AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0812300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0812300 MtrunA17_Chr5g0428991 92.332 626 40 4 1 620 1 624 0.0 1169
Msa0812300 MtrunA17_Chr3g0128151 48.645 664 240 14 1 634 1 593 0.0 558
Msa0812300 MtrunA17_Chr3g0128111 70.673 208 54 1 28 235 45 245 1.32e-108 327
Msa0812300 MtrunA17_Chr3g0109821 62.500 152 56 1 25 175 6 157 1.15e-57 206
Msa0812300 MtrunA17_Chr6g0481091 59.868 152 61 0 25 176 6 157 1.30e-57 194
Msa0812300 MtrunA17_Chr2g0309891 52.632 190 77 3 25 208 6 188 6.88e-57 196
Msa0812300 MtrunA17_Chr5g0433781 61.589 151 58 0 25 175 6 156 2.50e-56 202
Msa0812300 MtrunA17_Chr5g0400461 53.254 169 69 3 25 186 6 171 9.02e-53 184
Msa0812300 MtrunA17_Chr3g0092671 38.676 287 145 8 20 305 1 257 7.44e-51 184
Msa0812300 MtrunA17_Chr8g0364791 51.282 156 76 0 20 175 1 156 1.06e-50 182
Msa0812300 MtrunA17_Chr8g0345691 54.839 155 61 4 21 172 8 156 2.12e-50 180
Msa0812300 MtrunA17_Chr8g0345671 57.616 151 55 4 25 172 11 155 8.17e-50 178
Msa0812300 MtrunA17_Chr4g0018391 52.564 156 71 3 21 175 3 156 9.69e-50 176
Msa0812300 MtrunA17_Chr5g0398971 52.229 157 72 3 21 175 3 158 2.11e-49 176
Msa0812300 MtrunA17_Chr4g0054791 54.717 159 67 3 25 179 6 163 2.68e-49 174
Msa0812300 MtrunA17_Chr1g0197361 54.362 149 66 2 28 175 11 158 1.87e-48 179
Msa0812300 MtrunA17_Chr3g0130101 52.703 148 70 0 28 175 10 157 4.94e-48 172
Msa0812300 MtrunA17_Chr4g0056541 47.879 165 83 2 21 184 3 165 4.98e-48 172
Msa0812300 MtrunA17_Chr3g0091921 45.972 211 98 4 15 211 2 210 6.04e-48 170
Msa0812300 MtrunA17_Chr4g0060931 53.254 169 68 4 15 175 2 167 8.61e-48 171
Msa0812300 MtrunA17_Chr1g0197351 53.459 159 68 1 25 177 42 200 1.11e-47 174
Msa0812300 MtrunA17_Chr1g0201021 50.286 175 81 1 1 175 1 169 1.50e-47 176
Msa0812300 MtrunA17_Chr8g0372121 49.342 152 74 2 25 175 6 155 3.87e-47 168
Msa0812300 MtrunA17_Chr8g0384201 47.134 157 83 0 20 176 1 157 1.13e-46 172
Msa0812300 MtrunA17_Chr5g0405211 49.068 161 79 2 25 184 8 166 1.35e-46 168
Msa0812300 MtrunA17_Chr4g0017921 52.258 155 68 3 25 177 8 158 1.36e-46 168
Msa0812300 MtrunA17_Chr6g0484441 52.980 151 67 2 25 175 5 151 1.68e-46 167
Msa0812300 MtrunA17_Chr8g0361731 49.697 165 70 4 28 181 17 179 2.69e-46 168
Msa0812300 MtrunA17_Chr7g0217721 42.995 207 95 4 10 199 8 208 2.82e-46 167
Msa0812300 MtrunA17_Chr2g0309331 52.288 153 69 3 25 175 10 160 2.92e-46 167
Msa0812300 MtrunA17_Chr3g0130731 49.724 181 74 6 25 200 7 175 4.05e-46 165
Msa0812300 MtrunA17_Chr6g0453451 43.396 212 107 4 24 231 19 221 7.05e-46 165
Msa0812300 MtrunA17_Chr4g0042561 51.572 159 67 3 23 175 7 161 1.35e-45 162
Msa0812300 MtrunA17_Chr1g0200561 51.316 152 71 2 25 175 19 168 1.38e-45 165
Msa0812300 MtrunA17_Chr2g0318081 49.091 165 79 2 12 176 6 165 1.62e-45 165
Msa0812300 MtrunA17_Chr5g0417791 47.826 184 78 4 24 196 2 178 7.20e-45 160
Msa0812300 MtrunA17_Chr7g0217711 54.225 142 59 2 10 151 8 143 8.21e-45 157
Msa0812300 MtrunA17_Chr6g0461661 48.765 162 67 4 25 177 18 172 1.22e-44 163
Msa0812300 MtrunA17_Chr5g0417001 47.561 164 74 4 28 181 17 178 2.45e-44 163
Msa0812300 MtrunA17_Chr3g0124761 51.592 157 66 4 24 175 6 157 4.63e-44 159
Msa0812300 MtrunA17_Chr7g0252971 46.409 181 74 4 25 188 8 182 4.89e-44 160
Msa0812300 MtrunA17_Chr8g0384721 51.266 158 66 4 24 175 6 158 7.15e-44 158
Msa0812300 MtrunA17_Chr3g0139331 53.595 153 65 3 25 175 11 159 1.11e-43 160
Msa0812300 MtrunA17_Chr6g0453131 46.552 174 81 3 12 175 2 173 1.26e-43 161
Msa0812300 MtrunA17_Chr2g0312321 50.311 161 65 4 24 178 10 161 1.90e-43 158
Msa0812300 MtrunA17_Chr4g0076731 51.678 149 67 3 28 175 57 201 1.98e-43 161
Msa0812300 MtrunA17_Chr2g0318101 46.988 166 73 3 25 177 15 178 2.77e-43 159
Msa0812300 MtrunA17_Chr2g0316971 52.500 160 60 4 25 175 23 175 2.78e-43 159
Msa0812300 MtrunA17_Chr8g0346001 44.944 178 86 3 17 182 7 184 3.16e-43 160
Msa0812300 MtrunA17_Chr8g0359921 50.307 163 75 3 20 179 9 168 6.48e-43 157
Msa0812300 MtrunA17_Chr1g0147421 46.316 190 89 5 25 211 27 206 7.47e-43 158
Msa0812300 MtrunA17_Chr8g0345731 56.061 132 51 4 25 150 24 154 3.82e-42 150
Msa0812300 MtrunA17_Chr7g0253011 49.693 163 64 4 25 176 17 172 3.87e-42 156
Msa0812300 MtrunA17_Chr4g0047841 45.556 180 71 4 25 179 15 192 3.76e-41 152
Msa0812300 MtrunA17_Chr2g0321741 46.707 167 78 4 46 212 13 168 4.56e-41 153
Msa0812300 MtrunA17_Chr7g0214071 51.613 155 64 4 24 175 14 160 5.86e-41 149
Msa0812300 MtrunA17_Chr8g0345711 51.799 139 63 3 25 160 12 149 8.38e-41 146
Msa0812300 MtrunA17_Chr7g0263931 37.549 253 131 7 24 260 10 251 2.93e-40 150
Msa0812300 MtrunA17_Chr3g0144271 56.154 130 52 3 25 151 23 150 6.53e-39 148
Msa0812300 MtrunA17_Chr1g0183741 48.366 153 71 3 25 175 10 156 9.10e-39 144
Msa0812300 MtrunA17_Chr2g0326361 44.693 179 86 6 25 196 14 186 2.50e-38 144
Msa0812300 MtrunA17_Chr7g0261411 47.682 151 71 3 25 173 10 154 1.13e-36 139
Msa0812300 MtrunA17_Chr5g0442771 47.500 160 70 5 28 175 21 178 1.64e-36 139
Msa0812300 MtrunA17_Chr3g0131911 43.275 171 83 3 22 182 11 177 1.94e-36 136
Msa0812300 MtrunA17_Chr8g0385991 42.703 185 84 5 22 197 11 182 2.28e-36 136
Msa0812300 MtrunA17_Chr4g0038751 46.358 151 71 3 28 175 18 161 3.31e-36 137
Msa0812300 MtrunA17_Chr8g0345741 45.638 149 70 5 36 181 2 142 4.43e-36 132
Msa0812300 MtrunA17_Chr2g0311651 42.697 178 81 6 16 175 12 186 5.72e-36 137
Msa0812300 MtrunA17_Chr2g0311661 48.551 138 65 3 19 151 14 150 1.08e-35 136
Msa0812300 MtrunA17_Chr3g0113001 42.169 166 83 4 73 232 11 169 1.47e-34 133
Msa0812300 MtrunA17_Chr8g0345701 48.951 143 53 5 25 150 7 146 2.21e-32 123
Msa0812300 MtrunA17_Chr8g0345721 42.949 156 56 4 27 150 37 191 6.93e-32 122
Msa0812300 MtrunA17_Chr4g0026141 42.038 157 82 5 25 173 5 160 2.65e-31 122
Msa0812300 MtrunA17_Chr2g0321631 41.667 156 83 5 26 173 5 160 1.25e-30 120
Msa0812300 MtrunA17_Chr7g0266701 38.182 165 90 6 22 175 1 164 5.57e-29 116
Msa0812300 MtrunA17_Chr3g0113031 44.000 150 70 5 90 232 3 145 3.34e-28 114
Msa0812300 MtrunA17_Chr7g0243371 51.351 74 34 1 80 151 17 90 1.29e-19 85.1
Msa0812300 MtrunA17_Chr4g0050701 36.434 129 70 3 25 151 11 129 7.88e-19 85.1
Msa0812300 MtrunA17_Chr7g0251651 36.719 128 77 3 24 150 17 141 7.74e-16 76.3
Msa0812300 MtrunA17_Chr7g0251661 35.433 127 78 3 25 150 10 133 3.72e-14 70.5
Msa0812300 MtrunA17_Chr8g0384351 33.939 165 82 8 24 185 9 149 5.74e-14 70.9
Msa0812300 MtrunA17_Chr3g0130321 33.133 166 85 8 24 174 6 160 8.92e-13 67.8
Msa0812300 MtrunA17_Chr3g0113011 56.250 48 21 0 24 71 18 65 7.07e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0812300 AT4G35580.1 43.640 456 198 18 17 459 1 410 8.90e-97 306
Msa0812300 AT4G35580.3 43.640 456 198 18 17 459 1 410 1.07e-96 307
Msa0812300 AT4G35580.2 43.640 456 198 18 17 459 1 410 1.19e-96 307
Msa0812300 AT3G49530.2 38.462 468 177 15 15 459 3 382 1.50e-90 287
Msa0812300 AT3G49530.1 38.462 468 177 15 15 459 3 382 1.63e-90 289
Msa0812300 AT1G33060.1 37.129 606 274 20 16 550 15 584 3.80e-89 290
Msa0812300 AT1G33060.2 36.629 617 284 20 16 561 15 595 3.96e-89 290
Msa0812300 AT5G24590.2 47.110 346 118 12 15 330 3 313 4.94e-89 284
Msa0812300 AT3G17730.1 61.842 152 58 0 25 176 6 157 2.06e-60 202
Msa0812300 AT1G65910.1 54.444 180 72 1 25 194 6 185 5.75e-58 206
Msa0812300 AT5G17260.1 62.500 152 56 1 25 175 6 157 5.01e-57 200
Msa0812300 AT3G03200.1 62.500 152 56 1 25 175 6 157 7.44e-56 197
Msa0812300 AT3G10490.1 50.820 183 87 2 3 184 7 187 6.63e-53 182
Msa0812300 AT3G10480.2 51.429 175 83 1 3 177 7 179 1.35e-52 187
Msa0812300 AT3G10480.1 52.247 178 78 3 3 177 7 180 1.71e-52 187
Msa0812300 AT3G10500.1 55.484 155 69 0 21 175 5 159 2.90e-52 189
Msa0812300 AT3G10490.2 50.820 183 87 2 3 184 7 187 2.68e-51 184
Msa0812300 AT4G17980.1 55.346 159 63 3 25 177 6 162 5.26e-51 177
Msa0812300 AT5G04410.1 53.548 155 72 0 21 175 5 159 5.90e-51 186
Msa0812300 AT5G46590.1 54.140 157 66 3 25 177 6 160 9.33e-51 178
Msa0812300 AT4G17980.2 55.346 159 63 3 25 177 6 162 9.33e-51 178
Msa0812300 AT1G54330.1 58.278 151 60 1 25 175 6 153 6.34e-50 176
Msa0812300 AT1G62700.1 52.564 156 71 3 21 175 3 156 8.25e-50 178
Msa0812300 AT1G62700.2 52.564 156 71 3 21 175 3 156 8.25e-50 178
Msa0812300 AT1G12260.2 51.923 156 72 3 21 175 3 156 1.74e-49 176
Msa0812300 AT1G12260.1 51.923 156 72 3 21 175 3 156 2.63e-49 177
Msa0812300 AT5G46590.2 59.375 128 51 1 25 151 6 133 5.54e-49 172
Msa0812300 AT5G07680.2 55.063 158 57 3 25 175 3 153 8.72e-49 173
Msa0812300 AT5G07680.1 55.063 158 57 3 25 175 17 167 1.09e-48 173
Msa0812300 AT5G61430.1 55.556 153 64 2 25 175 16 166 1.28e-48 173
Msa0812300 AT5G62380.2 49.091 165 81 2 21 184 3 165 2.23e-48 173
Msa0812300 AT5G62380.1 49.091 165 81 2 21 184 3 165 2.23e-48 173
Msa0812300 AT5G39610.1 56.209 153 63 2 25 175 20 170 2.95e-48 171
Msa0812300 AT4G10350.1 53.289 152 70 1 25 175 9 160 4.22e-48 172
Msa0812300 AT2G27300.1 51.899 158 68 3 20 177 9 158 5.79e-48 171
Msa0812300 AT3G44290.2 55.172 145 57 2 28 172 17 153 7.37e-48 168
Msa0812300 AT1G33280.1 53.896 154 67 2 25 177 8 158 8.70e-48 170
Msa0812300 AT1G32510.1 51.515 165 72 2 25 181 6 170 1.64e-47 169
Msa0812300 AT2G18060.3 44.271 192 94 4 25 212 9 191 1.72e-47 171
Msa0812300 AT2G18060.1 44.271 192 94 4 25 212 9 191 1.72e-47 171
Msa0812300 AT5G09330.5 41.702 235 126 4 24 254 5 232 8.47e-47 172
Msa0812300 AT5G09330.2 41.702 235 126 4 24 254 5 232 8.47e-47 172
Msa0812300 AT5G09330.4 41.702 235 126 4 24 254 5 232 8.47e-47 172
Msa0812300 AT5G09330.3 41.702 235 126 4 24 254 5 232 8.47e-47 172
Msa0812300 AT5G09330.1 41.702 235 126 4 24 254 5 232 8.47e-47 172
Msa0812300 AT3G44290.1 55.172 145 57 2 28 172 17 153 8.76e-47 168
Msa0812300 AT5G22290.1 53.793 145 60 2 28 172 24 161 1.53e-46 168
Msa0812300 AT4G27410.2 50.000 164 77 2 12 175 4 162 1.93e-46 166
Msa0812300 AT3G29035.1 51.724 174 79 4 25 195 24 195 3.02e-46 166
Msa0812300 AT4G36160.1 50.658 152 72 2 25 175 10 159 3.34e-46 168
Msa0812300 AT4G36160.3 50.658 152 72 2 25 175 10 159 3.34e-46 168
Msa0812300 AT4G36160.2 50.658 152 72 2 25 175 14 163 3.73e-46 168
Msa0812300 AT5G08790.1 50.000 176 76 4 25 193 7 177 4.00e-46 165
Msa0812300 AT3G10480.3 45.366 205 73 4 9 177 12 213 8.82e-46 170
Msa0812300 AT3G18400.1 53.289 152 66 3 25 175 5 152 1.74e-45 164
Msa0812300 AT5G66300.1 50.000 152 74 2 25 175 12 162 2.11e-45 163
Msa0812300 AT1G69490.1 48.521 169 77 3 17 179 1 165 4.41e-45 162
Msa0812300 AT2G24430.2 54.248 153 65 3 25 175 16 165 7.15e-45 162
Msa0812300 AT2G24430.1 54.248 153 65 3 25 175 16 165 7.15e-45 162
Msa0812300 AT5G63790.1 49.451 182 79 6 25 199 50 225 7.51e-45 162
Msa0812300 AT5G63790.2 49.451 182 79 6 25 199 60 235 8.23e-45 162
Msa0812300 AT5G64060.1 50.000 152 76 0 25 176 6 157 1.41e-44 163
Msa0812300 AT3G15500.1 49.091 165 79 2 12 176 4 163 1.56e-44 162
Msa0812300 AT1G34190.1 55.405 148 66 0 28 175 19 166 1.82e-44 167
Msa0812300 AT3G04060.1 51.534 163 64 4 25 179 20 175 2.63e-44 162
Msa0812300 AT1G34180.3 53.378 148 69 0 28 175 19 166 3.20e-44 164
Msa0812300 AT1G76420.1 52.941 153 67 3 25 175 22 171 3.36e-44 161
Msa0812300 AT5G18270.2 50.000 174 77 4 14 179 5 176 3.77e-44 161
Msa0812300 AT5G18270.1 50.000 174 77 4 14 179 5 176 6.04e-44 160
Msa0812300 AT1G56010.2 48.795 166 69 4 24 180 18 176 6.42e-44 160
Msa0812300 AT1G52890.1 48.485 165 80 2 12 176 4 163 8.83e-44 159
Msa0812300 AT1G71930.2 48.684 152 75 2 25 175 9 158 1.00e-43 159
Msa0812300 AT1G71930.1 48.684 152 75 2 25 175 9 158 1.00e-43 159
Msa0812300 AT2G02450.1 50.336 149 69 3 28 175 54 198 1.04e-43 161
Msa0812300 AT1G26870.1 44.920 187 86 4 28 199 19 203 1.10e-43 162
Msa0812300 AT2G02450.2 50.336 149 69 3 28 175 54 198 1.16e-43 162
Msa0812300 AT2G46770.1 41.463 205 97 5 13 194 4 208 1.66e-43 160
Msa0812300 AT3G15170.1 52.229 157 59 4 25 172 20 169 1.81e-43 159
Msa0812300 AT1G34180.1 53.378 148 69 0 28 175 19 166 2.01e-43 164
Msa0812300 AT4G27410.3 45.810 179 79 2 12 175 4 179 2.13e-43 158
Msa0812300 AT3G12977.1 44.385 187 95 5 25 205 18 201 3.42e-43 157
Msa0812300 AT3G04070.2 47.126 174 78 5 25 186 10 181 4.88e-43 158
Msa0812300 AT1G01720.1 50.000 160 69 4 22 175 4 158 5.07e-43 157
Msa0812300 AT1G32770.1 46.023 176 72 4 17 175 8 177 1.72e-42 157
Msa0812300 AT5G13180.1 50.649 154 68 3 24 175 13 160 3.98e-42 153
Msa0812300 AT2G33480.1 51.316 152 69 1 24 175 14 160 4.54e-42 153
Msa0812300 AT5G39820.1 46.199 171 67 5 28 175 23 191 4.76e-42 155
Msa0812300 AT1G77450.1 38.400 250 118 8 24 268 9 227 1.04e-41 152
Msa0812300 AT1G61110.1 50.000 164 67 4 25 175 16 177 3.23e-41 152
Msa0812300 AT1G34180.4 49.375 160 69 1 28 175 19 178 5.21e-41 155
Msa0812300 AT5G53950.1 51.875 160 61 4 25 175 17 169 5.32e-41 154
Msa0812300 AT2G33480.2 51.316 152 67 2 24 175 14 158 8.23e-41 150
Msa0812300 AT2G43000.1 46.452 155 79 3 23 175 15 167 1.13e-40 150
Msa0812300 AT3G04070.1 43.158 190 78 5 25 186 10 197 1.35e-40 152
Msa0812300 AT3G61910.1 41.573 178 84 3 17 177 3 177 1.40e-40 151
Msa0812300 AT1G34180.2 49.375 160 69 1 28 175 19 178 2.61e-40 155
Msa0812300 AT1G79580.3 49.020 153 73 3 25 175 17 166 2.79e-40 151
Msa0812300 AT1G79580.5 49.020 153 73 3 25 175 17 166 2.79e-40 151
Msa0812300 AT1G79580.4 49.020 153 73 3 25 175 17 166 2.79e-40 151
Msa0812300 AT1G79580.2 49.020 153 73 3 25 175 17 166 2.79e-40 151
Msa0812300 AT1G79580.1 49.020 153 73 3 25 175 17 166 2.79e-40 151
Msa0812300 AT3G15510.1 45.562 169 77 3 29 184 21 187 4.66e-40 150
Msa0812300 AT2G17040.1 37.308 260 143 7 28 274 9 261 1.96e-38 144
Msa0812300 AT4G28530.1 41.315 213 101 4 24 218 9 215 1.96e-37 143
Msa0812300 AT1G32870.2 51.634 153 70 2 25 175 10 160 6.10e-37 145
Msa0812300 AT1G32870.1 51.634 153 70 2 25 175 10 160 6.58e-37 145
Msa0812300 AT5G04395.1 45.714 140 62 2 25 150 28 167 1.21e-36 135
Msa0812300 AT1G32870.3 51.634 153 70 2 25 175 46 196 1.65e-36 144
Msa0812300 AT3G12910.1 41.837 196 82 9 1 175 1 185 9.70e-36 137
Msa0812300 AT4G01550.1 40.884 181 91 5 27 199 6 178 4.57e-35 139
Msa0812300 AT1G52880.1 46.626 163 73 4 29 179 21 181 2.15e-34 133
Msa0812300 AT5G61430.2 60.204 98 37 1 80 175 6 103 1.04e-33 130
Msa0812300 AT1G02230.1 42.045 176 86 8 26 193 4 171 1.81e-31 126
Msa0812300 AT3G12977.2 44.961 129 66 2 82 205 20 148 2.76e-31 122
Msa0812300 AT4G10350.2 55.319 94 42 0 82 175 20 113 3.36e-30 121
Msa0812300 AT4G01520.1 36.066 183 91 6 22 196 1 165 3.58e-30 121
Msa0812300 AT5G22380.1 41.139 158 86 5 23 173 3 160 2.13e-29 117
Msa0812300 AT4G01540.3 35.955 178 88 6 27 196 6 165 1.17e-28 119
Msa0812300 AT4G01540.4 35.955 178 88 6 27 196 6 165 1.23e-28 119
Msa0812300 AT4G01540.2 35.955 178 88 6 27 196 6 165 2.19e-28 118
Msa0812300 AT4G01540.1 35.955 178 88 6 27 196 6 165 2.56e-28 119
Msa0812300 AT3G44350.2 38.509 161 94 4 24 179 4 164 3.37e-28 114
Msa0812300 AT1G56010.1 49.138 116 44 3 73 180 1 109 5.05e-28 114
Msa0812300 AT1G02250.1 43.137 153 73 7 26 172 4 148 8.12e-28 115
Msa0812300 AT3G04420.2 35.776 232 120 8 26 245 4 218 3.35e-27 112
Msa0812300 AT3G04420.1 35.776 232 120 8 26 245 4 218 4.18e-27 113
Msa0812300 AT3G44350.1 41.667 132 73 3 24 151 4 135 1.59e-26 106
Msa0812300 AT2G33480.3 47.573 103 54 0 73 175 1 103 8.19e-26 106
Msa0812300 AT1G01010.1 38.650 163 83 4 27 179 5 160 4.12e-25 108
Msa0812300 AT3G10490.4 60.000 80 31 1 99 177 1 80 8.62e-24 103
Msa0812300 AT3G10490.3 60.000 80 31 1 99 177 1 80 8.62e-24 103
Msa0812300 AT1G02220.1 39.073 151 80 4 26 173 4 145 1.41e-22 100
Msa0812300 AT4G28530.2 47.273 110 40 2 24 117 9 116 4.27e-21 95.1
Msa0812300 AT2G18060.2 40.000 110 54 3 106 212 3 103 8.95e-20 90.5
Msa0812300 AT2G43000.2 45.349 86 46 1 91 175 4 89 5.06e-18 83.2
Msa0812300 AT5G64530.2 36.719 128 65 4 25 150 3 116 6.61e-18 81.6
Msa0812300 AT5G22290.2 55.224 67 24 1 106 172 2 62 2.32e-17 82.4
Msa0812300 AT5G64530.1 30.108 186 92 6 25 194 3 166 2.97e-17 80.9
Msa0812300 AT3G04430.1 34.559 136 75 5 31 154 6 139 1.31e-14 73.6
Msa0812300 AT5G14000.2 31.783 129 82 2 24 150 14 138 2.65e-14 71.2
Msa0812300 AT3G55210.1 29.448 163 95 6 25 173 11 167 1.83e-13 71.6
Msa0812300 AT5G14000.1 31.783 129 82 2 24 150 14 138 6.60e-13 68.6
Msa0812300 AT5G50820.1 32.576 132 75 4 24 151 16 137 6.92e-13 68.2
Msa0812300 AT3G56530.1 27.152 151 105 3 25 173 52 199 1.17e-12 69.7
Msa0812300 AT4G28500.1 30.769 156 84 7 15 151 49 199 1.63e-11 66.2

Find 196 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATTGCTTGTTAATATT+TGG 0.124257 5_3:+42264840 Msa0812300:CDS
GCACACTTTCCACCAGAATT+TGG 0.222116 5_3:+42263624 Msa0812300:CDS
ATATGAACAATCGAGGATTT+TGG 0.228322 5_3:+42264418 Msa0812300:CDS
ATGGAAACGGTGATGAAGTT+TGG 0.238292 5_3:+42261667 Msa0812300:CDS
ACCCTCAACGCCTCCTTAAT+TGG 0.238785 5_3:-42264938 None:intergenic
AGTATTGCTTGTTAATATTT+GGG 0.242660 5_3:+42264841 Msa0812300:CDS
TATCTGAGGATGAAGATTAA+TGG 0.254859 5_3:+42261648 Msa0812300:CDS
TCCACCAGAATTTGGCTATC+AGG 0.273763 5_3:+42263632 Msa0812300:CDS
AGGTCAGACTGTATTTCTTC+TGG 0.275801 5_3:-42263208 None:intergenic
TATTTCTTCTGGAGAGTAAT+TGG 0.283362 5_3:-42263197 None:intergenic
TGCCGTTAGGGTTCCGCTTC+CGG 0.296315 5_3:+42261598 Msa0812300:CDS
GTGGAAAGTGTGCATGGGCT+GGG 0.298461 5_3:-42263614 None:intergenic
AAGATAGAGGAACCGGATTT+AGG 0.298716 5_3:-42263228 None:intergenic
TCGATGGCGGCACTGGAATT+AGG 0.299505 5_3:+42264243 Msa0812300:CDS
CTTCCTTGTGCTTGCATCAC+CGG 0.303512 5_3:-42264308 None:intergenic
GGTGGAAAGTGTGCATGGGC+TGG 0.306967 5_3:-42263615 None:intergenic
CACTGAAGAGGTTTGAGAAT+TGG 0.308468 5_3:-42261500 None:intergenic
TGAATCACTGGGTTCATGTT+TGG 0.314659 5_3:-42264494 None:intergenic
CTACCTTGTGCTTGAATCAC+TGG 0.326312 5_3:-42264506 None:intergenic
TGGAAACGGTGATGAAGTTT+GGG 0.329063 5_3:+42261668 Msa0812300:CDS
TGGATAGTGACACTGGTATA+AGG 0.334529 5_3:+42264438 Msa0812300:CDS
CATTTACCACAGTGGTCATT+TGG 0.341009 5_3:-42264187 None:intergenic
TTGAACCGCGCAACAACTAA+TGG 0.350476 5_3:+42262592 Msa0812300:CDS
TTGTTCTTATCCACAAATAT+AGG 0.350678 5_3:-42264968 None:intergenic
CTCAAACCTCTTCAGTGTAA+TGG 0.367345 5_3:+42261506 Msa0812300:exon
TTGGCCTGATAGCCAAATTC+TGG 0.370776 5_3:-42263636 None:intergenic
ATTGCTTCCTCGGAGTTCTC+AGG 0.373613 5_3:-42263292 None:intergenic
AACAATGAATTAATTCAGTA+TGG 0.382424 5_3:+42263657 Msa0812300:CDS
AAGTCTGGTGCTACCTTGAT+TGG 0.382746 5_3:+42262649 Msa0812300:CDS
GGTTGGCTTTCCTATATTTG+TGG 0.386552 5_3:+42264958 Msa0812300:three_prime_UTR
ATACTGAATTAATTCATTGT+TGG 0.391012 5_3:-42263655 None:intergenic
TCAAACCTCTTCAGTGTAAT+GGG 0.393782 5_3:+42261507 Msa0812300:exon
TTTCAACTCGTGTGTTAATT+GGG 0.393985 5_3:+42263707 Msa0812300:CDS
AACAAGCGACAGAGGACATA+TGG 0.406035 5_3:-42263100 None:intergenic
GCCAATTAAGGAGGCGTTGA+GGG 0.414368 5_3:+42264937 Msa0812300:three_prime_UTR
GGGGAGTGATGTTTGTGTTA+AGG 0.415271 5_3:-42261326 None:intergenic
ACTTTCTGTTGGGCAGGGTT+CGG 0.421621 5_3:+42264741 Msa0812300:CDS
TTCCTTGTGCTTGCATCACC+GGG 0.423967 5_3:-42264307 None:intergenic
CAGCGACTCGGATGTGGAAA+TGG 0.427111 5_3:+42263806 Msa0812300:CDS
TGCATATTCTGCCATTGTAA+TGG 0.428587 5_3:+42264811 Msa0812300:CDS
GACATGGGAGATGTCTTCTC+TGG 0.433533 5_3:-42264659 None:intergenic
AGATGAGAGTGGACCTGTCC+AGG 0.434794 5_3:-42262781 None:intergenic
ACTGTTGTCGATGGCGGCAC+TGG 0.435924 5_3:+42264236 Msa0812300:CDS
GGAAGATCAGCTGTTAAACT+TGG 0.436056 5_3:+42263536 Msa0812300:intron
TGCATCACCGGGTTCATGTC+TGG 0.438226 5_3:-42264296 None:intergenic
TATCATTAGAAAGAGTCATC+TGG 0.440631 5_3:-42264157 None:intergenic
TTAATTCAGTATGGTACAAA+CGG 0.441461 5_3:+42263666 Msa0812300:CDS
CTACGCTGGTCGTGCTCCGA+AGG 0.442215 5_3:+42262693 Msa0812300:CDS
TCACTGAACAAGCTGCCGTT+AGG 0.444340 5_3:+42261585 Msa0812300:CDS
TGCCTTTCATCTTCTGTCGC+TGG 0.445612 5_3:-42263256 None:intergenic
GTGGTTCTTCTTCTGTCCAA+TGG 0.448539 5_3:+42262543 Msa0812300:CDS
TTCGGATACTTCCGATCCAT+TGG 0.452190 5_3:-42262559 None:intergenic
TGTTTGTAAATTTGAGCCTT+GGG 0.455207 5_3:+42261707 Msa0812300:CDS
ATATGAGCAAATGTGGAATT+CGG 0.456375 5_3:+42264211 Msa0812300:CDS
AATGTGGGACATTGCTTCCT+CGG 0.456840 5_3:-42263302 None:intergenic
TACAAAAGATGAGAGTTTGC+AGG 0.457897 5_3:+42264589 Msa0812300:CDS
TCTGAGGAGACGACGGAAGA+TGG 0.460186 5_3:+42264380 Msa0812300:CDS
CCTACCTTAAAAGAGCTTGA+TGG 0.460227 5_3:+42262751 Msa0812300:CDS
AGTCTTCTTCATTCCAATCA+AGG 0.464930 5_3:-42262662 None:intergenic
CGAAGGGGAAGAGGACTCAT+TGG 0.465437 5_3:+42262710 Msa0812300:CDS
GTCGTGCTCCGAAGGGGAAG+AGG 0.472177 5_3:+42262701 Msa0812300:CDS
CAATGAGTCCTCTTCCCCTT+CGG 0.474008 5_3:-42262709 None:intergenic
GTCGCAACAAGCGGAGGAGC+TGG 0.476862 5_3:+42261554 Msa0812300:CDS
ATGTTTGTAAATTTGAGCCT+TGG 0.478978 5_3:+42261706 Msa0812300:CDS
TGAACCGCGCAACAACTAAT+GGG 0.482788 5_3:+42262593 Msa0812300:CDS
CAAGCTCCTCGTCGGTAGGC+CGG 0.483643 5_3:-42261617 None:intergenic
ACAGATCTCTCTTGCTGACA+TGG 0.487787 5_3:-42264675 None:intergenic
ACTCTTTCTAATGATAGCAT+TGG 0.489866 5_3:+42264164 Msa0812300:CDS
CACTGAACAAGCTGCCGTTA+GGG 0.490131 5_3:+42261586 Msa0812300:CDS
ACTCCGCAAAATAGTGATGT+AGG 0.490578 5_3:+42264116 Msa0812300:CDS
GAGCTTGATGGCACCAACCC+TGG 0.490651 5_3:+42262763 Msa0812300:CDS
GGTGAGGAAGATAGAGGAAC+CGG 0.491324 5_3:-42263235 None:intergenic
GCGCAACAACTAATGGGTAT+TGG 0.492493 5_3:+42262599 Msa0812300:CDS
TTGTAGATTTATCGATCGTA+AGG 0.496524 5_3:+42262506 Msa0812300:intron
GCCGTGCAGCGACTCGGATG+TGG 0.497897 5_3:+42263800 Msa0812300:CDS
ACGATTTGAGCTTGAGCCAT+GGG 0.499250 5_3:+42263575 Msa0812300:CDS
TTTGAGCCTTGGGATTTGCC+TGG 0.499957 5_3:+42261717 Msa0812300:CDS
AAGACTGATAGACGCCTCAC+TGG 0.500018 5_3:-42263739 None:intergenic
GTGACACTGGTATAAGGATA+AGG 0.500211 5_3:+42264444 Msa0812300:CDS
CCTCGTCGGTAGGCCGGAAG+CGG 0.502257 5_3:-42261611 None:intergenic
CGGTTCAATCTGCTCCCATT+CGG 0.502927 5_3:-42262577 None:intergenic
TACAACTGCAGAATCCAACT+TGG 0.503596 5_3:+42264709 Msa0812300:CDS
CTGAGGAGACGACGGAAGAT+GGG 0.508026 5_3:+42264381 Msa0812300:CDS
GCTGTTACTAACCATCATAT+TGG 0.508994 5_3:-42263829 None:intergenic
TGCACCAAGGAGAATACGAT+TGG 0.510811 5_3:+42264331 Msa0812300:CDS
AGATGAGAGTTTGCAGGAGA+CGG 0.513317 5_3:+42264595 Msa0812300:CDS
TCTTCTTCTGTCCAATGGAT+CGG 0.515035 5_3:+42262548 Msa0812300:CDS
AAAGATCGAAGGATTAAGTC+TGG 0.517270 5_3:+42262634 Msa0812300:CDS
AATACAGTCTGACCTAAATC+CGG 0.519540 5_3:+42263216 Msa0812300:CDS
CCTCCCAATCGTATTCTCCT+TGG 0.520034 5_3:-42264335 None:intergenic
CAAGCATTCCCTTGTTTCCG+AGG 0.521043 5_3:+42264562 Msa0812300:CDS
TACGCTGGTCGTGCTCCGAA+GGG 0.521050 5_3:+42262694 Msa0812300:CDS
GAAGGGGAAGAGGACTCATT+GGG 0.524078 5_3:+42262711 Msa0812300:CDS
TACCTTGTGCTTGAATCACT+GGG 0.526925 5_3:-42264505 None:intergenic
TAATTCAGTATGGTACAAAC+GGG 0.529323 5_3:+42263667 Msa0812300:CDS
TTGTAGTCTCCTCGGAAACA+AGG 0.529566 5_3:-42264571 None:intergenic
CACGATTTGAGCTTGAGCCA+TGG 0.532975 5_3:+42263574 Msa0812300:CDS
AGAAAATAGTGGAAAACAAG+GGG 0.534263 5_3:-42261346 None:intergenic
TTCATCTTCTGTCGCTGGTG+AGG 0.536502 5_3:-42263251 None:intergenic
TGGAAAGTGTGCATGGGCTG+GGG 0.538723 5_3:-42263613 None:intergenic
AGTGATGTGTGAGAAAATAG+TGG 0.539637 5_3:-42261357 None:intergenic
GCCCCGCGTAGAATACGATT+AGG 0.540078 5_3:+42264530 Msa0812300:CDS
TGATGGCACCAACCCTGGAC+AGG 0.541882 5_3:+42262768 Msa0812300:CDS
ATCATTAGAAAGAGTCATCT+GGG 0.542441 5_3:-42264156 None:intergenic
GCGGCACTGGAATTAGGATA+AGG 0.543075 5_3:+42264249 Msa0812300:CDS
TACAATCTTACCTCTGCAGC+CGG 0.543757 5_3:-42263394 None:intergenic
ATTAAGGAGGCGTTGAGGGT+TGG 0.544176 5_3:+42264941 Msa0812300:three_prime_UTR
GTATTGCTTGTTAATATTTG+GGG 0.547201 5_3:+42264842 Msa0812300:CDS
ACAAGCGACAGAGGACATAT+GGG 0.548875 5_3:-42263099 None:intergenic
AATGGGTATTGGAAGGCGAC+AGG 0.549560 5_3:+42262610 Msa0812300:CDS
AGGATGAAGATTAATGGAAA+CGG 0.550978 5_3:+42261654 Msa0812300:CDS
TTGCTTCCTCGGAGTTCTCA+GGG 0.552044 5_3:-42263291 None:intergenic
ATCAGCTGTGGTTATAATGT+GGG 0.552722 5_3:-42263317 None:intergenic
ACATCAGAGTTTAGATGTAC+CGG 0.554540 5_3:+42263375 Msa0812300:CDS
AGTTCTCAGGGATAGCTGCT+AGG 0.556276 5_3:-42263279 None:intergenic
TAAATGAATATGAGCAAATG+TGG 0.557259 5_3:+42264204 Msa0812300:CDS
CTCCTAATCGTATTCTACGC+GGG 0.566860 5_3:-42264532 None:intergenic
AAATGGGCCGTGCAGCGACT+CGG 0.567183 5_3:+42263794 Msa0812300:CDS
AAATTCTACACAGGAATCAT+CGG 0.567363 5_3:-42264893 None:intergenic
TCAACAAGCTCCTCGTCGGT+AGG 0.569226 5_3:-42261621 None:intergenic
CCGTCGTCTCCTCAGAAACA+AGG 0.569989 5_3:-42264373 None:intergenic
GAGAATAACTTATCATCCCA+TGG 0.570032 5_3:-42263591 None:intergenic
ACAACTGCAGAATCCAACTT+GGG 0.570272 5_3:+42264710 Msa0812300:CDS
AATCAGCTGTGGTTATAATG+TGG 0.574900 5_3:-42263318 None:intergenic
CGGCACCCATTACACTGAAG+AGG 0.575329 5_3:-42261512 None:intergenic
GGCCGGAAGCGGAACCCTAA+CGG 0.575633 5_3:-42261600 None:intergenic
TGGATCGGAAGTATCCGAAT+GGG 0.576646 5_3:+42262563 Msa0812300:CDS
TGCGCGTTGCCTTGTTTCTG+AGG 0.578970 5_3:+42264364 Msa0812300:CDS
CAGATCTCTCTTGCTGACAT+GGG 0.580999 5_3:-42264674 None:intergenic
GATGAGAGTGGACCTGTCCA+GGG 0.584499 5_3:-42262780 None:intergenic
GTCGCTGGTGAGGAAGATAG+AGG 0.584757 5_3:-42263241 None:intergenic
TGTGGAAATGGCCAATATGA+TGG 0.586555 5_3:+42263818 Msa0812300:CDS
AGACCGCATCGCGCTAATCG+AGG 0.586661 5_3:-42264780 None:intergenic
TCCTCCGCTTGTTGCGACGA+CGG 0.588388 5_3:-42261549 None:intergenic
TTTAGATGTACCGGCTGCAG+AGG 0.589169 5_3:+42263384 Msa0812300:CDS
TCGGATACTGTTGTCGATGG+CGG 0.589834 5_3:+42264230 Msa0812300:CDS
CTCCGCAAAATAGTGATGTA+GGG 0.592820 5_3:+42264117 Msa0812300:CDS
GGGAGATGTCTTCTCTGGAT+CGG 0.592942 5_3:-42264654 None:intergenic
GCCTGATAGCCAAATTCTGG+TGG 0.593697 5_3:-42263633 None:intergenic
CACCAGCGACAGAAGATGAA+AGG 0.594608 5_3:+42263254 Msa0812300:CDS
GCACCAAGGAGAATACGATT+GGG 0.595669 5_3:+42264332 Msa0812300:CDS
ATTCTGGTGGAAAGTGTGCA+TGG 0.598446 5_3:-42263620 None:intergenic
TCCACATCCGAGTCGCTGCA+CGG 0.599043 5_3:-42263801 None:intergenic
TGAGAAAATAGTGGAAAACA+AGG 0.599803 5_3:-42261348 None:intergenic
AGAGTGGACCTGTCCAGGGT+TGG 0.600613 5_3:-42262776 None:intergenic
CTCTTACCAGGCAAATCCCA+AGG 0.602139 5_3:-42261723 None:intergenic
AACAACTAATGGGTATTGGA+AGG 0.603041 5_3:+42262603 Msa0812300:CDS
AACCCGGTGATGCAAGCACA+AGG 0.605040 5_3:+42264305 Msa0812300:CDS
TTCTGGTGGAAAGTGTGCAT+GGG 0.611417 5_3:-42263619 None:intergenic
TTTATCGATCGTAAGGAACA+AGG 0.615540 5_3:+42262513 Msa0812300:CDS
GGACAGAAGAAGAACCACTC+TGG 0.616496 5_3:-42262538 None:intergenic
AATTCGGATACTGTTGTCGA+TGG 0.617050 5_3:+42264227 Msa0812300:CDS
TGTAGTCTCCTCGGAAACAA+GGG 0.617655 5_3:-42264570 None:intergenic
GGCCAATTAAGGAGGCGTTG+AGG 0.618304 5_3:+42264936 Msa0812300:three_prime_UTR
CCTTGTTTCTGAGGAGACGA+CGG 0.618343 5_3:+42264373 Msa0812300:CDS
ACGCTGGTCGTGCTCCGAAG+GGG 0.619237 5_3:+42262695 Msa0812300:CDS
ATGGCTCAAGCTCAAATCGT+GGG 0.621257 5_3:-42263572 None:intergenic
CCGCTTCCGGCCTACCGACG+AGG 0.622393 5_3:+42261611 Msa0812300:CDS
ATGGATCGGAAGTATCCGAA+TGG 0.622532 5_3:+42262562 Msa0812300:CDS
CCGCGTAGAATACGATTAGG+AGG 0.622604 5_3:+42264533 Msa0812300:CDS
AATACCCATTAGTTGTTGCG+CGG 0.626523 5_3:-42262597 None:intergenic
GCATCACATGATTATCCAGA+GGG 0.629292 5_3:+42264089 Msa0812300:CDS
CATGGCTCAAGCTCAAATCG+TGG 0.630025 5_3:-42263573 None:intergenic
GCAACAAGCGGAGGAGCTGG+CGG 0.630298 5_3:+42261557 Msa0812300:CDS
TTTACCGTCGTCGCAACAAG+CGG 0.632140 5_3:+42261545 Msa0812300:CDS
CAGCACTCTCAGAAGCAGCA+TGG 0.632943 5_3:-42264631 None:intergenic
CTCATATTCATTTACCACAG+TGG 0.633818 5_3:-42264195 None:intergenic
TCCTAATCGTATTCTACGCG+GGG 0.637438 5_3:-42264531 None:intergenic
AAAATCAACAAGCTCCTCGT+CGG 0.639154 5_3:-42261625 None:intergenic
GAGAAAATAGTGGAAAACAA+GGG 0.641867 5_3:-42261347 None:intergenic
GGAGAGTAATTGGCAGTCGT+AGG 0.642617 5_3:-42263187 None:intergenic
CGACGGTAAACACTCAACTA+CGG 0.643070 5_3:-42261532 None:intergenic
AGGCGACAGGAAAAGATCGA+AGG 0.646724 5_3:+42262623 Msa0812300:CDS
CCAAGGAGAATACGATTGGG+AGG 0.651383 5_3:+42264335 Msa0812300:CDS
GCTTCTTAAACAAGCGACAG+AGG 0.652313 5_3:-42263108 None:intergenic
ACCGTCGTCGCAACAAGCGG+AGG 0.653126 5_3:+42261548 Msa0812300:CDS
AAGTTCAAACTGTGGCGAAG+CGG 0.656580 5_3:+42263147 Msa0812300:CDS
TACTAGCGAAACCATTACAA+TGG 0.657140 5_3:-42264822 None:intergenic
AATGGAGACAAATTCTACAC+AGG 0.664136 5_3:-42264902 None:intergenic
TGAACAACCAGACATGAACC+CGG 0.672019 5_3:+42264289 Msa0812300:CDS
CAGCAGAATATGAACAATCG+AGG 0.672727 5_3:+42264411 Msa0812300:CDS
ACACTGGTATAAGGATAAGG+AGG 0.673680 5_3:+42264447 Msa0812300:CDS
AGCATCACATGATTATCCAG+AGG 0.675169 5_3:+42264088 Msa0812300:CDS
AACCCAGTGATTCAAGCACA+AGG 0.683254 5_3:+42264503 Msa0812300:CDS
CCTCCTAATCGTATTCTACG+CGG 0.684086 5_3:-42264533 None:intergenic
CATCCTCGATTAGCGCGATG+CGG 0.693901 5_3:+42264777 Msa0812300:CDS
ATCGCTATAGCAATCAGCTG+TGG 0.699347 5_3:-42263329 None:intergenic
CAACTGCAGAATCCAACTTG+GGG 0.705558 5_3:+42264711 Msa0812300:CDS
TTGGGACGAGTTCTCCAGTG+AGG 0.712013 5_3:+42263725 Msa0812300:CDS
AGTCTTGAAAGTTCAAACTG+TGG 0.713723 5_3:+42263139 Msa0812300:CDS
GAAAATAGTGGAAAACAAGG+GGG 0.717981 5_3:-42261345 None:intergenic
ATTAGGATAAGGTCTAGACA+AGG 0.726784 5_3:+42264260 Msa0812300:CDS
AGCTATCCCTGAGAACTCCG+AGG 0.733615 5_3:+42263285 Msa0812300:CDS
AAGCACAAGGAAGTGCACCA+AGG 0.746045 5_3:+42264318 Msa0812300:CDS
TAAGGAACAAGGATCCAGAG+TGG 0.758355 5_3:+42262524 Msa0812300:CDS
CATTGGCCAAATGACCACTG+TGG 0.781657 5_3:+42264181 Msa0812300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAAAAAATTTGATTTTTAA+AGG + chr5_3:42261957-42261976 Msa0812300:intron 10.0%
!!! AAATTTTATTGTATATATGT+GGG + chr5_3:42263997-42264016 Msa0812300:intron 10.0%
!!! ATTTTTTTTTAGGGATTTTA+GGG - chr5_3:42261480-42261499 None:intergenic 15.0%
!! TTGATATGTAAATTTATAAG+TGG + chr5_3:42261865-42261884 Msa0812300:intron 15.0%
!!! ATTAGTTTTGTTGAAAATTA+GGG + chr5_3:42262070-42262089 Msa0812300:intron 15.0%
!! AAATAAAACATTAAAGGAAA+AGG - chr5_3:42263443-42263462 None:intergenic 15.0%
!! TCATTCAAATAAAACATTAA+AGG - chr5_3:42263449-42263468 None:intergenic 15.0%
!!! ATTTTCTGGAATTTTAAAAA+TGG - chr5_3:42263778-42263797 None:intergenic 15.0%
!!! ATTTTTAAAATTCCAGAAAA+TGG + chr5_3:42263777-42263796 Msa0812300:CDS 15.0%
!!! TTTTTAAAATTCCAGAAAAT+GGG + chr5_3:42263778-42263797 Msa0812300:CDS 15.0%
!! ATACAATAAAATTTGTGTTA+AGG - chr5_3:42263991-42264010 None:intergenic 15.0%
!!! CAAATTTTATTGTATATATG+TGG + chr5_3:42263996-42264015 Msa0812300:intron 15.0%
!!! GATTTTTTTTTAGGGATTTT+AGG - chr5_3:42261481-42261500 None:intergenic 20.0%
!!! GAGAATTGGATTTTTTTTTA+GGG - chr5_3:42261489-42261508 None:intergenic 20.0%
!!! TGAGAATTGGATTTTTTTTT+AGG - chr5_3:42261490-42261509 None:intergenic 20.0%
!!! TTTAACTGTTTCTTGAATTT+AGG + chr5_3:42261758-42261777 Msa0812300:intron 20.0%
!!! TTTTTGTTCTTTTGATGATT+TGG + chr5_3:42261781-42261800 Msa0812300:intron 20.0%
!!! CATTAGTTTTGTTGAAAATT+AGG + chr5_3:42262069-42262088 Msa0812300:intron 20.0%
!!! ATACTAATTTTGGTGAAATT+TGG + chr5_3:42262217-42262236 Msa0812300:intron 20.0%
!!! TACTAATTTTGGTGAAATTT+GGG + chr5_3:42262218-42262237 Msa0812300:intron 20.0%
!!! TTCATAATTTTTGTTGATGA+TGG + chr5_3:42262464-42262483 Msa0812300:intron 20.0%
!! AACCAAACATAAAAAAAAGA+AGG - chr5_3:42262807-42262826 None:intergenic 20.0%
!! ATACTGAATTAATTCATTGT+TGG - chr5_3:42263658-42263677 None:intergenic 20.0%
!! AACAATGAATTAATTCAGTA+TGG + chr5_3:42263657-42263676 Msa0812300:CDS 20.0%
!! TTAAGAACATTAACAGAAAA+AGG - chr5_3:42263944-42263963 None:intergenic 20.0%
!! TCAGATTAAAATTATATCCA+TGG - chr5_3:42264047-42264066 None:intergenic 20.0%
!!! TAGTATTGCTTGTTAATATT+TGG + chr5_3:42264840-42264859 Msa0812300:CDS 20.0%
!!! AGTATTGCTTGTTAATATTT+GGG + chr5_3:42264841-42264860 Msa0812300:CDS 20.0%
! GATAAAAAAAATCTCTTACC+AGG - chr5_3:42261738-42261757 None:intergenic 25.0%
!!! TGATTTTTAAAGGTTAAACG+TGG + chr5_3:42261967-42261986 Msa0812300:intron 25.0%
!!! TTTGATGATTTTGTTGATGA+TGG + chr5_3:42262003-42262022 Msa0812300:intron 25.0%
!!! TTGATGATTTTGTTGATGAT+GGG + chr5_3:42262004-42262023 Msa0812300:intron 25.0%
!!! TTTTGTTGTAAGTTTATCAG+TGG + chr5_3:42262039-42262058 Msa0812300:intron 25.0%
! TAGGGAAAATTAATCTTGAA+TGG + chr5_3:42262088-42262107 Msa0812300:intron 25.0%
! TTTGTCAATAGAAGATTTCA+TGG + chr5_3:42262132-42262151 Msa0812300:intron 25.0%
!! GTAGTAGTGAATACTAATTT+TGG + chr5_3:42262207-42262226 Msa0812300:intron 25.0%
!!! ACTAATTTTGGTGAAATTTG+GGG + chr5_3:42262219-42262238 Msa0812300:intron 25.0%
!! TATTGTTGACTGAAATTTCA+TGG + chr5_3:42262302-42262321 Msa0812300:intron 25.0%
! CACAAAAAATTATTGTTCAG+TGG - chr5_3:42262378-42262397 None:intergenic 25.0%
! TTGTGAGAATTAATTTCGAA+TGG + chr5_3:42262393-42262412 Msa0812300:intron 25.0%
!!! CTCCTTCTTTTTTTTATGTT+TGG + chr5_3:42262802-42262821 Msa0812300:intron 25.0%
! ATTAGTCAAAGACAAGATAA+AGG - chr5_3:42262975-42262994 None:intergenic 25.0%
! TACTTGATGTTAACTATTTC+AGG + chr5_3:42263515-42263534 Msa0812300:intron 25.0%
! TTAATTCAGTATGGTACAAA+CGG + chr5_3:42263666-42263685 Msa0812300:CDS 25.0%
!!! CTGGAATTTTAAAAATGGTA+GGG - chr5_3:42263773-42263792 None:intergenic 25.0%
!!! TCTGGAATTTTAAAAATGGT+AGG - chr5_3:42263774-42263793 None:intergenic 25.0%
! AATGACCAAACCAAAAAAAA+GGG - chr5_3:42263861-42263880 None:intergenic 25.0%
! TAAATGAATATGAGCAAATG+TGG + chr5_3:42264204-42264223 Msa0812300:CDS 25.0%
!! GTATTGCTTGTTAATATTTG+GGG + chr5_3:42264842-42264861 Msa0812300:CDS 25.0%
!!! TTGTCTCCATTACTTTTTTT+TGG + chr5_3:42264914-42264933 Msa0812300:three_prime_UTR 25.0%
!!! TGTCTCCATTACTTTTTTTT+GGG + chr5_3:42264915-42264934 Msa0812300:three_prime_UTR 25.0%
! TTGTTCTTATCCACAAATAT+AGG - chr5_3:42264971-42264990 None:intergenic 25.0%
! TAACCTCAACAAAAATTGAA+CGG - chr5_3:42265039-42265058 None:intergenic 25.0%
! AGAAAATAGTGGAAAACAAG+GGG - chr5_3:42261349-42261368 None:intergenic 30.0%
! GAGAAAATAGTGGAAAACAA+GGG - chr5_3:42261350-42261369 None:intergenic 30.0%
! TGAGAAAATAGTGGAAAACA+AGG - chr5_3:42261351-42261370 None:intergenic 30.0%
!! TTTAGGGATTTTAGGGATTA+GGG - chr5_3:42261473-42261492 None:intergenic 30.0%
!! TTTTAGGGATTTTAGGGATT+AGG - chr5_3:42261474-42261493 None:intergenic 30.0%
!!! AGCTTGTTGATTTTTATCTG+AGG + chr5_3:42261634-42261653 Msa0812300:CDS 30.0%
TATCTGAGGATGAAGATTAA+TGG + chr5_3:42261648-42261667 Msa0812300:CDS 30.0%
AGGATGAAGATTAATGGAAA+CGG + chr5_3:42261654-42261673 Msa0812300:CDS 30.0%
ATGTTTGTAAATTTGAGCCT+TGG + chr5_3:42261706-42261725 Msa0812300:CDS 30.0%
TGTTTGTAAATTTGAGCCTT+GGG + chr5_3:42261707-42261726 Msa0812300:CDS 30.0%
!!! TTTCATGGTTTTGTTGATGA+TGG + chr5_3:42262147-42262166 Msa0812300:intron 30.0%
!!! TTCATGGTTTTGTTGATGAT+GGG + chr5_3:42262148-42262167 Msa0812300:intron 30.0%
!! CTAATTTTGGTGAAATTTGG+GGG + chr5_3:42262220-42262239 Msa0812300:intron 30.0%
! TGGGGGAAATTAATTTTGTA+TGG + chr5_3:42262237-42262256 Msa0812300:intron 30.0%
! TTTTGTATGGTTAGATCATG+TGG + chr5_3:42262250-42262269 Msa0812300:intron 30.0%
!!! TTTCATGGTTTTGTTGATGA+TGG + chr5_3:42262147-42262166 Msa0812300:intron 30.0%
!!! TTCATGGTTTTGTTGATGAT+GGG + chr5_3:42262148-42262167 Msa0812300:intron 30.0%
TTGTAGATTTATCGATCGTA+AGG + chr5_3:42262506-42262525 Msa0812300:intron 30.0%
AAGTGCGTTGAAAACAATTA+TGG - chr5_3:42262926-42262945 None:intergenic 30.0%
ACTGACATCTATAATTGCTT+AGG - chr5_3:42263023-42263042 None:intergenic 30.0%
! ATGTTTCTAACTTCTCTACA+TGG + chr5_3:42263055-42263074 Msa0812300:intron 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG - chr5_3:42263200-42263219 None:intergenic 30.0%
AGTCACTTCAAATCAATAGA+AGG - chr5_3:42263473-42263492 None:intergenic 30.0%
TAATTCAGTATGGTACAAAC+GGG + chr5_3:42263667-42263686 Msa0812300:CDS 30.0%
! TTTTCAACTCGTGTGTTAAT+TGG + chr5_3:42263706-42263725 Msa0812300:CDS 30.0%
TTTCAACTCGTGTGTTAATT+GGG + chr5_3:42263707-42263726 Msa0812300:CDS 30.0%
ATGACCAAACCAAAAAAAAG+GGG - chr5_3:42263860-42263879 None:intergenic 30.0%
GAATGACCAAACCAAAAAAA+AGG - chr5_3:42263862-42263881 None:intergenic 30.0%
! AGCTATGTTTTCTAATACCA+TGG + chr5_3:42264027-42264046 Msa0812300:intron 30.0%
ATCATTAGAAAGAGTCATCT+GGG - chr5_3:42264159-42264178 None:intergenic 30.0%
TATCATTAGAAAGAGTCATC+TGG - chr5_3:42264160-42264179 None:intergenic 30.0%
ACTCTTTCTAATGATAGCAT+TGG + chr5_3:42264164-42264183 Msa0812300:CDS 30.0%
ATATGAGCAAATGTGGAATT+CGG + chr5_3:42264211-42264230 Msa0812300:CDS 30.0%
! ATATGAACAATCGAGGATTT+TGG + chr5_3:42264418-42264437 Msa0812300:CDS 30.0%
AAATTCTACACAGGAATCAT+CGG - chr5_3:42264896-42264915 None:intergenic 30.0%
ATTGGCCCAAAAAAAAGTAA+TGG - chr5_3:42264923-42264942 None:intergenic 30.0%
!!! ACTTTTTTTTGGGCCAATTA+AGG + chr5_3:42264925-42264944 Msa0812300:three_prime_UTR 30.0%
! GAAAATAGTGGAAAACAAGG+GGG - chr5_3:42261348-42261367 None:intergenic 35.0%
AGTGATGTGTGAGAAAATAG+TGG - chr5_3:42261360-42261379 None:intergenic 35.0%
TCAAACCTCTTCAGTGTAAT+GGG + chr5_3:42261507-42261526 Msa0812300:exon 35.0%
!! GTTCTTTTGATGATTTGGAC+TGG + chr5_3:42261786-42261805 Msa0812300:intron 35.0%
!!! GATTTGGACTGGTTTTGATT+TGG + chr5_3:42261797-42261816 Msa0812300:intron 35.0%
!!! TTTTGTTGATGATGGGTTTG+TGG + chr5_3:42262011-42262030 Msa0812300:intron 35.0%
!! TTTGTTGATGATGGGTTTGT+GGG + chr5_3:42262012-42262031 Msa0812300:intron 35.0%
!!! TCATGGTTTTGTTGATGATG+GGG + chr5_3:42262149-42262168 Msa0812300:intron 35.0%
TTTCGAATGGTTAGATCATG+CGG + chr5_3:42262406-42262425 Msa0812300:intron 35.0%
TTTATCGATCGTAAGGAACA+AGG + chr5_3:42262513-42262532 Msa0812300:CDS 35.0%
!! AACAACTAATGGGTATTGGA+AGG + chr5_3:42262603-42262622 Msa0812300:CDS 35.0%
AAAGATCGAAGGATTAAGTC+TGG + chr5_3:42262634-42262653 Msa0812300:CDS 35.0%
AGTCTTCTTCATTCCAATCA+AGG - chr5_3:42262665-42262684 None:intergenic 35.0%
AAAAAAGAAGGAGATGAGAG+TGG - chr5_3:42262795-42262814 None:intergenic 35.0%
AGTCTTGAAAGTTCAAACTG+TGG + chr5_3:42263139-42263158 Msa0812300:CDS 35.0%
AATACAGTCTGACCTAAATC+CGG + chr5_3:42263216-42263235 Msa0812300:CDS 35.0%
ATCAGCTGTGGTTATAATGT+GGG - chr5_3:42263320-42263339 None:intergenic 35.0%
AATCAGCTGTGGTTATAATG+TGG - chr5_3:42263321-42263340 None:intergenic 35.0%
ACATCAGAGTTTAGATGTAC+CGG + chr5_3:42263375-42263394 Msa0812300:CDS 35.0%
GAGAATAACTTATCATCCCA+TGG - chr5_3:42263594-42263613 None:intergenic 35.0%
GCTGTTACTAACCATCATAT+TGG - chr5_3:42263832-42263851 None:intergenic 35.0%
! GTTAGTTTCAGAACACATAG+CGG + chr5_3:42263909-42263928 Msa0812300:intron 35.0%
! GTTAAGGTGTCAATTAGAGA+AGG - chr5_3:42263975-42263994 None:intergenic 35.0%
! AACCCTACATCACTATTTTG+CGG - chr5_3:42264122-42264141 None:intergenic 35.0%
CTCATATTCATTTACCACAG+TGG - chr5_3:42264198-42264217 None:intergenic 35.0%
ATTAGGATAAGGTCTAGACA+AGG + chr5_3:42264260-42264279 Msa0812300:CDS 35.0%
TACAAAAGATGAGAGTTTGC+AGG + chr5_3:42264589-42264608 Msa0812300:CDS 35.0%
TGCATATTCTGCCATTGTAA+TGG + chr5_3:42264811-42264830 Msa0812300:CDS 35.0%
TACTAGCGAAACCATTACAA+TGG - chr5_3:42264825-42264844 None:intergenic 35.0%
AATGGAGACAAATTCTACAC+AGG - chr5_3:42264905-42264924 None:intergenic 35.0%
!!! TTTTTTTGGGCCAATTAAGG+AGG + chr5_3:42264928-42264947 Msa0812300:three_prime_UTR 35.0%
! TCACCGTTCAATTTTTGTTG+AGG + chr5_3:42265033-42265052 Msa0812300:three_prime_UTR 35.0%
CACTGAAGAGGTTTGAGAAT+TGG - chr5_3:42261503-42261522 None:intergenic 40.0%
CTCAAACCTCTTCAGTGTAA+TGG + chr5_3:42261506-42261525 Msa0812300:exon 40.0%
AAAATCAACAAGCTCCTCGT+CGG - chr5_3:42261628-42261647 None:intergenic 40.0%
ATGGAAACGGTGATGAAGTT+TGG + chr5_3:42261667-42261686 Msa0812300:CDS 40.0%
TGGAAACGGTGATGAAGTTT+GGG + chr5_3:42261668-42261687 Msa0812300:CDS 40.0%
!! TTGTTGATGATGGGTTTGTG+GGG + chr5_3:42262013-42262032 Msa0812300:intron 40.0%
!! TTTGTTGATGATGGGGTTTG+TGG + chr5_3:42262156-42262175 Msa0812300:intron 40.0%
!! TTGTTGATGATGGGGTTTGT+GGG + chr5_3:42262157-42262176 Msa0812300:intron 40.0%
ATGGTTAGATCATGTGGTTG+TGG + chr5_3:42262256-42262275 Msa0812300:intron 40.0%
!! TTGTTGATGATGGGTTTGTG+TGG + chr5_3:42262013-42262032 Msa0812300:intron 40.0%
ATGGTTAGATCATGCGGTTA+TGG + chr5_3:42262412-42262431 Msa0812300:intron 40.0%
TCTTCTTCTGTCCAATGGAT+CGG + chr5_3:42262548-42262567 Msa0812300:CDS 40.0%
AATACCCATTAGTTGTTGCG+CGG - chr5_3:42262600-42262619 None:intergenic 40.0%
!!! AAGACTCTTGTTTTCTACGC+TGG + chr5_3:42262679-42262698 Msa0812300:CDS 40.0%
!!! CCATCAAGCTCTTTTAAGGT+AGG - chr5_3:42262754-42262773 None:intergenic 40.0%
CCTACCTTAAAAGAGCTTGA+TGG + chr5_3:42262751-42262770 Msa0812300:CDS 40.0%
AGGTCAGACTGTATTTCTTC+TGG - chr5_3:42263211-42263230 None:intergenic 40.0%
AAGATAGAGGAACCGGATTT+AGG - chr5_3:42263231-42263250 None:intergenic 40.0%
GGAAGATCAGCTGTTAAACT+TGG + chr5_3:42263536-42263555 Msa0812300:intron 40.0%
TGTGGAAATGGCCAATATGA+TGG + chr5_3:42263818-42263837 Msa0812300:CDS 40.0%
!!! CTGACCCCTTTTTTTTGGTT+TGG + chr5_3:42263853-42263872 Msa0812300:intron 40.0%
AGCATCACATGATTATCCAG+AGG + chr5_3:42264088-42264107 Msa0812300:CDS 40.0%
GCATCACATGATTATCCAGA+GGG + chr5_3:42264089-42264108 Msa0812300:CDS 40.0%
ACTCCGCAAAATAGTGATGT+AGG + chr5_3:42264116-42264135 Msa0812300:CDS 40.0%
CTCCGCAAAATAGTGATGTA+GGG + chr5_3:42264117-42264136 Msa0812300:CDS 40.0%
CATTTACCACAGTGGTCATT+TGG - chr5_3:42264190-42264209 None:intergenic 40.0%
AATTCGGATACTGTTGTCGA+TGG + chr5_3:42264227-42264246 Msa0812300:CDS 40.0%
CAGCAGAATATGAACAATCG+AGG + chr5_3:42264411-42264430 Msa0812300:CDS 40.0%
! AGGATTTTGGATAGTGACAC+TGG + chr5_3:42264431-42264450 Msa0812300:CDS 40.0%
TGGATAGTGACACTGGTATA+AGG + chr5_3:42264438-42264457 Msa0812300:CDS 40.0%
GTGACACTGGTATAAGGATA+AGG + chr5_3:42264444-42264463 Msa0812300:CDS 40.0%
ACACTGGTATAAGGATAAGG+AGG + chr5_3:42264447-42264466 Msa0812300:CDS 40.0%
TGAATCACTGGGTTCATGTT+TGG - chr5_3:42264497-42264516 None:intergenic 40.0%
TACCTTGTGCTTGAATCACT+GGG - chr5_3:42264508-42264527 None:intergenic 40.0%
! CTCATCTTTTGTAGTCTCCT+CGG - chr5_3:42264582-42264601 None:intergenic 40.0%
TACAACTGCAGAATCCAACT+TGG + chr5_3:42264709-42264728 Msa0812300:CDS 40.0%
ACAACTGCAGAATCCAACTT+GGG + chr5_3:42264710-42264729 Msa0812300:CDS 40.0%
!! AAAGTTTTTCGACCCCAAGT+TGG - chr5_3:42264726-42264745 None:intergenic 40.0%
GGGTCGAAAAACTTTCTGTT+GGG + chr5_3:42264731-42264750 Msa0812300:CDS 40.0%
GAAAAACTTTCTGTTGGGCA+GGG + chr5_3:42264736-42264755 Msa0812300:CDS 40.0%
!! GGTTGGCTTTCCTATATTTG+TGG + chr5_3:42264958-42264977 Msa0812300:three_prime_UTR 40.0%
GGGGAGTGATGTTTGTGTTA+AGG - chr5_3:42261329-42261348 None:intergenic 45.0%
CGACGGTAAACACTCAACTA+CGG - chr5_3:42261535-42261554 None:intergenic 45.0%
!! TGTTGATGATGGGTTTGTGG+GGG + chr5_3:42262014-42262033 Msa0812300:intron 45.0%
!! TGTTGATGATGGGGTTTGTG+GGG + chr5_3:42262158-42262177 Msa0812300:intron 45.0%
TAAGGAACAAGGATCCAGAG+TGG + chr5_3:42262524-42262543 Msa0812300:CDS 45.0%
GTGGTTCTTCTTCTGTCCAA+TGG + chr5_3:42262543-42262562 Msa0812300:CDS 45.0%
TTCGGATACTTCCGATCCAT+TGG - chr5_3:42262562-42262581 None:intergenic 45.0%
!! ATGGATCGGAAGTATCCGAA+TGG + chr5_3:42262562-42262581 Msa0812300:CDS 45.0%
!! TGGATCGGAAGTATCCGAAT+GGG + chr5_3:42262563-42262582 Msa0812300:CDS 45.0%
TTGAACCGCGCAACAACTAA+TGG + chr5_3:42262592-42262611 Msa0812300:CDS 45.0%
TGAACCGCGCAACAACTAAT+GGG + chr5_3:42262593-42262612 Msa0812300:CDS 45.0%
! GCGCAACAACTAATGGGTAT+TGG + chr5_3:42262599-42262618 Msa0812300:CDS 45.0%
!! AAGTCTGGTGCTACCTTGAT+TGG + chr5_3:42262649-42262668 Msa0812300:CDS 45.0%
!! GGTGCCATCAAGCTCTTTTA+AGG - chr5_3:42262758-42262777 None:intergenic 45.0%
! GATAAAGGTACGCAGAGTTG+TGG - chr5_3:42262960-42262979 None:intergenic 45.0%
ACAAGCGACAGAGGACATAT+GGG - chr5_3:42263102-42263121 None:intergenic 45.0%
AACAAGCGACAGAGGACATA+TGG - chr5_3:42263103-42263122 None:intergenic 45.0%
GCTTCTTAAACAAGCGACAG+AGG - chr5_3:42263111-42263130 None:intergenic 45.0%
AAGTTCAAACTGTGGCGAAG+CGG + chr5_3:42263147-42263166 Msa0812300:CDS 45.0%
AATGTGGGACATTGCTTCCT+CGG - chr5_3:42263305-42263324 None:intergenic 45.0%
ATCGCTATAGCAATCAGCTG+TGG - chr5_3:42263332-42263351 None:intergenic 45.0%
TACAATCTTACCTCTGCAGC+CGG - chr5_3:42263397-42263416 None:intergenic 45.0%
ATGGCTCAAGCTCAAATCGT+GGG - chr5_3:42263575-42263594 None:intergenic 45.0%
ACGATTTGAGCTTGAGCCAT+GGG + chr5_3:42263575-42263594 Msa0812300:CDS 45.0%
! TTCTGGTGGAAAGTGTGCAT+GGG - chr5_3:42263622-42263641 None:intergenic 45.0%
! ATTCTGGTGGAAAGTGTGCA+TGG - chr5_3:42263623-42263642 None:intergenic 45.0%
GCACACTTTCCACCAGAATT+TGG + chr5_3:42263624-42263643 Msa0812300:CDS 45.0%
TCCACCAGAATTTGGCTATC+AGG + chr5_3:42263632-42263651 Msa0812300:CDS 45.0%
TTGGCCTGATAGCCAAATTC+TGG - chr5_3:42263639-42263658 None:intergenic 45.0%
!!! CAGCTCTGACCCCTTTTTTT+TGG + chr5_3:42263848-42263867 Msa0812300:intron 45.0%
TGAACAACCAGACATGAACC+CGG + chr5_3:42264289-42264308 Msa0812300:CDS 45.0%
TGCACCAAGGAGAATACGAT+TGG + chr5_3:42264331-42264350 Msa0812300:CDS 45.0%
GCACCAAGGAGAATACGATT+GGG + chr5_3:42264332-42264351 Msa0812300:CDS 45.0%
AACCCAGTGATTCAAGCACA+AGG + chr5_3:42264503-42264522 Msa0812300:CDS 45.0%
CTACCTTGTGCTTGAATCAC+TGG - chr5_3:42264509-42264528 None:intergenic 45.0%
TCCTAATCGTATTCTACGCG+GGG - chr5_3:42264534-42264553 None:intergenic 45.0%
CTCCTAATCGTATTCTACGC+GGG - chr5_3:42264535-42264554 None:intergenic 45.0%
CCTCCTAATCGTATTCTACG+CGG - chr5_3:42264536-42264555 None:intergenic 45.0%
TGTAGTCTCCTCGGAAACAA+GGG - chr5_3:42264573-42264592 None:intergenic 45.0%
TTGTAGTCTCCTCGGAAACA+AGG - chr5_3:42264574-42264593 None:intergenic 45.0%
AGATGAGAGTTTGCAGGAGA+CGG + chr5_3:42264595-42264614 Msa0812300:CDS 45.0%
CAGATCTCTCTTGCTGACAT+GGG - chr5_3:42264677-42264696 None:intergenic 45.0%
ACAGATCTCTCTTGCTGACA+TGG - chr5_3:42264678-42264697 None:intergenic 45.0%
CAACTGCAGAATCCAACTTG+GGG + chr5_3:42264711-42264730 Msa0812300:CDS 45.0%
GGGGTCGAAAAACTTTCTGT+TGG + chr5_3:42264730-42264749 Msa0812300:CDS 45.0%
CGAAAAACTTTCTGTTGGGC+AGG + chr5_3:42264735-42264754 Msa0812300:CDS 45.0%
TTTACCGTCGTCGCAACAAG+CGG + chr5_3:42261545-42261564 Msa0812300:CDS 50.0%
TCACTGAACAAGCTGCCGTT+AGG + chr5_3:42261585-42261604 Msa0812300:CDS 50.0%
CACTGAACAAGCTGCCGTTA+GGG + chr5_3:42261586-42261605 Msa0812300:CDS 50.0%
TTTGAGCCTTGGGATTTGCC+TGG + chr5_3:42261717-42261736 Msa0812300:CDS 50.0%
CTCTTACCAGGCAAATCCCA+AGG - chr5_3:42261726-42261745 None:intergenic 50.0%
!! GTTGATGATGGGGTTTGTGG+GGG + chr5_3:42262159-42262178 Msa0812300:intron 50.0%
GGACAGAAGAAGAACCACTC+TGG - chr5_3:42262541-42262560 None:intergenic 50.0%
CGGTTCAATCTGCTCCCATT+CGG - chr5_3:42262580-42262599 None:intergenic 50.0%
!! AATGGGTATTGGAAGGCGAC+AGG + chr5_3:42262610-42262629 Msa0812300:CDS 50.0%
AGGCGACAGGAAAAGATCGA+AGG + chr5_3:42262623-42262642 Msa0812300:CDS 50.0%
CAATGAGTCCTCTTCCCCTT+CGG - chr5_3:42262712-42262731 None:intergenic 50.0%
GAAGGGGAAGAGGACTCATT+GGG + chr5_3:42262711-42262730 Msa0812300:CDS 50.0%
GCTGACTGAGTCAATGATGC+TGG + chr5_3:42262853-42262872 Msa0812300:intron 50.0%
GACAGAGGACATATGGGTTC+TGG - chr5_3:42263096-42263115 None:intergenic 50.0%
GGAGAGTAATTGGCAGTCGT+AGG - chr5_3:42263190-42263209 None:intergenic 50.0%
GGTGAGGAAGATAGAGGAAC+CGG - chr5_3:42263238-42263257 None:intergenic 50.0%
TTCATCTTCTGTCGCTGGTG+AGG - chr5_3:42263254-42263273 None:intergenic 50.0%
CACCAGCGACAGAAGATGAA+AGG + chr5_3:42263254-42263273 Msa0812300:CDS 50.0%
TGCCTTTCATCTTCTGTCGC+TGG - chr5_3:42263259-42263278 None:intergenic 50.0%
AGTTCTCAGGGATAGCTGCT+AGG - chr5_3:42263282-42263301 None:intergenic 50.0%
TTGCTTCCTCGGAGTTCTCA+GGG - chr5_3:42263294-42263313 None:intergenic 50.0%
ATTGCTTCCTCGGAGTTCTC+AGG - chr5_3:42263295-42263314 None:intergenic 50.0%
!! TTTAGATGTACCGGCTGCAG+AGG + chr5_3:42263384-42263403 Msa0812300:CDS 50.0%
CATGGCTCAAGCTCAAATCG+TGG - chr5_3:42263576-42263595 None:intergenic 50.0%
CACGATTTGAGCTTGAGCCA+TGG + chr5_3:42263574-42263593 Msa0812300:CDS 50.0%
GCCTGATAGCCAAATTCTGG+TGG - chr5_3:42263636-42263655 None:intergenic 50.0%
AAGACTGATAGACGCCTCAC+TGG - chr5_3:42263742-42263761 None:intergenic 50.0%
CATTGGCCAAATGACCACTG+TGG + chr5_3:42264181-42264200 Msa0812300:CDS 50.0%
TCGGATACTGTTGTCGATGG+CGG + chr5_3:42264230-42264249 Msa0812300:CDS 50.0%
! GCGGCACTGGAATTAGGATA+AGG + chr5_3:42264249-42264268 Msa0812300:CDS 50.0%
TTCCTTGTGCTTGCATCACC+GGG - chr5_3:42264310-42264329 None:intergenic 50.0%
CTTCCTTGTGCTTGCATCAC+CGG - chr5_3:42264311-42264330 None:intergenic 50.0%
! AAGCACAAGGAAGTGCACCA+AGG + chr5_3:42264318-42264337 Msa0812300:CDS 50.0%
CCTCCCAATCGTATTCTCCT+TGG - chr5_3:42264338-42264357 None:intergenic 50.0%
CCAAGGAGAATACGATTGGG+AGG + chr5_3:42264335-42264354 Msa0812300:CDS 50.0%
!! CCTTGTTTCTGAGGAGACGA+CGG + chr5_3:42264373-42264392 Msa0812300:CDS 50.0%
CCGCGTAGAATACGATTAGG+AGG + chr5_3:42264533-42264552 Msa0812300:CDS 50.0%
! CAAGCATTCCCTTGTTTCCG+AGG + chr5_3:42264562-42264581 Msa0812300:CDS 50.0%
GGGAGATGTCTTCTCTGGAT+CGG - chr5_3:42264657-42264676 None:intergenic 50.0%
GACATGGGAGATGTCTTCTC+TGG - chr5_3:42264662-42264681 None:intergenic 50.0%
ACTTTCTGTTGGGCAGGGTT+CGG + chr5_3:42264741-42264760 Msa0812300:CDS 50.0%
!! GCCAATTAAGGAGGCGTTGA+GGG + chr5_3:42264937-42264956 Msa0812300:three_prime_UTR 50.0%
ACCCTCAACGCCTCCTTAAT+TGG - chr5_3:42264941-42264960 None:intergenic 50.0%
!! ATTAAGGAGGCGTTGAGGGT+TGG + chr5_3:42264941-42264960 Msa0812300:three_prime_UTR 50.0%
CGGCACCCATTACACTGAAG+AGG - chr5_3:42261515-42261534 None:intergenic 55.0%
TCAACAAGCTCCTCGTCGGT+AGG - chr5_3:42261624-42261643 None:intergenic 55.0%
CGAAGGGGAAGAGGACTCAT+TGG + chr5_3:42262710-42262729 Msa0812300:CDS 55.0%
GATGAGAGTGGACCTGTCCA+GGG - chr5_3:42262783-42262802 None:intergenic 55.0%
AGATGAGAGTGGACCTGTCC+AGG - chr5_3:42262784-42262803 None:intergenic 55.0%
GTCGCTGGTGAGGAAGATAG+AGG - chr5_3:42263244-42263263 None:intergenic 55.0%
AGCTATCCCTGAGAACTCCG+AGG + chr5_3:42263285-42263304 Msa0812300:CDS 55.0%
! TGGAAAGTGTGCATGGGCTG+GGG - chr5_3:42263616-42263635 None:intergenic 55.0%
! GTGGAAAGTGTGCATGGGCT+GGG - chr5_3:42263617-42263636 None:intergenic 55.0%
TTGGGACGAGTTCTCCAGTG+AGG + chr5_3:42263725-42263744 Msa0812300:CDS 55.0%
! CAGCGACTCGGATGTGGAAA+TGG + chr5_3:42263806-42263825 Msa0812300:CDS 55.0%
! TTTTGCGGAGTCACTCCCTC+TGG - chr5_3:42264107-42264126 None:intergenic 55.0%
! TCGATGGCGGCACTGGAATT+AGG + chr5_3:42264243-42264262 Msa0812300:CDS 55.0%
TGCATCACCGGGTTCATGTC+TGG - chr5_3:42264299-42264318 None:intergenic 55.0%
AACCCGGTGATGCAAGCACA+AGG + chr5_3:42264305-42264324 Msa0812300:CDS 55.0%
!! TGCGCGTTGCCTTGTTTCTG+AGG + chr5_3:42264364-42264383 Msa0812300:CDS 55.0%
CCGTCGTCTCCTCAGAAACA+AGG - chr5_3:42264376-42264395 None:intergenic 55.0%
TCTGAGGAGACGACGGAAGA+TGG + chr5_3:42264380-42264399 Msa0812300:CDS 55.0%
CTGAGGAGACGACGGAAGAT+GGG + chr5_3:42264381-42264400 Msa0812300:CDS 55.0%
GCCCCGCGTAGAATACGATT+AGG + chr5_3:42264530-42264549 Msa0812300:CDS 55.0%
CAGCACTCTCAGAAGCAGCA+TGG - chr5_3:42264634-42264653 None:intergenic 55.0%
CATCCTCGATTAGCGCGATG+CGG + chr5_3:42264777-42264796 Msa0812300:CDS 55.0%
!! GGCCAATTAAGGAGGCGTTG+AGG + chr5_3:42264936-42264955 Msa0812300:three_prime_UTR 55.0%
! TCCTCCGCTTGTTGCGACGA+CGG - chr5_3:42261552-42261571 None:intergenic 60.0%
TGCCGTTAGGGTTCCGCTTC+CGG + chr5_3:42261598-42261617 Msa0812300:CDS 60.0%
!! GATGATGGGGTTTGTGGGGG+TGG + chr5_3:42262162-42262181 Msa0812300:intron 60.0%
ATGGGGTTTGTGGGGGTGGA+GGG + chr5_3:42262166-42262185 Msa0812300:intron 60.0%
!! GGGGGTGGAGGGTTTGTTGT+AGG + chr5_3:42262177-42262196 Msa0812300:intron 60.0%
TACGCTGGTCGTGCTCCGAA+GGG + chr5_3:42262694-42262713 Msa0812300:CDS 60.0%
! GAGCTTGATGGCACCAACCC+TGG + chr5_3:42262763-42262782 Msa0812300:CDS 60.0%
TGATGGCACCAACCCTGGAC+AGG + chr5_3:42262768-42262787 Msa0812300:CDS 60.0%
AGAGTGGACCTGTCCAGGGT+TGG - chr5_3:42262779-42262798 None:intergenic 60.0%
! GGTGGAAAGTGTGCATGGGC+TGG - chr5_3:42263618-42263637 None:intergenic 60.0%
! TCGCTGCACGGCCCATTTTC+TGG - chr5_3:42263792-42263811 None:intergenic 60.0%
AAATGGGCCGTGCAGCGACT+CGG + chr5_3:42263794-42263813 Msa0812300:CDS 60.0%
TCCACATCCGAGTCGCTGCA+CGG - chr5_3:42263804-42263823 None:intergenic 60.0%
! ACTGTTGTCGATGGCGGCAC+TGG + chr5_3:42264236-42264255 Msa0812300:CDS 60.0%
AGACCGCATCGCGCTAATCG+AGG - chr5_3:42264783-42264802 None:intergenic 60.0%
ACCGTCGTCGCAACAAGCGG+AGG + chr5_3:42261548-42261567 Msa0812300:CDS 65.0%
GTCGCAACAAGCGGAGGAGC+TGG + chr5_3:42261554-42261573 Msa0812300:CDS 65.0%
GCAACAAGCGGAGGAGCTGG+CGG + chr5_3:42261557-42261576 Msa0812300:CDS 65.0%
GGCCGGAAGCGGAACCCTAA+CGG - chr5_3:42261603-42261622 None:intergenic 65.0%
CAAGCTCCTCGTCGGTAGGC+CGG - chr5_3:42261620-42261639 None:intergenic 65.0%
GATGGGGTTTGTGGGGGTGG+AGG + chr5_3:42262165-42262184 Msa0812300:intron 65.0%
CTACGCTGGTCGTGCTCCGA+AGG + chr5_3:42262693-42262712 Msa0812300:CDS 65.0%
ACGCTGGTCGTGCTCCGAAG+GGG + chr5_3:42262695-42262714 Msa0812300:CDS 65.0%
GTCGTGCTCCGAAGGGGAAG+AGG + chr5_3:42262701-42262720 Msa0812300:CDS 65.0%
CCTCGTCGGTAGGCCGGAAG+CGG - chr5_3:42261614-42261633 None:intergenic 70.0%
! GCCGTGCAGCGACTCGGATG+TGG + chr5_3:42263800-42263819 Msa0812300:CDS 70.0%
CCGCTTCCGGCCTACCGACG+AGG + chr5_3:42261611-42261630 Msa0812300:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 42261321 42265070 42261321 ID=Msa0812300;Name=Msa0812300
chr5_3 mRNA 42261321 42265070 42261321 ID=Msa0812300-mRNA-1;Parent=Msa0812300;Name=Msa0812300-mRNA-1;_AED=0.03;_eAED=0.03;_QI=204|1|1|1|1|1|5|178|638
chr5_3 exon 42261321 42261738 42261321 ID=Msa0812300-mRNA-1:exon:12968;Parent=Msa0812300-mRNA-1
chr5_3 exon 42262512 42262789 42262512 ID=Msa0812300-mRNA-1:exon:12969;Parent=Msa0812300-mRNA-1
chr5_3 exon 42263097 42263405 42263097 ID=Msa0812300-mRNA-1:exon:12970;Parent=Msa0812300-mRNA-1
chr5_3 exon 42263537 42263839 42263537 ID=Msa0812300-mRNA-1:exon:12971;Parent=Msa0812300-mRNA-1
chr5_3 exon 42264080 42265070 42264080 ID=Msa0812300-mRNA-1:exon:12972;Parent=Msa0812300-mRNA-1
chr5_3 five_prime_UTR 42261321 42261524 42261321 ID=Msa0812300-mRNA-1:five_prime_utr;Parent=Msa0812300-mRNA-1
chr5_3 CDS 42261525 42261738 42261525 ID=Msa0812300-mRNA-1:cds;Parent=Msa0812300-mRNA-1
chr5_3 CDS 42262512 42262789 42262512 ID=Msa0812300-mRNA-1:cds;Parent=Msa0812300-mRNA-1
chr5_3 CDS 42263097 42263405 42263097 ID=Msa0812300-mRNA-1:cds;Parent=Msa0812300-mRNA-1
chr5_3 CDS 42263537 42263839 42263537 ID=Msa0812300-mRNA-1:cds;Parent=Msa0812300-mRNA-1
chr5_3 CDS 42264080 42264892 42264080 ID=Msa0812300-mRNA-1:cds;Parent=Msa0812300-mRNA-1
chr5_3 three_prime_UTR 42264893 42265070 42264893 ID=Msa0812300-mRNA-1:three_prime_utr;Parent=Msa0812300-mRNA-1
Gene Sequence

>Msa0812300

ATGGGTGCCGTAGTTGAGTGTTTACCGTCGTCGCAACAAGCGGAGGAGCTGGCGGTTCTGTCACTGAACAAGCTGCCGTTAGGGTTCCGCTTCCGGCCTACCGACGAGGAGCTTGTTGATTTTTATCTGAGGATGAAGATTAATGGAAACGGTGATGAAGTTTGGGTTATTCGTGAAGTTGATGTTTGTAAATTTGAGCCTTGGGATTTGCCTGATTTATCGATCGTAAGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCAATGGATCGGAAGTATCCGAATGGGAGCAGATTGAACCGCGCAACAACTAATGGGTATTGGAAGGCGACAGGAAAAGATCGAAGGATTAAGTCTGGTGCTACCTTGATTGGAATGAAGAAGACTCTTGTTTTCTACGCTGGTCGTGCTCCGAAGGGGAAGAGGACTCATTGGGTTATGCATGAGTATAGACCTACCTTAAAAGAGCTTGATGGCACCAACCCTGGACAGAACCCATATGTCCTCTGTCGCTTGTTTAAGAAGCATGATGAGAGTCTTGAAAGTTCAAACTGTGGCGAAGCGGAGCAGACTACTTCAACTCCTACGACTGCCAATTACTCTCCAGAAGAAATACAGTCTGACCTAAATCCGGTTCCTCTATCTTCCTCACCAGCGACAGAAGATGAAAGGCACCTAGCAGCTATCCCTGAGAACTCCGAGGAAGCAATGTCCCACATTATAACCACAGCTGATTGCTATAGCGATGCATGTAATGCTTCTGATGCACAACATCAGAGTTTAGATGTACCGGCTGCAGAGGAAGATCAGCTGTTAAACTTGGACATATTTGATAGCCCACGATTTGAGCTTGAGCCATGGGATGATAAGTTATTCTCCCCAGCCCATGCACACTTTCCACCAGAATTTGGCTATCAGGCCAACAATGAATTAATTCAGTATGGTACAAACGGGACAGATGTTTCAGACTTTTTCAACTCGTGTGTTAATTGGGACGAGTTCTCCAGTGAGGCGTCTATCAGTCTTGATCTGAGCCCTACCATTTTTAAAATTCCAGAAAATGGGCCGTGCAGCGACTCGGATGTGGAAATGGCCAATATGATGAATCTGCTAGCATCACATGATTATCCAGAGGGAGTGACTCCGCAAAATAGTGATGTAGGGTTGTTTCAGAACAATTCCCAGATGACTCTTTCTAATGATAGCATTGGCCAAATGACCACTGTGGTAAATGAATATGAGCAAATGTGGAATTCGGATACTGTTGTCGATGGCGGCACTGGAATTAGGATAAGGTCTAGACAAGGACAAAGTGAACAACCAGACATGAACCCGGTGATGCAAGCACAAGGAAGTGCACCAAGGAGAATACGATTGGGAGGATTTGTTGCGCGTTGCCTTGTTTCTGAGGAGACGACGGAAGATGGGAGTCGTGCAGCAGAATATGAACAATCGAGGATTTTGGATAGTGACACTGGTATAAGGATAAGGAGGACTCGACAAAGAAGAAATGAAGAGCCAAACATGAACCCAGTGATTCAAGCACAAGGTAGTGCCCCGCGTAGAATACGATTAGGAGGATTTGTCAAGCATTCCCTTGTTTCCGAGGAGACTACAAAAGATGAGAGTTTGCAGGAGACGGAAGCTTCAGAAAACCATGCTGCTTCTGAGAGTGCTGCCGATCCAGAGAAGACATCTCCCATGTCAGCAAGAGAGATCTGTGAGCAACATGTTACAACTGCAGAATCCAACTTGGGGTCGAAAAACTTTCTGTTGGGCAGGGTTCGGTGCACTTCAAAGACATCCTCGATTAGCGCGATGCGGTCTACTGTTCTTGCATATTCTGCCATTGTAATGGTTTCGCTAGTATTGCTTGTTAATATTTGGGGATATCTTAGATTTAGAAATGCTTACTAG
Protein sequence

>Msa0812300

MGAVVECLPSSQQAEELAVLSLNKLPLGFRFRPTDEELVDFYLRMKINGNGDEVWVIREVDVCKFEPWDLPDLSIVRNKDPEWFFFCPMDRKYPNGSRLNRATTNGYWKATGKDRRIKSGATLIGMKKTLVFYAGRAPKGKRTHWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDESLESSNCGEAEQTTSTPTTANYSPEEIQSDLNPVPLSSSPATEDERHLAAIPENSEEAMSHIITTADCYSDACNASDAQHQSLDVPAAEEDQLLNLDIFDSPRFELEPWDDKLFSPAHAHFPPEFGYQANNELIQYGTNGTDVSDFFNSCVNWDEFSSEASISLDLSPTIFKIPENGPCSDSDVEMANMMNLLASHDYPEGVTPQNSDVGLFQNNSQMTLSNDSIGQMTTVVNEYEQMWNSDTVVDGGTGIRIRSRQGQSEQPDMNPVMQAQGSAPRRIRLGGFVARCLVSEETTEDGSRAAEYEQSRILDSDTGIRIRRTRQRRNEEPNMNPVIQAQGSAPRRIRLGGFVKHSLVSEETTKDESLQETEASENHAASESAADPEKTSPMSAREICEQHVTTAESNLGSKNFLLGRVRCTSKTSSISAMRSTVLAYSAIVMVSLVLLVNIWGYLRFRNAY*