Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810910 | G7KBI8 | 94.054 | 185 | 10 | 1 | 1 | 184 | 1 | 185 | 1.41e-99 | 295 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0120330 | Msa0810910 | -0.801594 | 8.365960e-49 | -8.615850e-47 |
| Msa0810910 | Msa0844530 | -0.805736 | 1.156075e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810910 | MtrunA17_Chr5g0427261 | 94.054 | 185 | 10 | 1 | 1 | 184 | 1 | 185 | 3.12e-103 | 296 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810910 | AT5G49710.3 | 60.656 | 183 | 65 | 3 | 7 | 182 | 13 | 195 | 1.70e-68 | 209 |
| Msa0810910 | AT5G49710.1 | 60.109 | 183 | 65 | 4 | 7 | 182 | 13 | 194 | 6.78e-66 | 202 |
| Msa0810910 | AT4G24590.1 | 54.891 | 184 | 77 | 2 | 7 | 184 | 20 | 203 | 9.72e-60 | 187 |
| Msa0810910 | AT4G24590.4 | 53.439 | 189 | 77 | 3 | 7 | 184 | 20 | 208 | 1.73e-57 | 181 |
| Msa0810910 | AT5G49710.2 | 56.790 | 162 | 63 | 3 | 7 | 161 | 13 | 174 | 2.67e-53 | 169 |
| Msa0810910 | AT4G24590.5 | 50.610 | 164 | 75 | 2 | 7 | 164 | 20 | 183 | 2.88e-45 | 148 |
| Msa0810910 | AT4G24590.2 | 50.667 | 150 | 68 | 2 | 7 | 150 | 20 | 169 | 6.30e-40 | 134 |
| Msa0810910 | AT4G24590.3 | 50.667 | 150 | 68 | 2 | 7 | 150 | 20 | 169 | 6.30e-40 | 134 |
Find 80 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGAAATTCTTTGAATT+TGG | 0.184215 | 5_3:+39815935 | Msa0810910:three_prime_UTR |
| GGATGGAATTGCATGCTTTA+TGG | 0.225852 | 5_3:+39811556 | Msa0810910:CDS |
| TAATTAACGTGTTTGGGATT+TGG | 0.231756 | 5_3:-39810532 | None:intergenic |
| AATTAACGTGTTTGGGATTT+GGG | 0.249069 | 5_3:-39810531 | None:intergenic |
| GGATTAACCTGATCGGCTTC+TGG | 0.251487 | 5_3:-39810772 | None:intergenic |
| GAGAAGATGAAGAACAAATA+TGG | 0.260484 | 5_3:-39816106 | None:intergenic |
| CTCTTGACCCGAACCGGGTT+TGG | 0.268656 | 5_3:-39810607 | None:intergenic |
| GAATCAATAATTAACGTGTT+TGG | 0.268710 | 5_3:-39810539 | None:intergenic |
| GTGACTTGTTAATTCTGATT+TGG | 0.299502 | 5_3:-39810407 | None:intergenic |
| AATCAATAATTAACGTGTTT+GGG | 0.302257 | 5_3:-39810538 | None:intergenic |
| TATAGCTTCCATTCCTCTTC+CGG | 0.312168 | 5_3:-39810575 | None:intergenic |
| AGAAGGTAATTCTTGGGATT+TGG | 0.316183 | 5_3:+39811454 | Msa0810910:CDS |
| GTTGCAGCCCTTAGGATAAC+AGG | 0.317438 | 5_3:-39815772 | None:intergenic |
| TGGTCAGTGAAAATGATCTT+TGG | 0.322257 | 5_3:+39811474 | Msa0810910:CDS |
| TCACCATCCTGGAGTTGATT+TGG | 0.325062 | 5_3:-39814859 | None:intergenic |
| TCTGGATCGGGAGGTGTAGA+AGG | 0.333294 | 5_3:-39810754 | None:intergenic |
| GGGCTGCAACTAAAGCATTC+TGG | 0.364903 | 5_3:+39815785 | Msa0810910:exon |
| TTATCCAATCAGATGGCAAC+AGG | 0.366108 | 5_3:-39815960 | None:intergenic |
| TTGCAGAAGAAGGTAATTCT+TGG | 0.368780 | 5_3:+39811447 | Msa0810910:intron |
| ACTGTTCCAATACGGTTTGC+AGG | 0.370818 | 5_3:-39810636 | None:intergenic |
| ACCTGATCGGCTTCTGGATC+GGG | 0.391887 | 5_3:-39810766 | None:intergenic |
| GGTCAGTGAAAATGATCTTT+GGG | 0.392740 | 5_3:+39811475 | Msa0810910:CDS |
| TTGCCGATCCAAACCCGGTT+CGG | 0.393946 | 5_3:+39810599 | Msa0810910:CDS |
| AAACAATGTGAGGCGAGTTC+CGG | 0.399772 | 5_3:+39815861 | Msa0810910:three_prime_UTR |
| TGCCGATCCAAACCCGGTTC+GGG | 0.402721 | 5_3:+39810600 | Msa0810910:CDS |
| TTTACAGGGGAGGGGTAAAC+CGG | 0.408817 | 5_3:-39815880 | None:intergenic |
| TCTAACTTGTCAAGGAAATC+AGG | 0.414186 | 5_3:-39811301 | None:intergenic |
| CTTCCATTCCTCTTCCGGTT+CGG | 0.416054 | 5_3:-39810570 | None:intergenic |
| ATTCCTCTTCCGGTTCGGTT+CGG | 0.420687 | 5_3:-39810565 | None:intergenic |
| TGATTCTCTCCGAACCGAAC+CGG | 0.422128 | 5_3:+39810556 | Msa0810910:five_prime_UTR |
| ATGTTGTCGCGTGAGTGTTT+TGG | 0.438106 | 5_3:-39810383 | None:intergenic |
| TCTCCGAACCGAACCGGAAG+AGG | 0.445337 | 5_3:+39810562 | Msa0810910:five_prime_UTR |
| GAAGAAGAAGAAGATGAAAA+GGG | 0.446931 | 5_3:-39810501 | None:intergenic |
| AGAATTTCATATTACACGGT+TGG | 0.453530 | 5_3:-39815925 | None:intergenic |
| GGACCCTGTTGCCATCTGAT+TGG | 0.453613 | 5_3:+39815956 | Msa0810910:three_prime_UTR |
| TGCAGAAGAAGGTAATTCTT+GGG | 0.456011 | 5_3:+39811448 | Msa0810910:intron |
| TCCCGATCCAGAAGCCGATC+AGG | 0.460640 | 5_3:+39810765 | Msa0810910:CDS |
| AGGGGAAGCTTCGAAAGGCC+TGG | 0.464151 | 5_3:+39815073 | Msa0810910:CDS |
| AAGCGTTGTTGATGAGTTCA+AGG | 0.469386 | 5_3:-39810669 | None:intergenic |
| ATCAAAACCCTGTTATCCTA+AGG | 0.475876 | 5_3:+39815764 | Msa0810910:CDS |
| AGCTTCGAAAGGCCTGGGAT+GGG | 0.476263 | 5_3:+39815079 | Msa0810910:CDS |
| AGAAGATGAAGAACAAATAT+GGG | 0.476619 | 5_3:-39816105 | None:intergenic |
| TTCATCATCATCGTCGTCAT+CGG | 0.480739 | 5_3:-39810695 | None:intergenic |
| ATGAAAAGGGGAAAGGTAAG+AGG | 0.482096 | 5_3:-39810488 | None:intergenic |
| AGCAGCCAGACTCACCATCC+TGG | 0.488141 | 5_3:-39814870 | None:intergenic |
| AAGCTTCGAAAGGCCTGGGA+TGG | 0.490928 | 5_3:+39815078 | Msa0810910:CDS |
| GAACCGAACCGGAAGAGGAA+TGG | 0.491286 | 5_3:+39810567 | Msa0810910:exon |
| GTGTAGAAGGGAGAGATTGT+TGG | 0.492306 | 5_3:-39810741 | None:intergenic |
| ATGCTTTAGTTGCAGCCCTT+AGG | 0.507499 | 5_3:-39815780 | None:intergenic |
| TGTTAGACAAGATGATATAG+TGG | 0.508853 | 5_3:+39811535 | Msa0810910:CDS |
| AACCTGATCGGCTTCTGGAT+CGG | 0.518267 | 5_3:-39810767 | None:intergenic |
| TATAACTTTGCTCCCATCCC+AGG | 0.519243 | 5_3:-39815091 | None:intergenic |
| GACCCGAACCGGGTTTGGAT+CGG | 0.521496 | 5_3:-39810602 | None:intergenic |
| GGGGAAGCTTCGAAAGGCCT+GGG | 0.522509 | 5_3:+39815074 | Msa0810910:CDS |
| TCTTTGACACTGTTCCAATA+CGG | 0.526313 | 5_3:-39810644 | None:intergenic |
| CTGTTCCAATACGGTTTGCA+GGG | 0.526869 | 5_3:-39810635 | None:intergenic |
| TCGGTTTATCAGAACACAAC+CGG | 0.529456 | 5_3:+39811337 | Msa0810910:CDS |
| TCAAAACCCTGTTATCCTAA+GGG | 0.542723 | 5_3:+39815765 | Msa0810910:CDS |
| GAAGAAGATGAAAAGGGGAA+AGG | 0.544589 | 5_3:-39810495 | None:intergenic |
| TCTGATTTGTCAATGCAGCT+TGG | 0.562168 | 5_3:+39815836 | Msa0810910:three_prime_UTR |
| AGAAGGGAGAGATTGTTGGT+TGG | 0.565291 | 5_3:-39810737 | None:intergenic |
| AAGAAGAAGAAGATGAAAAG+GGG | 0.567123 | 5_3:-39810500 | None:intergenic |
| TTGGGAAGATGTTGACACTT+CGG | 0.573392 | 5_3:+39811493 | Msa0810910:CDS |
| AGACAAGATGATATAGTGGA+TGG | 0.579473 | 5_3:+39811539 | Msa0810910:CDS |
| TGAAATTGGATTAACCTGAT+CGG | 0.580725 | 5_3:-39810779 | None:intergenic |
| TTTGACTCCAAATCAACTCC+AGG | 0.587991 | 5_3:+39814852 | Msa0810910:CDS |
| TCAAAGAATTTCATATTACA+CGG | 0.598373 | 5_3:-39815929 | None:intergenic |
| GTTAGAGTGTGCACAGGCGT+CGG | 0.606007 | 5_3:+39811318 | Msa0810910:CDS |
| GTGCACACTCTAACTTGTCA+AGG | 0.608480 | 5_3:-39811309 | None:intergenic |
| TATAATTGCCGATCCAAACC+CGG | 0.609116 | 5_3:+39810594 | Msa0810910:CDS |
| CTGGATCGGGAGGTGTAGAA+GGG | 0.610181 | 5_3:-39810753 | None:intergenic |
| TGTATAATCATTTATACACA+TGG | 0.614270 | 5_3:-39816028 | None:intergenic |
| TGATCGGCTTCTGGATCGGG+AGG | 0.618272 | 5_3:-39810763 | None:intergenic |
| AGCGTTGTTGATGAGTTCAA+GGG | 0.618346 | 5_3:-39810668 | None:intergenic |
| TGACAAGTTAGAGTGTGCAC+AGG | 0.625766 | 5_3:+39811312 | Msa0810910:CDS |
| TTGCAGCCCTTAGGATAACA+GGG | 0.635455 | 5_3:-39815771 | None:intergenic |
| GTTGTCCCTTAAGAAAACCA+AGG | 0.637185 | 5_3:+39811589 | Msa0810910:CDS |
| TATCCAATCAGATGGCAACA+GGG | 0.660516 | 5_3:-39815959 | None:intergenic |
| ACTCCAAATCAACTCCAGGA+TGG | 0.670728 | 5_3:+39814856 | Msa0810910:CDS |
| CAGCTTGGAGAAACAATGTG+AGG | 0.704131 | 5_3:+39815851 | Msa0810910:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAATTCAACTTAATT+AGG | + | chr5_3:39810823-39810842 | Msa0810910:intron | 10.0% |
| !! | AATTAAATTCAACTTAATTA+GGG | + | chr5_3:39810824-39810843 | Msa0810910:intron | 10.0% |
| !!! | TTTTTAATAATATTCAACAA+AGG | - | chr5_3:39811938-39811957 | None:intergenic | 10.0% |
| !! | TAAAAATAAGTAAATATTCT+TGG | - | chr5_3:39813701-39813720 | None:intergenic | 10.0% |
| !! | ATTATAAAAGGAATTATAAA+AGG | - | chr5_3:39815183-39815202 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTACAG+GGG | - | chr5_3:39815896-39815915 | None:intergenic | 10.0% |
| !! | AGAGAATTAAAAAATGAAAT+TGG | - | chr5_3:39810796-39810815 | None:intergenic | 15.0% |
| !! | TAATTTATTGACAAAATTTC+TGG | + | chr5_3:39810854-39810873 | Msa0810910:intron | 15.0% |
| !! | AAACTACTAAAATCTTTAAT+TGG | + | chr5_3:39811955-39811974 | Msa0810910:intron | 15.0% |
| !! | TTATGTCAATTAGATTAAAT+AGG | + | chr5_3:39812475-39812494 | Msa0810910:intron | 15.0% |
| !! | TATGTCAATTAGATTAAATA+GGG | + | chr5_3:39812476-39812495 | Msa0810910:intron | 15.0% |
| !!! | TGTTCCTTATTTAATTTAAT+GGG | + | chr5_3:39813137-39813156 | Msa0810910:intron | 15.0% |
| !! | TAACATATAAAGAATTAGTT+GGG | - | chr5_3:39814511-39814530 | None:intergenic | 15.0% |
| !! | TAAATAAAATGTTGAAGAAT+GGG | - | chr5_3:39814567-39814586 | None:intergenic | 15.0% |
| !! | AAAAATTTATCTGGATAAAA+AGG | - | chr5_3:39814928-39814947 | None:intergenic | 15.0% |
| !!! | ATAATTCCTTTTATAATTTC+TGG | + | chr5_3:39815186-39815205 | Msa0810910:intron | 15.0% |
| !! | CTTCAAAAAATAAAATAAAG+GGG | - | chr5_3:39815693-39815712 | None:intergenic | 15.0% |
| !! | CCTTCAAAAAATAAAATAAA+GGG | - | chr5_3:39815694-39815713 | None:intergenic | 15.0% |
| !! | TCCTTCAAAAAATAAAATAA+AGG | - | chr5_3:39815695-39815714 | None:intergenic | 15.0% |
| !! | AAATGAAAGTAACAAATAAA+GGG | - | chr5_3:39815725-39815744 | None:intergenic | 15.0% |
| !! | AAAATGAAAGTAACAAATAA+AGG | - | chr5_3:39815726-39815745 | None:intergenic | 15.0% |
| !! | AATATGAAATTCTTTGAATT+TGG | + | chr5_3:39815935-39815954 | Msa0810910:three_prime_UTR | 15.0% |
| !! | AATCAATAATTAACGTGTTT+GGG | - | chr5_3:39810541-39810560 | None:intergenic | 20.0% |
| !! | TGACTTAGTACTATTAATTA+CGG | + | chr5_3:39810991-39811010 | Msa0810910:intron | 20.0% |
| !!! | TGCTTAAAAAGCATATATAA+AGG | - | chr5_3:39811864-39811883 | None:intergenic | 20.0% |
| !!! | TTAAATGCTTTTTGTTTCTT+TGG | + | chr5_3:39811903-39811922 | Msa0810910:intron | 20.0% |
| !! | CTAAAAAAGTAAAGCAAAAA+AGG | - | chr5_3:39812047-39812066 | None:intergenic | 20.0% |
| !! | TATTCCTTTATAACAAACAT+GGG | - | chr5_3:39812302-39812321 | None:intergenic | 20.0% |
| !!! | GTGTTCCTTATTTAATTTAA+TGG | + | chr5_3:39813136-39813155 | Msa0810910:intron | 20.0% |
| !! | TATGCCCATTAAATTAAATA+AGG | - | chr5_3:39813144-39813163 | None:intergenic | 20.0% |
| !! | CCAAAATATACTAACATATT+TGG | - | chr5_3:39813369-39813388 | None:intergenic | 20.0% |
| !!! | CCAAATATGTTAGTATATTT+TGG | + | chr5_3:39813366-39813385 | Msa0810910:intron | 20.0% |
| !!! | AATTTTAGAAAAATATACCC+AGG | + | chr5_3:39813723-39813742 | Msa0810910:intron | 20.0% |
| !! | TCAATAACATAATGGTAATA+GGG | - | chr5_3:39814089-39814108 | None:intergenic | 20.0% |
| !! | TTAACAATTTAACTCTATCT+TGG | - | chr5_3:39814186-39814205 | None:intergenic | 20.0% |
| !! | GTAACATATAAAGAATTAGT+TGG | - | chr5_3:39814512-39814531 | None:intergenic | 20.0% |
| !! | CTAAATAAAATGTTGAAGAA+TGG | - | chr5_3:39814568-39814587 | None:intergenic | 20.0% |
| !! | CAAGAATAAGATATCATATT+AGG | - | chr5_3:39814901-39814920 | None:intergenic | 20.0% |
| !! | CTAATATGATATCTTATTCT+TGG | + | chr5_3:39814899-39814918 | Msa0810910:intron | 20.0% |
| !!! | ATTTTCTGTGAAAAAGAAAA+AGG | + | chr5_3:39815053-39815072 | Msa0810910:CDS | 20.0% |
| !!! | TTTTCTGTGAAAAAGAAAAA+GGG | + | chr5_3:39815054-39815073 | Msa0810910:CDS | 20.0% |
| !! | TTATATATAATGTTGCATCA+TGG | + | chr5_3:39815109-39815128 | Msa0810910:intron | 20.0% |
| !! | TATATATAATGTTGCATCAT+GGG | + | chr5_3:39815110-39815129 | Msa0810910:intron | 20.0% |
| !! | TATATAGCAAACACATATTA+TGG | + | chr5_3:39815155-39815174 | Msa0810910:intron | 20.0% |
| !! | ATATAGCAAACACATATTAT+GGG | + | chr5_3:39815156-39815175 | Msa0810910:intron | 20.0% |
| !! | ATGAATAAGTATAATTGTTG+AGG | - | chr5_3:39815291-39815310 | None:intergenic | 20.0% |
| !! | AAGTACAATAATAGAATCTA+GGG | - | chr5_3:39815607-39815626 | None:intergenic | 20.0% |
| !! | AAAGTACAATAATAGAATCT+AGG | - | chr5_3:39815608-39815627 | None:intergenic | 20.0% |
| !!! | ACTTGTTAAGGAATTATAAA+AGG | - | chr5_3:39815659-39815678 | None:intergenic | 20.0% |
| !!! | CCCTTTATTTTATTTTTTGA+AGG | + | chr5_3:39815691-39815710 | Msa0810910:intron | 20.0% |
| !! | AATGAAAGTAACAAATAAAG+GGG | - | chr5_3:39815724-39815743 | None:intergenic | 20.0% |
| !!! | TTTCATTTTTCATTCTTAAC+AGG | + | chr5_3:39815737-39815756 | Msa0810910:intron | 20.0% |
| !! | TCAAAGAATTTCATATTACA+CGG | - | chr5_3:39815932-39815951 | None:intergenic | 20.0% |
| !! | TGTATAATCATTTATACACA+TGG | - | chr5_3:39816031-39816050 | None:intergenic | 20.0% |
| ! | GAATCAATAATTAACGTGTT+TGG | - | chr5_3:39810542-39810561 | None:intergenic | 25.0% |
| ! | TGAACAGATTAATACGAAAA+AGG | - | chr5_3:39810950-39810969 | None:intergenic | 25.0% |
| ! | GACTTAGTACTATTAATTAC+GGG | + | chr5_3:39810992-39811011 | Msa0810910:intron | 25.0% |
| ! | TGAAATTGAGCTTGTATTTA+AGG | + | chr5_3:39811027-39811046 | Msa0810910:intron | 25.0% |
| !!! | TATATGCTTTTTAAGCAACT+TGG | + | chr5_3:39811867-39811886 | Msa0810910:intron | 25.0% |
| !! | TAAAATCTTTAATTGGTGTC+AGG | + | chr5_3:39811962-39811981 | Msa0810910:intron | 25.0% |
| ! | TATTCTTGAATTGCAATTGA+TGG | + | chr5_3:39812007-39812026 | Msa0810910:intron | 25.0% |
| !!! | TGCTTTACTTTTTTAGTGTT+TGG | + | chr5_3:39812051-39812070 | Msa0810910:intron | 25.0% |
| !! | AAATCGATGCTGTTTATTTA+TGG | + | chr5_3:39812111-39812130 | Msa0810910:intron | 25.0% |
| ! | ATAACTATTCTATTCATGTC+AGG | - | chr5_3:39812188-39812207 | None:intergenic | 25.0% |
| ! | TATAATGCACTATTCATTGT+TGG | + | chr5_3:39812207-39812226 | Msa0810910:intron | 25.0% |
| ! | AATATTCCTAGGAATAAGTT+TGG | - | chr5_3:39812260-39812279 | None:intergenic | 25.0% |
| ! | TTATTCCTAGGAATATTAGA+TGG | + | chr5_3:39812263-39812282 | Msa0810910:intron | 25.0% |
| ! | TATTCCTAGGAATATTAGAT+GGG | + | chr5_3:39812264-39812283 | Msa0810910:intron | 25.0% |
| !!! | AATACCCATGTTTGTTATAA+AGG | + | chr5_3:39812295-39812314 | Msa0810910:intron | 25.0% |
| ! | CTATTCCTTTATAACAAACA+TGG | - | chr5_3:39812303-39812322 | None:intergenic | 25.0% |
| !!! | CAAAGTTCCAAGTTTTATAT+GGG | - | chr5_3:39812968-39812987 | None:intergenic | 25.0% |
| !!! | TCAAAGTTCCAAGTTTTATA+TGG | - | chr5_3:39812969-39812988 | None:intergenic | 25.0% |
| ! | CGTTTATTAATTTCCTGTAT+TGG | - | chr5_3:39813402-39813421 | None:intergenic | 25.0% |
| !!! | CTCTAAAGCAAAAGTTTTTT+TGG | - | chr5_3:39813449-39813468 | None:intergenic | 25.0% |
| ! | CAGATACAAAAGAATAAGTA+CGG | - | chr5_3:39813613-39813632 | None:intergenic | 25.0% |
| ! | TAATCTTTCAAAAAGCTGTT+TGG | - | chr5_3:39813764-39813783 | None:intergenic | 25.0% |
| ! | AATTTCTTTCATTACATTCC+CGG | + | chr5_3:39813794-39813813 | Msa0810910:intron | 25.0% |
| !! | ATAAGTTTCCAGTTTAACTT+AGG | - | chr5_3:39813867-39813886 | None:intergenic | 25.0% |
| !!! | AAATATGTCCATTTTGAAGA+TGG | + | chr5_3:39813926-39813945 | Msa0810910:intron | 25.0% |
| ! | AAACAATACCATCTTCAAAA+TGG | - | chr5_3:39813937-39813956 | None:intergenic | 25.0% |
| ! | TTGAATATCAGGAAAAACAT+TGG | + | chr5_3:39813955-39813974 | Msa0810910:intron | 25.0% |
| ! | CTCAATAACATAATGGTAAT+AGG | - | chr5_3:39814090-39814109 | None:intergenic | 25.0% |
| ! | CTATTACCATTATGTTATTG+AGG | + | chr5_3:39814088-39814107 | Msa0810910:intron | 25.0% |
| ! | TTACTCATTGTTGTATGAAT+GGG | + | chr5_3:39814528-39814547 | Msa0810910:intron | 25.0% |
| ! | ACAGAAAAGAAACACATTAT+AGG | - | chr5_3:39814687-39814706 | None:intergenic | 25.0% |
| ! | TTGCTAGTTAGATAAAAGAT+TGG | + | chr5_3:39814976-39814995 | Msa0810910:intron | 25.0% |
| ! | TGCTAGTTAGATAAAAGATT+GGG | + | chr5_3:39814977-39814996 | Msa0810910:intron | 25.0% |
| ! | TTTCTGTGAAAAAGAAAAAG+GGG | + | chr5_3:39815055-39815074 | Msa0810910:CDS | 25.0% |
| ! | ATATATAATGTTGCATCATG+GGG | + | chr5_3:39815111-39815130 | Msa0810910:intron | 25.0% |
| ! | AATAAGTATAATTGTTGAGG+CGG | - | chr5_3:39815288-39815307 | None:intergenic | 25.0% |
| !!! | ACTGTTTTATTTTATCCCTT+GGG | - | chr5_3:39815579-39815598 | None:intergenic | 25.0% |
| ! | TATAAAAGGAATCATTGTCT+TGG | - | chr5_3:39815645-39815664 | None:intergenic | 25.0% |
| ! | ATAAAATAAAGGGGAATGTT+GGG | - | chr5_3:39815684-39815703 | None:intergenic | 25.0% |
| ! | AATAAAATAAAGGGGAATGT+TGG | - | chr5_3:39815685-39815704 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTACAGGGGA+GGG | - | chr5_3:39815892-39815911 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTACAGGGG+AGG | - | chr5_3:39815893-39815912 | None:intergenic | 25.0% |
| !! | GTGACTTGTTAATTCTGATT+TGG | - | chr5_3:39810410-39810429 | None:intergenic | 30.0% |
| AAGAAGAAGAAGATGAAAAG+GGG | - | chr5_3:39810503-39810522 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGATGAAAA+GGG | - | chr5_3:39810504-39810523 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGATGAAA+AGG | - | chr5_3:39810505-39810524 | None:intergenic | 30.0% | |
| TTTCATCTTCTTCTTCTTCT+AGG | + | chr5_3:39810505-39810524 | Msa0810910:five_prime_UTR | 30.0% | |
| TTCATCTTCTTCTTCTTCTA+GGG | + | chr5_3:39810506-39810525 | Msa0810910:five_prime_UTR | 30.0% | |
| ! | AATTAACGTGTTTGGGATTT+GGG | - | chr5_3:39810534-39810553 | None:intergenic | 30.0% |
| ! | TAATTAACGTGTTTGGGATT+TGG | - | chr5_3:39810535-39810554 | None:intergenic | 30.0% |
| TGAAATTGGATTAACCTGAT+CGG | - | chr5_3:39810782-39810801 | None:intergenic | 30.0% | |
| TAGCATAATGAAAACACTAG+CGG | + | chr5_3:39811057-39811076 | Msa0810910:intron | 30.0% | |
| ! | AAAAGAACTTGCTTCATTGT+TGG | + | chr5_3:39811206-39811225 | Msa0810910:intron | 30.0% |
| TGTTAGACAAGATGATATAG+TGG | + | chr5_3:39811535-39811554 | Msa0810910:CDS | 30.0% | |
| !! | ACATACCTTGGTTTTCTTAA+GGG | - | chr5_3:39811597-39811616 | None:intergenic | 30.0% |
| !! | TACATACCTTGGTTTTCTTA+AGG | - | chr5_3:39811598-39811617 | None:intergenic | 30.0% |
| GATAACAACAATACATACCT+TGG | - | chr5_3:39811609-39811628 | None:intergenic | 30.0% | |
| !! | TTCTTTTGTTATAACGCTCA+AGG | + | chr5_3:39811635-39811654 | Msa0810910:intron | 30.0% |
| AACTTAGACAACCTTAGAAA+AGG | - | chr5_3:39811839-39811858 | None:intergenic | 30.0% | |
| TTTAAGCAACTTGGATTTGT+TGG | + | chr5_3:39811876-39811895 | Msa0810910:intron | 30.0% | |
| ! | TGAATTGCAATTGATGGATA+TGG | + | chr5_3:39812013-39812032 | Msa0810910:intron | 30.0% |
| ! | ACTATTCATTGTTGGTCTAA+GGG | + | chr5_3:39812215-39812234 | Msa0810910:intron | 30.0% |
| ! | TTTTCCCATCTAATATTCCT+AGG | - | chr5_3:39812271-39812290 | None:intergenic | 30.0% |
| ! | TTGTTGAATATGTGATTTGG+TGG | - | chr5_3:39812595-39812614 | None:intergenic | 30.0% |
| TGGTTGTTGAATATGTGATT+TGG | - | chr5_3:39812598-39812617 | None:intergenic | 30.0% | |
| TTGCAGAAGATAAGGAAATA+AGG | - | chr5_3:39812627-39812646 | None:intergenic | 30.0% | |
| CTTAAGAGACACAAATAAAG+TGG | - | chr5_3:39812683-39812702 | None:intergenic | 30.0% | |
| ! | ATAAGAGCATAAGAGGAAAT+GGG | - | chr5_3:39812876-39812895 | None:intergenic | 30.0% |
| ! | TATAAGAGCATAAGAGGAAA+TGG | - | chr5_3:39812877-39812896 | None:intergenic | 30.0% |
| ! | TGTGTTTATAAGAGCATAAG+AGG | - | chr5_3:39812883-39812902 | None:intergenic | 30.0% |
| TTCAACACCCATATAAAACT+TGG | + | chr5_3:39812958-39812977 | Msa0810910:intron | 30.0% | |
| ! | TTGCTGAATATGTGATTTTG+CGG | + | chr5_3:39813025-39813044 | Msa0810910:intron | 30.0% |
| ! | TAATATAGTGTTGAGAGAGT+AGG | + | chr5_3:39813105-39813124 | Msa0810910:intron | 30.0% |
| ! | ATAATCAACTTTTCCATGGT+GGG | + | chr5_3:39813161-39813180 | Msa0810910:intron | 30.0% |
| GAAGAAAACCATCATGTAAT+AGG | - | chr5_3:39813282-39813301 | None:intergenic | 30.0% | |
| ! | AACTATCGTATTTTGTGTGT+TGG | + | chr5_3:39813308-39813327 | Msa0810910:intron | 30.0% |
| !!! | TATTTTGTGTGTTGGTTTTG+AGG | + | chr5_3:39813316-39813335 | Msa0810910:intron | 30.0% |
| !!! | TATAGATGTAGAGGTGTTTT+AGG | + | chr5_3:39813638-39813657 | Msa0810910:intron | 30.0% |
| !! | GGTTGATAATTTAAACTCCT+GGG | - | chr5_3:39813743-39813762 | None:intergenic | 30.0% |
| !! | TGGTTGATAATTTAAACTCC+TGG | - | chr5_3:39813744-39813763 | None:intergenic | 30.0% |
| !! | CAGCTTTTTGAAAGATTACT+TGG | + | chr5_3:39813766-39813785 | Msa0810910:intron | 30.0% |
| ATTTCTTTCATTACATTCCC+GGG | + | chr5_3:39813795-39813814 | Msa0810910:intron | 30.0% | |
| TGGATGCAAAAATTATTCCT+AGG | - | chr5_3:39813830-39813849 | None:intergenic | 30.0% | |
| GACATATTTGTAGAGAAAAC+GGG | - | chr5_3:39813915-39813934 | None:intergenic | 30.0% | |
| GGACATATTTGTAGAGAAAA+CGG | - | chr5_3:39813916-39813935 | None:intergenic | 30.0% | |
| GATGGTATTGTTTGAATATC+AGG | + | chr5_3:39813944-39813963 | Msa0810910:intron | 30.0% | |
| CTTCTTCCTCAATAACATAA+TGG | - | chr5_3:39814097-39814116 | None:intergenic | 30.0% | |
| ! | TCATATGTTTGTCTTTTCCA+TGG | + | chr5_3:39814127-39814146 | Msa0810910:intron | 30.0% |
| AAGACTAGGGTTATTTGTTT+CGG | + | chr5_3:39814457-39814476 | Msa0810910:intron | 30.0% | |
| AAGAATTAGTTGGGCAAAAA+TGG | - | chr5_3:39814502-39814521 | None:intergenic | 30.0% | |
| GTTACTCATTGTTGTATGAA+TGG | + | chr5_3:39814527-39814546 | Msa0810910:intron | 30.0% | |
| TACTCATTGTTGTATGAATG+GGG | + | chr5_3:39814529-39814548 | Msa0810910:intron | 30.0% | |
| ! | GACCGTCATTATATTTCTAA+GGG | + | chr5_3:39815208-39815227 | Msa0810910:intron | 30.0% |
| AGCCCTTAGAAATATAATGA+CGG | - | chr5_3:39815213-39815232 | None:intergenic | 30.0% | |
| !!! | CACTGTTTTATTTTATCCCT+TGG | - | chr5_3:39815580-39815599 | None:intergenic | 30.0% |
| TAAAATAAAGGGGAATGTTG+GGG | - | chr5_3:39815683-39815702 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTTACAGGGGAG+GGG | - | chr5_3:39815891-39815910 | None:intergenic | 30.0% |
| AGAATTTCATATTACACGGT+TGG | - | chr5_3:39815928-39815947 | None:intergenic | 30.0% | |
| ! | AGTCTTTTTATCCAATCAGA+TGG | - | chr5_3:39815970-39815989 | None:intergenic | 30.0% |
| TCTTTGACACTGTTCCAATA+CGG | - | chr5_3:39810647-39810666 | None:intergenic | 35.0% | |
| ! | TCTAACTTGTCAAGGAAATC+AGG | - | chr5_3:39811304-39811323 | None:intergenic | 35.0% |
| CAAGATGATTGATTGCATAC+CGG | - | chr5_3:39811359-39811378 | None:intergenic | 35.0% | |
| TTGCAGAAGAAGGTAATTCT+TGG | + | chr5_3:39811447-39811466 | Msa0810910:intron | 35.0% | |
| TGCAGAAGAAGGTAATTCTT+GGG | + | chr5_3:39811448-39811467 | Msa0810910:intron | 35.0% | |
| AGAAGGTAATTCTTGGGATT+TGG | + | chr5_3:39811454-39811473 | Msa0810910:CDS | 35.0% | |
| TGGTCAGTGAAAATGATCTT+TGG | + | chr5_3:39811474-39811493 | Msa0810910:CDS | 35.0% | |
| GGTCAGTGAAAATGATCTTT+GGG | + | chr5_3:39811475-39811494 | Msa0810910:CDS | 35.0% | |
| ! | AGACAAGATGATATAGTGGA+TGG | + | chr5_3:39811539-39811558 | Msa0810910:CDS | 35.0% |
| CACAAATCTACCATATACTC+AGG | - | chr5_3:39811671-39811690 | None:intergenic | 35.0% | |
| CTGAGTATATGGTAGATTTG+TGG | + | chr5_3:39811669-39811688 | Msa0810910:intron | 35.0% | |
| ATGAATTAAGATTTCCGCGT+TGG | - | chr5_3:39811726-39811745 | None:intergenic | 35.0% | |
| TTGAGCTGTAAATTCCACAT+GGG | + | chr5_3:39811755-39811774 | Msa0810910:intron | 35.0% | |
| TTCCACATGGGAAATAATTC+TGG | + | chr5_3:39811767-39811786 | Msa0810910:intron | 35.0% | |
| TCCACATGGGAAATAATTCT+GGG | + | chr5_3:39811768-39811787 | Msa0810910:intron | 35.0% | |
| !! | ACAGTTTAGCTTTGTGTTAG+TGG | + | chr5_3:39812088-39812107 | Msa0810910:intron | 35.0% |
| ! | TCGATGCTGTTTATTTATGG+TGG | + | chr5_3:39812114-39812133 | Msa0810910:intron | 35.0% |
| ! | CACTATTCATTGTTGGTCTA+AGG | + | chr5_3:39812214-39812233 | Msa0810910:intron | 35.0% |
| GAGATTCCAAACTTATTCCT+AGG | + | chr5_3:39812251-39812270 | Msa0810910:intron | 35.0% | |
| AGGAATAGACAATTATTCCC+AGG | + | chr5_3:39812315-39812334 | Msa0810910:intron | 35.0% | |
| TGTGGGAGTAAAAAGTTTGT+GGG | - | chr5_3:39812352-39812371 | None:intergenic | 35.0% | |
| TTGTGGGAGTAAAAAGTTTG+TGG | - | chr5_3:39812353-39812372 | None:intergenic | 35.0% | |
| !! | AATGAAAAGACTGGCTTTGT+GGG | - | chr5_3:39812369-39812388 | None:intergenic | 35.0% |
| !! | AAATGAAAAGACTGGCTTTG+TGG | - | chr5_3:39812370-39812389 | None:intergenic | 35.0% |
| ATGAAATGTTCCCATGTTGT+TGG | - | chr5_3:39812398-39812417 | None:intergenic | 35.0% | |
| ATAATCAACTTTCCCATGGT+GGG | - | chr5_3:39812459-39812478 | None:intergenic | 35.0% | |
| TGACATAATCAACTTTCCCA+TGG | - | chr5_3:39812463-39812482 | None:intergenic | 35.0% | |
| ! | TAATCTAGTGTTGAGAGAGT+AGG | - | chr5_3:39812515-39812534 | None:intergenic | 35.0% |
| !! | TTGAATATGTGATTTGGTGG+TGG | - | chr5_3:39812592-39812611 | None:intergenic | 35.0% |
| AAGATAAGGAAATAAGGAGG+AGG | - | chr5_3:39812621-39812640 | None:intergenic | 35.0% | |
| CAGAAGATAAGGAAATAAGG+AGG | - | chr5_3:39812624-39812643 | None:intergenic | 35.0% | |
| AAATAAAGTGGTTGTGGCTA+TGG | - | chr5_3:39812671-39812690 | None:intergenic | 35.0% | |
| AGACACAAATAAAGTGGTTG+TGG | - | chr5_3:39812677-39812696 | None:intergenic | 35.0% | |
| ! | GGGAATTTGGTAATTGAGAT+GGG | - | chr5_3:39812847-39812866 | None:intergenic | 35.0% |
| TATGAGGACATGAAAGAGAA+AGG | + | chr5_3:39813062-39813081 | Msa0810910:intron | 35.0% | |
| ! | CATAATCAACTTTTCCATGG+TGG | + | chr5_3:39813160-39813179 | Msa0810910:intron | 35.0% |
| ATCATGTAATAGGCAGTTGA+GGG | - | chr5_3:39813272-39813291 | None:intergenic | 35.0% | |
| TGGTACACTAAATCCAATAC+AGG | + | chr5_3:39813386-39813405 | Msa0810910:intron | 35.0% | |
| TTTAGAGAGATTGCCATCAA+AGG | + | chr5_3:39813462-39813481 | Msa0810910:intron | 35.0% | |
| ACGGACTTACGATAATGTAA+TGG | - | chr5_3:39813594-39813613 | None:intergenic | 35.0% | |
| TCTGTTGCATATAGATGTAG+AGG | + | chr5_3:39813629-39813648 | Msa0810910:intron | 35.0% | |
| AAACACCTCCTAAGTTAAAC+TGG | + | chr5_3:39813856-39813875 | Msa0810910:intron | 35.0% | |
| ! | AGTTTCCAGTTTAACTTAGG+AGG | - | chr5_3:39813864-39813883 | None:intergenic | 35.0% |
| !! | CGCAGACAATCATCATTTTT+GGG | - | chr5_3:39814267-39814286 | None:intergenic | 35.0% |
| AACTAACTAGAGACGAGAAA+TGG | - | chr5_3:39814372-39814391 | None:intergenic | 35.0% | |
| ! | TATTTCTGCTGATGGAGAAA+GGG | + | chr5_3:39814429-39814448 | Msa0810910:intron | 35.0% |
| TATTTGTTTCGGTTGAGAGA+TGG | + | chr5_3:39814468-39814487 | Msa0810910:intron | 35.0% | |
| ATTTGTTTCGGTTGAGAGAT+GGG | + | chr5_3:39814469-39814488 | Msa0810910:intron | 35.0% | |
| CTTAAAACCACTTTCTTCAC+TGG | - | chr5_3:39814718-39814737 | None:intergenic | 35.0% | |
| GTCGAGCACAAAAATTTATC+TGG | - | chr5_3:39814937-39814956 | None:intergenic | 35.0% | |
| GACGGTCCAGAAATTATAAA+AGG | - | chr5_3:39815195-39815214 | None:intergenic | 35.0% | |
| ! | GGACCGTCATTATATTTCTA+AGG | + | chr5_3:39815207-39815226 | Msa0810910:intron | 35.0% |
| ! | TTTCTAGAAGCTTGTCAAGA+CGG | - | chr5_3:39815453-39815472 | None:intergenic | 35.0% |
| ATCAAAACCCTGTTATCCTA+AGG | + | chr5_3:39815764-39815783 | Msa0810910:CDS | 35.0% | |
| TCAAAACCCTGTTATCCTAA+GGG | + | chr5_3:39815765-39815784 | Msa0810910:CDS | 35.0% | |
| ATGAAAAGGGGAAAGGTAAG+AGG | - | chr5_3:39810491-39810510 | None:intergenic | 40.0% | |
| GAAGAAGATGAAAAGGGGAA+AGG | - | chr5_3:39810498-39810517 | None:intergenic | 40.0% | |
| TATAGCTTCCATTCCTCTTC+CGG | - | chr5_3:39810578-39810597 | None:intergenic | 40.0% | |
| TATAATTGCCGATCCAAACC+CGG | + | chr5_3:39810594-39810613 | Msa0810910:CDS | 40.0% | |
| AAAAACCCTGCAAACCGTAT+TGG | + | chr5_3:39810630-39810649 | Msa0810910:CDS | 40.0% | |
| ! | AGCGTTGTTGATGAGTTCAA+GGG | - | chr5_3:39810671-39810690 | None:intergenic | 40.0% |
| ! | AAGCGTTGTTGATGAGTTCA+AGG | - | chr5_3:39810672-39810691 | None:intergenic | 40.0% |
| TTCATCATCATCGTCGTCAT+CGG | - | chr5_3:39810698-39810717 | None:intergenic | 40.0% | |
| CAAGTCGATCAACAGAACAA+CGG | - | chr5_3:39811138-39811157 | None:intergenic | 40.0% | |
| TCGGTTTATCAGAACACAAC+CGG | + | chr5_3:39811337-39811356 | Msa0810910:CDS | 40.0% | |
| CGGTATGCAATCAATCATCT+TGG | + | chr5_3:39811357-39811376 | Msa0810910:intron | 40.0% | |
| ATCAATCATCTTGGAGCTCT+CGG | + | chr5_3:39811366-39811385 | Msa0810910:intron | 40.0% | |
| TTGGGAAGATGTTGACACTT+CGG | + | chr5_3:39811493-39811512 | Msa0810910:CDS | 40.0% | |
| GGATGGAATTGCATGCTTTA+TGG | + | chr5_3:39811556-39811575 | Msa0810910:CDS | 40.0% | |
| GTTGTCCCTTAAGAAAACCA+AGG | + | chr5_3:39811589-39811608 | Msa0810910:CDS | 40.0% | |
| ATCTACCATATACTCAGGCA+TGG | - | chr5_3:39811666-39811685 | None:intergenic | 40.0% | |
| GTTGAGCTGTAAATTCCACA+TGG | + | chr5_3:39811754-39811773 | Msa0810910:intron | 40.0% | |
| TCCCAGAATTATTTCCCATG+TGG | - | chr5_3:39811772-39811791 | None:intergenic | 40.0% | |
| ! | AATTCTGGGAGTTTCCTGAA+AGG | + | chr5_3:39811782-39811801 | Msa0810910:intron | 40.0% |
| GACAACCTTAGAAAAGGCTA+TGG | - | chr5_3:39811833-39811852 | None:intergenic | 40.0% | |
| !! | GTCTAAGGGAGTGTTTGTTT+GGG | + | chr5_3:39812229-39812248 | Msa0810910:intron | 40.0% |
| ! | TGTGGGTCTAGTTATTTCCT+GGG | - | chr5_3:39812335-39812354 | None:intergenic | 40.0% |
| ! | TTGTGGGTCTAGTTATTTCC+TGG | - | chr5_3:39812336-39812355 | None:intergenic | 40.0% |
| TGGCGAGTAAATGAAAAGAC+TGG | - | chr5_3:39812378-39812397 | None:intergenic | 40.0% | |
| TCATTTACTCGCCAACAACA+TGG | + | chr5_3:39812384-39812403 | Msa0810910:intron | 40.0% | |
| CATTTACTCGCCAACAACAT+GGG | + | chr5_3:39812385-39812404 | Msa0810910:intron | 40.0% | |
| CATAATCAACTTTCCCATGG+TGG | - | chr5_3:39812460-39812479 | None:intergenic | 40.0% | |
| !! | AATATGTGATTTGGTGGTGG+TGG | - | chr5_3:39812589-39812608 | None:intergenic | 40.0% |
| ATAAGGAAATAAGGAGGAGG+TGG | - | chr5_3:39812618-39812637 | None:intergenic | 40.0% | |
| GGTTGGAATTGCAGAAGATA+AGG | - | chr5_3:39812635-39812654 | None:intergenic | 40.0% | |
| ! | ATGGCAAATGATGGAATGGT+TGG | - | chr5_3:39812652-39812671 | None:intergenic | 40.0% |
| AGAGTGTGGAAATGAATGAG+AGG | - | chr5_3:39812822-39812841 | None:intergenic | 40.0% | |
| AATTGAGATGGGAAAGAGTG+TGG | - | chr5_3:39812836-39812855 | None:intergenic | 40.0% | |
| ! | CGGGAATTTGGTAATTGAGA+TGG | - | chr5_3:39812848-39812867 | None:intergenic | 40.0% |
| TGTTCATCTTCTATTCAGCG+TGG | + | chr5_3:39812914-39812933 | Msa0810910:intron | 40.0% | |
| ! | CTGAATATGTGATTTTGCGG+TGG | + | chr5_3:39813028-39813047 | Msa0810910:intron | 40.0% |
| ! | AATATGTGATTTTGCGGTGG+TGG | + | chr5_3:39813031-39813050 | Msa0810910:intron | 40.0% |
| AGGACATGAAAGAGAAAGGA+TGG | + | chr5_3:39813066-39813085 | Msa0810910:intron | 40.0% | |
| ! | GGGCATAATCAACTTTTCCA+TGG | + | chr5_3:39813157-39813176 | Msa0810910:intron | 40.0% |
| !!! | AGTGAAGTTTTTTCCCACCA+TGG | - | chr5_3:39813177-39813196 | None:intergenic | 40.0% |
| AATGAGGTGGCATTTAGCAT+GGG | - | chr5_3:39813202-39813221 | None:intergenic | 40.0% | |
| TCATGTAATAGGCAGTTGAG+GGG | - | chr5_3:39813271-39813290 | None:intergenic | 40.0% | |
| CATCATGTAATAGGCAGTTG+AGG | - | chr5_3:39813273-39813292 | None:intergenic | 40.0% | |
| CTCAACTGCCTATTACATGA+TGG | + | chr5_3:39813271-39813290 | Msa0810910:intron | 40.0% | |
| TTCAACGTTCAAGCCTTTGA+TGG | - | chr5_3:39813478-39813497 | None:intergenic | 40.0% | |
| TTTCATTACATTCCCGGGAA+AGG | + | chr5_3:39813800-39813819 | Msa0810910:intron | 40.0% | |
| ATTCCTAGGATTACCTTTCC+CGG | - | chr5_3:39813816-39813835 | None:intergenic | 40.0% | |
| !! | CTTAGGAGGTGTTTGTTTCA+TGG | - | chr5_3:39813850-39813869 | None:intergenic | 40.0% |
| AACACGAAACCATAGAGGAA+GGG | - | chr5_3:39814018-39814037 | None:intergenic | 40.0% | |
| TAACACGAAACCATAGAGGA+AGG | - | chr5_3:39814019-39814038 | None:intergenic | 40.0% | |
| !! | TTACAGCTCCTGGTCTTTTT+CGG | + | chr5_3:39814036-39814055 | Msa0810910:intron | 40.0% |
| TTATATCCCCGAAAAAGACC+AGG | - | chr5_3:39814047-39814066 | None:intergenic | 40.0% | |
| TTCCATGGTATGATGTCTGT+AGG | + | chr5_3:39814142-39814161 | Msa0810910:intron | 40.0% | |
| AGACAGACAGATATCTCTCA+GGG | - | chr5_3:39814235-39814254 | None:intergenic | 40.0% | |
| ! | GCGCAGACAATCATCATTTT+TGG | - | chr5_3:39814268-39814287 | None:intergenic | 40.0% |
| TTCGTGTGTTTGCACAAGAA+GGG | + | chr5_3:39814390-39814409 | Msa0810910:intron | 40.0% | |
| !! | ACGTGAACTATTTCTGCTGA+TGG | + | chr5_3:39814421-39814440 | Msa0810910:intron | 40.0% |
| !! | CTATTTCTGCTGATGGAGAA+AGG | + | chr5_3:39814428-39814447 | Msa0810910:intron | 40.0% |
| AGAAAGGGAATGGAAGACTA+GGG | + | chr5_3:39814444-39814463 | Msa0810910:intron | 40.0% | |
| TGTTGTATGAATGGGGTAGT+TGG | + | chr5_3:39814536-39814555 | Msa0810910:intron | 40.0% | |
| ! | TATGAATGGGGTAGTTGGTA+CGG | + | chr5_3:39814541-39814560 | Msa0810910:intron | 40.0% |
| AAGTCACAATGATCTGTTGC+TGG | - | chr5_3:39814591-39814610 | None:intergenic | 40.0% | |
| TGTTAGCAGTTTGTGGAAGA+GGG | - | chr5_3:39814616-39814635 | None:intergenic | 40.0% | |
| CATGGCGATCAATTAGAGAA+AGG | - | chr5_3:39814820-39814839 | None:intergenic | 40.0% | |
| GTCAAATCCTGCAAAAAGCA+TGG | - | chr5_3:39814838-39814857 | None:intergenic | 40.0% | |
| TTTGACTCCAAATCAACTCC+AGG | + | chr5_3:39814852-39814871 | Msa0810910:CDS | 40.0% | |
| TTGCTATATAGCTCACCCAA+TGG | - | chr5_3:39815145-39815164 | None:intergenic | 40.0% | |
| CTTTCCAGAGTCTTTCTTGA+GGG | - | chr5_3:39815242-39815261 | None:intergenic | 40.0% | |
| !! | AGAATGCTCTAGAGTGACTT+AGG | + | chr5_3:39815478-39815497 | Msa0810910:intron | 40.0% |
| !! | GAATGCTCTAGAGTGACTTA+GGG | + | chr5_3:39815479-39815498 | Msa0810910:intron | 40.0% |
| !! | GAATGTTGGGGAACTTGTTA+AGG | - | chr5_3:39815671-39815690 | None:intergenic | 40.0% |
| ! | TCTGATTTGTCAATGCAGCT+TGG | + | chr5_3:39815836-39815855 | Msa0810910:three_prime_UTR | 40.0% |
| TATCCAATCAGATGGCAACA+GGG | - | chr5_3:39815962-39815981 | None:intergenic | 40.0% | |
| TTATCCAATCAGATGGCAAC+AGG | - | chr5_3:39815963-39815982 | None:intergenic | 40.0% | |
| ! | ATGTTGTCGCGTGAGTGTTT+TGG | - | chr5_3:39810386-39810405 | None:intergenic | 45.0% |
| ! | TTTTTCTCTTGACCCGAACC+GGG | - | chr5_3:39810615-39810634 | None:intergenic | 45.0% |
| ! | GTTTTTCTCTTGACCCGAAC+CGG | - | chr5_3:39810616-39810635 | None:intergenic | 45.0% |
| CTGTTCCAATACGGTTTGCA+GGG | - | chr5_3:39810638-39810657 | None:intergenic | 45.0% | |
| ACTGTTCCAATACGGTTTGC+AGG | - | chr5_3:39810639-39810658 | None:intergenic | 45.0% | |
| AGAAGGGAGAGATTGTTGGT+TGG | - | chr5_3:39810740-39810759 | None:intergenic | 45.0% | |
| GTGTAGAAGGGAGAGATTGT+TGG | - | chr5_3:39810744-39810763 | None:intergenic | 45.0% | |
| !! | GTTGAGTGTGCTTGAGTTGA+TGG | + | chr5_3:39811175-39811194 | Msa0810910:intron | 45.0% |
| CAAGTCACACAACTGCACAA+GGG | - | chr5_3:39811260-39811279 | None:intergenic | 45.0% | |
| ! | GTGCACACTCTAACTTGTCA+AGG | - | chr5_3:39811312-39811331 | None:intergenic | 45.0% |
| TGACAAGTTAGAGTGTGCAC+AGG | + | chr5_3:39811312-39811331 | Msa0810910:CDS | 45.0% | |
| GCTTGCATTGTTGCAGAAGA+AGG | + | chr5_3:39811437-39811456 | Msa0810910:intron | 45.0% | |
| !! | CTGCATTGATTAGACCAACG+CGG | + | chr5_3:39811709-39811728 | Msa0810910:intron | 45.0% |
| ACAATTCCACGCATCCTTTC+AGG | - | chr5_3:39811799-39811818 | None:intergenic | 45.0% | |
| ! | TCCTGCCATAGCCTTTTCTA+AGG | + | chr5_3:39811825-39811844 | Msa0810910:intron | 45.0% |
| ACCTTAGAAAAGGCTATGGC+AGG | - | chr5_3:39811829-39811848 | None:intergenic | 45.0% | |
| !! | GGTCTAAGGGAGTGTTTGTT+TGG | + | chr5_3:39812228-39812247 | Msa0810910:intron | 45.0% |
| CATGGGAACATTTCATTCCC+AGG | + | chr5_3:39812402-39812421 | Msa0810910:intron | 45.0% | |
| GGAACATTTCATTCCCAGGT+GGG | + | chr5_3:39812406-39812425 | Msa0810910:intron | 45.0% | |
| GAACATTTCATTCCCAGGTG+GGG | + | chr5_3:39812407-39812426 | Msa0810910:intron | 45.0% | |
| !! | TGGGGTTTAGCATTGGTTAG+TGG | + | chr5_3:39812425-39812444 | Msa0810910:intron | 45.0% |
| ! | GGCTATGGCAAATGATGGAA+TGG | - | chr5_3:39812656-39812675 | None:intergenic | 45.0% |
| GTTGTGGCTATGGCAAATGA+TGG | - | chr5_3:39812661-39812680 | None:intergenic | 45.0% | |
| ! | GAGTTTTCCGACAACAACCA+TGG | + | chr5_3:39812987-39813006 | Msa0810910:intron | 45.0% |
| ! | TTTTCCGACAACAACCATGG+TGG | + | chr5_3:39812990-39813009 | Msa0810910:intron | 45.0% |
| GAATGAGGTGGCATTTAGCA+TGG | - | chr5_3:39813203-39813222 | None:intergenic | 45.0% | |
| AGTAACCATCACAGCCACTT+GGG | - | chr5_3:39813225-39813244 | None:intergenic | 45.0% | |
| AAGTAACCATCACAGCCACT+TGG | - | chr5_3:39813226-39813245 | None:intergenic | 45.0% | |
| TTCCTAGGATTACCTTTCCC+GGG | - | chr5_3:39813815-39813834 | None:intergenic | 45.0% | |
| !! | TAGAGGAAGGGGTATCTATC+TGG | - | chr5_3:39814006-39814025 | None:intergenic | 45.0% |
| GATAGATACCCCTTCCTCTA+TGG | + | chr5_3:39814006-39814025 | Msa0810910:intron | 45.0% | |
| ACACGAAACCATAGAGGAAG+GGG | - | chr5_3:39814017-39814036 | None:intergenic | 45.0% | |
| GCTGTAACACGAAACCATAG+AGG | - | chr5_3:39814023-39814042 | None:intergenic | 45.0% | |
| !! | TACAGCTCCTGGTCTTTTTC+GGG | + | chr5_3:39814037-39814056 | Msa0810910:intron | 45.0% |
| CACCTACAGACATCATACCA+TGG | - | chr5_3:39814147-39814166 | None:intergenic | 45.0% | |
| GACAGACAGATATCTCTCAG+GGG | - | chr5_3:39814234-39814253 | None:intergenic | 45.0% | |
| GAGACAGACAGATATCTCTC+AGG | - | chr5_3:39814236-39814255 | None:intergenic | 45.0% | |
| AAGAGACACTTAGCCAGAGA+CGG | - | chr5_3:39814307-39814326 | None:intergenic | 45.0% | |
| GTTCGTGTGTTTGCACAAGA+AGG | + | chr5_3:39814389-39814408 | Msa0810910:intron | 45.0% | |
| TCGTGTGTTTGCACAAGAAG+GGG | + | chr5_3:39814391-39814410 | Msa0810910:intron | 45.0% | |
| GAGAAAGGGAATGGAAGACT+AGG | + | chr5_3:39814443-39814462 | Msa0810910:intron | 45.0% | |
| TTAGCAGTTTGTGGAAGAGG+GGG | - | chr5_3:39814614-39814633 | None:intergenic | 45.0% | |
| GTTAGCAGTTTGTGGAAGAG+GGG | - | chr5_3:39814615-39814634 | None:intergenic | 45.0% | |
| GTGTTAGCAGTTTGTGGAAG+AGG | - | chr5_3:39814617-39814636 | None:intergenic | 45.0% | |
| GATCGTGTGTTAGCAGTTTG+TGG | - | chr5_3:39814623-39814642 | None:intergenic | 45.0% | |
| AACACACGATCTTGCTAGAG+AGG | + | chr5_3:39814632-39814651 | Msa0810910:intron | 45.0% | |
| ACACACGATCTTGCTAGAGA+GGG | + | chr5_3:39814633-39814652 | Msa0810910:intron | 45.0% | |
| TAGGATGCAACACGATTGCA+AGG | - | chr5_3:39814668-39814687 | None:intergenic | 45.0% | |
| CTCTCATCCAGTGAAGAAAG+TGG | + | chr5_3:39814708-39814727 | Msa0810910:intron | 45.0% | |
| GTCTGACTGTGATCAATAGC+AGG | + | chr5_3:39814741-39814760 | Msa0810910:intron | 45.0% | |
| !! | TTGATCGCCATGCTTTTTGC+AGG | + | chr5_3:39814828-39814847 | Msa0810910:intron | 45.0% |
| ACTCCAAATCAACTCCAGGA+TGG | + | chr5_3:39814856-39814875 | Msa0810910:CDS | 45.0% | |
| ! | TCACCATCCTGGAGTTGATT+TGG | - | chr5_3:39814862-39814881 | None:intergenic | 45.0% |
| GAAAAAGGGGAAGCTTCGAA+AGG | + | chr5_3:39815068-39815087 | Msa0810910:CDS | 45.0% | |
| TATAACTTTGCTCCCATCCC+AGG | - | chr5_3:39815094-39815113 | None:intergenic | 45.0% | |
| GCTTTCCAGAGTCTTTCTTG+AGG | - | chr5_3:39815243-39815262 | None:intergenic | 45.0% | |
| ! | AAGAAAGACTCTGGAAAGCC+TGG | + | chr5_3:39815244-39815263 | Msa0810910:intron | 45.0% |
| ! | AGAAAGACTCTGGAAAGCCT+GGG | + | chr5_3:39815245-39815264 | Msa0810910:intron | 45.0% |
| ACCGAATTACAAGCTCACGA+AGG | + | chr5_3:39815526-39815545 | Msa0810910:intron | 45.0% | |
| CCCTTCGTGAGCTTGTAATT+CGG | - | chr5_3:39815530-39815549 | None:intergenic | 45.0% | |
| CCGAATTACAAGCTCACGAA+GGG | + | chr5_3:39815527-39815546 | Msa0810910:intron | 45.0% | |
| TTGCAGCCCTTAGGATAACA+GGG | - | chr5_3:39815774-39815793 | None:intergenic | 45.0% | |
| ATGCTTTAGTTGCAGCCCTT+AGG | - | chr5_3:39815783-39815802 | None:intergenic | 45.0% | |
| CAGCTTGGAGAAACAATGTG+AGG | + | chr5_3:39815851-39815870 | Msa0810910:three_prime_UTR | 45.0% | |
| AAACAATGTGAGGCGAGTTC+CGG | + | chr5_3:39815861-39815880 | Msa0810910:three_prime_UTR | 45.0% | |
| !!! | ATTTTTTTTTTTTTTTTACA+GGG | - | chr5_3:39815897-39815916 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTTTTTTTAC+AGG | - | chr5_3:39815898-39815917 | None:intergenic | 5.0% |
| !!! | CGTGAGTGTTTTGGCTTGGA+AGG | - | chr5_3:39810377-39810396 | None:intergenic | 50.0% |
| TGATTCTCTCCGAACCGAAC+CGG | + | chr5_3:39810556-39810575 | Msa0810910:five_prime_UTR | 50.0% | |
| !! | ATTCCTCTTCCGGTTCGGTT+CGG | - | chr5_3:39810568-39810587 | None:intergenic | 50.0% |
| CTTCCATTCCTCTTCCGGTT+CGG | - | chr5_3:39810573-39810592 | None:intergenic | 50.0% | |
| ! | AACCTGATCGGCTTCTGGAT+CGG | - | chr5_3:39810770-39810789 | None:intergenic | 50.0% |
| ! | GGATTAACCTGATCGGCTTC+TGG | - | chr5_3:39810775-39810794 | None:intergenic | 50.0% |
| GCAAGTCACACAACTGCACA+AGG | - | chr5_3:39811261-39811280 | None:intergenic | 50.0% | |
| CTCTGCCATGCCTGAGTATA+TGG | + | chr5_3:39811658-39811677 | Msa0810910:intron | 50.0% | |
| GAGTTTCCTGAAAGGATGCG+TGG | + | chr5_3:39811790-39811809 | Msa0810910:intron | 50.0% | |
| GGGAACATTTCATTCCCAGG+TGG | + | chr5_3:39812405-39812424 | Msa0810910:intron | 50.0% | |
| ACCAATGCTAAACCCCACCT+GGG | - | chr5_3:39812422-39812441 | None:intergenic | 50.0% | |
| AACCAATGCTAAACCCCACC+TGG | - | chr5_3:39812423-39812442 | None:intergenic | 50.0% | |
| ! | AGTGGAGTTTGTTCCCACCA+TGG | + | chr5_3:39812443-39812462 | Msa0810910:intron | 50.0% |
| ! | GTGGAGTTTGTTCCCACCAT+GGG | + | chr5_3:39812444-39812463 | Msa0810910:intron | 50.0% |
| GTGGGGACATGAAAGAGAGA+GGG | - | chr5_3:39812557-39812576 | None:intergenic | 50.0% | |
| TGTGGGGACATGAAAGAGAG+AGG | - | chr5_3:39812558-39812577 | None:intergenic | 50.0% | |
| !! | TGATTTGGTGGTGGTGGTGT+GGG | - | chr5_3:39812583-39812602 | None:intergenic | 50.0% |
| ATAAGAGGAAATGGGCAGCG+CGG | - | chr5_3:39812868-39812887 | None:intergenic | 50.0% | |
| ACCACCACCATGGTTGTTGT+CGG | - | chr5_3:39812997-39813016 | None:intergenic | 50.0% | |
| !! | AACCATGGTGGTGGTCAAAG+TGG | + | chr5_3:39813002-39813021 | Msa0810910:intron | 50.0% |
| AACCACTTTGACCACCACCA+TGG | - | chr5_3:39813007-39813026 | None:intergenic | 50.0% | |
| !! | TGATTTTGCGGTGGTGGTGT+GGG | + | chr5_3:39813037-39813056 | Msa0810910:intron | 50.0% |
| AATGCCACCTCATTCCCAAG+TGG | + | chr5_3:39813208-39813227 | Msa0810910:intron | 50.0% | |
| ATCACAGCCACTTGGGAATG+AGG | - | chr5_3:39813218-39813237 | None:intergenic | 50.0% | |
| TCATTCCCAAGTGGCTGTGA+TGG | + | chr5_3:39813217-39813236 | Msa0810910:intron | 50.0% | |
| TTCCCGGGAAAGGTAATCCT+AGG | + | chr5_3:39813810-39813829 | Msa0810910:intron | 50.0% | |
| TGGTTTCGTGTTACAGCTCC+TGG | + | chr5_3:39814026-39814045 | Msa0810910:intron | 50.0% | |
| !! | ACAGCTCCTGGTCTTTTTCG+GGG | + | chr5_3:39814038-39814057 | Msa0810910:intron | 50.0% |
| CTGCTGATGGAGAAAGGGAA+TGG | + | chr5_3:39814434-39814453 | Msa0810910:intron | 50.0% | |
| TTCGGTTGAGAGATGGGCAT+TGG | + | chr5_3:39814475-39814494 | Msa0810910:intron | 50.0% | |
| TCGGTTGAGAGATGGGCATT+GGG | + | chr5_3:39814476-39814495 | Msa0810910:intron | 50.0% | |
| AACGCCCTCAAGAAAGACTC+TGG | + | chr5_3:39815235-39815254 | Msa0810910:intron | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+GGG | + | chr5_3:39815320-39815339 | Msa0810910:intron | 50.0% | |
| GGCACATATGCCCTCCATAA+GGG | + | chr5_3:39815372-39815391 | Msa0810910:intron | 50.0% | |
| ACTTAAGCCCCAAGCAGCTT+GGG | - | chr5_3:39815505-39815524 | None:intergenic | 50.0% | |
| GTTGCAGCCCTTAGGATAAC+AGG | - | chr5_3:39815775-39815794 | None:intergenic | 50.0% | |
| ! | GGGCTGCAACTAAAGCATTC+TGG | + | chr5_3:39815785-39815804 | Msa0810910:exon | 50.0% |
| TTTACAGGGGAGGGGTAAAC+CGG | - | chr5_3:39815883-39815902 | None:intergenic | 50.0% | |
| !!! | GTCGCGTGAGTGTTTTGGCT+TGG | - | chr5_3:39810381-39810400 | None:intergenic | 55.0% |
| GAACCGAACCGGAAGAGGAA+TGG | + | chr5_3:39810567-39810586 | Msa0810910:exon | 55.0% | |
| TTGCCGATCCAAACCCGGTT+CGG | + | chr5_3:39810599-39810618 | Msa0810910:CDS | 55.0% | |
| ! | CTGGATCGGGAGGTGTAGAA+GGG | - | chr5_3:39810756-39810775 | None:intergenic | 55.0% |
| ! | TCTGGATCGGGAGGTGTAGA+AGG | - | chr5_3:39810757-39810776 | None:intergenic | 55.0% |
| ! | ACCTGATCGGCTTCTGGATC+GGG | - | chr5_3:39810769-39810788 | None:intergenic | 55.0% |
| GTTAGAGTGTGCACAGGCGT+CGG | + | chr5_3:39811318-39811337 | Msa0810910:CDS | 55.0% | |
| TCCCAGGTGGGGTTTAGCAT+TGG | + | chr5_3:39812418-39812437 | Msa0810910:intron | 55.0% | |
| GGGACATGAAAGAGAGAGGG+TGG | - | chr5_3:39812554-39812573 | None:intergenic | 55.0% | |
| !! | GTGATTTGGTGGTGGTGGTG+TGG | - | chr5_3:39812584-39812603 | None:intergenic | 55.0% |
| AAATGGGCAGCGCGGGAATT+TGG | - | chr5_3:39812860-39812879 | None:intergenic | 55.0% | |
| TAAGAGGAAATGGGCAGCGC+GGG | - | chr5_3:39812867-39812886 | None:intergenic | 55.0% | |
| TCCGACAACAACCATGGTGG+TGG | + | chr5_3:39812993-39813012 | Msa0810910:intron | 55.0% | |
| !! | GTGATTTTGCGGTGGTGGTG+TGG | + | chr5_3:39813036-39813055 | Msa0810910:intron | 55.0% |
| ACAGCCACTTGGGAATGAGG+TGG | - | chr5_3:39813215-39813234 | None:intergenic | 55.0% | |
| TCACGCAGGACGAGTAGAGA+TGG | - | chr5_3:39814349-39814368 | None:intergenic | 55.0% | |
| GAGACGAGAAATGGTCACGC+AGG | - | chr5_3:39814363-39814382 | None:intergenic | 55.0% | |
| CAACTCCAGGATGGTGAGTC+TGG | + | chr5_3:39814865-39814884 | Msa0810910:intron | 55.0% | |
| AAGCTTCGAAAGGCCTGGGA+TGG | + | chr5_3:39815078-39815097 | Msa0810910:CDS | 55.0% | |
| AGCTTCGAAAGGCCTGGGAT+GGG | + | chr5_3:39815079-39815098 | Msa0810910:CDS | 55.0% | |
| ! | TCATGGGGTGCTACAGCCAT+TGG | + | chr5_3:39815126-39815145 | Msa0810910:intron | 55.0% |
| ! | CATGGGGTGCTACAGCCATT+GGG | + | chr5_3:39815127-39815146 | Msa0810910:intron | 55.0% |
| CAAGCACGAGTCTTGGGACA+AGG | - | chr5_3:39815321-39815340 | None:intergenic | 55.0% | |
| CTTGTCCCAAGACTCGTGCT+TGG | + | chr5_3:39815319-39815338 | Msa0810910:intron | 55.0% | |
| TGTCCCAAGACTCGTGCTTG+GGG | + | chr5_3:39815321-39815340 | Msa0810910:intron | 55.0% | |
| GGGCACATATGCCCTCCATA+AGG | + | chr5_3:39815371-39815390 | Msa0810910:intron | 55.0% | |
| TATGCCCTCCATAAGGGCTC+AGG | + | chr5_3:39815378-39815397 | Msa0810910:intron | 55.0% | |
| TTGTCAAGACGGCGCCCTTA+GGG | - | chr5_3:39815442-39815461 | None:intergenic | 55.0% | |
| ACTTAGGGCCCAAGCTGCTT+GGG | + | chr5_3:39815494-39815513 | Msa0810910:intron | 55.0% | |
| GACTTAAGCCCCAAGCAGCT+TGG | - | chr5_3:39815506-39815525 | None:intergenic | 55.0% | |
| !! | ACCTCTTGAGAGCACTCCCA+AGG | + | chr5_3:39815560-39815579 | Msa0810910:intron | 55.0% |
| !! | CCTCTTGAGAGCACTCCCAA+GGG | + | chr5_3:39815561-39815580 | Msa0810910:intron | 55.0% |
| GGACCCTGTTGCCATCTGAT+TGG | + | chr5_3:39815956-39815975 | Msa0810910:three_prime_UTR | 55.0% | |
| TCTCCGAACCGAACCGGAAG+AGG | + | chr5_3:39810562-39810581 | Msa0810910:five_prime_UTR | 60.0% | |
| TGCCGATCCAAACCCGGTTC+GGG | + | chr5_3:39810600-39810619 | Msa0810910:CDS | 60.0% | |
| GACCCGAACCGGGTTTGGAT+CGG | - | chr5_3:39810605-39810624 | None:intergenic | 60.0% | |
| CTCTTGACCCGAACCGGGTT+TGG | - | chr5_3:39810610-39810629 | None:intergenic | 60.0% | |
| ! | TGATCGGCTTCTGGATCGGG+AGG | - | chr5_3:39810766-39810785 | None:intergenic | 60.0% |
| TCCCGATCCAGAAGCCGATC+AGG | + | chr5_3:39810765-39810784 | Msa0810910:CDS | 60.0% | |
| !! | TGGTGGTGGTGTGGGTGTGT+GGG | - | chr5_3:39812575-39812594 | None:intergenic | 60.0% |
| ! | GGTGGTGGTGTGGGTGTATG+AGG | + | chr5_3:39813046-39813065 | Msa0810910:intron | 60.0% |
| GATCTCTGTGCGACCGTCTC+TGG | + | chr5_3:39814291-39814310 | Msa0810910:intron | 60.0% | |
| AGCAGCCAGACTCACCATCC+TGG | - | chr5_3:39814873-39814892 | None:intergenic | 60.0% | |
| AGGGGAAGCTTCGAAAGGCC+TGG | + | chr5_3:39815073-39815092 | Msa0810910:CDS | 60.0% | |
| GGGGAAGCTTCGAAAGGCCT+GGG | + | chr5_3:39815074-39815093 | Msa0810910:CDS | 60.0% | |
| GTTGAGGCGGCGCCTTTGAA+GGG | - | chr5_3:39815275-39815294 | None:intergenic | 60.0% | |
| TGTTGAGGCGGCGCCTTTGA+AGG | - | chr5_3:39815276-39815295 | None:intergenic | 60.0% | |
| GTCCCAAGACTCGTGCTTGG+GGG | + | chr5_3:39815322-39815341 | Msa0810910:intron | 60.0% | |
| TCCCAAGACTCGTGCTTGGG+GGG | + | chr5_3:39815323-39815342 | Msa0810910:intron | 60.0% | |
| GCTTCAGGAGCCCTTCGAGA+GGG | - | chr5_3:39815406-39815425 | None:intergenic | 60.0% | |
| TGTCAAGACGGCGCCCTTAG+GGG | - | chr5_3:39815441-39815460 | None:intergenic | 60.0% | |
| CTTGTCAAGACGGCGCCCTT+AGG | - | chr5_3:39815443-39815462 | None:intergenic | 60.0% | |
| GACTTAGGGCCCAAGCTGCT+TGG | + | chr5_3:39815493-39815512 | Msa0810910:intron | 60.0% | |
| CTTAGGGCCCAAGCTGCTTG+GGG | + | chr5_3:39815495-39815514 | Msa0810910:intron | 60.0% | |
| !! | CCCTTGGGAGTGCTCTCAAG+AGG | - | chr5_3:39815564-39815583 | None:intergenic | 60.0% |
| ! | GGTGGTGGTGTGGGTGTGTG+GGG | - | chr5_3:39812574-39812593 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGTGGGTGTG+TGG | - | chr5_3:39812576-39812595 | None:intergenic | 65.0% |
| AGCCTGGGCGTGCCCTTCAA+AGG | + | chr5_3:39815260-39815279 | Msa0810910:intron | 65.0% | |
| GCCCCCCAAGCACGAGTCTT+GGG | - | chr5_3:39815327-39815346 | None:intergenic | 65.0% | |
| AGCCCCCCAAGCACGAGTCT+TGG | - | chr5_3:39815328-39815347 | None:intergenic | 65.0% | |
| GGCGCCTGAGCCCTTATGGA+GGG | - | chr5_3:39815385-39815404 | None:intergenic | 65.0% | |
| !! | AGAGGGCGCCTGAGCCCTTA+TGG | - | chr5_3:39815389-39815408 | None:intergenic | 65.0% |
| GGCTTCAGGAGCCCTTCGAG+AGG | - | chr5_3:39815407-39815426 | None:intergenic | 65.0% | |
| CGAAGGGCTCCTGAAGCCCT+AGG | + | chr5_3:39815409-39815428 | Msa0810910:intron | 65.0% | |
| GTCAAGACGGCGCCCTTAGG+GGG | - | chr5_3:39815440-39815459 | None:intergenic | 65.0% | |
| ! | CGCCTTTGAAGGGCACGCCC+AGG | - | chr5_3:39815265-39815284 | None:intergenic | 70.0% |
| GACTCGTGCTTGGGGGGCTG+TGG | + | chr5_3:39815329-39815348 | Msa0810910:intron | 70.0% | |
| GGGCGCCTGAGCCCTTATGG+AGG | - | chr5_3:39815386-39815405 | None:intergenic | 70.0% | |
| GGCTCAGGCGCCCTCTCGAA+GGG | + | chr5_3:39815393-39815412 | Msa0810910:intron | 70.0% | |
| CCCTTAGGGGGACGCGCCTA+GGG | - | chr5_3:39815428-39815447 | None:intergenic | 70.0% | |
| CCCTAGGCGCGTCCCCCTAA+GGG | + | chr5_3:39815425-39815444 | Msa0810910:intron | 70.0% | |
| GGGCTCAGGCGCCCTCTCGA+AGG | + | chr5_3:39815392-39815411 | Msa0810910:intron | 75.0% | |
| GGGGACGCGCCTAGGGCTTC+AGG | - | chr5_3:39815421-39815440 | None:intergenic | 75.0% | |
| GCCCTAGGCGCGTCCCCCTA+AGG | + | chr5_3:39815424-39815443 | Msa0810910:intron | 75.0% | |
| GCCCTTAGGGGGACGCGCCT+AGG | - | chr5_3:39815429-39815448 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 39810369 | 39816121 | 39810369 | ID=Msa0810910;Name=Msa0810910 |
| chr5_3 | mRNA | 39810369 | 39816121 | 39810369 | ID=Msa0810910-mRNA-1;Parent=Msa0810910;Name=Msa0810910-mRNA-1;_AED=0.30;_eAED=0.30;_QI=217|0.8|0.83|1|0.8|0.83|6|324|194 |
| chr5_3 | exon | 39810369 | 39810786 | 39810369 | ID=Msa0810910-mRNA-1:exon:12118;Parent=Msa0810910-mRNA-1 |
| chr5_3 | exon | 39811268 | 39811358 | 39811268 | ID=Msa0810910-mRNA-1:exon:12119;Parent=Msa0810910-mRNA-1 |
| chr5_3 | exon | 39811453 | 39811610 | 39811453 | ID=Msa0810910-mRNA-1:exon:12120;Parent=Msa0810910-mRNA-1 |
| chr5_3 | exon | 39814850 | 39814877 | 39814850 | ID=Msa0810910-mRNA-1:exon:12121;Parent=Msa0810910-mRNA-1 |
| chr5_3 | exon | 39815040 | 39815107 | 39815040 | ID=Msa0810910-mRNA-1:exon:12122;Parent=Msa0810910-mRNA-1 |
| chr5_3 | exon | 39815759 | 39816121 | 39815759 | ID=Msa0810910-mRNA-1:exon:12123;Parent=Msa0810910-mRNA-1 |
| chr5_3 | five_prime_UTR | 39810369 | 39810585 | 39810369 | ID=Msa0810910-mRNA-1:five_prime_utr;Parent=Msa0810910-mRNA-1 |
| chr5_3 | CDS | 39810586 | 39810786 | 39810586 | ID=Msa0810910-mRNA-1:cds;Parent=Msa0810910-mRNA-1 |
| chr5_3 | CDS | 39811268 | 39811358 | 39811268 | ID=Msa0810910-mRNA-1:cds;Parent=Msa0810910-mRNA-1 |
| chr5_3 | CDS | 39811453 | 39811610 | 39811453 | ID=Msa0810910-mRNA-1:cds;Parent=Msa0810910-mRNA-1 |
| chr5_3 | CDS | 39814850 | 39814877 | 39814850 | ID=Msa0810910-mRNA-1:cds;Parent=Msa0810910-mRNA-1 |
| chr5_3 | CDS | 39815040 | 39815107 | 39815040 | ID=Msa0810910-mRNA-1:cds;Parent=Msa0810910-mRNA-1 |
| chr5_3 | CDS | 39815759 | 39815797 | 39815759 | ID=Msa0810910-mRNA-1:cds;Parent=Msa0810910-mRNA-1 |
| chr5_3 | three_prime_UTR | 39815798 | 39816121 | 39815798 | ID=Msa0810910-mRNA-1:three_prime_utr;Parent=Msa0810910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
