AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0813070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813070 MtrunA17_Chr5g0430321 99.002 501 5 0 1 501 1 501 0.0 1028
Msa0813070 MtrunA17_Chr3g0105191 77.426 505 109 2 1 501 1 504 0.0 793
Msa0813070 MtrunA17_Chr4g0048041 76.327 452 107 0 50 501 92 543 0.0 748
Msa0813070 MtrunA17_Chr4g0022591 39.037 374 203 9 15 375 11 372 1.31e-75 248
Msa0813070 MtrunA17_Chr4g0022591 36.957 138 73 4 373 501 445 577 2.70e-15 78.6
Msa0813070 MtrunA17_Chr2g0281111 41.796 323 175 7 63 375 51 370 5.21e-74 244
Msa0813070 MtrunA17_Chr2g0281111 36.667 120 67 2 386 501 464 578 5.46e-13 71.2
Msa0813070 MtrunA17_Chr4g0048381 41.176 323 177 7 63 375 51 370 4.44e-73 242
Msa0813070 MtrunA17_Chr4g0048381 35.833 120 68 2 386 501 464 578 1.90e-12 69.7
Msa0813070 MtrunA17_Chr4g0022601 40.179 336 179 8 53 375 38 364 8.43e-71 236
Msa0813070 MtrunA17_Chr4g0022601 33.058 121 72 2 385 501 454 569 7.16e-11 64.7
Msa0813070 MtrunA17_Chr8g0384841 25.328 458 285 14 62 490 83 512 1.47e-16 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813070 AT2G29990.1 77.453 479 98 1 33 501 30 508 0.0 764
Msa0813070 AT1G07180.1 75.000 484 106 1 33 501 27 510 0.0 748
Msa0813070 AT4G28220.2 40.184 326 175 8 67 379 52 370 4.55e-73 240
Msa0813070 AT4G28220.1 40.184 326 175 8 67 379 52 370 1.72e-72 240
Msa0813070 AT4G28220.1 36.066 122 67 3 385 501 456 571 2.06e-12 70.1
Msa0813070 AT4G21490.1 37.958 382 221 7 29 397 15 393 2.63e-69 232
Msa0813070 AT4G21490.2 37.958 382 220 7 29 397 15 392 3.56e-69 232
Msa0813070 AT4G05020.1 39.722 360 197 8 32 375 18 373 1.29e-66 225
Msa0813070 AT4G05020.1 34.167 120 70 2 386 501 468 582 3.49e-11 66.2
Msa0813070 AT4G05020.2 39.722 360 197 8 32 375 18 373 2.88e-66 225
Msa0813070 AT2G20800.1 36.740 362 201 7 61 413 60 402 1.42e-61 212
Msa0813070 AT2G20800.1 36.364 121 68 2 385 501 467 582 3.10e-13 72.4

Find 162 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAATAGGTTTACGCTCTT+TGG 0.195195 5_3:-43564728 None:intergenic
AACCTTCCACCAGGAGATTT+AGG 0.197104 5_3:-43563336 None:intergenic
TGAGAAGGGTTGGTCGAGTA+TGG 0.228859 5_3:-43558953 None:intergenic
GGAGCACAACCCACCACTTT+TGG 0.268489 5_3:+43562366 Msa0813070:CDS
GATTCTATGTAGCTATTAAC+TGG 0.277448 5_3:+43564617 Msa0813070:CDS
GGGTTGCTGGTTTGGTCTAC+TGG 0.293963 5_3:+43563276 Msa0813070:CDS
GGAACTGTACTTGTTCAATT+TGG 0.297617 5_3:+43564862 Msa0813070:three_prime_UTR
TTACAAGCACCTTGGAAGTA+TGG 0.310701 5_3:+43564293 Msa0813070:CDS
TTCCATACGGGTTGCTGGTT+TGG 0.312770 5_3:+43563268 Msa0813070:CDS
ATCCCATCAGCCCACATCTT+TGG 0.320147 5_3:+43558811 Msa0813070:five_prime_UTR
ACACATCAAGATTCAACTTT+AGG 0.324481 5_3:+43564987 Msa0813070:intron
ACCTTCCACCAGGAGATTTA+GGG 0.336747 5_3:-43563335 None:intergenic
TGATTTGGATGCAGGGATTT+CGG 0.349898 5_3:+43562559 Msa0813070:intron
GATAATGTCACCAACTTTGT+TGG 0.350078 5_3:-43558760 None:intergenic
TGAGGTTCCATACGGGTTGC+TGG 0.353242 5_3:+43563263 Msa0813070:CDS
AAGAGGAAGGCAATAAAATA+TGG 0.365704 5_3:+43564931 Msa0813070:three_prime_UTR
GATAAGTTAGTAATTGCATT+AGG 0.372684 5_3:+43562345 Msa0813070:CDS
TTCAATTTGGTAGAAATTGT+TGG 0.380197 5_3:+43564875 Msa0813070:three_prime_UTR
GTTGATATAAACATGAAAAC+TGG 0.381268 5_3:-43565042 None:intergenic
AGATCCAGCGAGTGGATAAA+AGG 0.389977 5_3:-43563312 None:intergenic
ATAGGAGATTGTAAACTTCC+AGG 0.395776 5_3:-43562322 None:intergenic
CGCGTGGTGGTTCTCGGCAC+TGG 0.400851 5_3:+43559085 Msa0813070:CDS
AAGCCACGCGTGGTGGTTCT+CGG 0.403632 5_3:+43559079 Msa0813070:CDS
GTACAAGATATCTTCTCAAT+AGG 0.408338 5_3:+43563662 Msa0813070:CDS
CTGGTTTGGTCTACTGGAGT+TGG 0.418407 5_3:+43563282 Msa0813070:CDS
GCTGTCTGCACGGCCTCCAT+TGG 0.418506 5_3:-43564238 None:intergenic
TAAAGCTCACCTTTGTCAAC+TGG 0.420834 5_3:-43563041 None:intergenic
TTCTTCCTTGCTAATTGTAC+CGG 0.423214 5_3:+43559298 Msa0813070:CDS
GTTCTCGGCACTGGTTGGGC+CGG 0.427151 5_3:+43559094 Msa0813070:CDS
GCGAACCGGAGCGGTTGAAC+CGG 0.430398 5_3:-43559023 None:intergenic
GAGAGAGAAGAGTGAGAGAT+GGG 0.434356 5_3:-43558982 None:intergenic
TTGATGATGTCTGACGTTCC+AGG 0.436902 5_3:+43562471 Msa0813070:CDS
TGCAATTACTAACTTATCAT+AGG 0.442331 5_3:-43562340 None:intergenic
GGATGCAGGGATTTCGGAAG+AGG 0.444020 5_3:+43562565 Msa0813070:intron
CCTACGGGAGTTGAATTTAG+TGG 0.445405 5_3:+43562629 Msa0813070:CDS
CGCTTCTCCACTTCAACACC+CGG 0.450000 5_3:+43559004 Msa0813070:CDS
TAGTCAATTTCTTTATTTGA+GGG 0.450473 5_3:-43565168 None:intergenic
GAGAAGGGTTGGTCGAGTAT+GGG 0.450487 5_3:-43558952 None:intergenic
AGAGATGGGAAGAGGTGAGA+AGG 0.451443 5_3:-43558968 None:intergenic
ATCTAACTCGTGTCATTAGC+TGG 0.452596 5_3:+43564587 Msa0813070:CDS
TATCCATGTTACTTTGATTG+AGG 0.453761 5_3:+43562712 Msa0813070:CDS
GGTGGTTCTCGGCACTGGTT+GGG 0.457628 5_3:+43559090 Msa0813070:CDS
GAAGAGTGAGAGATGGGAAG+AGG 0.457738 5_3:-43558976 None:intergenic
CGAGAGAGAAGAGTGAGAGA+TGG 0.463439 5_3:-43558983 None:intergenic
TGGGAAGAGGTGAGAAGGGT+TGG 0.465709 5_3:-43558963 None:intergenic
GCAGGTTGAATCCTAGCAAC+AGG 0.465923 5_3:-43559250 None:intergenic
CCAGGTTCTTTGGAAATAGC+AGG 0.466685 5_3:-43559268 None:intergenic
GAGATGGGAAGAGGTGAGAA+GGG 0.471329 5_3:-43558967 None:intergenic
TGAGTGGCTTCGTGTTCCTT+CGG 0.474068 5_3:+43563640 Msa0813070:CDS
CTTCCTTTGATGACCGACTT+AGG 0.474188 5_3:+43563004 Msa0813070:CDS
AGAAGGGTTGGTCGAGTATG+GGG 0.474380 5_3:-43558951 None:intergenic
CCGGTTCGCTATGCGGCTCT+CGG 0.474842 5_3:+43559037 Msa0813070:CDS
CCGAGAGCCGCATAGCGAAC+CGG 0.477016 5_3:-43559037 None:intergenic
TGGTGGTTCTCGGCACTGGT+TGG 0.477298 5_3:+43559089 Msa0813070:CDS
ATGCAGATTCATGAAAGGAT+TGG 0.478927 5_3:+43559117 Msa0813070:CDS
CACTGTGTGGTTGTCGGAGG+TGG 0.479951 5_3:+43562605 Msa0813070:CDS
TCCTTTCATGAATCTGCATC+CGG 0.482533 5_3:-43559113 None:intergenic
GAACACAGACACTGGATCCC+TGG 0.485336 5_3:+43562304 Msa0813070:CDS
TTCATATTCTGCTTATATCA+CGG 0.485820 5_3:-43564660 None:intergenic
ATAATGTCACCAACTTTGTT+GGG 0.485842 5_3:-43558759 None:intergenic
TTTCTCCTACAGGATGCAAA+AGG 0.488236 5_3:+43564517 Msa0813070:intron
GGCTTCTCGTGTGGTTTGGT+TGG 0.489674 5_3:-43559061 None:intergenic
GTTGTCGGAGGTGGTCCTAC+GGG 0.490066 5_3:+43562614 Msa0813070:CDS
CACCTTTGTCAACTGGTTGG+TGG 0.490675 5_3:-43563034 None:intergenic
GCGTGGCTTCTCGTGTGGTT+TGG 0.494416 5_3:-43559065 None:intergenic
AAAGGAAGACAATATCTCAT+TGG 0.494833 5_3:-43562989 None:intergenic
GTAGTCAATTTCTTTATTTG+AGG 0.494902 5_3:-43565169 None:intergenic
CTGGATCTCCCTAAATCTCC+TGG 0.496340 5_3:+43563327 Msa0813070:CDS
AACACCCGGTTCAACCGCTC+CGG 0.500329 5_3:+43559018 Msa0813070:CDS
CAGTTGGTTTGTTTGGCGCT+CGG 0.501757 5_3:+43564561 Msa0813070:CDS
AAAGATGTGGGCTGATGGGA+TGG 0.504385 5_3:-43558809 None:intergenic
CTGTTACACTGTGTGGTTGT+CGG 0.506874 5_3:+43562599 Msa0813070:CDS
TAGGTAAAATACTTTCAGAA+TGG 0.507423 5_3:+43564693 Msa0813070:three_prime_UTR
TCGTGAAGTTTACCATGCAC+AGG 0.511255 5_3:+43562422 Msa0813070:CDS
AGTGGATTTGTTGAAAGTAC+CGG 0.512050 5_3:+43563692 Msa0813070:CDS
GGTTGTCGGAGGTGGTCCTA+CGG 0.516435 5_3:+43562613 Msa0813070:CDS
GCAAAAGGATTGTCTCTGGC+AGG 0.518641 5_3:+43564532 Msa0813070:CDS
GGATGCAAAAGGATTGTCTC+TGG 0.519221 5_3:+43564528 Msa0813070:intron
ACCACGCGTGGCTTCTCGTG+TGG 0.520725 5_3:-43559070 None:intergenic
CAGTTTGTTTACAAGCACCT+TGG 0.525860 5_3:+43564285 Msa0813070:CDS
CCTGCTATTTCCAAAGAACC+TGG 0.527740 5_3:+43559268 Msa0813070:CDS
TTTCGGAAGAGGAGAAGAAA+AGG 0.527798 5_3:+43562576 Msa0813070:CDS
AGAAATTGTTGGCACTTGAA+AGG 0.531295 5_3:+43564886 Msa0813070:three_prime_UTR
AGCATGAAAGATATAGACTT+GGG 0.533211 5_3:+43564258 Msa0813070:CDS
GAAGGGTTGGTCGAGTATGG+GGG 0.533667 5_3:-43558950 None:intergenic
AAAGTTACTTGGGCAAGAGC+AGG 0.534602 5_3:-43563728 None:intergenic
ATGTTTATCAGCATTGATAC+CGG 0.534978 5_3:-43559317 None:intergenic
GACAAGCAGCCCAACAAAGT+TGG 0.536797 5_3:+43558750 Msa0813070:five_prime_UTR
GCAGCCTTGTTAAACAAAGT+AGG 0.539948 5_3:+43564210 Msa0813070:CDS
GAAATGATGTTCCAAAGATG+TGG 0.541458 5_3:-43558822 None:intergenic
CTGTTGCTGAACCTGTTGCT+AGG 0.543077 5_3:+43559239 Msa0813070:CDS
GTTCCAAAGATGTGGGCTGA+TGG 0.543718 5_3:-43558814 None:intergenic
TGGGCAAGAGCAGGAAGTGT+TGG 0.544735 5_3:-43563719 None:intergenic
TCAGGAGTGCGACTTGTTCG+AGG 0.547733 5_3:+43563192 Msa0813070:CDS
CTTGGAAGTATGGCAACTGT+TGG 0.548211 5_3:+43564303 Msa0813070:CDS
CGAACCGGAGCGGTTGAACC+GGG 0.549006 5_3:-43559022 None:intergenic
CAGCATGAAAGATATAGACT+TGG 0.550417 5_3:+43564257 Msa0813070:CDS
GGGTTTGAAAAGTTGTTTCG+TGG 0.553703 5_3:-43558930 None:intergenic
TGTATCCCCGCGTAATCACA+TGG 0.555108 5_3:+43559165 Msa0813070:CDS
TAGGAGATTGTAAACTTCCA+GGG 0.555838 5_3:-43562321 None:intergenic
AACTCCATGAATTCCAAAAG+TGG 0.557244 5_3:-43562379 None:intergenic
AAAAGATAGCTTGAAGAGGA+AGG 0.567409 5_3:+43564918 Msa0813070:three_prime_UTR
TCCATGAATTCCAAAAGTGG+TGG 0.567774 5_3:-43562376 None:intergenic
TTCACCTACTTTGTTTAACA+AGG 0.568346 5_3:-43564214 None:intergenic
TTCCAAAGATGTGGGCTGAT+GGG 0.570109 5_3:-43558813 None:intergenic
AAAATACTTTCAGAATGGCT+AGG 0.571658 5_3:+43564698 Msa0813070:three_prime_UTR
AACTGAAGGAACACAGACAC+TGG 0.572704 5_3:+43562296 Msa0813070:CDS
TATCTTTCATGCTGTCTGCA+CGG 0.573160 5_3:-43564248 None:intergenic
CAACAGTTGCCATACTTCCA+AGG 0.573364 5_3:-43564302 None:intergenic
GACCAAACCAGCAACCCGTA+TGG 0.575517 5_3:-43563270 None:intergenic
TCCCTAAATCTCCTGGTGGA+AGG 0.576208 5_3:+43563334 Msa0813070:CDS
GTGCCTAAGTCGGTCATCAA+AGG 0.577551 5_3:-43563007 None:intergenic
CGTCAGACATCATCAAATTG+AGG 0.578854 5_3:-43562464 None:intergenic
TGCGACGAATTTCCTGTGCA+TGG 0.580363 5_3:-43562434 None:intergenic
AAATTACCTTGTTCTGTCTG+AGG 0.582764 5_3:-43564347 None:intergenic
ACAGGATTGGTATTGATGAG+TGG 0.585206 5_3:+43563624 Msa0813070:intron
GATGGTACTGAGGTTCCATA+CGG 0.585400 5_3:+43563255 Msa0813070:CDS
GGCAACTGTTGGAAGTTACA+AGG 0.589456 5_3:+43564314 Msa0813070:CDS
ACACAAGTAGAAGCCAAAAG+AGG 0.590268 5_3:-43559196 None:intergenic
AGCGAGTGGATAAAAGGTGA+TGG 0.590313 5_3:-43563306 None:intergenic
GCCGGATGCAGATTCATGAA+AGG 0.593084 5_3:+43559112 Msa0813070:CDS
GGTTGAACCGGGTGTTGAAG+TGG 0.593883 5_3:-43559011 None:intergenic
CCATGAATTCCAAAAGTGGT+GGG 0.610117 5_3:-43562375 None:intergenic
AGTAGACCTCAGACAGAACA+AGG 0.610589 5_3:+43564341 Msa0813070:CDS
ACTCAAAAGATAGCTTGAAG+AGG 0.611367 5_3:+43564914 Msa0813070:three_prime_UTR
GAGAAGATATCTTGTACCGA+AGG 0.620961 5_3:-43563656 None:intergenic
GCTCACCTTTGTCAACTGGT+TGG 0.622023 5_3:-43563037 None:intergenic
TGGTGGCGTAGTGCCTAAGT+CGG 0.622821 5_3:-43563017 None:intergenic
AAGATGTGGGCTGATGGGAT+GGG 0.625600 5_3:-43558808 None:intergenic
ACACGAGAAGCCACGCGTGG+TGG 0.626869 5_3:+43559072 Msa0813070:CDS
TGAAAACCATGTGATTACGC+GGG 0.630073 5_3:-43559171 None:intergenic
AACAAAGTAGGTGAAGCCAA+TGG 0.630315 5_3:+43564222 Msa0813070:CDS
TGATACCGGTACAATTAGCA+AGG 0.631909 5_3:-43559303 None:intergenic
ACATGAAAACTGGTTTGTTG+TGG 0.632516 5_3:-43565032 None:intergenic
CGCCACCAACCAGTTGACAA+AGG 0.632644 5_3:+43563032 Msa0813070:CDS
CCACTAAATTCAACTCCCGT+AGG 0.634013 5_3:-43562629 None:intergenic
TCAGAGATATGCTCATGTGA+AGG 0.636417 5_3:+43562685 Msa0813070:CDS
ATGGTACTGAGGTTCCATAC+GGG 0.637112 5_3:+43563256 Msa0813070:CDS
AACCGCTCCGGTTCGCTATG+CGG 0.638944 5_3:+43559030 Msa0813070:CDS
CCACAGGTAGCAGAGAGACA+AGG 0.641757 5_3:+43564177 Msa0813070:intron
TTCTCAATAGGTGACTGCAG+TGG 0.644093 5_3:+43563674 Msa0813070:CDS
GTGCCGAGAACCACCACGCG+TGG 0.644427 5_3:-43559082 None:intergenic
CAATGTGAGACTGTAACTGA+AGG 0.645608 5_3:+43562282 Msa0813070:CDS
ATTTAGGGAGATCCAGCGAG+TGG 0.654814 5_3:-43563320 None:intergenic
GTGAAAACCATGTGATTACG+CGG 0.655602 5_3:-43559172 None:intergenic
TATCAATGCTGATAAACATG+AGG 0.659278 5_3:+43559321 Msa0813070:CDS
TATACTTAACGATGGTACTG+AGG 0.661927 5_3:+43563245 Msa0813070:CDS
ACCACACGAGAAGCCACGCG+TGG 0.664281 5_3:+43559069 Msa0813070:CDS
AAAGTAGGTGAAGCCAATGG+AGG 0.673473 5_3:+43564225 Msa0813070:CDS
AGCCGCATAGCGAACCGGAG+CGG 0.675373 5_3:-43559032 None:intergenic
GAAAACCATGTGATTACGCG+GGG 0.676500 5_3:-43559170 None:intergenic
TTACACTGTGTGGTTGTCGG+AGG 0.678237 5_3:+43562602 Msa0813070:CDS
TTCTAGTTAGCTGAACAACA+AGG 0.678547 5_3:+43564841 Msa0813070:three_prime_UTR
GAGTAAACAAACCTTCCACC+AGG 0.679279 5_3:-43563345 None:intergenic
AAGAAGATTATACTTAACGA+TGG 0.679351 5_3:+43563237 Msa0813070:CDS
GAAAAGGCTGTTACACTGTG+TGG 0.679820 5_3:+43562592 Msa0813070:CDS
AAATGATGTTCCAAAGATGT+GGG 0.680820 5_3:-43558821 None:intergenic
ATTCTATGTAGCTATTAACT+GGG 0.685511 5_3:+43564618 Msa0813070:CDS
ATACCTCAATCAAAGTAACA+TGG 0.690821 5_3:-43562715 None:intergenic
GCATGAAAGATATAGACTTG+GGG 0.694188 5_3:+43564259 Msa0813070:CDS
GATCTCCCTAAATCTCCTGG+TGG 0.696100 5_3:+43563330 Msa0813070:CDS
TAACTCGTGTCATTAGCTGG+AGG 0.697962 5_3:+43564590 Msa0813070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTCATTTTTGT+AGG + chr5_3:43561216-43561235 Msa0813070:intron 10.0%
!!! TTTTTTTTTTCATTTTTGTA+GGG + chr5_3:43561217-43561236 Msa0813070:intron 10.0%
!!! GATAAAAAAAAGTATATATT+TGG - chr5_3:43563499-43563518 None:intergenic 10.0%
!!! TTTTTCTCTTTTCAATTTTA+TGG + chr5_3:43559414-43559433 Msa0813070:intron 15.0%
!! TTGGTTTAAAAAAAAAACAA+GGG - chr5_3:43560312-43560331 None:intergenic 15.0%
!! AACTAAATGAAATTTATTTG+AGG + chr5_3:43561124-43561143 Msa0813070:intron 15.0%
!! TTACAATTCTTATGAAAAAT+AGG + chr5_3:43562088-43562107 Msa0813070:intron 15.0%
!! TACAATTCTTATGAAAAATA+GGG + chr5_3:43562089-43562108 Msa0813070:intron 15.0%
!! AATTCATTGTGATAATAAAA+TGG + chr5_3:43562836-43562855 Msa0813070:intron 15.0%
!! CTGTGAAAAAAAAAAAAAAT+TGG - chr5_3:43562929-43562948 None:intergenic 15.0%
!! GAATATGAAGAAAAAAAATT+AGG + chr5_3:43564674-43564693 Msa0813070:exon 15.0%
!! GTATTGTATCTAAACTTATT+TGG + chr5_3:43559361-43559380 Msa0813070:intron 20.0%
!!! TTTCAATTTTATGGCTTATA+TGG + chr5_3:43559423-43559442 Msa0813070:intron 20.0%
!! AGGTTTGAATTAAATTGTAA+CGG + chr5_3:43559495-43559514 Msa0813070:intron 20.0%
!!! GTTTTATATAAACAAAACTG+AGG + chr5_3:43559958-43559977 Msa0813070:intron 20.0%
!! CTTGGTTTAAAAAAAAAACA+AGG - chr5_3:43560313-43560332 None:intergenic 20.0%
!!! CTTGTTTTTTTTTTAAACCA+AGG + chr5_3:43560311-43560330 Msa0813070:intron 20.0%
!! TTTCTCTTAAAATGAAATAG+CGG + chr5_3:43560346-43560365 Msa0813070:intron 20.0%
!! AATTAGCAATTAACTAATCA+AGG + chr5_3:43560522-43560541 Msa0813070:intron 20.0%
!! TAATAAGAATGATAAGTAGT+TGG + chr5_3:43560843-43560862 Msa0813070:intron 20.0%
!! TGAAAATTGAAACCATTAAA+AGG + chr5_3:43561149-43561168 Msa0813070:intron 20.0%
!! TATGAAAATGAATTTCCATT+GGG - chr5_3:43561345-43561364 None:intergenic 20.0%
!! ATATGAAAATGAATTTCCAT+TGG - chr5_3:43561346-43561365 None:intergenic 20.0%
!! TTACAAATTTACCACAAAAT+TGG - chr5_3:43562889-43562908 None:intergenic 20.0%
!! ATATGGATACATATAGTATT+CGG + chr5_3:43563439-43563458 Msa0813070:intron 20.0%
!! GTGTTGAAACATAATATATT+TGG - chr5_3:43563528-43563547 None:intergenic 20.0%
!! AATAAATTGAAAACAGCTTA+TGG - chr5_3:43563971-43563990 None:intergenic 20.0%
!! TTTATCTCTTATGATAGAAA+TGG + chr5_3:43564058-43564077 Msa0813070:intron 20.0%
!! AACTTAATTAAGCACTTATA+AGG - chr5_3:43564117-43564136 None:intergenic 20.0%
!! ATTAAGTTAATTATCCAAAC+AGG + chr5_3:43564129-43564148 Msa0813070:intron 20.0%
!! TTAAGTTAATTATCCAAACA+GGG + chr5_3:43564130-43564149 Msa0813070:intron 20.0%
!! ATAAAATGTCACAACTAAAT+AGG - chr5_3:43564745-43564764 None:intergenic 20.0%
!!! TCATTATTATTTTTGCTTGA+TGG - chr5_3:43565074-43565093 None:intergenic 20.0%
!!! CATTATTTTGAACATACAAT+TGG - chr5_3:43565105-43565124 None:intergenic 20.0%
!!! TAGTCAATTTCTTTATTTGA+GGG - chr5_3:43565171-43565190 None:intergenic 20.0%
! AAAAAAATCAAACACCTCTT+AGG - chr5_3:43559399-43559418 None:intergenic 25.0%
! TTATATGGTTTAGTTATGGT+TGG + chr5_3:43559438-43559457 Msa0813070:intron 25.0%
! TGTTTCAATGAGTAATTTCA+AGG - chr5_3:43559693-43559712 None:intergenic 25.0%
! ATTGAAACATTGTGAATTCT+TGG + chr5_3:43559704-43559723 Msa0813070:intron 25.0%
! AGAAAATACAAAATTGTCCT+TGG - chr5_3:43560331-43560350 None:intergenic 25.0%
! CTAATTCTGATTCTTAGATT+TGG - chr5_3:43560508-43560527 None:intergenic 25.0%
! CTGAGCTTTACAAAAAAAAA+AGG + chr5_3:43560740-43560759 Msa0813070:intron 25.0%
!! TGATTTTTGTCTCAAACTTT+AGG + chr5_3:43560776-43560795 Msa0813070:intron 25.0%
! TAAATCCTCAATACATAGTT+TGG - chr5_3:43560991-43561010 None:intergenic 25.0%
!!! CATTAAAAGGTACCTTATTT+GGG + chr5_3:43561162-43561181 Msa0813070:intron 25.0%
! TAAATTCCAAATCCCAAATA+AGG - chr5_3:43561177-43561196 None:intergenic 25.0%
! ATGAAAATGAATTTCCATTG+GGG - chr5_3:43561344-43561363 None:intergenic 25.0%
! TATTCTTATTAGAAACTGAG+AGG + chr5_3:43561624-43561643 Msa0813070:intron 25.0%
! AAATCAGAATGGAATATACA+AGG - chr5_3:43561711-43561730 None:intergenic 25.0%
! CAATATATTCTTAATAGCCT+AGG + chr5_3:43561855-43561874 Msa0813070:intron 25.0%
! ATAACAGTGTTATAAAAACC+AGG - chr5_3:43562132-43562151 None:intergenic 25.0%
! TGCAATTACTAACTTATCAT+AGG - chr5_3:43562343-43562362 None:intergenic 25.0%
! GATAAGTTAGTAATTGCATT+AGG + chr5_3:43562345-43562364 Msa0813070:CDS 25.0%
!!! AAGCATTATTTTTCAAACAC+AGG - chr5_3:43562511-43562530 None:intergenic 25.0%
! AAATCAGTTACAGATTACAA+AGG - chr5_3:43562545-43562564 None:intergenic 25.0%
! TTTGTAATCTGTAACTGATT+TGG + chr5_3:43562544-43562563 Msa0813070:intron 25.0%
! AATAGATTATACACATGTTG+TGG + chr5_3:43562769-43562788 Msa0813070:intron 25.0%
!!! ACTTTTTTCGTGATATTCAT+AGG - chr5_3:43563119-43563138 None:intergenic 25.0%
! CATATTGAACAAACAGTAAA+GGG - chr5_3:43563142-43563161 None:intergenic 25.0%
! ACATATTGAACAAACAGTAA+AGG - chr5_3:43563143-43563162 None:intergenic 25.0%
! AAGAAGATTATACTTAACGA+TGG + chr5_3:43563237-43563256 Msa0813070:CDS 25.0%
!!! TTGCATTTATTTTCTTTCCA+TGG + chr5_3:43563378-43563397 Msa0813070:intron 25.0%
! TCAAGAAATGAAAGTTACTT+GGG - chr5_3:43563741-43563760 None:intergenic 25.0%
! TTCAAGAAATGAAAGTTACT+TGG - chr5_3:43563742-43563761 None:intergenic 25.0%
!!! TTTGGTTTTAGTTTAACACT+AGG + chr5_3:43563780-43563799 Msa0813070:intron 25.0%
!!! TTGGTTTTAGTTTAACACTA+GGG + chr5_3:43563781-43563800 Msa0813070:intron 25.0%
! AAACTTATTCATGTCAACTT+AGG + chr5_3:43563894-43563913 Msa0813070:intron 25.0%
! AACTTATTCATGTCAACTTA+GGG + chr5_3:43563895-43563914 Msa0813070:intron 25.0%
!!! TTTTTAAAAGCACCAACAAA+AGG - chr5_3:43564472-43564491 None:intergenic 25.0%
! ATTCTATGTAGCTATTAACT+GGG + chr5_3:43564618-43564637 Msa0813070:CDS 25.0%
! TTCATATTCTGCTTATATCA+CGG - chr5_3:43564663-43564682 None:intergenic 25.0%
! TAGGTAAAATACTTTCAGAA+TGG + chr5_3:43564693-43564712 Msa0813070:three_prime_UTR 25.0%
! TTCAATTTGGTAGAAATTGT+TGG + chr5_3:43564875-43564894 Msa0813070:three_prime_UTR 25.0%
! GTTGATATAAACATGAAAAC+TGG - chr5_3:43565045-43565064 None:intergenic 25.0%
!! GTAGTCAATTTCTTTATTTG+AGG - chr5_3:43565172-43565191 None:intergenic 25.0%
ATAATGTCACCAACTTTGTT+GGG - chr5_3:43558762-43558781 None:intergenic 30.0%
AAATGATGTTCCAAAGATGT+GGG - chr5_3:43558824-43558843 None:intergenic 30.0%
! GAGGTTTTTAAACAAAGACA+TGG - chr5_3:43558891-43558910 None:intergenic 30.0%
!! TGAAGAAGTAACTTTTTGAG+AGG - chr5_3:43558910-43558929 None:intergenic 30.0%
!! ATGTTTATCAGCATTGATAC+CGG - chr5_3:43559320-43559339 None:intergenic 30.0%
TATCAATGCTGATAAACATG+AGG + chr5_3:43559321-43559340 Msa0813070:CDS 30.0%
TGGCTTATATGGTTTAGTTA+TGG + chr5_3:43559434-43559453 Msa0813070:intron 30.0%
AGTTATGGTTGGAGAAAAAA+CGG + chr5_3:43559449-43559468 Msa0813070:intron 30.0%
!! TTTTAGAGATCTCATTGACT+AGG + chr5_3:43559475-43559494 Msa0813070:intron 30.0%
TAACGGAGTAAATTGTCATT+TGG + chr5_3:43559512-43559531 Msa0813070:intron 30.0%
! AACGGAGTAAATTGTCATTT+GGG + chr5_3:43559513-43559532 Msa0813070:intron 30.0%
!! GGGTTCTTCAATATTTTAGA+CGG + chr5_3:43559533-43559552 Msa0813070:intron 30.0%
!! GTGTCTTTTGTTTGTCAATT+TGG + chr5_3:43559666-43559685 Msa0813070:intron 30.0%
AAACATTGTGAATTCTTGGT+TGG + chr5_3:43559708-43559727 Msa0813070:intron 30.0%
! ACTTTACAAGTTTCGTTTTG+AGG + chr5_3:43559815-43559834 Msa0813070:intron 30.0%
TATCCGCTATTAACTACTAT+GGG - chr5_3:43559853-43559872 None:intergenic 30.0%
TTATGCTCTCTATGAAATAG+CGG - chr5_3:43559934-43559953 None:intergenic 30.0%
! CTATTTCATAGAGAGCATAA+TGG + chr5_3:43559934-43559953 Msa0813070:intron 30.0%
AACTCGAACAAAAAAGTAAC+AGG + chr5_3:43560051-43560070 Msa0813070:intron 30.0%
TCTTTCATTCTTACGCAAAA+CGG - chr5_3:43560239-43560258 None:intergenic 30.0%
! TTTTGCGTAAGAATGAAAGA+AGG + chr5_3:43560239-43560258 Msa0813070:intron 30.0%
TTAGGTTCAATTCCTATGTT+GGG + chr5_3:43560620-43560639 Msa0813070:intron 30.0%
ATGTTAATGTGACTATGATG+TGG + chr5_3:43560886-43560905 Msa0813070:intron 30.0%
!! CCAAATAAGGTACCTTTTAA+TGG - chr5_3:43561164-43561183 None:intergenic 30.0%
!! CCATTAAAAGGTACCTTATT+TGG + chr5_3:43561161-43561180 Msa0813070:intron 30.0%
ATGCTTGGTTATTGTTGTAT+TGG + chr5_3:43561282-43561301 Msa0813070:intron 30.0%
AACCCAAATGACTATTTACT+CGG - chr5_3:43561385-43561404 None:intergenic 30.0%
GGGTTGTTTAATATGTCTAA+TGG + chr5_3:43561400-43561419 Msa0813070:intron 30.0%
!! TTGCTAGTCAGTTTGTTAAA+TGG + chr5_3:43561448-43561467 Msa0813070:intron 30.0%
!! TGCTAGTCAGTTTGTTAAAT+GGG + chr5_3:43561449-43561468 Msa0813070:intron 30.0%
TACTCTTATGCAAATCAGAA+TGG - chr5_3:43561722-43561741 None:intergenic 30.0%
GAATTCTGTTACAGTATTGT+TGG - chr5_3:43561806-43561825 None:intergenic 30.0%
TGTAACAGAATTCTGACTTT+GGG + chr5_3:43561813-43561832 Msa0813070:intron 30.0%
TAACTAAACTGCCAAGAAAT+AGG - chr5_3:43561963-43561982 None:intergenic 30.0%
TATTTCTTGGCAGTTTAGTT+AGG + chr5_3:43561962-43561981 Msa0813070:intron 30.0%
CAATTTATTCATGTCTCTTC+AGG + chr5_3:43562966-43562985 Msa0813070:intron 30.0%
AAAGGAAGACAATATCTCAT+TGG - chr5_3:43562992-43563011 None:intergenic 30.0%
AGCAATTTCAACATAACGAA+AGG - chr5_3:43563167-43563186 None:intergenic 30.0%
ACCGTTGCAAAATTTACAAT+TGG + chr5_3:43563404-43563423 Msa0813070:intron 30.0%
! GCCAATTGTAAATTTTGCAA+CGG - chr5_3:43563408-43563427 None:intergenic 30.0%
ATCTGTATTATCATGAAAGC+AGG + chr5_3:43563462-43563481 Msa0813070:intron 30.0%
GTACAAGATATCTTCTCAAT+AGG + chr5_3:43563662-43563681 Msa0813070:CDS 30.0%
! AATGTGTTACTCTCTTTACT+TGG + chr5_3:43563837-43563856 Msa0813070:intron 30.0%
!! ATGAATAAGTTTTCAGGCAA+AGG - chr5_3:43563886-43563905 None:intergenic 30.0%
! GTTGACATGAATAAGTTTTC+AGG - chr5_3:43563892-43563911 None:intergenic 30.0%
ATTCAAGTGGGAATACATTA+AGG - chr5_3:43564156-43564175 None:intergenic 30.0%
! TTCACCTACTTTGTTTAACA+AGG - chr5_3:43564217-43564236 None:intergenic 30.0%
AGCATGAAAGATATAGACTT+GGG + chr5_3:43564258-43564277 Msa0813070:CDS 30.0%
! ATCATTCCTTAACCTTTTGT+TGG + chr5_3:43564372-43564391 Msa0813070:intron 30.0%
! TCATTCCTTAACCTTTTGTT+GGG + chr5_3:43564373-43564392 Msa0813070:intron 30.0%
! TTTACTAACTTTTCTCCTAC+AGG + chr5_3:43564507-43564526 Msa0813070:intron 30.0%
GATTCTATGTAGCTATTAAC+TGG + chr5_3:43564617-43564636 Msa0813070:CDS 30.0%
AAAATACTTTCAGAATGGCT+AGG + chr5_3:43564698-43564717 Msa0813070:three_prime_UTR 30.0%
AAGAGGAAGGCAATAAAATA+TGG + chr5_3:43564931-43564950 Msa0813070:three_prime_UTR 30.0%
CAATAAAATATGGCAGTCTT+TGG + chr5_3:43564941-43564960 Msa0813070:intron 30.0%
ACACATCAAGATTCAACTTT+AGG + chr5_3:43564987-43565006 Msa0813070:intron 30.0%
GATAATGTCACCAACTTTGT+TGG - chr5_3:43558763-43558782 None:intergenic 35.0%
GAAATGATGTTCCAAAGATG+TGG - chr5_3:43558825-43558844 None:intergenic 35.0%
ATGCAGATTCATGAAAGGAT+TGG + chr5_3:43559117-43559136 Msa0813070:CDS 35.0%
GAAAAAAGAACCAGGTTCTT+TGG - chr5_3:43559281-43559300 None:intergenic 35.0%
TTCTTCCTTGCTAATTGTAC+CGG + chr5_3:43559298-43559317 Msa0813070:CDS 35.0%
GTTATGGTTGGAGAAAAAAC+GGG + chr5_3:43559450-43559469 Msa0813070:intron 35.0%
ATTGTGAATTCTTGGTTGGA+GGG + chr5_3:43559712-43559731 Msa0813070:intron 35.0%
AGACCCATAGTAGTTAATAG+CGG + chr5_3:43559847-43559866 Msa0813070:intron 35.0%
CTATCCGCTATTAACTACTA+TGG - chr5_3:43559854-43559873 None:intergenic 35.0%
! TATCCCGCTATAGCATTTTT+GGG - chr5_3:43559895-43559914 None:intergenic 35.0%
! AGAGAGAAGCTGAACTTTTT+AGG + chr5_3:43560263-43560282 Msa0813070:intron 35.0%
! GAGAGAAGCTGAACTTTTTA+GGG + chr5_3:43560264-43560283 Msa0813070:intron 35.0%
CATAAATATGTAAACCCCCA+GGG + chr5_3:43560545-43560564 Msa0813070:intron 35.0%
ATAAATATGTAAACCCCCAG+GGG + chr5_3:43560546-43560565 Msa0813070:intron 35.0%
ATTGAACCTAAGACTTTGAG+AGG - chr5_3:43560611-43560630 None:intergenic 35.0%
CTTAGGTTCAATTCCTATGT+TGG + chr5_3:43560619-43560638 Msa0813070:intron 35.0%
! AACCAGAACAAAGCTTTGTA+TGG - chr5_3:43560651-43560670 None:intergenic 35.0%
! TTTGTCTCAAACTTTAGGAG+TGG + chr5_3:43560781-43560800 Msa0813070:intron 35.0%
ATTGCAGAAACACATGTCAA+AGG - chr5_3:43560944-43560963 None:intergenic 35.0%
! TTTGACATGTGTTTCTGCAA+TGG + chr5_3:43560943-43560962 Msa0813070:intron 35.0%
TTTCTGCAATGGTTGTAAGT+TGG + chr5_3:43560954-43560973 Msa0813070:intron 35.0%
ATCTGCCAAACTATGTATTG+AGG + chr5_3:43560983-43561002 Msa0813070:intron 35.0%
! TGTGCTGCAAAATGTGTTTT+TGG + chr5_3:43561049-43561068 Msa0813070:intron 35.0%
! AAGGTACCTTATTTGGGATT+TGG + chr5_3:43561168-43561187 Msa0813070:intron 35.0%
AAATGACTATTTACTCGGGT+CGG - chr5_3:43561380-43561399 None:intergenic 35.0%
ACCCGAGTAAATAGTCATTT+GGG + chr5_3:43561380-43561399 Msa0813070:intron 35.0%
ACCCAAATGACTATTTACTC+GGG - chr5_3:43561384-43561403 None:intergenic 35.0%
! TGTGTTTTCGTTTGTCAGTT+TGG + chr5_3:43561482-43561501 Msa0813070:intron 35.0%
AACGAAGAAGTCACAATGTT+AGG - chr5_3:43561525-43561544 None:intergenic 35.0%
TAACATTGTGACTTCTTCGT+TGG + chr5_3:43561524-43561543 Msa0813070:intron 35.0%
AACATTGTGACTTCTTCGTT+GGG + chr5_3:43561525-43561544 Msa0813070:intron 35.0%
GTCATAACTCTAAGCAACAT+GGG - chr5_3:43561578-43561597 None:intergenic 35.0%
TGTCATAACTCTAAGCAACA+TGG - chr5_3:43561579-43561598 None:intergenic 35.0%
! TGATTTGCATAAGAGTACAG+TGG + chr5_3:43561725-43561744 Msa0813070:intron 35.0%
TGCAACTAGATGTAGTTAAC+TGG + chr5_3:43561759-43561778 Msa0813070:intron 35.0%
CTGTAACAGAATTCTGACTT+TGG + chr5_3:43561812-43561831 Msa0813070:intron 35.0%
! AGAATTCTGACTTTGGGAAA+AGG + chr5_3:43561819-43561838 Msa0813070:intron 35.0%
! GAATTCTGACTTTGGGAAAA+GGG + chr5_3:43561820-43561839 Msa0813070:intron 35.0%
ATTCTTAATAGCCTAGGACT+TGG + chr5_3:43561861-43561880 Msa0813070:intron 35.0%
TTTGCAGCTAAGAATGAAGA+TGG + chr5_3:43561886-43561905 Msa0813070:intron 35.0%
TTGCAGCTAAGAATGAAGAT+GGG + chr5_3:43561887-43561906 Msa0813070:intron 35.0%
!! CGATTTTCCTTCCTATTTCT+TGG + chr5_3:43561949-43561968 Msa0813070:intron 35.0%
TAAACTGCCAAGAAATAGGA+AGG - chr5_3:43561959-43561978 None:intergenic 35.0%
! GTGAAACATCGTATTTTTCC+TGG + chr5_3:43562111-43562130 Msa0813070:intron 35.0%
! TTTTGTTCGTTGCTGTCTAA+AGG - chr5_3:43562178-43562197 None:intergenic 35.0%
TTTAGACAGCAACGAACAAA+AGG + chr5_3:43562177-43562196 Msa0813070:intron 35.0%
TTAGACAGCAACGAACAAAA+GGG + chr5_3:43562178-43562197 Msa0813070:intron 35.0%
! AAAGGGTGTGATACTAGTAT+TGG + chr5_3:43562195-43562214 Msa0813070:intron 35.0%
AATCACTGTGCAGCTTAATT+TGG + chr5_3:43562231-43562250 Msa0813070:intron 35.0%
ATCACTGTGCAGCTTAATTT+GGG + chr5_3:43562232-43562251 Msa0813070:intron 35.0%
!!! AGTCTGACACATTGTTTTGA+AGG + chr5_3:43562257-43562276 Msa0813070:intron 35.0%
TAGGAGATTGTAAACTTCCA+GGG - chr5_3:43562324-43562343 None:intergenic 35.0%
ATAGGAGATTGTAAACTTCC+AGG - chr5_3:43562325-43562344 None:intergenic 35.0%
AACTCCATGAATTCCAAAAG+TGG - chr5_3:43562382-43562401 None:intergenic 35.0%
! ATTGGCTTCTATGAACTCTA+AGG - chr5_3:43562871-43562890 None:intergenic 35.0%
! GTTCATAGAAGCCAATTTTG+TGG + chr5_3:43562875-43562894 Msa0813070:intron 35.0%
TGTTGAAATTGCTATCAGTC+AGG + chr5_3:43563174-43563193 Msa0813070:intron 35.0%
TATACTTAACGATGGTACTG+AGG + chr5_3:43563245-43563264 Msa0813070:CDS 35.0%
! ATTGGCAGCTGATTTCTATA+TGG + chr5_3:43563422-43563441 Msa0813070:intron 35.0%
!! AGTGGATTTGTTGAAAGTAC+CGG + chr5_3:43563692-43563711 Msa0813070:CDS 35.0%
TTGAATTCCTGTCAATGTGT+AGG + chr5_3:43563757-43563776 Msa0813070:intron 35.0%
GTAACACATTCAGAATGGAA+TGG - chr5_3:43563827-43563846 None:intergenic 35.0%
AGAGAGTAACACATTCAGAA+TGG - chr5_3:43563832-43563851 None:intergenic 35.0%
GTCTATTTGTGAGACTGTTT+AGG + chr5_3:43563917-43563936 Msa0813070:intron 35.0%
TATTTGTGAGACTGTTTAGG+AGG + chr5_3:43563920-43563939 Msa0813070:intron 35.0%
ATTTGTGAGACTGTTTAGGA+GGG + chr5_3:43563921-43563940 Msa0813070:intron 35.0%
TTTATTTCCATAAGCTCTCC+AGG + chr5_3:43563985-43564004 Msa0813070:intron 35.0%
CAGCATGAAAGATATAGACT+TGG + chr5_3:43564257-43564276 Msa0813070:CDS 35.0%
GCATGAAAGATATAGACTTG+GGG + chr5_3:43564259-43564278 Msa0813070:CDS 35.0%
AAATTACCTTGTTCTGTCTG+AGG - chr5_3:43564350-43564369 None:intergenic 35.0%
! CATTCCTTAACCTTTTGTTG+GGG + chr5_3:43564374-43564393 Msa0813070:intron 35.0%
!!! GTTTTCTCAGTTGGTTTGTT+TGG + chr5_3:43564554-43564573 Msa0813070:CDS 35.0%
!!! TGGGCTACAACTTTTGTTTT+TGG + chr5_3:43564637-43564656 Msa0813070:CDS 35.0%
CTAAATAGGTTTACGCTCTT+TGG - chr5_3:43564731-43564750 None:intergenic 35.0%
!! GCTTTATTTGTTTGCATTGC+AGG + chr5_3:43564792-43564811 Msa0813070:intron 35.0%
GCATTGCAGGTCATTATTAA+AGG + chr5_3:43564805-43564824 Msa0813070:intron 35.0%
! TTCTAGTTAGCTGAACAACA+AGG + chr5_3:43564841-43564860 Msa0813070:three_prime_UTR 35.0%
GGAACTGTACTTGTTCAATT+TGG + chr5_3:43564862-43564881 Msa0813070:three_prime_UTR 35.0%
AGAAATTGTTGGCACTTGAA+AGG + chr5_3:43564886-43564905 Msa0813070:three_prime_UTR 35.0%
ACTCAAAAGATAGCTTGAAG+AGG + chr5_3:43564914-43564933 Msa0813070:three_prime_UTR 35.0%
AAAAGATAGCTTGAAGAGGA+AGG + chr5_3:43564918-43564937 Msa0813070:three_prime_UTR 35.0%
!! ACATGAAAACTGGTTTGTTG+TGG - chr5_3:43565035-43565054 None:intergenic 35.0%
! CTCATGTCTCGTACAATTTT+AGG - chr5_3:43565143-43565162 None:intergenic 35.0%
! GGGTTTGAAAAGTTGTTTCG+TGG - chr5_3:43558933-43558952 None:intergenic 40.0%
TCCTTTCATGAATCTGCATC+CGG - chr5_3:43559116-43559135 None:intergenic 40.0%
TGAAAACCATGTGATTACGC+GGG - chr5_3:43559174-43559193 None:intergenic 40.0%
GTGAAAACCATGTGATTACG+CGG - chr5_3:43559175-43559194 None:intergenic 40.0%
! CATGGTTTTCACACCTCTTT+TGG + chr5_3:43559183-43559202 Msa0813070:CDS 40.0%
ACACAAGTAGAAGCCAAAAG+AGG - chr5_3:43559199-43559218 None:intergenic 40.0%
!!! CTTTTGGCTTCTACTTGTGT+TGG + chr5_3:43559199-43559218 Msa0813070:CDS 40.0%
GCAAGGAAGAAAAAAGAACC+AGG - chr5_3:43559289-43559308 None:intergenic 40.0%
TGATACCGGTACAATTAGCA+AGG - chr5_3:43559306-43559325 None:intergenic 40.0%
CTAGCGAAAGACACATTCTA+GGG - chr5_3:43559596-43559615 None:intergenic 40.0%
ACTAGCGAAAGACACATTCT+AGG - chr5_3:43559597-43559616 None:intergenic 40.0%
CATTGTGAATTCTTGGTTGG+AGG + chr5_3:43559711-43559730 Msa0813070:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG - chr5_3:43559894-43559913 None:intergenic 40.0%
! CTATCCCGCTATAGCATTTT+TGG - chr5_3:43559896-43559915 None:intergenic 40.0%
TAGAGGAAGATTTACAGCAG+AGG + chr5_3:43560134-43560153 Msa0813070:intron 40.0%
TGGTCCATAGTAGTCAATAG+CGG - chr5_3:43560488-43560507 None:intergenic 40.0%
GCATAAATATGTAAACCCCC+AGG + chr5_3:43560544-43560563 Msa0813070:intron 40.0%
!! GTCCATACAAAGCTTTGTTC+TGG + chr5_3:43560646-43560665 Msa0813070:intron 40.0%
GAAACACATGTCAAAGGCAA+AGG - chr5_3:43560938-43560957 None:intergenic 40.0%
ACTAGTTAGGGTAGGATAGA+AGG - chr5_3:43561259-43561278 None:intergenic 40.0%
ACCAAGCATCTCACTAGTTA+GGG - chr5_3:43561271-43561290 None:intergenic 40.0%
AACCAAGCATCTCACTAGTT+AGG - chr5_3:43561272-43561291 None:intergenic 40.0%
GACCCGAGTAAATAGTCATT+TGG + chr5_3:43561379-43561398 Msa0813070:intron 40.0%
TGACTAGCAAAAGACACTCA+GGG - chr5_3:43561438-43561457 None:intergenic 40.0%
CTTCGTTGGGTGTTCATTAT+TGG + chr5_3:43561538-43561557 Msa0813070:intron 40.0%
! CTGAGAGGCATAGAAAGTAA+AGG + chr5_3:43561639-43561658 Msa0813070:intron 40.0%
CAGTATTGTTGGTCACAGTT+AGG - chr5_3:43561795-43561814 None:intergenic 40.0%
TGCAGCTAAGAATGAAGATG+GGG + chr5_3:43561888-43561907 Msa0813070:intron 40.0%
CAATGTGAGACTGTAACTGA+AGG + chr5_3:43562282-43562301 Msa0813070:CDS 40.0%
CCATGAATTCCAAAAGTGGT+GGG - chr5_3:43562378-43562397 None:intergenic 40.0%
TCCATGAATTCCAAAAGTGG+TGG - chr5_3:43562379-43562398 None:intergenic 40.0%
CGTCAGACATCATCAAATTG+AGG - chr5_3:43562467-43562486 None:intergenic 40.0%
CAGGAAAATTATCGCAAACC+TGG - chr5_3:43562492-43562511 None:intergenic 40.0%
!! TCTGTAACTGATTTGGATGC+AGG + chr5_3:43562551-43562570 Msa0813070:intron 40.0%
!! CTGTAACTGATTTGGATGCA+GGG + chr5_3:43562552-43562571 Msa0813070:intron 40.0%
! TGATTTGGATGCAGGGATTT+CGG + chr5_3:43562559-43562578 Msa0813070:intron 40.0%
TTTCGGAAGAGGAGAAGAAA+AGG + chr5_3:43562576-43562595 Msa0813070:CDS 40.0%
TCAGAGATATGCTCATGTGA+AGG + chr5_3:43562685-43562704 Msa0813070:CDS 40.0%
TAAAGCTCACCTTTGTCAAC+TGG - chr5_3:43563044-43563063 None:intergenic 40.0%
! AATTTTGCAACGGTTGTCCA+TGG - chr5_3:43563398-43563417 None:intergenic 40.0%
TCATGAAAGCAGGATCACAT+TGG + chr5_3:43563472-43563491 Msa0813070:intron 40.0%
GTACAAAGTTCTCTCTTCAC+AGG + chr5_3:43563606-43563625 Msa0813070:intron 40.0%
AAGTTCTCTCTTCACAGGAT+TGG + chr5_3:43563611-43563630 Msa0813070:intron 40.0%
!! ACAGGATTGGTATTGATGAG+TGG + chr5_3:43563624-43563643 Msa0813070:intron 40.0%
GAGAAGATATCTTGTACCGA+AGG - chr5_3:43563659-43563678 None:intergenic 40.0%
TTCCTGTCAATGTGTAGGTT+TGG + chr5_3:43563762-43563781 Msa0813070:intron 40.0%
AACCAAACCTACACATTGAC+AGG - chr5_3:43563767-43563786 None:intergenic 40.0%
TCAGAATGGAATGGCGTTTA+GGG - chr5_3:43563818-43563837 None:intergenic 40.0%
TTCAGAATGGAATGGCGTTT+AGG - chr5_3:43563819-43563838 None:intergenic 40.0%
TCTGCTTTCATAAGCTATCC+TGG - chr5_3:43564006-43564025 None:intergenic 40.0%
GAATACATTAAGGCCCTGTT+TGG - chr5_3:43564146-43564165 None:intergenic 40.0%
TATTCCCACTTGAATTCCAC+AGG + chr5_3:43564161-43564180 Msa0813070:intron 40.0%
!! GCAGCCTTGTTAAACAAAGT+AGG + chr5_3:43564210-43564229 Msa0813070:CDS 40.0%
AACAAAGTAGGTGAAGCCAA+TGG + chr5_3:43564222-43564241 Msa0813070:CDS 40.0%
TATCTTTCATGCTGTCTGCA+CGG - chr5_3:43564251-43564270 None:intergenic 40.0%
! CAGTTTGTTTACAAGCACCT+TGG + chr5_3:43564285-43564304 Msa0813070:CDS 40.0%
TTACAAGCACCTTGGAAGTA+TGG + chr5_3:43564293-43564312 Msa0813070:CDS 40.0%
TAAGCCCCAACAAAAGGTTA+AGG - chr5_3:43564381-43564400 None:intergenic 40.0%
! ACCTTTTGTTGGGGCTTATT+CGG + chr5_3:43564383-43564402 Msa0813070:intron 40.0%
! CGACATAGAGTTCCTTTTGT+TGG + chr5_3:43564457-43564476 Msa0813070:intron 40.0%
TTTCTCCTACAGGATGCAAA+AGG + chr5_3:43564517-43564536 Msa0813070:intron 40.0%
! ACAATCCTTTTGCATCCTGT+AGG - chr5_3:43564525-43564544 None:intergenic 40.0%
! ATCTAACTCGTGTCATTAGC+TGG + chr5_3:43564587-43564606 Msa0813070:CDS 40.0%
!! GGCTGCTTGTCTGCTTTTAT+GGG - chr5_3:43558741-43558760 None:intergenic 45.0%
! TTCCAAAGATGTGGGCTGAT+GGG - chr5_3:43558816-43558835 None:intergenic 45.0%
GAGAGAGAAGAGTGAGAGAT+GGG - chr5_3:43558985-43559004 None:intergenic 45.0%
GAAAACCATGTGATTACGCG+GGG - chr5_3:43559173-43559192 None:intergenic 45.0%
! CCAGGTTCTTTGGAAATAGC+AGG - chr5_3:43559271-43559290 None:intergenic 45.0%
!! CCTGCTATTTCCAAAGAACC+TGG + chr5_3:43559268-43559287 Msa0813070:CDS 45.0%
!! TCACAGCTCTAAGCAACATG+GGG - chr5_3:43559761-43559780 None:intergenic 45.0%
!! GTCACAGCTCTAAGCAACAT+GGG - chr5_3:43559762-43559781 None:intergenic 45.0%
!! TGTCACAGCTCTAAGCAACA+TGG - chr5_3:43559763-43559782 None:intergenic 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG - chr5_3:43559890-43559909 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG + chr5_3:43559888-43559907 Msa0813070:intron 45.0%
GACCCCAAAAATGCTATAGC+GGG + chr5_3:43559889-43559908 Msa0813070:intron 45.0%
CAGAAACAGAGAGAGCAGAA+TGG + chr5_3:43560002-43560021 Msa0813070:intron 45.0%
AGAGAGAGCAGAATGGAGTT+TGG + chr5_3:43560009-43560028 Msa0813070:intron 45.0%
GAGCAAACACGACAAAGTAG+AGG + chr5_3:43560117-43560136 Msa0813070:intron 45.0%
! AACGCTTCGTAGCAGTTTTG+CGG - chr5_3:43560379-43560398 None:intergenic 45.0%
TATCTCACACCGCAACACTA+TGG + chr5_3:43560406-43560425 Msa0813070:intron 45.0%
CACAACAAGCCATAGTGTTG+CGG - chr5_3:43560418-43560437 None:intergenic 45.0%
TAGTCAATAGCGGCCAATAG+CGG - chr5_3:43560478-43560497 None:intergenic 45.0%
! TTGGCCGCTATTGACTACTA+TGG + chr5_3:43560481-43560500 Msa0813070:intron 45.0%
! TGGTCTGGTGATGTAGGATA+AGG + chr5_3:43560570-43560589 Msa0813070:intron 45.0%
GTGATGTAGGATAAGGACCT+CGG + chr5_3:43560577-43560596 Msa0813070:intron 45.0%
TGTGCTCCTCTCAAAGTCTT+AGG + chr5_3:43560602-43560621 Msa0813070:intron 45.0%
! TGTATGGACTGACCCAACAT+AGG - chr5_3:43560635-43560654 None:intergenic 45.0%
TAATCCCACCGTTAACTAGC+TGG - chr5_3:43560687-43560706 None:intergenic 45.0%
AGCATCTCACTAGTTAGGGT+AGG - chr5_3:43561267-43561286 None:intergenic 45.0%
ACCCTAACTAGTGAGATGCT+TGG + chr5_3:43561267-43561286 Msa0813070:intron 45.0%
TTCAAAGCAGTTCCTGACAC+TGG + chr5_3:43561315-43561334 Msa0813070:intron 45.0%
AAGACACTCAGGGACTATAG+TGG - chr5_3:43561428-43561447 None:intergenic 45.0%
CTGACTAGCAAAAGACACTC+AGG - chr5_3:43561439-43561458 None:intergenic 45.0%
GTTATGCAACAAGCCAAACC+AGG + chr5_3:43561910-43561929 Msa0813070:intron 45.0%
CAGAACACGCAACAGTACTA+CGG - chr5_3:43562035-43562054 None:intergenic 45.0%
AACTGAAGGAACACAGACAC+TGG + chr5_3:43562296-43562315 Msa0813070:CDS 45.0%
!!! CCCACCACTTTTGGAATTCA+TGG + chr5_3:43562375-43562394 Msa0813070:CDS 45.0%
TCGTGAAGTTTACCATGCAC+AGG + chr5_3:43562422-43562441 Msa0813070:CDS 45.0%
!! TTGATGATGTCTGACGTTCC+AGG + chr5_3:43562471-43562490 Msa0813070:CDS 45.0%
GAAAAGGCTGTTACACTGTG+TGG + chr5_3:43562592-43562611 Msa0813070:CDS 45.0%
CTGTTACACTGTGTGGTTGT+CGG + chr5_3:43562599-43562618 Msa0813070:CDS 45.0%
CCACTAAATTCAACTCCCGT+AGG - chr5_3:43562632-43562651 None:intergenic 45.0%
CCTACGGGAGTTGAATTTAG+TGG + chr5_3:43562629-43562648 Msa0813070:CDS 45.0%
AACAGTCATCTTGCTCTTGC+TGG + chr5_3:43562800-43562819 Msa0813070:intron 45.0%
! CTTCCTTTGATGACCGACTT+AGG + chr5_3:43563004-43563023 Msa0813070:CDS 45.0%
! GATGGTACTGAGGTTCCATA+CGG + chr5_3:43563255-43563274 Msa0813070:CDS 45.0%
! ATGGTACTGAGGTTCCATAC+GGG + chr5_3:43563256-43563275 Msa0813070:CDS 45.0%
AGCGAGTGGATAAAAGGTGA+TGG - chr5_3:43563309-43563328 None:intergenic 45.0%
! ATCACCTTTTATCCACTCGC+TGG + chr5_3:43563308-43563327 Msa0813070:CDS 45.0%
AGATCCAGCGAGTGGATAAA+AGG - chr5_3:43563315-43563334 None:intergenic 45.0%
ACCTTCCACCAGGAGATTTA+GGG - chr5_3:43563338-43563357 None:intergenic 45.0%
AACCTTCCACCAGGAGATTT+AGG - chr5_3:43563339-43563358 None:intergenic 45.0%
GAGTAAACAAACCTTCCACC+AGG - chr5_3:43563348-43563367 None:intergenic 45.0%
TTCTCAATAGGTGACTGCAG+TGG + chr5_3:43563674-43563693 Msa0813070:CDS 45.0%
!!! AGCAGGAAGTGTTGGTTTTC+CGG - chr5_3:43563714-43563733 None:intergenic 45.0%
AAAGTTACTTGGGCAAGAGC+AGG - chr5_3:43563731-43563750 None:intergenic 45.0%
AGACTGTTTAGGAGGGCTTA+TGG + chr5_3:43563928-43563947 Msa0813070:intron 45.0%
AAGCTATCCTGGAGAGCTTA+TGG - chr5_3:43563995-43564014 None:intergenic 45.0%
GCTACCTGTGGAATTCAAGT+GGG - chr5_3:43564168-43564187 None:intergenic 45.0%
TGCTACCTGTGGAATTCAAG+TGG - chr5_3:43564169-43564188 None:intergenic 45.0%
AAAGTAGGTGAAGCCAATGG+AGG + chr5_3:43564225-43564244 Msa0813070:CDS 45.0%
CAACAGTTGCCATACTTCCA+AGG - chr5_3:43564305-43564324 None:intergenic 45.0%
! CTTGGAAGTATGGCAACTGT+TGG + chr5_3:43564303-43564322 Msa0813070:CDS 45.0%
GGCAACTGTTGGAAGTTACA+AGG + chr5_3:43564314-43564333 Msa0813070:CDS 45.0%
AGTAGACCTCAGACAGAACA+AGG + chr5_3:43564341-43564360 Msa0813070:CDS 45.0%
ACCGAATAAGCCCCAACAAA+AGG - chr5_3:43564387-43564406 None:intergenic 45.0%
GCATAGTATCCCAGGAGAAT+GGG + chr5_3:43564413-43564432 Msa0813070:intron 45.0%
CATAGTATCCCAGGAGAATG+GGG + chr5_3:43564414-43564433 Msa0813070:intron 45.0%
TCGAGCACAGATAATTCCAG+TGG - chr5_3:43564440-43564459 None:intergenic 45.0%
GGATGCAAAAGGATTGTCTC+TGG + chr5_3:43564528-43564547 Msa0813070:intron 45.0%
! TAACTCGTGTCATTAGCTGG+AGG + chr5_3:43564590-43564609 Msa0813070:CDS 45.0%
!! GGGCTGCTTGTCTGCTTTTA+TGG - chr5_3:43558742-43558761 None:intergenic 50.0%
GACAAGCAGCCCAACAAAGT+TGG + chr5_3:43558750-43558769 Msa0813070:five_prime_UTR 50.0%
! AAGATGTGGGCTGATGGGAT+GGG - chr5_3:43558811-43558830 None:intergenic 50.0%
! AAAGATGTGGGCTGATGGGA+TGG - chr5_3:43558812-43558831 None:intergenic 50.0%
ATCCCATCAGCCCACATCTT+TGG + chr5_3:43558811-43558830 Msa0813070:five_prime_UTR 50.0%
! GTTCCAAAGATGTGGGCTGA+TGG - chr5_3:43558817-43558836 None:intergenic 50.0%
!! AGAAGGGTTGGTCGAGTATG+GGG - chr5_3:43558954-43558973 None:intergenic 50.0%
!! GAGAAGGGTTGGTCGAGTAT+GGG - chr5_3:43558955-43558974 None:intergenic 50.0%
!! TGAGAAGGGTTGGTCGAGTA+TGG - chr5_3:43558956-43558975 None:intergenic 50.0%
GAGATGGGAAGAGGTGAGAA+GGG - chr5_3:43558970-43558989 None:intergenic 50.0%
AGAGATGGGAAGAGGTGAGA+AGG - chr5_3:43558971-43558990 None:intergenic 50.0%
GAAGAGTGAGAGATGGGAAG+AGG - chr5_3:43558979-43558998 None:intergenic 50.0%
CGAGAGAGAAGAGTGAGAGA+TGG - chr5_3:43558986-43559005 None:intergenic 50.0%
GCCGGATGCAGATTCATGAA+AGG + chr5_3:43559112-43559131 Msa0813070:CDS 50.0%
TGTATCCCCGCGTAATCACA+TGG + chr5_3:43559165-43559184 Msa0813070:CDS 50.0%
CTGTTGCTGAACCTGTTGCT+AGG + chr5_3:43559239-43559258 Msa0813070:CDS 50.0%
! GCAGGTTGAATCCTAGCAAC+AGG - chr5_3:43559253-43559272 None:intergenic 50.0%
GGACGTGCATATTGCCTAAG+AGG + chr5_3:43559382-43559401 Msa0813070:intron 50.0%
CTTGGTTGGAGGGTCATTGT+TGG + chr5_3:43559722-43559741 Msa0813070:intron 50.0%
AGTGTTGCGGTGTGAGATAG+CGG - chr5_3:43560405-43560424 None:intergenic 50.0%
ATATGTAAACCCCCAGGGGT+TGG + chr5_3:43560550-43560569 Msa0813070:intron 50.0%
TGACCCTGCCAGCTAGTTAA+CGG + chr5_3:43560676-43560695 Msa0813070:intron 50.0%
!! GATTAGTCCCGCGGATTAGT+GGG + chr5_3:43560702-43560721 Msa0813070:intron 50.0%
CCAATTACCCACTAATCCGC+GGG - chr5_3:43560712-43560731 None:intergenic 50.0%
CCCAATTACCCACTAATCCG+CGG - chr5_3:43560713-43560732 None:intergenic 50.0%
!! CCGCGGATTAGTGGGTAATT+GGG + chr5_3:43560710-43560729 Msa0813070:intron 50.0%
! GGATTAGTGGGTAATTGGGC+AGG + chr5_3:43560714-43560733 Msa0813070:intron 50.0%
AGCTGCAAACACCAAGTCCT+AGG - chr5_3:43561875-43561894 None:intergenic 50.0%
ATGCAACAAGCCAAACCAGG+AGG + chr5_3:43561913-43561932 Msa0813070:intron 50.0%
GTTCAACACTCCTCCTGGTT+TGG - chr5_3:43561926-43561945 None:intergenic 50.0%
CGAAAGTTCAACACTCCTCC+TGG - chr5_3:43561931-43561950 None:intergenic 50.0%
ACGCAACAGTACTACGGCTA+TGG - chr5_3:43562029-43562048 None:intergenic 50.0%
TGCGACGAATTTCCTGTGCA+TGG - chr5_3:43562437-43562456 None:intergenic 50.0%
TTACACTGTGTGGTTGTCGG+AGG + chr5_3:43562602-43562621 Msa0813070:CDS 50.0%
GTGCCTAAGTCGGTCATCAA+AGG - chr5_3:43563010-43563029 None:intergenic 50.0%
CACCTTTGTCAACTGGTTGG+TGG - chr5_3:43563037-43563056 None:intergenic 50.0%
GCTCACCTTTGTCAACTGGT+TGG - chr5_3:43563040-43563059 None:intergenic 50.0%
! TTCCATACGGGTTGCTGGTT+TGG + chr5_3:43563268-43563287 Msa0813070:CDS 50.0%
!! CTGGTTTGGTCTACTGGAGT+TGG + chr5_3:43563282-43563301 Msa0813070:CDS 50.0%
ATTTAGGGAGATCCAGCGAG+TGG - chr5_3:43563323-43563342 None:intergenic 50.0%
CTGGATCTCCCTAAATCTCC+TGG + chr5_3:43563327-43563346 Msa0813070:CDS 50.0%
GATCTCCCTAAATCTCCTGG+TGG + chr5_3:43563330-43563349 Msa0813070:CDS 50.0%
TCCCTAAATCTCCTGGTGGA+AGG + chr5_3:43563334-43563353 Msa0813070:CDS 50.0%
TGAGTGGCTTCGTGTTCCTT+CGG + chr5_3:43563640-43563659 Msa0813070:CDS 50.0%
GTCTTCACGCATAGTATCCC+AGG + chr5_3:43564405-43564424 Msa0813070:intron 50.0%
CGCATAGTATCCCAGGAGAA+TGG + chr5_3:43564412-43564431 Msa0813070:intron 50.0%
GCAAAAGGATTGTCTCTGGC+AGG + chr5_3:43564532-43564551 Msa0813070:CDS 50.0%
! CTCTGGCAGGTTTTCTCAGT+TGG + chr5_3:43564545-43564564 Msa0813070:CDS 50.0%
!! CAGTTGGTTTGTTTGGCGCT+CGG + chr5_3:43564561-43564580 Msa0813070:CDS 50.0%
!! GAAGGGTTGGTCGAGTATGG+GGG - chr5_3:43558953-43558972 None:intergenic 55.0%
TGGGAAGAGGTGAGAAGGGT+TGG - chr5_3:43558966-43558985 None:intergenic 55.0%
CGCTTCTCCACTTCAACACC+CGG + chr5_3:43559004-43559023 Msa0813070:CDS 55.0%
!! GGTTGAACCGGGTGTTGAAG+TGG - chr5_3:43559014-43559033 None:intergenic 55.0%
!! GGCTTCTCGTGTGGTTTGGT+TGG - chr5_3:43559064-43559083 None:intergenic 55.0%
!! TGGCTTGTTGTGTAGCGCTC+CGG + chr5_3:43560426-43560445 Msa0813070:intron 55.0%
ACATCACCAGACCAACCCCT+GGG - chr5_3:43560564-43560583 None:intergenic 55.0%
TACATCACCAGACCAACCCC+TGG - chr5_3:43560565-43560584 None:intergenic 55.0%
!! AGGGGTTGGTCTGGTGATGT+AGG + chr5_3:43560564-43560583 Msa0813070:intron 55.0%
! TTTGAGAGGAGCACACTCCG+AGG - chr5_3:43560597-43560616 None:intergenic 55.0%
CCACCGTTAACTAGCTGGCA+GGG - chr5_3:43560682-43560701 None:intergenic 55.0%
CCTGCCAGCTAGTTAACGGT+GGG + chr5_3:43560680-43560699 Msa0813070:intron 55.0%
!! TAACGGTGGGATTAGTCCCG+CGG + chr5_3:43560693-43560712 Msa0813070:intron 55.0%
!! GGATTAGTCCCGCGGATTAG+TGG + chr5_3:43560701-43560720 Msa0813070:intron 55.0%
!! CCCGCGGATTAGTGGGTAAT+TGG + chr5_3:43560709-43560728 Msa0813070:intron 55.0%
GAACACAGACACTGGATCCC+TGG + chr5_3:43562304-43562323 Msa0813070:CDS 55.0%
! GGAGCACAACCCACCACTTT+TGG + chr5_3:43562366-43562385 Msa0813070:CDS 55.0%
GGATGCAGGGATTTCGGAAG+AGG + chr5_3:43562565-43562584 Msa0813070:intron 55.0%
! TGGTGGCGTAGTGCCTAAGT+CGG - chr5_3:43563020-43563039 None:intergenic 55.0%
CGCCACCAACCAGTTGACAA+AGG + chr5_3:43563032-43563051 Msa0813070:CDS 55.0%
! TCAGGAGTGCGACTTGTTCG+AGG + chr5_3:43563192-43563211 Msa0813070:CDS 55.0%
! TGAGGTTCCATACGGGTTGC+TGG + chr5_3:43563263-43563282 Msa0813070:CDS 55.0%
GACCAAACCAGCAACCCGTA+TGG - chr5_3:43563273-43563292 None:intergenic 55.0%
!! GGGTTGCTGGTTTGGTCTAC+TGG + chr5_3:43563276-43563295 Msa0813070:CDS 55.0%
! TGGGCAAGAGCAGGAAGTGT+TGG - chr5_3:43563722-43563741 None:intergenic 55.0%
CCTTGTCTCTCTGCTACCTG+TGG - chr5_3:43564180-43564199 None:intergenic 55.0%
CCACAGGTAGCAGAGAGACA+AGG + chr5_3:43564177-43564196 Msa0813070:intron 55.0%
AACACCCGGTTCAACCGCTC+CGG + chr5_3:43559018-43559037 Msa0813070:CDS 60.0%
! AACCGCTCCGGTTCGCTATG+CGG + chr5_3:43559030-43559049 Msa0813070:CDS 60.0%
GCGTGGCTTCTCGTGTGGTT+TGG - chr5_3:43559068-43559087 None:intergenic 60.0%
AAGCCACGCGTGGTGGTTCT+CGG + chr5_3:43559079-43559098 Msa0813070:CDS 60.0%
!! TGGTGGTTCTCGGCACTGGT+TGG + chr5_3:43559089-43559108 Msa0813070:CDS 60.0%
!! GGTGGTTCTCGGCACTGGTT+GGG + chr5_3:43559090-43559109 Msa0813070:CDS 60.0%
! TAGCGGATAGCAGCGCGTAG+CGG + chr5_3:43559864-43559883 Msa0813070:intron 60.0%
GGCCAATAGCGGCGCTATAG+CGG - chr5_3:43560467-43560486 None:intergenic 60.0%
!! TAAACCCCCAGGGGTTGGTC+TGG + chr5_3:43560555-43560574 Msa0813070:intron 60.0%
ATCACCAGACCAACCCCTGG+GGG - chr5_3:43560562-43560581 None:intergenic 60.0%
CATCACCAGACCAACCCCTG+GGG - chr5_3:43560563-43560582 None:intergenic 60.0%
CCCTGCCAGCTAGTTAACGG+TGG + chr5_3:43560679-43560698 Msa0813070:intron 60.0%
CCCACCGTTAACTAGCTGGC+AGG - chr5_3:43560683-43560702 None:intergenic 60.0%
CCATTGGGGCTTCCAGTGTC+AGG - chr5_3:43561330-43561349 None:intergenic 60.0%
CCTGACACTGGAAGCCCCAA+TGG + chr5_3:43561327-43561346 Msa0813070:intron 60.0%
CACTGTGTGGTTGTCGGAGG+TGG + chr5_3:43562605-43562624 Msa0813070:CDS 60.0%
GGTTGTCGGAGGTGGTCCTA+CGG + chr5_3:43562613-43562632 Msa0813070:CDS 60.0%
GTTGTCGGAGGTGGTCCTAC+GGG + chr5_3:43562614-43562633 Msa0813070:CDS 60.0%
TCCAGTGGCCCCATTCTCCT+GGG - chr5_3:43564425-43564444 None:intergenic 60.0%
TTCCAGTGGCCCCATTCTCC+TGG - chr5_3:43564426-43564445 None:intergenic 60.0%
CGAACCGGAGCGGTTGAACC+GGG - chr5_3:43559025-43559044 None:intergenic 65.0%
GCGAACCGGAGCGGTTGAAC+CGG - chr5_3:43559026-43559045 None:intergenic 65.0%
AGCCGCATAGCGAACCGGAG+CGG - chr5_3:43559035-43559054 None:intergenic 65.0%
CCGAGAGCCGCATAGCGAAC+CGG - chr5_3:43559040-43559059 None:intergenic 65.0%
! CCGGTTCGCTATGCGGCTCT+CGG + chr5_3:43559037-43559056 Msa0813070:CDS 65.0%
ACCACACGAGAAGCCACGCG+TGG + chr5_3:43559069-43559088 Msa0813070:CDS 65.0%
ACCACGCGTGGCTTCTCGTG+TGG - chr5_3:43559073-43559092 None:intergenic 65.0%
ACACGAGAAGCCACGCGTGG+TGG + chr5_3:43559072-43559091 Msa0813070:CDS 65.0%
!! GTTCTCGGCACTGGTTGGGC+CGG + chr5_3:43559094-43559113 Msa0813070:CDS 65.0%
GGCCGCTATAGCGCCGCTAT+TGG + chr5_3:43560462-43560481 Msa0813070:intron 65.0%
GCTGTCTGCACGGCCTCCAT+TGG - chr5_3:43564241-43564260 None:intergenic 65.0%
TCCCAGGAGAATGGGGCCAC+TGG + chr5_3:43564421-43564440 Msa0813070:intron 65.0%
GTGCCGAGAACCACCACGCG+TGG - chr5_3:43559085-43559104 None:intergenic 70.0%
CGCGTGGTGGTTCTCGGCAC+TGG + chr5_3:43559085-43559104 Msa0813070:CDS 70.0%
GCTATAGCGGCCGCGCGGTG+CGG - chr5_3:43560454-43560473 None:intergenic 75.0%
! GCGGCGCTATAGCGGCCGCG+CGG - chr5_3:43560459-43560478 None:intergenic 80.0%
! CGCTCCGGCACCGCACCGCG+CGG + chr5_3:43560441-43560460 Msa0813070:intron 85.0%
! GCGGCCGCGCGGTGCGGTGC+CGG - chr5_3:43560448-43560467 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 43558731 43565211 43558731 ID=Msa0813070;Name=Msa0813070
chr5_3 mRNA 43558731 43565211 43558731 ID=Msa0813070-mRNA-1;Parent=Msa0813070;Name=Msa0813070-mRNA-1;_AED=0.11;_eAED=0.11;_QI=159|1|1|1|0.77|0.7|10|404|501
chr5_3 exon 43558731 43559342 43558731 ID=Msa0813070-mRNA-1:exon:13368;Parent=Msa0813070-mRNA-1
chr5_3 exon 43562279 43562492 43562279 ID=Msa0813070-mRNA-1:exon:13369;Parent=Msa0813070-mRNA-1
chr5_3 exon 43562573 43562733 43562573 ID=Msa0813070-mRNA-1:exon:13370;Parent=Msa0813070-mRNA-1
chr5_3 exon 43562988 43563053 43562988 ID=Msa0813070-mRNA-1:exon:13371;Parent=Msa0813070-mRNA-1
chr5_3 exon 43563192 43563355 43563192 ID=Msa0813070-mRNA-1:exon:13372;Parent=Msa0813070-mRNA-1
chr5_3 exon 43563628 43563742 43563628 ID=Msa0813070-mRNA-1:exon:13373;Parent=Msa0813070-mRNA-1
chr5_3 exon 43564183 43564362 43564183 ID=Msa0813070-mRNA-1:exon:13374;Parent=Msa0813070-mRNA-1
chr5_3 exon 43564529 43564736 43564529 ID=Msa0813070-mRNA-1:exon:13375;Parent=Msa0813070-mRNA-1
chr5_3 exon 43564827 43564952 43564827 ID=Msa0813070-mRNA-1:exon:13376;Parent=Msa0813070-mRNA-1
chr5_3 exon 43564989 43565211 43564989 ID=Msa0813070-mRNA-1:exon:13377;Parent=Msa0813070-mRNA-1
chr5_3 five_prime_UTR 43558731 43558889 43558731 ID=Msa0813070-mRNA-1:five_prime_utr;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43558890 43559342 43558890 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43562279 43562492 43562279 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43562573 43562733 43562573 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43562988 43563053 43562988 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43563192 43563355 43563192 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43563628 43563742 43563628 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43564183 43564362 43564183 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 CDS 43564529 43564681 43564529 ID=Msa0813070-mRNA-1:cds;Parent=Msa0813070-mRNA-1
chr5_3 three_prime_UTR 43564682 43564736 43564682 ID=Msa0813070-mRNA-1:three_prime_utr;Parent=Msa0813070-mRNA-1
chr5_3 three_prime_UTR 43564827 43564952 43564827 ID=Msa0813070-mRNA-1:three_prime_utr;Parent=Msa0813070-mRNA-1
chr5_3 three_prime_UTR 43564989 43565211 43564989 ID=Msa0813070-mRNA-1:three_prime_utr;Parent=Msa0813070-mRNA-1
Gene Sequence

>Msa0813070

ATGTCTTTGTTTAAAAACCTCTCAAAAAGTTACTTCTTCACCACGAAACAACTTTTCAAACCCCCATACTCGACCAACCCTTCTCACCTCTTCCCATCTCTCACTCTTCTCTCTCGCTTCTCCACTTCAACACCCGGTTCAACCGCTCCGGTTCGCTATGCGGCTCTCGGACCAACCAAACCACACGAGAAGCCACGCGTGGTGGTTCTCGGCACTGGTTGGGCCGGATGCAGATTCATGAAAGGATTGGATTCTAATATCTACGATATCGTTTGTGTATCCCCGCGTAATCACATGGTTTTCACACCTCTTTTGGCTTCTACTTGTGTTGGAACTCTTGAGTTTCGATCTGTTGCTGAACCTGTTGCTAGGATTCAACCTGCTATTTCCAAAGAACCTGGTTCTTTTTTCTTCCTTGCTAATTGTACCGGTATCAATGCTGATAAACATGAGGTACAATGTGAGACTGTAACTGAAGGAACACAGACACTGGATCCCTGGAAGTTTACAATCTCCTATGATAAGTTAGTAATTGCATTAGGAGCACAACCCACCACTTTTGGAATTCATGGAGTTTATGAACATGCAATTTTTCTTCGTGAAGTTTACCATGCACAGGAAATTCGTCGCAAGTTGCTCCTCAATTTGATGATGTCTGACGTTCCAGGGATTTCGGAAGAGGAGAAGAAAAGGCTGTTACACTGTGTGGTTGTCGGAGGTGGTCCTACGGGAGTTGAATTTAGTGGTGAGCTTAGTGATTTTATCATGAGAGATGTTCGTCAGAGATATGCTCATGTGAAGGACTATATCCATGTTACTTTGATTGAGGCCAATGAGATATTGTCTTCCTTTGATGACCGACTTAGGCACTACGCCACCAACCAGTTGACAAAGTCAGGAGTGCGACTTGTTCGAGGCATTGTGAAAGATGTCGAAGAAAAGAAGATTATACTTAACGATGGTACTGAGGTTCCATACGGGTTGCTGGTTTGGTCTACTGGAGTTGGTCCATCACCTTTTATCCACTCGCTGGATCTCCCTAAATCTCCTGGTGGAAGGATTGGTATTGATGAGTGGCTTCGTGTTCCTTCGGTACAAGATATCTTCTCAATAGGTGACTGCAGTGGATTTGTTGAAAGTACCGGAAAACCAACACTTCCTGCTCTTGCCCAAGTAGCAGAGAGACAAGGTAAATACTTAGCAGCCTTGTTAAACAAAGTAGGTGAAGCCAATGGAGGCCGTGCAGACAGCATGAAAGATATAGACTTGGGGAATCAGTTTGTTTACAAGCACCTTGGAAGTATGGCAACTGTTGGAAGTTACAAGGCTCTAGTAGACCTCAGACAGAACAAGGATGCAAAAGGATTGTCTCTGGCAGGTTTTCTCAGTTGGTTTGTTTGGCGCTCGGCTTATCTAACTCGTGTCATTAGCTGGAGGAACAGATTCTATGTAGCTATTAACTGGGCTACAACTTTTGTTTTTGGCCGTGATATAAGCAGAATATGA

Protein sequence

>Msa0813070

MSLFKNLSKSYFFTTKQLFKPPYSTNPSHLFPSLTLLSRFSTSTPGSTAPVRYAALGPTKPHEKPRVVVLGTGWAGCRFMKGLDSNIYDIVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPVARIQPAISKEPGSFFFLANCTGINADKHEVQCETVTEGTQTLDPWKFTISYDKLVIALGAQPTTFGIHGVYEHAIFLREVYHAQEIRRKLLLNLMMSDVPGISEEEKKRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYAHVKDYIHVTLIEANEILSSFDDRLRHYATNQLTKSGVRLVRGIVKDVEEKKIILNDGTEVPYGLLVWSTGVGPSPFIHSLDLPKSPGGRIGIDEWLRVPSVQDIFSIGDCSGFVESTGKPTLPALAQVAERQGKYLAALLNKVGEANGGRADSMKDIDLGNQFVYKHLGSMATVGSYKALVDLRQNKDAKGLSLAGFLSWFVWRSAYLTRVISWRNRFYVAINWATTFVFGRDISRI*