Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810550 | sp|Q9C7T4|BH096_ARATH | 46.939 | 343 | 131 | 11 | 1 | 319 | 1 | 316 | 1.91e-83 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810550 | G7KAJ7 | 79.938 | 324 | 41 | 2 | 1 | 324 | 1 | 300 | 0.0 | 525 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0810550 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0732160 | Msa0810550 | 0.811837 | 5.731740e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810550 | MtrunA17_Chr5g0426851 | 79.938 | 324 | 41 | 2 | 1 | 324 | 1 | 300 | 0.0 | 525 |
| Msa0810550 | MtrunA17_Chr3g0132471 | 53.687 | 339 | 117 | 13 | 1 | 321 | 1 | 317 | 1.95e-101 | 301 |
| Msa0810550 | MtrunA17_Chr7g0273081 | 43.902 | 328 | 147 | 12 | 1 | 321 | 14 | 311 | 1.98e-74 | 231 |
| Msa0810550 | MtrunA17_Chr8g0366551 | 53.271 | 214 | 91 | 5 | 113 | 324 | 114 | 320 | 6.50e-67 | 213 |
| Msa0810550 | MtrunA17_Chr1g0191571 | 40.176 | 341 | 161 | 9 | 1 | 319 | 14 | 333 | 3.41e-66 | 211 |
| Msa0810550 | MtrunA17_Chr8g0345871 | 44.660 | 206 | 91 | 3 | 112 | 312 | 170 | 357 | 8.61e-47 | 162 |
| Msa0810550 | MtrunA17_Chr0c01g0489461 | 41.667 | 216 | 116 | 5 | 104 | 312 | 176 | 388 | 1.89e-44 | 156 |
| Msa0810550 | MtrunA17_Chr2g0287761 | 38.068 | 176 | 105 | 2 | 123 | 298 | 1 | 172 | 7.50e-34 | 123 |
| Msa0810550 | MtrunA17_Chr1g0158941 | 30.068 | 296 | 150 | 10 | 46 | 317 | 27 | 289 | 7.71e-26 | 104 |
| Msa0810550 | MtrunA17_Chr3g0126361 | 37.719 | 114 | 66 | 2 | 46 | 154 | 19 | 132 | 4.18e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810550 | AT1G72210.1 | 46.939 | 343 | 131 | 11 | 1 | 319 | 1 | 316 | 1.94e-84 | 258 |
| Msa0810550 | AT1G72210.2 | 45.253 | 316 | 123 | 10 | 1 | 292 | 1 | 290 | 1.12e-72 | 227 |
| Msa0810550 | AT1G22490.1 | 43.976 | 332 | 144 | 12 | 1 | 319 | 1 | 303 | 6.83e-70 | 220 |
| Msa0810550 | AT1G22490.2 | 41.967 | 305 | 136 | 11 | 1 | 292 | 1 | 277 | 4.89e-57 | 187 |
| Msa0810550 | AT4G01460.1 | 39.437 | 213 | 112 | 3 | 113 | 319 | 105 | 306 | 1.08e-42 | 150 |
| Msa0810550 | AT4G01460.2 | 39.437 | 213 | 112 | 3 | 113 | 319 | 105 | 306 | 1.08e-42 | 150 |
| Msa0810550 | AT5G46690.1 | 44.118 | 238 | 89 | 8 | 113 | 319 | 78 | 302 | 6.27e-42 | 148 |
| Msa0810550 | AT5G65320.1 | 40.097 | 207 | 109 | 2 | 119 | 319 | 98 | 295 | 1.55e-41 | 146 |
| Msa0810550 | AT2G46810.2 | 39.614 | 207 | 95 | 5 | 114 | 312 | 112 | 296 | 2.58e-40 | 143 |
| Msa0810550 | AT3G24140.2 | 39.367 | 221 | 118 | 3 | 103 | 312 | 177 | 392 | 3.68e-40 | 145 |
| Msa0810550 | AT3G24140.1 | 39.367 | 221 | 118 | 3 | 103 | 312 | 177 | 392 | 3.73e-40 | 145 |
| Msa0810550 | AT2G46810.3 | 39.614 | 207 | 95 | 5 | 114 | 312 | 172 | 356 | 1.19e-39 | 143 |
| Msa0810550 | AT2G46810.1 | 39.614 | 207 | 95 | 5 | 114 | 312 | 184 | 368 | 1.68e-39 | 143 |
| Msa0810550 | AT3G61950.2 | 38.462 | 208 | 99 | 6 | 112 | 312 | 116 | 301 | 1.12e-38 | 139 |
| Msa0810550 | AT3G61950.1 | 38.462 | 208 | 99 | 6 | 112 | 312 | 167 | 352 | 4.94e-38 | 139 |
| Msa0810550 | AT3G61950.6 | 39.655 | 174 | 78 | 4 | 112 | 279 | 116 | 268 | 1.18e-36 | 134 |
| Msa0810550 | AT2G46810.4 | 41.618 | 173 | 73 | 3 | 114 | 279 | 112 | 263 | 5.22e-36 | 132 |
| Msa0810550 | AT3G61950.3 | 39.655 | 174 | 78 | 4 | 112 | 279 | 167 | 319 | 7.77e-36 | 132 |
| Msa0810550 | AT5G65320.2 | 40.107 | 187 | 97 | 2 | 119 | 299 | 98 | 275 | 4.08e-35 | 129 |
| Msa0810550 | AT5G46690.2 | 43.602 | 211 | 76 | 7 | 113 | 292 | 78 | 276 | 5.70e-35 | 129 |
| Msa0810550 | AT3G06120.1 | 33.333 | 186 | 107 | 3 | 123 | 298 | 1 | 179 | 1.85e-28 | 109 |
| Msa0810550 | AT5G53210.1 | 58.730 | 63 | 26 | 0 | 121 | 183 | 100 | 162 | 3.05e-19 | 87.8 |
| Msa0810550 | AT5G53210.2 | 58.730 | 63 | 26 | 0 | 121 | 183 | 100 | 162 | 3.38e-19 | 87.4 |
| Msa0810550 | AT3G61950.4 | 65.116 | 43 | 15 | 0 | 112 | 154 | 167 | 209 | 1.92e-13 | 68.9 |
| Msa0810550 | AT3G61950.5 | 65.116 | 43 | 15 | 0 | 112 | 154 | 167 | 209 | 1.92e-13 | 68.9 |
Find 65 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACAATATCCTTTCAAAT+TGG | 0.190211 | 5_3:-39086155 | Msa0810550:CDS |
| GGAGGAAGAGTGGAAGTTTC+AGG | 0.205757 | 5_3:+39086081 | None:intergenic |
| CATGTTTCCTCAATACTCTA+TGG | 0.258942 | 5_3:-39085391 | Msa0810550:CDS |
| CATCCACACTGGAAACATTA+AGG | 0.344730 | 5_3:+39085190 | None:intergenic |
| TCACAATATCCTTTCAAATT+GGG | 0.367011 | 5_3:-39086154 | Msa0810550:CDS |
| CCATGCCACGTGACTGATTA+TGG | 0.383936 | 5_3:+39085334 | None:intergenic |
| CATTGGTCTTTAACATTTGA+AGG | 0.384395 | 5_3:+39086120 | None:intergenic |
| TGAGCTATCACGTAGAATTC+AGG | 0.385207 | 5_3:-39084322 | Msa0810550:CDS |
| GTTGTTGGGATTCAAAATCT+TGG | 0.395613 | 5_3:-39085228 | Msa0810550:CDS |
| ACTTGGAGTGGTTTCAACTA+AGG | 0.406246 | 5_3:+39086257 | None:intergenic |
| ATGTTTCCTCAATACTCTAT+GGG | 0.408818 | 5_3:-39085390 | Msa0810550:CDS |
| AGGTCAAGTAATGGCCTTAG+AGG | 0.417204 | 5_3:-39086334 | None:intergenic |
| CGGTGCAATTAACTTCTTGA+AGG | 0.418841 | 5_3:-39085526 | Msa0810550:CDS |
| AGGGGCTATGGTTGTTGTGG+TGG | 0.426444 | 5_3:+39086044 | None:intergenic |
| CCACTCCAAGTGAAGGATCT+TGG | 0.429067 | 5_3:-39086245 | Msa0810550:CDS |
| ATTACCCTTTGTACATAAGT+AGG | 0.439850 | 5_3:+39085880 | None:intergenic |
| CAGGTTATGAAGATGGTTGT+TGG | 0.441455 | 5_3:-39085243 | Msa0810550:CDS |
| AGGTTATGAAGATGGTTGTT+GGG | 0.442208 | 5_3:-39085242 | Msa0810550:CDS |
| CCAAGATCCTTCACTTGGAG+TGG | 0.454095 | 5_3:+39086245 | None:intergenic |
| CTGTAAATCAATGGATATTG+TGG | 0.467398 | 5_3:+39086300 | None:intergenic |
| GCCTCCTACTTATGTACAAA+GGG | 0.472165 | 5_3:-39085884 | Msa0810550:intron |
| GGCAGATATAGAAGTGACTT+TGG | 0.474900 | 5_3:-39085313 | Msa0810550:CDS |
| TGGCTCCAAGATCCTTCACT+TGG | 0.493996 | 5_3:+39086240 | None:intergenic |
| TGTTGTGGTGGATGCAAAAG+TGG | 0.496117 | 5_3:+39086056 | None:intergenic |
| AATTAATAATAGGTAGAAGA+AGG | 0.501607 | 5_3:-39084390 | Msa0810550:intron |
| CGTGACTGATTATGGTTGGT+AGG | 0.510486 | 5_3:+39085342 | None:intergenic |
| CTGCAATGTGAGTCATCCTC+TGG | 0.511278 | 5_3:+39085965 | None:intergenic |
| TCTTTGCAACTGTAAATCAA+TGG | 0.515148 | 5_3:+39086291 | None:intergenic |
| GGTGATCAAGCGTCAATAGT+TGG | 0.522208 | 5_3:-39085549 | Msa0810550:CDS |
| TACATAAGTAGGAGGCATCA+AGG | 0.524518 | 5_3:+39085891 | None:intergenic |
| CCTTGTCTCGGTTAGTGCTA+AGG | 0.528899 | 5_3:-39085160 | Msa0810550:intron |
| TAGGAGGCATCAAGGATTTG+AGG | 0.530996 | 5_3:+39085899 | None:intergenic |
| AAAAGTGGAAGGAGGAAGAG+TGG | 0.533377 | 5_3:+39086071 | None:intergenic |
| ACATAATCTACAACTCATGA+AGG | 0.534004 | 5_3:-39085496 | Msa0810550:CDS |
| CTTCAAATGTTAAAGACCAA+TGG | 0.535334 | 5_3:-39086119 | Msa0810550:CDS |
| TTGTTTGGCAACCGTAGTTG+TGG | 0.536558 | 5_3:+39086220 | None:intergenic |
| ATTAATAATAGGTAGAAGAA+GGG | 0.541316 | 5_3:-39084389 | Msa0810550:intron |
| GTGAAGAGTGTGAATTCCAT+TGG | 0.541764 | 5_3:+39086103 | None:intergenic |
| CAACTACTGAACACAGTGGA+TGG | 0.542124 | 5_3:-39084363 | Msa0810550:CDS |
| AAGAAGAATCCCAATTTGAA+AGG | 0.545406 | 5_3:+39086145 | None:intergenic |
| CCATAATCAGTCACGTGGCA+TGG | 0.565688 | 5_3:-39085334 | Msa0810550:CDS |
| ACAAGGACAGGTTATGAAGA+TGG | 0.569307 | 5_3:-39085250 | Msa0810550:CDS |
| ACCCTTTGTACATAAGTAGG+AGG | 0.570239 | 5_3:+39085883 | None:intergenic |
| GTGACTGATTATGGTTGGTA+GGG | 0.576193 | 5_3:+39085343 | None:intergenic |
| TGCCTCCTACTTATGTACAA+AGG | 0.580082 | 5_3:-39085885 | Msa0810550:CDS |
| CAACAACCATAGCCCCTCCT+CGG | 0.583230 | 5_3:-39086038 | Msa0810550:CDS |
| GTTGAAACCACTCCAAGTGA+AGG | 0.604132 | 5_3:-39086252 | Msa0810550:CDS |
| GGGTAGCACGTGATGTTCTG+AGG | 0.605537 | 5_3:+39085363 | None:intergenic |
| AGGAGGGGCTATGGTTGTTG+TGG | 0.609496 | 5_3:+39086041 | None:intergenic |
| CCTTAGCACTAACCGAGACA+AGG | 0.614421 | 5_3:+39085160 | None:intergenic |
| GGATGATAATGTCCTTGTCT+CGG | 0.618077 | 5_3:-39085172 | Msa0810550:CDS |
| GGTGCACCCATAGAGTATTG+AGG | 0.621516 | 5_3:+39085384 | None:intergenic |
| GGATCTTGGAGCCACAACTA+CGG | 0.621648 | 5_3:-39086231 | Msa0810550:CDS |
| ACACCTTAATGTTTCCAGTG+TGG | 0.628319 | 5_3:-39085193 | Msa0810550:CDS |
| GTGGTGGATGCAAAAGTGGA+AGG | 0.632533 | 5_3:+39086060 | None:intergenic |
| AGGAGGAAATCGAGAGCCAG+AGG | 0.636953 | 5_3:-39085981 | Msa0810550:CDS |
| CATAATCTACAACTCATGAA+GGG | 0.646610 | 5_3:-39085495 | Msa0810550:CDS |
| GCTATCACGTAGAATTCAGG+TGG | 0.646782 | 5_3:-39084319 | Msa0810550:CDS |
| AAGGACATTATCATCCACAC+TGG | 0.650900 | 5_3:+39085179 | None:intergenic |
| GCCACGTGACTGATTATGGT+TGG | 0.656195 | 5_3:+39085338 | None:intergenic |
| GATCAAGCGTCAATAGTTGG+CGG | 0.662112 | 5_3:-39085546 | Msa0810550:CDS |
| GTGGATGCAAAAGTGGAAGG+AGG | 0.667144 | 5_3:+39086063 | None:intergenic |
| ACCAACCATAATCAGTCACG+TGG | 0.705729 | 5_3:-39085339 | Msa0810550:CDS |
| TCAAGGATTTGAGGACATCG+AGG | 0.738437 | 5_3:+39085908 | None:intergenic |
| GTGTCAACTACTGAACACAG+TGG | 0.768612 | 5_3:-39084367 | Msa0810550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAAAATTTTGATTTTTTT+TGG | + | chr5_3:39085023-39085042 | None:intergenic | 10.0% |
| !! | TATAATTTAAACAAGTAATA+AGG | + | chr5_3:39086141-39086160 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTTTTGACAAA+AGG | - | chr5_3:39086191-39086210 | Msa0810550:CDS | 10.0% |
| !! | TATATATTGGAATTAATAAT+AGG | - | chr5_3:39086223-39086242 | Msa0810550:CDS | 10.0% |
| !!! | TTGAAAATTTTGATTTTTTT+TGG | + | chr5_3:39085023-39085042 | None:intergenic | 10.0% |
| !! | TATAATTTAAACAAGTAATA+AGG | + | chr5_3:39086141-39086160 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTTTTGACAAA+AGG | - | chr5_3:39086191-39086210 | Msa0810550:CDS | 10.0% |
| !! | TATATATTGGAATTAATAAT+AGG | - | chr5_3:39086223-39086242 | Msa0810550:CDS | 10.0% |
| !! | AAGGTTACTAATTTATATAT+TGG | - | chr5_3:39086210-39086229 | Msa0810550:CDS | 15.0% |
| !! | AAGGTTACTAATTTATATAT+TGG | - | chr5_3:39086210-39086229 | Msa0810550:CDS | 15.0% |
| !!! | TGTGTTATAAAATTGTTGTT+GGG | + | chr5_3:39084967-39084986 | None:intergenic | 20.0% |
| !! | ATGTGTTATAAAATTGTTGT+TGG | + | chr5_3:39084968-39084987 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTGAGAAAATTGT+TGG | + | chr5_3:39085677-39085696 | None:intergenic | 20.0% |
| !!! | TATTTATGAAGTTTTCACTA+CGG | + | chr5_3:39085714-39085733 | None:intergenic | 20.0% |
| !! | AACTTCATAAATATACTATG+TGG | - | chr5_3:39085721-39085740 | Msa0810550:intron | 20.0% |
| !!! | GAAAATAGTGAAAAACATTT+TGG | - | chr5_3:39086163-39086182 | Msa0810550:CDS | 20.0% |
| !! | AATTAATAATAGGTAGAAGA+AGG | - | chr5_3:39086233-39086252 | Msa0810550:CDS | 20.0% |
| !! | ATTAATAATAGGTAGAAGAA+GGG | - | chr5_3:39086234-39086253 | Msa0810550:CDS | 20.0% |
| !!! | TGTGTTATAAAATTGTTGTT+GGG | + | chr5_3:39084967-39084986 | None:intergenic | 20.0% |
| !! | ATGTGTTATAAAATTGTTGT+TGG | + | chr5_3:39084968-39084987 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTGAGAAAATTGT+TGG | + | chr5_3:39085677-39085696 | None:intergenic | 20.0% |
| !!! | TATTTATGAAGTTTTCACTA+CGG | + | chr5_3:39085714-39085733 | None:intergenic | 20.0% |
| !! | AACTTCATAAATATACTATG+TGG | - | chr5_3:39085721-39085740 | Msa0810550:intron | 20.0% |
| !!! | GAAAATAGTGAAAAACATTT+TGG | - | chr5_3:39086163-39086182 | Msa0810550:CDS | 20.0% |
| !! | AATTAATAATAGGTAGAAGA+AGG | - | chr5_3:39086233-39086252 | Msa0810550:CDS | 20.0% |
| !! | ATTAATAATAGGTAGAAGAA+GGG | - | chr5_3:39086234-39086253 | Msa0810550:CDS | 20.0% |
| ! | ATCACAATATCCTTTCAAAT+TGG | - | chr5_3:39084468-39084487 | Msa0810550:intron | 25.0% |
| ! | TCACAATATCCTTTCAAATT+GGG | - | chr5_3:39084469-39084488 | Msa0810550:intron | 25.0% |
| ! | TGTTTCATAAACACAATTGT+TGG | - | chr5_3:39084818-39084837 | Msa0810550:intron | 25.0% |
| !! | GTGTTATAAAATTGTTGTTG+GGG | + | chr5_3:39084966-39084985 | None:intergenic | 25.0% |
| ! | TAAACCACATGTAGAATTTA+GGG | + | chr5_3:39085046-39085065 | None:intergenic | 25.0% |
| ! | TTAAACCACATGTAGAATTT+AGG | + | chr5_3:39085047-39085066 | None:intergenic | 25.0% |
| ! | TACATGTGGTTTAAAAAACA+GGG | - | chr5_3:39085053-39085072 | Msa0810550:intron | 25.0% |
| ! | AACATGAAAAACTCAGTAAA+AGG | + | chr5_3:39085218-39085237 | None:intergenic | 25.0% |
| ! | ATAATGTTGAAAAAACGACA+AGG | - | chr5_3:39085356-39085375 | Msa0810550:CDS | 25.0% |
| ! | TATAAAATTCACTGTCAACA+AGG | - | chr5_3:39085541-39085560 | Msa0810550:CDS | 25.0% |
| ! | ATAAAATTCACTGTCAACAA+GGG | - | chr5_3:39085542-39085561 | Msa0810550:CDS | 25.0% |
| ! | AATCAAGTGATAAAAAGACT+TGG | - | chr5_3:39085568-39085587 | Msa0810550:intron | 25.0% |
| ! | AAATTCAATACTATGCCATT+TGG | - | chr5_3:39085775-39085794 | Msa0810550:intron | 25.0% |
| !!! | ATCTACTTTAAAATCACAGA+TGG | + | chr5_3:39085933-39085952 | None:intergenic | 25.0% |
| ! | ATAAGGTTTAAAAATTGACG+TGG | + | chr5_3:39086124-39086143 | None:intergenic | 25.0% |
| ! | ATCACAATATCCTTTCAAAT+TGG | - | chr5_3:39084468-39084487 | Msa0810550:intron | 25.0% |
| ! | TCACAATATCCTTTCAAATT+GGG | - | chr5_3:39084469-39084488 | Msa0810550:intron | 25.0% |
| ! | TGTTTCATAAACACAATTGT+TGG | - | chr5_3:39084818-39084837 | Msa0810550:intron | 25.0% |
| !! | GTGTTATAAAATTGTTGTTG+GGG | + | chr5_3:39084966-39084985 | None:intergenic | 25.0% |
| ! | TAAACCACATGTAGAATTTA+GGG | + | chr5_3:39085046-39085065 | None:intergenic | 25.0% |
| ! | TTAAACCACATGTAGAATTT+AGG | + | chr5_3:39085047-39085066 | None:intergenic | 25.0% |
| ! | TACATGTGGTTTAAAAAACA+GGG | - | chr5_3:39085053-39085072 | Msa0810550:intron | 25.0% |
| ! | AACATGAAAAACTCAGTAAA+AGG | + | chr5_3:39085218-39085237 | None:intergenic | 25.0% |
| ! | ATAATGTTGAAAAAACGACA+AGG | - | chr5_3:39085356-39085375 | Msa0810550:CDS | 25.0% |
| ! | TATAAAATTCACTGTCAACA+AGG | - | chr5_3:39085541-39085560 | Msa0810550:CDS | 25.0% |
| ! | ATAAAATTCACTGTCAACAA+GGG | - | chr5_3:39085542-39085561 | Msa0810550:CDS | 25.0% |
| ! | AATCAAGTGATAAAAAGACT+TGG | - | chr5_3:39085568-39085587 | Msa0810550:intron | 25.0% |
| ! | AAATTCAATACTATGCCATT+TGG | - | chr5_3:39085775-39085794 | Msa0810550:intron | 25.0% |
| !!! | ATCTACTTTAAAATCACAGA+TGG | + | chr5_3:39085933-39085952 | None:intergenic | 25.0% |
| ! | ATAAGGTTTAAAAATTGACG+TGG | + | chr5_3:39086124-39086143 | None:intergenic | 25.0% |
| CTGTAAATCAATGGATATTG+TGG | + | chr5_3:39084326-39084345 | None:intergenic | 30.0% | |
| TCTTTGCAACTGTAAATCAA+TGG | + | chr5_3:39084335-39084354 | None:intergenic | 30.0% | |
| ! | GATCTTCTTCATCTTTTGTT+TGG | + | chr5_3:39084421-39084440 | None:intergenic | 30.0% |
| AAGAAGAATCCCAATTTGAA+AGG | + | chr5_3:39084481-39084500 | None:intergenic | 30.0% | |
| !! | CATTGGTCTTTAACATTTGA+AGG | + | chr5_3:39084506-39084525 | None:intergenic | 30.0% |
| CTTCAAATGTTAAAGACCAA+TGG | - | chr5_3:39084504-39084523 | Msa0810550:intron | 30.0% | |
| ATTACCCTTTGTACATAAGT+AGG | + | chr5_3:39084746-39084765 | None:intergenic | 30.0% | |
| CTACATGTGGTTTAAAAAAC+AGG | - | chr5_3:39085052-39085071 | Msa0810550:intron | 30.0% | |
| ACATAATCTACAACTCATGA+AGG | - | chr5_3:39085127-39085146 | Msa0810550:intron | 30.0% | |
| CATAATCTACAACTCATGAA+GGG | - | chr5_3:39085128-39085147 | Msa0810550:intron | 30.0% | |
| ATGAAAAACTCAGTAAAAGG+TGG | + | chr5_3:39085215-39085234 | None:intergenic | 30.0% | |
| ATGTTTCCTCAATACTCTAT+GGG | - | chr5_3:39085233-39085252 | Msa0810550:CDS | 30.0% | |
| CTCGTTAAATAAATGATGAG+TGG | - | chr5_3:39085592-39085611 | Msa0810550:intron | 30.0% | |
| TAGAGAAATATTCGATTGAG+AGG | - | chr5_3:39085634-39085653 | Msa0810550:intron | 30.0% | |
| AGAGAAATATTCGATTGAGA+GGG | - | chr5_3:39085635-39085654 | Msa0810550:intron | 30.0% | |
| CTGTAAATCAATGGATATTG+TGG | + | chr5_3:39084326-39084345 | None:intergenic | 30.0% | |
| TCTTTGCAACTGTAAATCAA+TGG | + | chr5_3:39084335-39084354 | None:intergenic | 30.0% | |
| ! | GATCTTCTTCATCTTTTGTT+TGG | + | chr5_3:39084421-39084440 | None:intergenic | 30.0% |
| AAGAAGAATCCCAATTTGAA+AGG | + | chr5_3:39084481-39084500 | None:intergenic | 30.0% | |
| !! | CATTGGTCTTTAACATTTGA+AGG | + | chr5_3:39084506-39084525 | None:intergenic | 30.0% |
| CTTCAAATGTTAAAGACCAA+TGG | - | chr5_3:39084504-39084523 | Msa0810550:intron | 30.0% | |
| ATTACCCTTTGTACATAAGT+AGG | + | chr5_3:39084746-39084765 | None:intergenic | 30.0% | |
| CTACATGTGGTTTAAAAAAC+AGG | - | chr5_3:39085052-39085071 | Msa0810550:intron | 30.0% | |
| ACATAATCTACAACTCATGA+AGG | - | chr5_3:39085127-39085146 | Msa0810550:intron | 30.0% | |
| CATAATCTACAACTCATGAA+GGG | - | chr5_3:39085128-39085147 | Msa0810550:intron | 30.0% | |
| ATGAAAAACTCAGTAAAAGG+TGG | + | chr5_3:39085215-39085234 | None:intergenic | 30.0% | |
| ATGTTTCCTCAATACTCTAT+GGG | - | chr5_3:39085233-39085252 | Msa0810550:CDS | 30.0% | |
| CTCGTTAAATAAATGATGAG+TGG | - | chr5_3:39085592-39085611 | Msa0810550:intron | 30.0% | |
| TAGAGAAATATTCGATTGAG+AGG | - | chr5_3:39085634-39085653 | Msa0810550:intron | 30.0% | |
| AGAGAAATATTCGATTGAGA+GGG | - | chr5_3:39085635-39085654 | Msa0810550:intron | 30.0% | |
| TGGAAAAACTATAGCCTCTA+AGG | + | chr5_3:39084306-39084325 | None:intergenic | 35.0% | |
| !!! | CCTCAATTTTTAGTCGATGT+GGG | + | chr5_3:39084867-39084886 | None:intergenic | 35.0% |
| !!! | TCCTCAATTTTTAGTCGATG+TGG | + | chr5_3:39084868-39084887 | None:intergenic | 35.0% |
| ! | CTTTGATGCCTTATGGTTTT+GGG | - | chr5_3:39084890-39084909 | Msa0810550:intron | 35.0% |
| TCAACCCTAAATTCTACATG+TGG | - | chr5_3:39085039-39085058 | Msa0810550:intron | 35.0% | |
| CATGTTTCCTCAATACTCTA+TGG | - | chr5_3:39085232-39085251 | Msa0810550:CDS | 35.0% | |
| AGGTTATGAAGATGGTTGTT+GGG | - | chr5_3:39085381-39085400 | Msa0810550:CDS | 35.0% | |
| GTTGTTGGGATTCAAAATCT+TGG | - | chr5_3:39085395-39085414 | Msa0810550:CDS | 35.0% | |
| GAGAAATATTCGATTGAGAG+GGG | - | chr5_3:39085636-39085655 | Msa0810550:intron | 35.0% | |
| AAAATTGTTGGAGACATGGT+AGG | + | chr5_3:39085665-39085684 | None:intergenic | 35.0% | |
| TGAGAAAATTGTTGGAGACA+TGG | + | chr5_3:39085669-39085688 | None:intergenic | 35.0% | |
| CTCGCGTAATATTTACCAAA+TGG | + | chr5_3:39085793-39085812 | None:intergenic | 35.0% | |
| !! | ATTTGCTGTTTGCATCATGA+CGG | - | chr5_3:39086041-39086060 | Msa0810550:CDS | 35.0% |
| AACAGAGAATAAGGTGAACT+AGG | - | chr5_3:39086074-39086093 | Msa0810550:CDS | 35.0% | |
| ACAGAGAATAAGGTGAACTA+GGG | - | chr5_3:39086075-39086094 | Msa0810550:CDS | 35.0% | |
| ! | AAAAATTGACGTGGAGGTTT+TGG | + | chr5_3:39086115-39086134 | None:intergenic | 35.0% |
| AGGTTTAAAAATTGACGTGG+AGG | + | chr5_3:39086121-39086140 | None:intergenic | 35.0% | |
| TGGAAAAACTATAGCCTCTA+AGG | + | chr5_3:39084306-39084325 | None:intergenic | 35.0% | |
| !!! | CCTCAATTTTTAGTCGATGT+GGG | + | chr5_3:39084867-39084886 | None:intergenic | 35.0% |
| !!! | TCCTCAATTTTTAGTCGATG+TGG | + | chr5_3:39084868-39084887 | None:intergenic | 35.0% |
| ! | CTTTGATGCCTTATGGTTTT+GGG | - | chr5_3:39084890-39084909 | Msa0810550:intron | 35.0% |
| TCAACCCTAAATTCTACATG+TGG | - | chr5_3:39085039-39085058 | Msa0810550:intron | 35.0% | |
| CATGTTTCCTCAATACTCTA+TGG | - | chr5_3:39085232-39085251 | Msa0810550:CDS | 35.0% | |
| AGGTTATGAAGATGGTTGTT+GGG | - | chr5_3:39085381-39085400 | Msa0810550:CDS | 35.0% | |
| GTTGTTGGGATTCAAAATCT+TGG | - | chr5_3:39085395-39085414 | Msa0810550:CDS | 35.0% | |
| GAGAAATATTCGATTGAGAG+GGG | - | chr5_3:39085636-39085655 | Msa0810550:intron | 35.0% | |
| AAAATTGTTGGAGACATGGT+AGG | + | chr5_3:39085665-39085684 | None:intergenic | 35.0% | |
| TGAGAAAATTGTTGGAGACA+TGG | + | chr5_3:39085669-39085688 | None:intergenic | 35.0% | |
| CTCGCGTAATATTTACCAAA+TGG | + | chr5_3:39085793-39085812 | None:intergenic | 35.0% | |
| !! | ATTTGCTGTTTGCATCATGA+CGG | - | chr5_3:39086041-39086060 | Msa0810550:CDS | 35.0% |
| AACAGAGAATAAGGTGAACT+AGG | - | chr5_3:39086074-39086093 | Msa0810550:CDS | 35.0% | |
| ACAGAGAATAAGGTGAACTA+GGG | - | chr5_3:39086075-39086094 | Msa0810550:CDS | 35.0% | |
| ! | AAAAATTGACGTGGAGGTTT+TGG | + | chr5_3:39086115-39086134 | None:intergenic | 35.0% |
| AGGTTTAAAAATTGACGTGG+AGG | + | chr5_3:39086121-39086140 | None:intergenic | 35.0% | |
| ACTTGGAGTGGTTTCAACTA+AGG | + | chr5_3:39084369-39084388 | None:intergenic | 40.0% | |
| ! | GTGAAGAGTGTGAATTCCAT+TGG | + | chr5_3:39084523-39084542 | None:intergenic | 40.0% |
| TGTGAATGCAAAAAACGAGG+AGG | - | chr5_3:39084625-39084644 | Msa0810550:intron | 40.0% | |
| !! | TACATAAGTAGGAGGCATCA+AGG | + | chr5_3:39084735-39084754 | None:intergenic | 40.0% |
| TGCCTCCTACTTATGTACAA+AGG | - | chr5_3:39084738-39084757 | Msa0810550:intron | 40.0% | |
| GCCTCCTACTTATGTACAAA+GGG | - | chr5_3:39084739-39084758 | Msa0810550:intron | 40.0% | |
| ACCCTTTGTACATAAGTAGG+AGG | + | chr5_3:39084743-39084762 | None:intergenic | 40.0% | |
| ! | CCCACATCGACTAAAAATTG+AGG | - | chr5_3:39084864-39084883 | Msa0810550:intron | 40.0% |
| ! | GCTTTGATGCCTTATGGTTT+TGG | - | chr5_3:39084889-39084908 | Msa0810550:intron | 40.0% |
| ! | TCCTAGACTTTTAACGCATC+CGG | - | chr5_3:39084928-39084947 | Msa0810550:intron | 40.0% |
| ! | AAATTGTTGTTGGGGAGTCT+GGG | + | chr5_3:39084958-39084977 | None:intergenic | 40.0% |
| ! | AAAATTGTTGTTGGGGAGTC+TGG | + | chr5_3:39084959-39084978 | None:intergenic | 40.0% |
| CGGTGCAATTAACTTCTTGA+AGG | - | chr5_3:39085097-39085116 | Msa0810550:intron | 40.0% | |
| ! | GTGACTGATTATGGTTGGTA+GGG | + | chr5_3:39085283-39085302 | None:intergenic | 40.0% |
| GGCAGATATAGAAGTGACTT+TGG | - | chr5_3:39085310-39085329 | Msa0810550:CDS | 40.0% | |
| GTTGAAAAAACGACAAGGAC+AGG | - | chr5_3:39085361-39085380 | Msa0810550:CDS | 40.0% | |
| ACAAGGACAGGTTATGAAGA+TGG | - | chr5_3:39085373-39085392 | Msa0810550:CDS | 40.0% | |
| CAGGTTATGAAGATGGTTGT+TGG | - | chr5_3:39085380-39085399 | Msa0810550:CDS | 40.0% | |
| ACACCTTAATGTTTCCAGTG+TGG | - | chr5_3:39085430-39085449 | Msa0810550:CDS | 40.0% | |
| CATCCACACTGGAAACATTA+AGG | + | chr5_3:39085436-39085455 | None:intergenic | 40.0% | |
| AAGGACATTATCATCCACAC+TGG | + | chr5_3:39085447-39085466 | None:intergenic | 40.0% | |
| ! | GGATGATAATGTCCTTGTCT+CGG | - | chr5_3:39085451-39085470 | Msa0810550:CDS | 40.0% |
| CGGTTAGTGCTAAGGTAAAT+TGG | - | chr5_3:39085471-39085490 | Msa0810550:CDS | 40.0% | |
| CGCGTACTTAACAGAGAATA+AGG | - | chr5_3:39086065-39086084 | Msa0810550:CDS | 40.0% | |
| TGAGCTATCACGTAGAATTC+AGG | - | chr5_3:39086301-39086320 | Msa0810550:CDS | 40.0% | |
| ACTTGGAGTGGTTTCAACTA+AGG | + | chr5_3:39084369-39084388 | None:intergenic | 40.0% | |
| ! | GTGAAGAGTGTGAATTCCAT+TGG | + | chr5_3:39084523-39084542 | None:intergenic | 40.0% |
| TGTGAATGCAAAAAACGAGG+AGG | - | chr5_3:39084625-39084644 | Msa0810550:intron | 40.0% | |
| !! | TACATAAGTAGGAGGCATCA+AGG | + | chr5_3:39084735-39084754 | None:intergenic | 40.0% |
| TGCCTCCTACTTATGTACAA+AGG | - | chr5_3:39084738-39084757 | Msa0810550:intron | 40.0% | |
| GCCTCCTACTTATGTACAAA+GGG | - | chr5_3:39084739-39084758 | Msa0810550:intron | 40.0% | |
| ACCCTTTGTACATAAGTAGG+AGG | + | chr5_3:39084743-39084762 | None:intergenic | 40.0% | |
| ! | CCCACATCGACTAAAAATTG+AGG | - | chr5_3:39084864-39084883 | Msa0810550:intron | 40.0% |
| ! | GCTTTGATGCCTTATGGTTT+TGG | - | chr5_3:39084889-39084908 | Msa0810550:intron | 40.0% |
| ! | TCCTAGACTTTTAACGCATC+CGG | - | chr5_3:39084928-39084947 | Msa0810550:intron | 40.0% |
| ! | AAATTGTTGTTGGGGAGTCT+GGG | + | chr5_3:39084958-39084977 | None:intergenic | 40.0% |
| ! | AAAATTGTTGTTGGGGAGTC+TGG | + | chr5_3:39084959-39084978 | None:intergenic | 40.0% |
| CGGTGCAATTAACTTCTTGA+AGG | - | chr5_3:39085097-39085116 | Msa0810550:intron | 40.0% | |
| ! | GTGACTGATTATGGTTGGTA+GGG | + | chr5_3:39085283-39085302 | None:intergenic | 40.0% |
| GGCAGATATAGAAGTGACTT+TGG | - | chr5_3:39085310-39085329 | Msa0810550:CDS | 40.0% | |
| GTTGAAAAAACGACAAGGAC+AGG | - | chr5_3:39085361-39085380 | Msa0810550:CDS | 40.0% | |
| ACAAGGACAGGTTATGAAGA+TGG | - | chr5_3:39085373-39085392 | Msa0810550:CDS | 40.0% | |
| CAGGTTATGAAGATGGTTGT+TGG | - | chr5_3:39085380-39085399 | Msa0810550:CDS | 40.0% | |
| ACACCTTAATGTTTCCAGTG+TGG | - | chr5_3:39085430-39085449 | Msa0810550:CDS | 40.0% | |
| CATCCACACTGGAAACATTA+AGG | + | chr5_3:39085436-39085455 | None:intergenic | 40.0% | |
| AAGGACATTATCATCCACAC+TGG | + | chr5_3:39085447-39085466 | None:intergenic | 40.0% | |
| ! | GGATGATAATGTCCTTGTCT+CGG | - | chr5_3:39085451-39085470 | Msa0810550:CDS | 40.0% |
| CGGTTAGTGCTAAGGTAAAT+TGG | - | chr5_3:39085471-39085490 | Msa0810550:CDS | 40.0% | |
| CGCGTACTTAACAGAGAATA+AGG | - | chr5_3:39086065-39086084 | Msa0810550:CDS | 40.0% | |
| TGAGCTATCACGTAGAATTC+AGG | - | chr5_3:39086301-39086320 | Msa0810550:CDS | 40.0% | |
| GTTGAAACCACTCCAAGTGA+AGG | - | chr5_3:39084371-39084390 | Msa0810550:CDS | 45.0% | |
| TTGTTTGGCAACCGTAGTTG+TGG | + | chr5_3:39084406-39084425 | None:intergenic | 45.0% | |
| AAAAGTGGAAGGAGGAAGAG+TGG | + | chr5_3:39084555-39084574 | None:intergenic | 45.0% | |
| !! | TGTTGTGGTGGATGCAAAAG+TGG | + | chr5_3:39084570-39084589 | None:intergenic | 45.0% |
| CGCTGTGAATGCAAAAAACG+AGG | - | chr5_3:39084622-39084641 | Msa0810550:intron | 45.0% | |
| TCAAGGATTTGAGGACATCG+AGG | + | chr5_3:39084718-39084737 | None:intergenic | 45.0% | |
| !! | TAGGAGGCATCAAGGATTTG+AGG | + | chr5_3:39084727-39084746 | None:intergenic | 45.0% |
| ! | GAGGAAGCTTTGATGCCTTA+TGG | - | chr5_3:39084883-39084902 | Msa0810550:intron | 45.0% |
| CACTCGTACCCAAAACCATA+AGG | + | chr5_3:39084901-39084920 | None:intergenic | 45.0% | |
| !!! | TATGGTTTTGGGTACGAGTG+TGG | - | chr5_3:39084901-39084920 | Msa0810550:intron | 45.0% |
| ! | CCTAGACTTTTAACGCATCC+GGG | - | chr5_3:39084929-39084948 | Msa0810550:intron | 45.0% |
| ! | AATTGTTGTTGGGGAGTCTG+GGG | + | chr5_3:39084957-39084976 | None:intergenic | 45.0% |
| GGTGATCAAGCGTCAATAGT+TGG | - | chr5_3:39085074-39085093 | Msa0810550:intron | 45.0% | |
| GATCAAGCGTCAATAGTTGG+CGG | - | chr5_3:39085077-39085096 | Msa0810550:intron | 45.0% | |
| CGTGACTGATTATGGTTGGT+AGG | + | chr5_3:39085284-39085303 | None:intergenic | 45.0% | |
| ACCAACCATAATCAGTCACG+TGG | - | chr5_3:39085284-39085303 | Msa0810550:CDS | 45.0% | |
| GTGTCAACTACTGAACACAG+TGG | - | chr5_3:39086256-39086275 | Msa0810550:CDS | 45.0% | |
| CAACTACTGAACACAGTGGA+TGG | - | chr5_3:39086260-39086279 | Msa0810550:CDS | 45.0% | |
| GCTATCACGTAGAATTCAGG+TGG | - | chr5_3:39086304-39086323 | Msa0810550:CDS | 45.0% | |
| GTTGAAACCACTCCAAGTGA+AGG | - | chr5_3:39084371-39084390 | Msa0810550:CDS | 45.0% | |
| TTGTTTGGCAACCGTAGTTG+TGG | + | chr5_3:39084406-39084425 | None:intergenic | 45.0% | |
| AAAAGTGGAAGGAGGAAGAG+TGG | + | chr5_3:39084555-39084574 | None:intergenic | 45.0% | |
| !! | TGTTGTGGTGGATGCAAAAG+TGG | + | chr5_3:39084570-39084589 | None:intergenic | 45.0% |
| CGCTGTGAATGCAAAAAACG+AGG | - | chr5_3:39084622-39084641 | Msa0810550:intron | 45.0% | |
| TCAAGGATTTGAGGACATCG+AGG | + | chr5_3:39084718-39084737 | None:intergenic | 45.0% | |
| !! | TAGGAGGCATCAAGGATTTG+AGG | + | chr5_3:39084727-39084746 | None:intergenic | 45.0% |
| ! | GAGGAAGCTTTGATGCCTTA+TGG | - | chr5_3:39084883-39084902 | Msa0810550:intron | 45.0% |
| CACTCGTACCCAAAACCATA+AGG | + | chr5_3:39084901-39084920 | None:intergenic | 45.0% | |
| !!! | TATGGTTTTGGGTACGAGTG+TGG | - | chr5_3:39084901-39084920 | Msa0810550:intron | 45.0% |
| ! | CCTAGACTTTTAACGCATCC+GGG | - | chr5_3:39084929-39084948 | Msa0810550:intron | 45.0% |
| ! | AATTGTTGTTGGGGAGTCTG+GGG | + | chr5_3:39084957-39084976 | None:intergenic | 45.0% |
| GGTGATCAAGCGTCAATAGT+TGG | - | chr5_3:39085074-39085093 | Msa0810550:intron | 45.0% | |
| GATCAAGCGTCAATAGTTGG+CGG | - | chr5_3:39085077-39085096 | Msa0810550:intron | 45.0% | |
| CGTGACTGATTATGGTTGGT+AGG | + | chr5_3:39085284-39085303 | None:intergenic | 45.0% | |
| ACCAACCATAATCAGTCACG+TGG | - | chr5_3:39085284-39085303 | Msa0810550:CDS | 45.0% | |
| GTGTCAACTACTGAACACAG+TGG | - | chr5_3:39086256-39086275 | Msa0810550:CDS | 45.0% | |
| CAACTACTGAACACAGTGGA+TGG | - | chr5_3:39086260-39086279 | Msa0810550:CDS | 45.0% | |
| GCTATCACGTAGAATTCAGG+TGG | - | chr5_3:39086304-39086323 | Msa0810550:CDS | 45.0% | |
| CCAAGATCCTTCACTTGGAG+TGG | + | chr5_3:39084381-39084400 | None:intergenic | 50.0% | |
| CCACTCCAAGTGAAGGATCT+TGG | - | chr5_3:39084378-39084397 | Msa0810550:CDS | 50.0% | |
| TGGCTCCAAGATCCTTCACT+TGG | + | chr5_3:39084386-39084405 | None:intergenic | 50.0% | |
| GGATCTTGGAGCCACAACTA+CGG | - | chr5_3:39084392-39084411 | Msa0810550:intron | 50.0% | |
| GGAGGAAGAGTGGAAGTTTC+AGG | + | chr5_3:39084545-39084564 | None:intergenic | 50.0% | |
| GTGGATGCAAAAGTGGAAGG+AGG | + | chr5_3:39084563-39084582 | None:intergenic | 50.0% | |
| !! | GTGGTGGATGCAAAAGTGGA+AGG | + | chr5_3:39084566-39084585 | None:intergenic | 50.0% |
| CTGCAATGTGAGTCATCCTC+TGG | + | chr5_3:39084661-39084680 | None:intergenic | 50.0% | |
| CCCGGATGCGTTAAAAGTCT+AGG | + | chr5_3:39084932-39084951 | None:intergenic | 50.0% | |
| !! | GGTGCACCCATAGAGTATTG+AGG | + | chr5_3:39085242-39085261 | None:intergenic | 50.0% |
| GCCACGTGACTGATTATGGT+TGG | + | chr5_3:39085288-39085307 | None:intergenic | 50.0% | |
| CCATGCCACGTGACTGATTA+TGG | + | chr5_3:39085292-39085311 | None:intergenic | 50.0% | |
| CCATAATCAGTCACGTGGCA+TGG | - | chr5_3:39085289-39085308 | Msa0810550:CDS | 50.0% | |
| CCTTAGCACTAACCGAGACA+AGG | + | chr5_3:39085466-39085485 | None:intergenic | 50.0% | |
| CCTTGTCTCGGTTAGTGCTA+AGG | - | chr5_3:39085463-39085482 | Msa0810550:CDS | 50.0% | |
| CCAAGATCCTTCACTTGGAG+TGG | + | chr5_3:39084381-39084400 | None:intergenic | 50.0% | |
| CCACTCCAAGTGAAGGATCT+TGG | - | chr5_3:39084378-39084397 | Msa0810550:CDS | 50.0% | |
| TGGCTCCAAGATCCTTCACT+TGG | + | chr5_3:39084386-39084405 | None:intergenic | 50.0% | |
| GGATCTTGGAGCCACAACTA+CGG | - | chr5_3:39084392-39084411 | Msa0810550:intron | 50.0% | |
| GGAGGAAGAGTGGAAGTTTC+AGG | + | chr5_3:39084545-39084564 | None:intergenic | 50.0% | |
| GTGGATGCAAAAGTGGAAGG+AGG | + | chr5_3:39084563-39084582 | None:intergenic | 50.0% | |
| !! | GTGGTGGATGCAAAAGTGGA+AGG | + | chr5_3:39084566-39084585 | None:intergenic | 50.0% |
| CTGCAATGTGAGTCATCCTC+TGG | + | chr5_3:39084661-39084680 | None:intergenic | 50.0% | |
| CCCGGATGCGTTAAAAGTCT+AGG | + | chr5_3:39084932-39084951 | None:intergenic | 50.0% | |
| !! | GGTGCACCCATAGAGTATTG+AGG | + | chr5_3:39085242-39085261 | None:intergenic | 50.0% |
| GCCACGTGACTGATTATGGT+TGG | + | chr5_3:39085288-39085307 | None:intergenic | 50.0% | |
| CCATGCCACGTGACTGATTA+TGG | + | chr5_3:39085292-39085311 | None:intergenic | 50.0% | |
| CCATAATCAGTCACGTGGCA+TGG | - | chr5_3:39085289-39085308 | Msa0810550:CDS | 50.0% | |
| CCTTAGCACTAACCGAGACA+AGG | + | chr5_3:39085466-39085485 | None:intergenic | 50.0% | |
| CCTTGTCTCGGTTAGTGCTA+AGG | - | chr5_3:39085463-39085482 | Msa0810550:CDS | 50.0% | |
| AGGGGCTATGGTTGTTGTGG+TGG | + | chr5_3:39084582-39084601 | None:intergenic | 55.0% | |
| AGGAGGGGCTATGGTTGTTG+TGG | + | chr5_3:39084585-39084604 | None:intergenic | 55.0% | |
| CAACAACCATAGCCCCTCCT+CGG | - | chr5_3:39084585-39084604 | Msa0810550:intron | 55.0% | |
| ! | TTTTCTCCGAGGAGGGGCTA+TGG | + | chr5_3:39084594-39084613 | None:intergenic | 55.0% |
| !! | TCGTCGTTTTCTCCGAGGAG+GGG | + | chr5_3:39084600-39084619 | None:intergenic | 55.0% |
| !! | GTCGTCGTTTTCTCCGAGGA+GGG | + | chr5_3:39084601-39084620 | None:intergenic | 55.0% |
| AGGAGGAAATCGAGAGCCAG+AGG | - | chr5_3:39084642-39084661 | Msa0810550:intron | 55.0% | |
| GGGTAGCACGTGATGTTCTG+AGG | + | chr5_3:39085263-39085282 | None:intergenic | 55.0% | |
| AGGGGCTATGGTTGTTGTGG+TGG | + | chr5_3:39084582-39084601 | None:intergenic | 55.0% | |
| AGGAGGGGCTATGGTTGTTG+TGG | + | chr5_3:39084585-39084604 | None:intergenic | 55.0% | |
| CAACAACCATAGCCCCTCCT+CGG | - | chr5_3:39084585-39084604 | Msa0810550:intron | 55.0% | |
| ! | TTTTCTCCGAGGAGGGGCTA+TGG | + | chr5_3:39084594-39084613 | None:intergenic | 55.0% |
| !! | TCGTCGTTTTCTCCGAGGAG+GGG | + | chr5_3:39084600-39084619 | None:intergenic | 55.0% |
| !! | GTCGTCGTTTTCTCCGAGGA+GGG | + | chr5_3:39084601-39084620 | None:intergenic | 55.0% |
| AGGAGGAAATCGAGAGCCAG+AGG | - | chr5_3:39084642-39084661 | Msa0810550:intron | 55.0% | |
| GGGTAGCACGTGATGTTCTG+AGG | + | chr5_3:39085263-39085282 | None:intergenic | 55.0% | |
| !! | CGTCGTCGTTTTCTCCGAGG+AGG | + | chr5_3:39084602-39084621 | None:intergenic | 60.0% |
| !! | CGTCGTCGTTTTCTCCGAGG+AGG | + | chr5_3:39084602-39084621 | None:intergenic | 60.0% |
| !! | GCGCGTCGTCGTTTTCTCCG+AGG | + | chr5_3:39084605-39084624 | None:intergenic | 65.0% |
| !! | GCGCGTCGTCGTTTTCTCCG+AGG | + | chr5_3:39084605-39084624 | None:intergenic | 65.0% |
| GTTGGGGAGTCTGGGGAGCC+CGG | + | chr5_3:39084950-39084969 | None:intergenic | 70.0% | |
| GTTGGGGAGTCTGGGGAGCC+CGG | + | chr5_3:39084950-39084969 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 39084299 | 39086346 | 39084299 | ID=Msa0810550;Name=Msa0810550 |
| chr5_3 | mRNA | 39084299 | 39086346 | 39084299 | ID=Msa0810550-mRNA-1;Parent=Msa0810550;Name=Msa0810550-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|0.66|1|1|3|0|324 |
| chr5_3 | exon | 39085885 | 39086346 | 39085885 | ID=Msa0810550-mRNA-1:exon:11866;Parent=Msa0810550-mRNA-1 |
| chr5_3 | exon | 39085161 | 39085571 | 39085161 | ID=Msa0810550-mRNA-1:exon:11865;Parent=Msa0810550-mRNA-1 |
| chr5_3 | exon | 39084299 | 39084400 | 39084299 | ID=Msa0810550-mRNA-1:exon:11864;Parent=Msa0810550-mRNA-1 |
| chr5_3 | CDS | 39085885 | 39086346 | 39085885 | ID=Msa0810550-mRNA-1:cds;Parent=Msa0810550-mRNA-1 |
| chr5_3 | CDS | 39085161 | 39085571 | 39085161 | ID=Msa0810550-mRNA-1:cds;Parent=Msa0810550-mRNA-1 |
| chr5_3 | CDS | 39084299 | 39084400 | 39084299 | ID=Msa0810550-mRNA-1:cds;Parent=Msa0810550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
