chr5_3:37015223-37015242 | None:intergenic | 40.0% | |
| CATGTCCATTTCTGTCACAT+TGG | - | chr5_3:37015221-37015240 | Msa0809770:CDS | 40.0% | |
| TGGAAATCCAGTGAAACAGT+TGG | - | chr5_3:37015317-37015336 | Msa0809770:CDS | 40.0% | |
| AATCCAGTGAAACAGTTGGT+AGG | - | chr5_3:37015321-37015340 | Msa0809770:CDS | 40.0% | |
| ! | ATCCAGTGAAACAGTTGGTA+GGG | - | chr5_3:37015322-37015341 | Msa0809770:CDS | 40.0% |
| CTTAGTAGAGCAAATGAGAG+TGG | - | chr5_3:37015414-37015433 | Msa0809770:CDS | 40.0% | |
| ! | AGCAAATGAGAGTGGTGTTA+AGG | - | chr5_3:37015422-37015441 | Msa0809770:CDS | 40.0% |
| GGTGTTAAGGTGATTGAAGA+AGG | - | chr5_3:37015435-37015454 | Msa0809770:CDS | 40.0% | |
| GTTAAGGTGATTGAAGAAGG+TGG | - | chr5_3:37015438-37015457 | Msa0809770:CDS | 40.0% | |
| ! | AGGTGGTTATTTGTTGGTTG+TGG | - | chr5_3:37015455-37015474 | Msa0809770:CDS | 40.0% |
| ! | GGTGGTTATTTGTTGGTTGT+GGG | - | chr5_3:37015456-37015475 | Msa0809770:CDS | 40.0% |
| ! | TTATTTGTTGGTTGTGGGAG+AGG | - | chr5_3:37015461-37015480 | Msa0809770:CDS | 40.0% |
| TAGAAACGGTAGGTTCTACC+GGG | + | chr5_3:37015018-37015037 | None:intergenic | 45.0% | |
| GTAGAAACGGTAGGTTCTAC+CGG | + | chr5_3:37015019-37015038 | None:intergenic | 45.0% | |
| AGAACCTACCGTTTCTACAC+AGG | - | chr5_3:37015021-37015040 | Msa0809770:CDS | 45.0% | |
| CCTTTGGACCTGTGTAGAAA+CGG | + | chr5_3:37015032-37015051 | None:intergenic | 45.0% | |
| GGTCCAAAGGTCTACGAATT+CGG | - | chr5_3:37015042-37015061 | Msa0809770:CDS | 45.0% | |
| TAGCCGAATTCGTAGACCTT+TGG | + | chr5_3:37015048-37015067 | None:intergenic | 45.0% | |
| AAGGTCTACGAATTCGGCTA+TGG | - | chr5_3:37015048-37015067 | Msa0809770:CDS | 45.0% | |
| GGCTTCACAAACAACAACAC+AGG | + | chr5_3:37015282-37015301 | None:intergenic | 45.0% | |
| AACCCTACCAACTGTTTCAC+TGG | + | chr5_3:37015327-37015346 | None:intergenic | 45.0% | |
| ! | TTTGAGAGTGTGACGGTAGA+AGG | - | chr5_3:37015345-37015364 | Msa0809770:CDS | 45.0% |
| ATGAGGGCTGATCCATCATC+AGG | - | chr5_3:37014988-37015007 | Msa0809770:CDS | 50.0% | |
| GATCCATCATCAGGCTATCC+CGG | - | chr5_3:37014997-37015016 | Msa0809770:CDS | 50.0% | |
| TGGACCTGTGTAGAAACGGT+AGG | + | chr5_3:37015028-37015047 | None:intergenic | 50.0% | |
| CCGTTTCTACACAGGTCCAA+AGG | - | chr5_3:37015029-37015048 | Msa0809770:CDS | 50.0% | |
| ! | ACAAATACTGGAGGCATGGC+TGG | - | chr5_3:37015249-37015268 | Msa0809770:CDS | 50.0% |
| ! | CAAATACTGGAGGCATGGCT+GGG | - | chr5_3:37015250-37015269 | Msa0809770:CDS | 50.0% |
| ! | GGTAGGGTTTGAGAGTGTGA+CGG | - | chr5_3:37015338-37015357 | Msa0809770:CDS | 50.0% |
| ACGGTAGAAGGAGGTGGAAA+GGG | - | chr5_3:37015357-37015376 | Msa0809770:CDS | 50.0% | |
| CTACCGGGATAGCCTGATGA+TGG | + | chr5_3:37015003-37015022 | None:intergenic | 55.0% | |
| ! | GAGAGTGTGACGGTAGAAGG+AGG | - | chr5_3:37015348-37015367 | Msa0809770:CDS | 55.0% |
| AGTGTGACGGTAGAAGGAGG+TGG | - | chr5_3:37015351-37015370 | Msa0809770:CDS | 55.0% | |
| GACGGTAGAAGGAGGTGGAA+AGG | - | chr5_3:37015356-37015375 | Msa0809770:CDS | 55.0% | |
| GGAGGTGGAAAGGGTGAAGT+TGG | - | chr5_3:37015366-37015385 | Msa0809770:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 37014937 | 37015515 | 37014937 | ID=Msa0809770;Name=Msa0809770 |
| chr5_3 | mRNA | 37014937 | 37015515 | 37014937 | ID=Msa0809770-mRNA-1;Parent=Msa0809770;Name=Msa0809770-mRNA-1;_AED=0.46;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|192 |
| chr5_3 | exon | 37014937 | 37015515 | 37014937 | ID=Msa0809770-mRNA-1:exon:11507;Parent=Msa0809770-mRNA-1 |
| chr5_3 | CDS | 37014937 | 37015515 | 37014937 | ID=Msa0809770-mRNA-1:cds;Parent=Msa0809770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
