Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775760 | sp|O80874|NDA2_ARATH | 74.213 | 508 | 120 | 2 | 1 | 497 | 1 | 508 | 0.0 | 768 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775760 | G7JZJ2 | 98.204 | 501 | 5 | 1 | 1 | 497 | 1 | 501 | 0.0 | 1014 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0775760 | Msa0813070 | 0.829605 | 4.687746e-55 | -8.615850e-47 |
| Msa0775760 | Msa1398140 | 0.801619 | 8.265946e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775760 | MtrunA17_Chr5g0430321 | 98.204 | 501 | 5 | 1 | 1 | 497 | 1 | 501 | 0.0 | 1014 |
| Msa0775760 | MtrunA17_Chr3g0105191 | 77.426 | 505 | 105 | 3 | 1 | 497 | 1 | 504 | 0.0 | 788 |
| Msa0775760 | MtrunA17_Chr4g0048041 | 76.327 | 452 | 107 | 0 | 46 | 497 | 92 | 543 | 0.0 | 749 |
| Msa0775760 | MtrunA17_Chr4g0022591 | 40.220 | 363 | 197 | 9 | 24 | 371 | 15 | 372 | 8.31e-76 | 249 |
| Msa0775760 | MtrunA17_Chr4g0022591 | 36.957 | 138 | 73 | 4 | 369 | 497 | 445 | 577 | 1.60e-15 | 79.3 |
| Msa0775760 | MtrunA17_Chr2g0281111 | 41.796 | 323 | 175 | 7 | 59 | 371 | 51 | 370 | 2.92e-74 | 245 |
| Msa0775760 | MtrunA17_Chr2g0281111 | 36.667 | 120 | 67 | 2 | 382 | 497 | 464 | 578 | 3.25e-13 | 72.0 |
| Msa0775760 | MtrunA17_Chr4g0048381 | 41.176 | 323 | 177 | 7 | 59 | 371 | 51 | 370 | 3.10e-73 | 242 |
| Msa0775760 | MtrunA17_Chr4g0048381 | 35.833 | 120 | 68 | 2 | 382 | 497 | 464 | 578 | 1.27e-12 | 70.1 |
| Msa0775760 | MtrunA17_Chr4g0022601 | 40.179 | 336 | 179 | 8 | 49 | 371 | 38 | 364 | 1.05e-70 | 235 |
| Msa0775760 | MtrunA17_Chr4g0022601 | 33.058 | 121 | 72 | 2 | 381 | 497 | 454 | 569 | 4.17e-11 | 65.5 |
| Msa0775760 | MtrunA17_Chr8g0384841 | 25.109 | 458 | 286 | 14 | 58 | 486 | 83 | 512 | 3.86e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775760 | AT2G29990.1 | 74.213 | 508 | 120 | 2 | 1 | 497 | 1 | 508 | 0.0 | 768 |
| Msa0775760 | AT1G07180.1 | 75.154 | 487 | 106 | 1 | 26 | 497 | 24 | 510 | 0.0 | 756 |
| Msa0775760 | AT4G28220.2 | 40.184 | 326 | 175 | 8 | 63 | 375 | 52 | 370 | 3.88e-73 | 240 |
| Msa0775760 | AT4G28220.1 | 40.184 | 326 | 175 | 8 | 63 | 375 | 52 | 370 | 1.79e-72 | 240 |
| Msa0775760 | AT4G28220.1 | 34.711 | 121 | 70 | 2 | 381 | 497 | 456 | 571 | 2.27e-12 | 69.7 |
| Msa0775760 | AT4G21490.1 | 38.547 | 358 | 209 | 6 | 43 | 392 | 38 | 392 | 3.24e-67 | 226 |
| Msa0775760 | AT4G21490.1 | 33.333 | 120 | 71 | 2 | 382 | 497 | 466 | 580 | 7.72e-11 | 65.1 |
| Msa0775760 | AT4G21490.2 | 38.547 | 358 | 208 | 6 | 43 | 392 | 38 | 391 | 4.57e-67 | 226 |
| Msa0775760 | AT4G21490.2 | 33.333 | 120 | 71 | 2 | 382 | 497 | 465 | 579 | 7.44e-11 | 65.1 |
| Msa0775760 | AT4G05020.1 | 40.810 | 321 | 178 | 6 | 59 | 371 | 57 | 373 | 1.26e-65 | 222 |
| Msa0775760 | AT4G05020.1 | 34.167 | 120 | 70 | 2 | 382 | 497 | 468 | 582 | 1.84e-11 | 67.0 |
| Msa0775760 | AT4G05020.2 | 40.810 | 321 | 178 | 6 | 59 | 371 | 57 | 373 | 4.27e-65 | 222 |
| Msa0775760 | AT2G20800.1 | 34.752 | 423 | 228 | 10 | 10 | 409 | 5 | 402 | 1.23e-61 | 212 |
| Msa0775760 | AT2G20800.1 | 36.364 | 121 | 68 | 2 | 381 | 497 | 467 | 582 | 2.19e-13 | 73.2 |
Find 157 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTCCACCAGGAGATTT+AGG | 0.197104 | 5_2:+52869801 | None:intergenic |
| CTAAATAGGTTTAAGCTCTT+TGG | 0.215707 | 5_2:+52868377 | None:intergenic |
| GATGAAGGGTTGGTGGTGTT+GGG | 0.253970 | 5_2:+52873450 | None:intergenic |
| GGGTTGCTGGTTTGGTCTAC+TGG | 0.259356 | 5_2:-52869861 | Msa0775760:CDS |
| GGAGCACAACCCACCACTTT+TGG | 0.268489 | 5_2:-52870742 | Msa0775760:CDS |
| GATTCTATGTAGCTATTAAC+TGG | 0.277448 | 5_2:-52868488 | Msa0775760:CDS |
| GTTTCCTCAGTTGGTTTGTT+TGG | 0.290668 | 5_2:-52868551 | Msa0775760:CDS |
| AGATGAAGGGTTGGTGGTGT+TGG | 0.293102 | 5_2:+52873449 | None:intergenic |
| ATCTGATCAGCCCACATCTT+TGG | 0.294445 | 5_2:-52873597 | Msa0775760:five_prime_UTR |
| GGAACTGTACTTGTTCAATT+TGG | 0.297617 | 5_2:-52868243 | Msa0775760:three_prime_UTR |
| ATGAAGGGTTGGTGGTGTTG+GGG | 0.305167 | 5_2:+52873451 | None:intergenic |
| TGAGGTTCCTTACGGGTTGC+TGG | 0.305317 | 5_2:-52869874 | Msa0775760:CDS |
| TTCCTTACGGGTTGCTGGTT+TGG | 0.310597 | 5_2:-52869869 | Msa0775760:CDS |
| ACACATCAAGATTCAACTTT+AGG | 0.324481 | 5_2:-52868118 | Msa0775760:three_prime_UTR |
| CTCTAGCAGGTTTCCTCAGT+TGG | 0.327292 | 5_2:-52868560 | Msa0775760:CDS |
| ACCTTCCACCAGGAGATTTA+GGG | 0.336747 | 5_2:+52869802 | None:intergenic |
| TGATTTGGATGCAGGGATTT+CGG | 0.349898 | 5_2:-52870549 | Msa0775760:intron |
| GATAATGTCACCAACTTTGT+TGG | 0.350078 | 5_2:+52873635 | None:intergenic |
| TTCTTCCTTGCTAATTGTAC+TGG | 0.351919 | 5_2:-52873117 | Msa0775760:CDS |
| TGAAGGGTTGGTGGTGTTGG+GGG | 0.359640 | 5_2:+52873452 | None:intergenic |
| AAGAGGAAGGCAATAAAATA+TGG | 0.365704 | 5_2:-52868174 | Msa0775760:intron |
| GATAAGTTAGTAATTGCATT+AGG | 0.372684 | 5_2:-52870763 | Msa0775760:CDS |
| TTCAATTTGGTAGAAATTGT+TGG | 0.380197 | 5_2:-52868230 | Msa0775760:three_prime_UTR |
| GTTGATATAAACATGAAAAC+TGG | 0.381268 | 5_2:+52868063 | None:intergenic |
| AGATCTAGCGAGTGGATAAA+AGG | 0.387681 | 5_2:+52869825 | None:intergenic |
| GAGAGAAGAGTGAGAGATGA+AGG | 0.394015 | 5_2:+52873435 | None:intergenic |
| AAGCCACGCGTGGTGGTTCT+CGG | 0.403632 | 5_2:-52873336 | Msa0775760:CDS |
| GCACCGGTTGGGCCGGATGC+AGG | 0.407372 | 5_2:-52873314 | Msa0775760:CDS |
| GTACAAGATATCTTCTCAAT+AGG | 0.408338 | 5_2:-52869516 | Msa0775760:CDS |
| GAACCTGCATCCGGCCCAAC+CGG | 0.411504 | 5_2:+52873311 | None:intergenic |
| CTGGTTTGGTCTACTGGAGT+TGG | 0.418407 | 5_2:-52869855 | Msa0775760:CDS |
| TAAAGCTCACCTTTGTCAAC+TGG | 0.420834 | 5_2:+52870089 | None:intergenic |
| GCTGTTTGCACGGCCTCCAT+TGG | 0.422580 | 5_2:+52868867 | None:intergenic |
| GAAGGGTTGGTGGTGTTGGG+GGG | 0.423190 | 5_2:+52873453 | None:intergenic |
| GTTCTCGGCACCGGTTGGGC+CGG | 0.434816 | 5_2:-52873321 | Msa0775760:CDS |
| TTGATGATGTCTGACGTTCC+AGG | 0.436902 | 5_2:-52870637 | Msa0775760:intron |
| CGCGTGGTGGTTCTCGGCAC+CGG | 0.440404 | 5_2:-52873330 | Msa0775760:CDS |
| TGCAATTACTAACTTATCAT+AGG | 0.442331 | 5_2:+52870768 | None:intergenic |
| CTGTTACATTGTGTAGTTGT+CGG | 0.443614 | 5_2:-52870509 | Msa0775760:CDS |
| GGATGCAGGGATTTCGGAAG+AGG | 0.444020 | 5_2:-52870543 | Msa0775760:intron |
| CCTACGGGAGTTGAATTTAG+TGG | 0.445405 | 5_2:-52870479 | Msa0775760:CDS |
| ATGGTACTGAGGTTCCTTAC+GGG | 0.447476 | 5_2:-52869881 | Msa0775760:CDS |
| CGCTTCTCCACTTCAACACC+CGG | 0.450000 | 5_2:-52873411 | Msa0775760:CDS |
| TAGTCAATTTCTTTATTTGA+GGG | 0.450473 | 5_2:+52867936 | None:intergenic |
| GAACACAGACACTGGATCCT+TGG | 0.451339 | 5_2:-52870804 | Msa0775760:CDS |
| ATCTAACTCGTGTCATTAGC+TGG | 0.452596 | 5_2:-52868518 | Msa0775760:CDS |
| TATCCATGTTACTTTGATTG+AGG | 0.453761 | 5_2:-52870396 | Msa0775760:intron |
| GCGAACCGGAGCAGTTGAAC+CGG | 0.458952 | 5_2:+52873392 | None:intergenic |
| AAGAGTGAGAGATGAAGGGT+TGG | 0.459682 | 5_2:+52873440 | None:intergenic |
| CACCTTTGTCAACTGGTTGG+TGG | 0.460527 | 5_2:+52870096 | None:intergenic |
| GCAGGTTGAATCCTAGCAAC+AGG | 0.465923 | 5_2:+52873165 | None:intergenic |
| CCAGGTTCTTTGGAAATAGC+AGG | 0.466685 | 5_2:+52873147 | None:intergenic |
| TCCTTTCATGAACCTGCATC+CGG | 0.474458 | 5_2:+52873302 | None:intergenic |
| CCGGTTCGCTATGCGGCTCT+CGG | 0.474842 | 5_2:-52873378 | Msa0775760:CDS |
| CCGAGAGCCGCATAGCGAAC+CGG | 0.477016 | 5_2:+52873378 | None:intergenic |
| AACACCCGGTTCAACTGCTC+CGG | 0.480115 | 5_2:-52873397 | Msa0775760:CDS |
| TTCATATTCTGCTTATATCA+CGG | 0.485820 | 5_2:+52868445 | None:intergenic |
| ATAATGTCACCAACTTTGTT+GGG | 0.485842 | 5_2:+52873636 | None:intergenic |
| CAACAGTTGCCATGCTTCCA+AGG | 0.486811 | 5_2:+52868803 | None:intergenic |
| GGTGGTTCTCGGCACCGGTT+GGG | 0.487204 | 5_2:-52873325 | Msa0775760:CDS |
| GATGGTACTGAGGTTCCTTA+CGG | 0.488055 | 5_2:-52869882 | Msa0775760:CDS |
| TTTCTCCTACAGGATGCAAA+AGG | 0.488236 | 5_2:-52868588 | Msa0775760:intron |
| ATGCAGGTTCATGAAAGGAT+TGG | 0.488272 | 5_2:-52873298 | Msa0775760:CDS |
| GGCTTCTCGTGTGGTTTGGT+TGG | 0.489674 | 5_2:+52873354 | None:intergenic |
| TGGTGGTTCTCGGCACCGGT+TGG | 0.491874 | 5_2:-52873326 | Msa0775760:CDS |
| CTTCCTTTGATGACCGACTC+AGG | 0.494060 | 5_2:-52870126 | Msa0775760:CDS |
| TATCTTTCATGCTGTTTGCA+CGG | 0.494328 | 5_2:+52868857 | None:intergenic |
| GCGTGGCTTCTCGTGTGGTT+TGG | 0.494416 | 5_2:+52873350 | None:intergenic |
| AAAGGAAGACAATATCTCAT+TGG | 0.494833 | 5_2:+52870141 | None:intergenic |
| GTAGTCAATTTCTTTATTTG+AGG | 0.494902 | 5_2:+52867935 | None:intergenic |
| TAAGTTACTTGGGCAAGAGC+TGG | 0.495694 | 5_2:+52869450 | None:intergenic |
| CAGTTGGTTTGTTTGGCGCT+CGG | 0.501757 | 5_2:-52868544 | Msa0775760:CDS |
| CATTGTGTAGTTGTCGGAGG+TGG | 0.502020 | 5_2:-52870503 | Msa0775760:CDS |
| GCAAAAGGATTGTCTCTAGC+AGG | 0.508390 | 5_2:-52868573 | Msa0775760:CDS |
| TCGTGAAGTTTACCATGCAC+AGG | 0.511255 | 5_2:-52870686 | Msa0775760:CDS |
| AGTGGATTTGTTGAAAGTAC+CGG | 0.512050 | 5_2:-52869486 | Msa0775760:CDS |
| GTTGTCGGAGGTGGTCCTAC+GGG | 0.516952 | 5_2:-52870494 | Msa0775760:CDS |
| AGCATGAAAGATATAGACTT+GGG | 0.517333 | 5_2:-52868847 | Msa0775760:CDS |
| CAGTTTGTGTACAAGCACCT+TGG | 0.518550 | 5_2:-52868820 | Msa0775760:CDS |
| AGTGAGAGATGAAGGGTTGG+TGG | 0.519739 | 5_2:+52873443 | None:intergenic |
| ACCACGCGTGGCTTCTCGTG+TGG | 0.520725 | 5_2:+52873345 | None:intergenic |
| GGGTTTGAGAAGTTGTTTCG+TGG | 0.521730 | 5_2:+52873473 | None:intergenic |
| TAGGTGAAATACTTTCAGAA+TGG | 0.525225 | 5_2:-52868412 | Msa0775760:three_prime_UTR |
| AGTTGTCGGAGGTGGTCCTA+CGG | 0.526094 | 5_2:-52870495 | Msa0775760:CDS |
| CCTGCTATTTCCAAAGAACC+TGG | 0.527740 | 5_2:-52873147 | Msa0775760:CDS |
| TTTCGGAAGAGGAGAAGAAA+AGG | 0.527798 | 5_2:-52870532 | Msa0775760:CDS |
| GACAAGCAGCCCAACAAAGT+TGG | 0.530024 | 5_2:-52873645 | Msa0775760:five_prime_UTR |
| CTAGATCTCCCTAAATCTCC+TGG | 0.530595 | 5_2:-52869810 | Msa0775760:CDS |
| TGGGCAAGAGCTGGAAGTGT+TGG | 0.530653 | 5_2:+52869459 | None:intergenic |
| AGAAATTGTTGGCACTTGAA+AGG | 0.531295 | 5_2:-52868219 | Msa0775760:three_prime_UTR |
| GCAGCCTTGTTAAACAAAGT+AGG | 0.539948 | 5_2:-52868895 | Msa0775760:CDS |
| CAGCATGAAAGATATAGACT+TGG | 0.541359 | 5_2:-52868848 | Msa0775760:CDS |
| GAAATGAAGTTCCAAAGATG+TGG | 0.541458 | 5_2:+52873586 | None:intergenic |
| CTGTTGCTGAACCTGTTGCT+AGG | 0.543077 | 5_2:-52873176 | Msa0775760:CDS |
| CTTGGAAGCATGGCAACTGT+TGG | 0.546016 | 5_2:-52868802 | Msa0775760:CDS |
| TCAGGAGTGCGACTTGTTCG+AGG | 0.547733 | 5_2:-52869945 | Msa0775760:CDS |
| GAGAAGATATCTTGTACTGA+AGG | 0.549464 | 5_2:+52869522 | None:intergenic |
| TGTATCCCCGCGTAATCACA+TGG | 0.555108 | 5_2:-52873250 | Msa0775760:CDS |
| AACTCCATGAATTCCAAAAG+TGG | 0.557244 | 5_2:+52870729 | None:intergenic |
| AGAGAAGAGTGAGAGATGAA+GGG | 0.558663 | 5_2:+52873436 | None:intergenic |
| GCCGGATGCAGGTTCATGAA+AGG | 0.560983 | 5_2:-52873303 | Msa0775760:CDS |
| AAAAGATAGCTTGAAGAGGA+AGG | 0.567409 | 5_2:-52868187 | Msa0775760:three_prime_UTR |
| TCCATGAATTCCAAAAGTGG+TGG | 0.567774 | 5_2:+52870732 | None:intergenic |
| TTCACCTACTTTGTTTAACA+AGG | 0.568346 | 5_2:+52868891 | None:intergenic |
| AACTGAAGGAACACAGACAC+TGG | 0.572704 | 5_2:-52870812 | Msa0775760:CDS |
| GTACAAGCACCTTGGAAGCA+TGG | 0.575288 | 5_2:-52868812 | Msa0775760:CDS |
| TCCCTAAATCTCCTGGTGGA+AGG | 0.576208 | 5_2:-52869803 | Msa0775760:intron |
| TAGGAGATTGTAAACTTCCA+AGG | 0.576226 | 5_2:+52870787 | None:intergenic |
| GTGCCTGAGTCGGTCATCAA+AGG | 0.577551 | 5_2:+52870123 | None:intergenic |
| CGTCAGACATCATCAAATTG+AGG | 0.578854 | 5_2:+52870644 | None:intergenic |
| TGCGACGAATTTCCTGTGCA+TGG | 0.580363 | 5_2:+52870674 | None:intergenic |
| GAAATACTTTCAGAATGGCT+AGG | 0.580716 | 5_2:-52868407 | Msa0775760:three_prime_UTR |
| AGTTGAACCGGGTGTTGAAG+TGG | 0.585868 | 5_2:+52873404 | None:intergenic |
| GGCAACTGTTGGAAGTTACA+AGG | 0.589456 | 5_2:-52868791 | Msa0775760:CDS |
| ACACAAGTAGAAGCCAAAAG+AGG | 0.590268 | 5_2:+52873219 | None:intergenic |
| AGCGAGTGGATAAAAGGTGA+TGG | 0.590313 | 5_2:+52869831 | None:intergenic |
| ACATTACCTTGTTCTGTCTG+AGG | 0.591265 | 5_2:+52868758 | None:intergenic |
| CGAACCGGAGCAGTTGAACC+GGG | 0.603605 | 5_2:+52873393 | None:intergenic |
| GACCAAACCAGCAACCCGTA+AGG | 0.603661 | 5_2:+52869867 | None:intergenic |
| CCATGAATTCCAAAAGTGGT+GGG | 0.610117 | 5_2:+52870733 | None:intergenic |
| AGTAGACCTCAGACAGAACA+AGG | 0.610589 | 5_2:-52868764 | Msa0775760:intron |
| ACTCAAAAGATAGCTTGAAG+AGG | 0.611367 | 5_2:-52868191 | Msa0775760:three_prime_UTR |
| ATTTAGGGAGATCTAGCGAG+TGG | 0.611993 | 5_2:+52869817 | None:intergenic |
| AAATGAAGTTCCAAAGATGT+GGG | 0.614536 | 5_2:+52873587 | None:intergenic |
| ACAGGATCGGTATTGATGAG+TGG | 0.621936 | 5_2:-52869554 | Msa0775760:intron |
| GCTCACCTTTGTCAACTGGT+TGG | 0.622023 | 5_2:+52870093 | None:intergenic |
| ACACGAGAAGCCACGCGTGG+TGG | 0.626869 | 5_2:-52873343 | Msa0775760:CDS |
| TGAAAACCATGTGATTACGC+GGG | 0.630073 | 5_2:+52873244 | None:intergenic |
| AACAAAGTAGGTGAAGCCAA+TGG | 0.630315 | 5_2:-52868883 | Msa0775760:CDS |
| TGATACCAGTACAATTAGCA+AGG | 0.631909 | 5_2:+52873112 | None:intergenic |
| AACTGCTCCGGTTCGCTATG+CGG | 0.633722 | 5_2:-52873385 | Msa0775760:CDS |
| TCAGAGATATGCTCATGTGA+AGG | 0.636417 | 5_2:-52870423 | Msa0775760:CDS |
| CCACTAAATTCAACTCCCGT+AGG | 0.642737 | 5_2:+52870479 | None:intergenic |
| TTCTCAATAGGTGACTGCAG+TGG | 0.644093 | 5_2:-52869504 | Msa0775760:CDS |
| CAATGTGAGACTGTAACTGA+AGG | 0.645608 | 5_2:-52870826 | Msa0775760:CDS |
| GAGGTTTCTAAACAAAGACA+TGG | 0.647360 | 5_2:+52873515 | None:intergenic |
| GTGCCGAGAACCACCACGCG+TGG | 0.648454 | 5_2:+52873333 | None:intergenic |
| CCGCAGGTAGCAGAGAGGCA+AGG | 0.649338 | 5_2:-52868928 | Msa0775760:intron |
| GTGAAAACCATGTGATTACG+CGG | 0.655602 | 5_2:+52873243 | None:intergenic |
| TATACTTAACGATGGTACTG+AGG | 0.661927 | 5_2:-52869892 | Msa0775760:CDS |
| AGCGCCAAACAAACCAACTG+AGG | 0.663425 | 5_2:+52868547 | None:intergenic |
| ACCACACGAGAAGCCACGCG+TGG | 0.664281 | 5_2:-52873346 | Msa0775760:CDS |
| TGCCACCAACCAGTTGACAA+AGG | 0.666218 | 5_2:-52870098 | Msa0775760:intron |
| TATCAATGCTGATAAACATG+AGG | 0.672808 | 5_2:-52873094 | Msa0775760:intron |
| TTACATTGTGTAGTTGTCGG+AGG | 0.672880 | 5_2:-52870506 | Msa0775760:CDS |
| AAAGTAGGTGAAGCCAATGG+AGG | 0.673473 | 5_2:-52868880 | Msa0775760:CDS |
| GAGTAAACAAACCTTCCACC+AGG | 0.674755 | 5_2:+52869792 | None:intergenic |
| GAAAACCATGTGATTACGCG+GGG | 0.676500 | 5_2:+52873245 | None:intergenic |
| TTCTAGTTAGCTGAACAACA+AGG | 0.678547 | 5_2:-52868264 | Msa0775760:three_prime_UTR |
| AAGAAGATTATACTTAACGA+TGG | 0.679351 | 5_2:-52869900 | Msa0775760:CDS |
| TGGTGGCATAGTGCCTGAGT+CGG | 0.683066 | 5_2:+52870113 | None:intergenic |
| GCATGAAAGATATAGACTTG+GGG | 0.685130 | 5_2:-52868846 | Msa0775760:CDS |
| ATTCTATGTAGCTATTAACT+GGG | 0.685511 | 5_2:-52868487 | Msa0775760:CDS |
| ATACCTCAATCAAAGTAACA+TGG | 0.690821 | 5_2:+52870393 | None:intergenic |
| TAACTCGTGTCATTAGCTGG+AGG | 0.697962 | 5_2:-52868515 | Msa0775760:CDS |
| GATCTCCCTAAATCTCCTGG+TGG | 0.707187 | 5_2:-52869807 | Msa0775760:CDS |
| GAATTCCGCAGGTAGCAGAG+AGG | 0.741390 | 5_2:-52868933 | Msa0775760:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATATATATATATT+TGG | + | chr5_2:52871935-52871954 | None:intergenic | 0.0% |
| !!! | TTTTATAATTGATATATTCA+GGG | + | chr5_2:52869881-52869900 | None:intergenic | 10.0% |
| !!! | TTTTTATAATTGATATATTC+AGG | + | chr5_2:52869882-52869901 | None:intergenic | 10.0% |
| !!! | ATATAATTGATTTTAAGACT+AGG | - | chr5_2:52869467-52869486 | Msa0775760:CDS | 15.0% |
| !! | TATGAAATTGAATTTCAATT+GGG | + | chr5_2:52869788-52869807 | None:intergenic | 15.0% |
| !! | ATATGAAATTGAATTTCAAT+TGG | + | chr5_2:52869789-52869808 | None:intergenic | 15.0% |
| !! | TTTACAATTCTTATGAAAAT+AGG | - | chr5_2:52870553-52870572 | Msa0775760:intron | 15.0% |
| !! | TTACAATTCTTATGAAAATA+GGG | - | chr5_2:52870554-52870573 | Msa0775760:intron | 15.0% |
| !! | GAATATGAAGAAAAAAAATT+AGG | - | chr5_2:52873142-52873161 | Msa0775760:CDS | 15.0% |
| !!! | TCTTTTTCTTTTTCTTTGTA+TGG | - | chr5_2:52868508-52868527 | Msa0775760:CDS | 20.0% |
| !! | TTTCAATTTCATTGCTTATA+TGG | - | chr5_2:52868580-52868599 | Msa0775760:intron | 20.0% |
| !!! | TTTTAGATATTTCATTGACT+AGG | - | chr5_2:52868632-52868651 | Msa0775760:intron | 20.0% |
| !! | TGTTACAATGATTAATTTCA+AGG | + | chr5_2:52868807-52868826 | None:intergenic | 20.0% |
| !! | AATTAGCAATTAACTAATCA+AGG | - | chr5_2:52868982-52869001 | Msa0775760:intron | 20.0% |
| !!! | TTTTTTTTTTTGTAATCCGT+GGG | + | chr5_2:52869175-52869194 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGTAATCCG+TGG | + | chr5_2:52869176-52869195 | None:intergenic | 20.0% |
| !! | TGAAAATAGAAACCATTAAA+AGG | - | chr5_2:52869594-52869613 | Msa0775760:intron | 20.0% |
| !!! | TTCTTTTTGCATTTTTTGTA+AGG | - | chr5_2:52869660-52869679 | Msa0775760:intron | 20.0% |
| !! | ATGAAATTGAATTTCAATTG+GGG | + | chr5_2:52869787-52869806 | None:intergenic | 20.0% |
| !! | AAATCAGTTACAGATTAAAA+AGG | + | chr5_2:52871010-52871029 | None:intergenic | 20.0% |
| !!! | TTTTTAATCTGTAACTGATT+TGG | - | chr5_2:52871009-52871028 | Msa0775760:intron | 20.0% |
| !! | TTACAAATTTACCACAAAAT+TGG | + | chr5_2:52871335-52871354 | None:intergenic | 20.0% |
| !! | AATAAACCTAAAACAACTTA+TGG | + | chr5_2:52872439-52872458 | None:intergenic | 20.0% |
| !! | TTTATCTCTTATGATAGAAA+TGG | - | chr5_2:52872526-52872545 | Msa0775760:intron | 20.0% |
| !! | AACTTAATTAAGCACTTATA+AGG | + | chr5_2:52872585-52872604 | None:intergenic | 20.0% |
| !! | ATTAAGTTAATTATCCAAAC+AGG | - | chr5_2:52872597-52872616 | Msa0775760:intron | 20.0% |
| !! | TTAAGTTAATTATCCAAACA+GGG | - | chr5_2:52872598-52872617 | Msa0775760:intron | 20.0% |
| !! | ATAAAATGTCACAACTAAAT+AGG | + | chr5_2:52873213-52873232 | None:intergenic | 20.0% |
| !!! | CATTATTTTGAACATACAAT+TGG | + | chr5_2:52873573-52873592 | None:intergenic | 20.0% |
| !!! | TAGTCAATTTCTTTATTTGA+GGG | + | chr5_2:52873640-52873659 | None:intergenic | 20.0% |
| ! | TTGCTTATATGGTTTAGTTA+TGG | - | chr5_2:52868591-52868610 | Msa0775760:intron | 25.0% |
| ! | TTATATGGTTTAGTTATGGT+TGG | - | chr5_2:52868595-52868614 | Msa0775760:intron | 25.0% |
| ! | TAACTGACTAAATTGTCATT+TGG | - | chr5_2:52868669-52868688 | Msa0775760:intron | 25.0% |
| !! | AACTGACTAAATTGTCATTT+GGG | - | chr5_2:52868670-52868689 | Msa0775760:intron | 25.0% |
| ! | TTAACAAAAGACACATTCTA+GGG | + | chr5_2:52868742-52868761 | None:intergenic | 25.0% |
| ! | ATTAACAAAAGACACATTCT+AGG | + | chr5_2:52868743-52868762 | None:intergenic | 25.0% |
| ! | ATTGTAACATTGTGAATTCT+TGG | - | chr5_2:52868818-52868837 | Msa0775760:CDS | 25.0% |
| ! | AATTCTGATTCTTAGATATC+AGG | + | chr5_2:52868966-52868985 | None:intergenic | 25.0% |
| !! | AATGATTTGTCTCAAACTTT+AGG | - | chr5_2:52869219-52869238 | Msa0775760:intron | 25.0% |
| ! | TAAATCCTCAATACATAGTT+TGG | + | chr5_2:52869436-52869455 | None:intergenic | 25.0% |
| !!! | CATTAAAAGGTACCTTATTT+GGG | - | chr5_2:52869607-52869626 | Msa0775760:intron | 25.0% |
| ! | TAAATTCCAAATCCCAAATA+AGG | + | chr5_2:52869622-52869641 | None:intergenic | 25.0% |
| ! | AACCAAAATGACTATTTACT+CGG | + | chr5_2:52869828-52869847 | None:intergenic | 25.0% |
| !!! | TGCTATTCAGTTTGTTAAAT+TGG | - | chr5_2:52869921-52869940 | Msa0775760:CDS | 25.0% |
| !! | TGTTACAATTTTGTTAGTCA+CGG | + | chr5_2:52870286-52870305 | None:intergenic | 25.0% |
| ! | TGCAATTACTAACTTATCAT+AGG | + | chr5_2:52870808-52870827 | None:intergenic | 25.0% |
| ! | GATAAGTTAGTAATTGCATT+AGG | - | chr5_2:52870810-52870829 | Msa0775760:CDS | 25.0% |
| !!! | AAGCATTATTTTTCAAACAC+AGG | + | chr5_2:52870976-52870995 | None:intergenic | 25.0% |
| ! | CATATTGAACAAACAGTAAA+GGG | + | chr5_2:52871578-52871597 | None:intergenic | 25.0% |
| ! | ACATATTGAACAAACAGTAA+AGG | + | chr5_2:52871579-52871598 | None:intergenic | 25.0% |
| ! | AAGAAGATTATACTTAACGA+TGG | - | chr5_2:52871673-52871692 | Msa0775760:intron | 25.0% |
| !!! | TTGCATTTATTTTCTTTCCA+TGG | - | chr5_2:52871814-52871833 | Msa0775760:intron | 25.0% |
| ! | ACTGTTGCAAAATTTACAAT+TGG | - | chr5_2:52871840-52871859 | Msa0775760:intron | 25.0% |
| ! | ATATGGGTACATATAGTATT+CGG | - | chr5_2:52871875-52871894 | Msa0775760:intron | 25.0% |
| !!! | TTGGTTTTAGTTTAACACTA+TGG | - | chr5_2:52872210-52872229 | Msa0775760:intron | 25.0% |
| ! | AAGCTTATTCATGTCAAATT+AGG | - | chr5_2:52872322-52872341 | Msa0775760:intron | 25.0% |
| ! | AGCTTATTCATGTCAAATTA+GGG | - | chr5_2:52872323-52872342 | Msa0775760:intron | 25.0% |
| !! | GAAGATAAGTTGAAATAAGT+CGG | + | chr5_2:52872359-52872378 | None:intergenic | 25.0% |
| ! | ACTTATTTCAACTTATCTTC+CGG | - | chr5_2:52872359-52872378 | Msa0775760:intron | 25.0% |
| !!! | TTTTTAAAAGCACCAACAAA+AGG | + | chr5_2:52872940-52872959 | None:intergenic | 25.0% |
| ! | ATTCTATGTAGCTATTAACT+GGG | - | chr5_2:52873086-52873105 | Msa0775760:intron | 25.0% |
| ! | TTCATATTCTGCTTATATCA+CGG | + | chr5_2:52873131-52873150 | None:intergenic | 25.0% |
| ! | TTCAATTTGGTAGAAATTGT+TGG | - | chr5_2:52873343-52873362 | Msa0775760:CDS | 25.0% |
| ! | GTTGATATAAACATGAAAAC+TGG | + | chr5_2:52873513-52873532 | None:intergenic | 25.0% |
| !! | GTAGTCAATTTCTTTATTTG+AGG | + | chr5_2:52873641-52873660 | None:intergenic | 25.0% |
| ATAATGTCACCAACTTTGTT+GGG | + | chr5_2:52867940-52867959 | None:intergenic | 30.0% | |
| AAATGAAGTTCCAAAGATGT+GGG | + | chr5_2:52867989-52868008 | None:intergenic | 30.0% | |
| !! | TGAAGAAGTAACTTTTTGAG+AGG | + | chr5_2:52868080-52868099 | None:intergenic | 30.0% |
| TATCAATGCTGATAAACATG+AGG | - | chr5_2:52868479-52868498 | Msa0775760:CDS | 30.0% | |
| GTATGGTATCTAAGCTTATT+TGG | - | chr5_2:52868525-52868544 | Msa0775760:CDS | 30.0% | |
| AGTTATGGTTGGAGAAAAAA+AGG | - | chr5_2:52868606-52868625 | Msa0775760:intron | 30.0% | |
| GTTATGGTTGGAGAAAAAAA+GGG | - | chr5_2:52868607-52868626 | Msa0775760:intron | 30.0% | |
| TAACATTGTGAATTCTTGGT+TGG | - | chr5_2:52868822-52868841 | Msa0775760:CDS | 30.0% | |
| GTGATTCTTACTTTACAAGT+TGG | - | chr5_2:52868920-52868939 | Msa0775760:CDS | 30.0% | |
| !!! | TACTTTACAAGTTGGTTTTG+AGG | - | chr5_2:52868928-52868947 | Msa0775760:intron | 30.0% |
| ACACAAGAATTGTTAGCAAT+TGG | + | chr5_2:52869083-52869102 | None:intergenic | 30.0% | |
| ATTGCTAACAATTCTTGTGT+TGG | - | chr5_2:52869083-52869102 | Msa0775760:intron | 30.0% | |
| TTGCTAACAATTCTTGTGTT+GGG | - | chr5_2:52869084-52869103 | Msa0775760:intron | 30.0% | |
| CTTAATAAGAATGATGAGTG+TGG | - | chr5_2:52869284-52869303 | Msa0775760:intron | 30.0% | |
| !! | TAGAATGTTCTGAAACTAAG+TGG | - | chr5_2:52869556-52869575 | Msa0775760:intron | 30.0% |
| AACTAAGTGGAATTTAGTTG+AGG | - | chr5_2:52869569-52869588 | Msa0775760:intron | 30.0% | |
| !! | CCAAATAAGGTACCTTTTAA+TGG | + | chr5_2:52869609-52869628 | None:intergenic | 30.0% |
| !! | CCATTAAAAGGTACCTTATT+TGG | - | chr5_2:52869606-52869625 | Msa0775760:intron | 30.0% |
| ATACTTGGTTATTGTTGGAT+TGG | - | chr5_2:52869725-52869744 | Msa0775760:intron | 30.0% | |
| ACCAAAATGACTATTTACTC+GGG | + | chr5_2:52869827-52869846 | None:intergenic | 30.0% | |
| TGGTTGTTTAATATGTCTGA+TGG | - | chr5_2:52869843-52869862 | Msa0775760:CDS | 30.0% | |
| !!! | TGTGTTTTAGTTTGTCAGTT+TGG | - | chr5_2:52869956-52869975 | Msa0775760:intron | 30.0% |
| TTGTAACAGAATTCTGACTT+TGG | - | chr5_2:52870298-52870317 | Msa0775760:intron | 30.0% | |
| TGTAACAGAATTCTGACTTT+GGG | - | chr5_2:52870299-52870318 | Msa0775760:intron | 30.0% | |
| CAATATATTCCTAATAGCCT+AGG | - | chr5_2:52870341-52870360 | Msa0775760:intron | 30.0% | |
| AATATCCTAACTAAACTACC+AGG | + | chr5_2:52870436-52870455 | None:intergenic | 30.0% | |
| AGAACAGTGTTATAAAAACC+AGG | + | chr5_2:52870597-52870616 | None:intergenic | 30.0% | |
| ! | TTTTGTTCATTGCTGTCTAA+AGG | + | chr5_2:52870643-52870662 | None:intergenic | 30.0% |
| TTTAGACAGCAATGAACAAA+AGG | - | chr5_2:52870642-52870661 | Msa0775760:CDS | 30.0% | |
| TTAGACAGCAATGAACAAAA+GGG | - | chr5_2:52870643-52870662 | Msa0775760:CDS | 30.0% | |
| !! | TATCCATGTTACTTTGATTG+AGG | - | chr5_2:52871177-52871196 | Msa0775760:intron | 30.0% |
| ATACCTCAATCAAAGTAACA+TGG | + | chr5_2:52871183-52871202 | None:intergenic | 30.0% | |
| CAATTTATTCATGTCTCTTC+AGG | - | chr5_2:52871409-52871428 | Msa0775760:intron | 30.0% | |
| AAAGGAAGACAATATCTCAT+TGG | + | chr5_2:52871435-52871454 | None:intergenic | 30.0% | |
| !!! | GACTTTTTCGTGATATTCAT+AGG | + | chr5_2:52871556-52871575 | None:intergenic | 30.0% |
| AGAAATTTCAACACAAGGAA+AGG | + | chr5_2:52871603-52871622 | None:intergenic | 30.0% | |
| CTGATAGAAATTTCAACACA+AGG | + | chr5_2:52871608-52871627 | None:intergenic | 30.0% | |
| TGTTGAAATTTCTATCAGTC+AGG | - | chr5_2:52871610-52871629 | Msa0775760:intron | 30.0% | |
| ATCTGTATTATCATGAAAGC+AGG | - | chr5_2:52871898-52871917 | Msa0775760:intron | 30.0% | |
| GTACAAGATATCTTCTCAAT+AGG | - | chr5_2:52872057-52872076 | Msa0775760:intron | 30.0% | |
| GAAACCAATGTAAGTTACTT+GGG | + | chr5_2:52872136-52872155 | None:intergenic | 30.0% | |
| TGAAACCAATGTAAGTTACT+TGG | + | chr5_2:52872137-52872156 | None:intergenic | 30.0% | |
| CAAGAAATGAAAGTGATCTT+TGG | + | chr5_2:52872169-52872188 | None:intergenic | 30.0% | |
| TTCAGAATGGAATGTGTTTA+GGG | + | chr5_2:52872247-52872266 | None:intergenic | 30.0% | |
| ATTCAGAATGGAATGTGTTT+AGG | + | chr5_2:52872248-52872267 | None:intergenic | 30.0% | |
| ! | AATGTGTTACTCTCTTTACT+TGG | - | chr5_2:52872265-52872284 | Msa0775760:intron | 30.0% |
| TTTGACATGAATAAGCTTTC+AGG | + | chr5_2:52872320-52872339 | None:intergenic | 30.0% | |
| ATGTCAAATTAGGGTCTATT+TGG | - | chr5_2:52872332-52872351 | Msa0775760:intron | 30.0% | |
| TTTATTTCCATAAGTTCTCC+AGG | - | chr5_2:52872453-52872472 | Msa0775760:intron | 30.0% | |
| ATTCAAGTGGCAATACATTA+AGG | + | chr5_2:52872624-52872643 | None:intergenic | 30.0% | |
| ! | TTCACCTACTTTGTTTAACA+AGG | + | chr5_2:52872685-52872704 | None:intergenic | 30.0% |
| AGCATGAAAGATATAGACTT+GGG | - | chr5_2:52872726-52872745 | Msa0775760:intron | 30.0% | |
| GATTCTATGTAGCTATTAAC+TGG | - | chr5_2:52873085-52873104 | Msa0775760:intron | 30.0% | |
| TAGGTGAAATACTTTCAGAA+TGG | - | chr5_2:52873161-52873180 | Msa0775760:CDS | 30.0% | |
| CTAAATAGGTTTAAGCTCTT+TGG | + | chr5_2:52873199-52873218 | None:intergenic | 30.0% | |
| AAGAGGAAGGCAATAAAATA+TGG | - | chr5_2:52873399-52873418 | Msa0775760:CDS | 30.0% | |
| CAATAAAATATGGCAGTCTT+TGG | - | chr5_2:52873409-52873428 | Msa0775760:CDS | 30.0% | |
| ACACATCAAGATTCAACTTT+AGG | - | chr5_2:52873455-52873474 | Msa0775760:CDS | 30.0% | |
| ! | TCATTGTCTCGTACAATTTT+AGG | + | chr5_2:52873611-52873630 | None:intergenic | 30.0% |
| GATAATGTCACCAACTTTGT+TGG | + | chr5_2:52867941-52867960 | None:intergenic | 35.0% | |
| GAAATGAAGTTCCAAAGATG+TGG | + | chr5_2:52867990-52868009 | None:intergenic | 35.0% | |
| GAGGTTTCTAAACAAAGACA+TGG | + | chr5_2:52868061-52868080 | None:intergenic | 35.0% | |
| GAAAAAAGAACCAGGTTCTT+TGG | + | chr5_2:52868439-52868458 | None:intergenic | 35.0% | |
| TTCTTCCTTGCTAATTGTAC+TGG | - | chr5_2:52868456-52868475 | Msa0775760:CDS | 35.0% | |
| TGATACCAGTACAATTAGCA+AGG | + | chr5_2:52868464-52868483 | None:intergenic | 35.0% | |
| CTTATTTGGACATGTCTATC+AGG | - | chr5_2:52868539-52868558 | Msa0775760:CDS | 35.0% | |
| AGTATGTGTCTTTCGTTTGT+CGG | - | chr5_2:52868775-52868794 | Msa0775760:CDS | 35.0% | |
| ATTGTGAATTCTTGGTTGGA+GGG | - | chr5_2:52868826-52868845 | Msa0775760:CDS | 35.0% | |
| ATTGAACCTAAGACTTTGAG+AGG | + | chr5_2:52869056-52869075 | None:intergenic | 35.0% | |
| CAAGAATTGTTAGCAATTGG+AGG | + | chr5_2:52869080-52869099 | None:intergenic | 35.0% | |
| ! | AACCAGAACAAAGCTTTGTA+TGG | + | chr5_2:52869115-52869134 | None:intergenic | 35.0% |
| ! | TTTGTCTCAAACTTTAGGAG+TGG | - | chr5_2:52869224-52869243 | Msa0775760:intron | 35.0% |
| ATAAGAATGATGAGTGTGGT+TGG | - | chr5_2:52869288-52869307 | Msa0775760:intron | 35.0% | |
| ATGTTGATGTGACTATGATG+TGG | - | chr5_2:52869331-52869350 | Msa0775760:intron | 35.0% | |
| ! | TGAGTTACGACTTTTGCATT+TGG | - | chr5_2:52869370-52869389 | Msa0775760:intron | 35.0% |
| ! | AAGGTACCTTATTTGGGATT+TGG | - | chr5_2:52869613-52869632 | Msa0775760:intron | 35.0% |
| ACCAAGTATCTCACTAGTTA+GGG | + | chr5_2:52869714-52869733 | None:intergenic | 35.0% | |
| AACCAAGTATCTCACTAGTT+AGG | + | chr5_2:52869715-52869734 | None:intergenic | 35.0% | |
| GTGAGATACTTGGTTATTGT+TGG | - | chr5_2:52869720-52869739 | Msa0775760:intron | 35.0% | |
| AAATGACTATTTACTCGGGT+CGG | + | chr5_2:52869823-52869842 | None:intergenic | 35.0% | |
| ! | ACCCGAGTAAATAGTCATTT+TGG | - | chr5_2:52869823-52869842 | Msa0775760:CDS | 35.0% |
| GATATATTCAGGGACTATAG+TGG | + | chr5_2:52869871-52869890 | None:intergenic | 35.0% | |
| ATAGCAAAAGACGCATTTGA+AGG | + | chr5_2:52869907-52869926 | None:intergenic | 35.0% | |
| TAACATTGTGACTTCTTCGT+TGG | - | chr5_2:52869998-52870017 | Msa0775760:intron | 35.0% | |
| AACATTGTGACTTCTTCGTT+GGG | - | chr5_2:52869999-52870018 | Msa0775760:intron | 35.0% | |
| GTCATAACTCTAAGCAACAA+GGG | + | chr5_2:52870052-52870071 | None:intergenic | 35.0% | |
| TGTCATAACTCTAAGCAACA+AGG | + | chr5_2:52870053-52870072 | None:intergenic | 35.0% | |
| CTGAGATGCATAGAAAGTAA+TGG | - | chr5_2:52870113-52870132 | Msa0775760:CDS | 35.0% | |
| ! | CAATTTTGTTAGTCACGGTT+AGG | + | chr5_2:52870281-52870300 | None:intergenic | 35.0% |
| ! | AGAATTCTGACTTTGGGAAA+AGG | - | chr5_2:52870305-52870324 | Msa0775760:intron | 35.0% |
| ! | GAATTCTGACTTTGGGAAAA+GGG | - | chr5_2:52870306-52870325 | Msa0775760:intron | 35.0% |
| TTTGCTGCTAAGAAAGAAGA+TGG | - | chr5_2:52870372-52870391 | Msa0775760:intron | 35.0% | |
| TTGCTGCTAAGAAAGAAGAT+GGG | - | chr5_2:52870373-52870392 | Msa0775760:intron | 35.0% | |
| AACACAATGATTACTCGGTT+TGG | + | chr5_2:52870412-52870431 | None:intergenic | 35.0% | |
| CAGGAAACACAATGATTACT+CGG | + | chr5_2:52870417-52870436 | None:intergenic | 35.0% | |
| TGTTTCCTGGTAGTTTAGTT+AGG | - | chr5_2:52870428-52870447 | Msa0775760:CDS | 35.0% | |
| AATCACAGTGCAGCTTAATT+TGG | - | chr5_2:52870696-52870715 | Msa0775760:CDS | 35.0% | |
| ATCACAGTGCAGCTTAATTT+GGG | - | chr5_2:52870697-52870716 | Msa0775760:CDS | 35.0% | |
| !!! | AGTCTGACACATTGTTTTGA+AGG | - | chr5_2:52870722-52870741 | Msa0775760:CDS | 35.0% |
| TAGGAGATTGTAAACTTCCA+AGG | + | chr5_2:52870789-52870808 | None:intergenic | 35.0% | |
| AACTCCATGAATTCCAAAAG+TGG | + | chr5_2:52870847-52870866 | None:intergenic | 35.0% | |
| CTGTTACATTGTGTAGTTGT+CGG | - | chr5_2:52871064-52871083 | Msa0775760:intron | 35.0% | |
| TGAATTGCTGACAATGACAA+CGG | + | chr5_2:52871268-52871287 | None:intergenic | 35.0% | |
| ! | ATTGGCTTCTATGAACTCTA+AGG | + | chr5_2:52871317-52871336 | None:intergenic | 35.0% |
| ! | GTTCATAGAAGCCAATTTTG+TGG | - | chr5_2:52871321-52871340 | Msa0775760:intron | 35.0% |
| TATACTTAACGATGGTACTG+AGG | - | chr5_2:52871681-52871700 | Msa0775760:intron | 35.0% | |
| ! | AATTTTGCAACAGTTGTCCA+TGG | + | chr5_2:52871834-52871853 | None:intergenic | 35.0% |
| ! | ATTGGCAGCTGATTTCTATA+TGG | - | chr5_2:52871858-52871877 | Msa0775760:intron | 35.0% |
| ! | TTGGCAGCTGATTTCTATAT+GGG | - | chr5_2:52871859-52871878 | Msa0775760:intron | 35.0% |
| GAGAAGATATCTTGTACTGA+AGG | + | chr5_2:52872054-52872073 | None:intergenic | 35.0% | |
| !! | AGTGGATTTGTTGAAAGTAC+CGG | - | chr5_2:52872087-52872106 | Msa0775760:intron | 35.0% |
| TTGAATTCCTGACAATGTGT+AGG | - | chr5_2:52872186-52872205 | Msa0775760:intron | 35.0% | |
| AGAGAGTAACACATTCAGAA+TGG | + | chr5_2:52872260-52872279 | None:intergenic | 35.0% | |
| TTACTCTCTTTACTTGGTAG+AGG | - | chr5_2:52872271-52872290 | Msa0775760:intron | 35.0% | |
| ATGAATAAGCTTTCAGGCAA+AGG | + | chr5_2:52872314-52872333 | None:intergenic | 35.0% | |
| AGTCTCACAAGTGTTTATAC+CGG | + | chr5_2:52872381-52872400 | None:intergenic | 35.0% | |
| AAACACTTGTGAGACTGTTT+AGG | - | chr5_2:52872385-52872404 | Msa0775760:intron | 35.0% | |
| !! | GCATGTCCATAAGTTGTTTT+AGG | - | chr5_2:52872430-52872449 | Msa0775760:intron | 35.0% |
| ! | TATCTTTCATGCTGTTTGCA+CGG | + | chr5_2:52872719-52872738 | None:intergenic | 35.0% |
| CAGCATGAAAGATATAGACT+TGG | - | chr5_2:52872725-52872744 | Msa0775760:intron | 35.0% | |
| GCATGAAAGATATAGACTTG+GGG | - | chr5_2:52872727-52872746 | Msa0775760:intron | 35.0% | |
| ! | CATTCCTTAACCTTTTGTTG+AGG | - | chr5_2:52872842-52872861 | Msa0775760:intron | 35.0% |
| TAAGCCTCAACAAAAGGTTA+AGG | + | chr5_2:52872849-52872868 | None:intergenic | 35.0% | |
| GCATAGTATCCAAGTACAAA+GGG | - | chr5_2:52872881-52872900 | Msa0775760:intron | 35.0% | |
| ! | TTCACTAACTTTTCTCCTAC+AGG | - | chr5_2:52872975-52872994 | Msa0775760:intron | 35.0% |
| !!! | TGGGCTACAACTTTTGTTTT+TGG | - | chr5_2:52873105-52873124 | Msa0775760:CDS | 35.0% |
| GAAATACTTTCAGAATGGCT+AGG | - | chr5_2:52873166-52873185 | Msa0775760:CDS | 35.0% | |
| ! | TTCTAGTTAGCTGAACAACA+AGG | - | chr5_2:52873309-52873328 | Msa0775760:CDS | 35.0% |
| GGAACTGTACTTGTTCAATT+TGG | - | chr5_2:52873330-52873349 | Msa0775760:CDS | 35.0% | |
| AGAAATTGTTGGCACTTGAA+AGG | - | chr5_2:52873354-52873373 | Msa0775760:CDS | 35.0% | |
| ACTCAAAAGATAGCTTGAAG+AGG | - | chr5_2:52873382-52873401 | Msa0775760:CDS | 35.0% | |
| AAAAGATAGCTTGAAGAGGA+AGG | - | chr5_2:52873386-52873405 | Msa0775760:CDS | 35.0% | |
| !!! | GGCTGCTTGTCTGTTTTTAT+GGG | + | chr5_2:52867919-52867938 | None:intergenic | 40.0% |
| AGAGAAGAGTGAGAGATGAA+GGG | + | chr5_2:52868140-52868159 | None:intergenic | 40.0% | |
| ATGCAGGTTCATGAAAGGAT+TGG | - | chr5_2:52868275-52868294 | Msa0775760:three_prime_UTR | 40.0% | |
| TGAAAACCATGTGATTACGC+GGG | + | chr5_2:52868332-52868351 | None:intergenic | 40.0% | |
| GTGAAAACCATGTGATTACG+CGG | + | chr5_2:52868333-52868352 | None:intergenic | 40.0% | |
| ! | CATGGTTTTCACACCTCTTT+TGG | - | chr5_2:52868341-52868360 | Msa0775760:intron | 40.0% |
| ACACAAGTAGAAGCCAAAAG+AGG | + | chr5_2:52868357-52868376 | None:intergenic | 40.0% | |
| !!! | CTTTTGGCTTCTACTTGTGT+TGG | - | chr5_2:52868357-52868376 | Msa0775760:intron | 40.0% |
| GCAAGGAAGAAAAAAGAACC+AGG | + | chr5_2:52868447-52868466 | None:intergenic | 40.0% | |
| CATTGTGAATTCTTGGTTGG+AGG | - | chr5_2:52868825-52868844 | Msa0775760:CDS | 40.0% | |
| TGGAGAAAAGCTTAAACTGC+AGG | - | chr5_2:52868856-52868875 | Msa0775760:CDS | 40.0% | |
| ATATGTAAACCCCCAAGCAT+TGG | - | chr5_2:52869010-52869029 | Msa0775760:intron | 40.0% | |
| !! | GACCATACAAAGCTTTGTTC+TGG | - | chr5_2:52869110-52869129 | Msa0775760:intron | 40.0% |
| AATCCCACCGTTAACTAACA+GGG | + | chr5_2:52869149-52869168 | None:intergenic | 40.0% | |
| TAATCCCACCGTTAACTAAC+AGG | + | chr5_2:52869150-52869169 | None:intergenic | 40.0% | |
| CTCAATACATAGTTTGGCAG+AGG | + | chr5_2:52869430-52869449 | None:intergenic | 40.0% | |
| CTCTGCCAAACTATGTATTG+AGG | - | chr5_2:52869428-52869447 | Msa0775760:intron | 40.0% | |
| ! | TGTGCTGCAAAATGCGTTTT+TGG | - | chr5_2:52869494-52869513 | Msa0775760:CDS | 40.0% |
| ACTAGTTAGGGTAGGATGAA+AGG | + | chr5_2:52869702-52869721 | None:intergenic | 40.0% | |
| AGTATCTCACTAGTTAGGGT+AGG | + | chr5_2:52869710-52869729 | None:intergenic | 40.0% | |
| ACCCTAACTAGTGAGATACT+TGG | - | chr5_2:52869710-52869729 | Msa0775760:intron | 40.0% | |
| CTTCGTTGGGTGTTCATTAT+TGG | - | chr5_2:52870012-52870031 | Msa0775760:intron | 40.0% | |
| ! | TGATTTGCATAAGAGCACAG+TGG | - | chr5_2:52870211-52870230 | Msa0775760:intron | 40.0% |
| ATTCCTAATAGCCTAGGACT+TGG | - | chr5_2:52870347-52870366 | Msa0775760:intron | 40.0% | |
| AAACCAAGTCCTAGGCTATT+AGG | + | chr5_2:52870353-52870372 | None:intergenic | 40.0% | |
| TGCTGCTAAGAAAGAAGATG+GGG | - | chr5_2:52870374-52870393 | Msa0775760:intron | 40.0% | |
| CGAGTAATCATTGTGTTTCC+TGG | - | chr5_2:52870415-52870434 | Msa0775760:CDS | 40.0% | |
| CAATGTGAGACTGTAACTGA+AGG | - | chr5_2:52870747-52870766 | Msa0775760:CDS | 40.0% | |
| CCATGAATTCCAAAAGTGGT+GGG | + | chr5_2:52870843-52870862 | None:intergenic | 40.0% | |
| TCCATGAATTCCAAAAGTGG+TGG | + | chr5_2:52870844-52870863 | None:intergenic | 40.0% | |
| CGTCAGACATCATCAAATTG+AGG | + | chr5_2:52870932-52870951 | None:intergenic | 40.0% | |
| CAGGAAAATTATCGCAAACC+TGG | + | chr5_2:52870957-52870976 | None:intergenic | 40.0% | |
| !! | TCTGTAACTGATTTGGATGC+AGG | - | chr5_2:52871016-52871035 | Msa0775760:intron | 40.0% |
| !! | CTGTAACTGATTTGGATGCA+GGG | - | chr5_2:52871017-52871036 | Msa0775760:intron | 40.0% |
| ! | TGATTTGGATGCAGGGATTT+CGG | - | chr5_2:52871024-52871043 | Msa0775760:intron | 40.0% |
| TTTCGGAAGAGGAGAAGAAA+AGG | - | chr5_2:52871041-52871060 | Msa0775760:intron | 40.0% | |
| TTACATTGTGTAGTTGTCGG+AGG | - | chr5_2:52871067-52871086 | Msa0775760:intron | 40.0% | |
| TCAGAGATATGCTCATGTGA+AGG | - | chr5_2:52871150-52871169 | Msa0775760:intron | 40.0% | |
| TAAAGCTCACCTTTGTCAAC+TGG | + | chr5_2:52871487-52871506 | None:intergenic | 40.0% | |
| AGATCTAGCGAGTGGATAAA+AGG | + | chr5_2:52871751-52871770 | None:intergenic | 40.0% | |
| TCATGAAAGCAGGATCACAT+TGG | - | chr5_2:52871908-52871927 | Msa0775760:intron | 40.0% | |
| GTACAAAGTTCTCTCTTCAC+AGG | - | chr5_2:52872001-52872020 | Msa0775760:intron | 40.0% | |
| AAGTTCTCTCTTCACAGGAT+CGG | - | chr5_2:52872006-52872025 | Msa0775760:intron | 40.0% | |
| CTTGCCCAAGTAACTTACAT+TGG | - | chr5_2:52872129-52872148 | Msa0775760:intron | 40.0% | |
| TTCCTGACAATGTGTAGGTT+TGG | - | chr5_2:52872191-52872210 | Msa0775760:intron | 40.0% | |
| AACCAAACCTACACATTGTC+AGG | + | chr5_2:52872196-52872215 | None:intergenic | 40.0% | |
| AGACTGTTTAGGAGAGCTTA+TGG | - | chr5_2:52872396-52872415 | Msa0775760:intron | 40.0% | |
| AAGCTATCCTGGAGAACTTA+TGG | + | chr5_2:52872463-52872482 | None:intergenic | 40.0% | |
| CAATACATTAAGGCCCTGTT+TGG | + | chr5_2:52872614-52872633 | None:intergenic | 40.0% | |
| !! | GCAGCCTTGTTAAACAAAGT+AGG | - | chr5_2:52872678-52872697 | Msa0775760:intron | 40.0% |
| AACAAAGTAGGTGAAGCCAA+TGG | - | chr5_2:52872690-52872709 | Msa0775760:intron | 40.0% | |
| ACATTACCTTGTTCTGTCTG+AGG | + | chr5_2:52872818-52872837 | None:intergenic | 40.0% | |
| ! | ACCTTTTGTTGAGGCTTATC+TGG | - | chr5_2:52872851-52872870 | Msa0775760:intron | 40.0% |
| ACCAGATAAGCCTCAACAAA+AGG | + | chr5_2:52872855-52872874 | None:intergenic | 40.0% | |
| CGCATAGTATCCAAGTACAA+AGG | - | chr5_2:52872880-52872899 | Msa0775760:intron | 40.0% | |
| TTTCTCCTACAGGATGCAAA+AGG | - | chr5_2:52872985-52873004 | Msa0775760:intron | 40.0% | |
| ! | ACAATCCTTTTGCATCCTGT+AGG | + | chr5_2:52872993-52873012 | None:intergenic | 40.0% |
| !! | GTTTCCTCAGTTGGTTTGTT+TGG | - | chr5_2:52873022-52873041 | Msa0775760:intron | 40.0% |
| ! | ATCTAACTCGTGTCATTAGC+TGG | - | chr5_2:52873055-52873074 | Msa0775760:intron | 40.0% |
| !! | GCTTTATTTGTTTGCATCGC+AGG | - | chr5_2:52873260-52873279 | Msa0775760:CDS | 40.0% |
| GCATCGCAGGTCATTATTAA+AGG | - | chr5_2:52873273-52873292 | Msa0775760:CDS | 40.0% | |
| !!! | GGGCTGCTTGTCTGTTTTTA+TGG | + | chr5_2:52867920-52867939 | None:intergenic | 45.0% |
| ATCTGATCAGCCCACATCTT+TGG | - | chr5_2:52867976-52867995 | Msa0775760:three_prime_UTR | 45.0% | |
| ! | GGGTTTGAGAAGTTGTTTCG+TGG | + | chr5_2:52868103-52868122 | None:intergenic | 45.0% |
| AAGAGTGAGAGATGAAGGGT+TGG | + | chr5_2:52868136-52868155 | None:intergenic | 45.0% | |
| GAGAGAAGAGTGAGAGATGA+AGG | + | chr5_2:52868141-52868160 | None:intergenic | 45.0% | |
| TCCTTTCATGAACCTGCATC+CGG | + | chr5_2:52868274-52868293 | None:intergenic | 45.0% | |
| GAAAACCATGTGATTACGCG+GGG | + | chr5_2:52868331-52868350 | None:intergenic | 45.0% | |
| ! | CCAGGTTCTTTGGAAATAGC+AGG | + | chr5_2:52868429-52868448 | None:intergenic | 45.0% |
| !! | CCTGCTATTTCCAAAGAACC+TGG | - | chr5_2:52868426-52868445 | Msa0775760:three_prime_UTR | 45.0% |
| ! | GTGTCTTTCGTTTGTCGGTT+TGG | - | chr5_2:52868780-52868799 | Msa0775760:CDS | 45.0% |
| ACATCACCAGACCAATGCTT+GGG | + | chr5_2:52869024-52869043 | None:intergenic | 45.0% | |
| TACATCACCAGACCAATGCT+TGG | + | chr5_2:52869025-52869044 | None:intergenic | 45.0% | |
| !! | AAGCATTGGTCTGGTGATGT+AGG | - | chr5_2:52869024-52869043 | Msa0775760:intron | 45.0% |
| ATCGCTCCTCTCAAAGTCTT+AGG | - | chr5_2:52869047-52869066 | Msa0775760:intron | 45.0% | |
| TTGACCCCCCTGTTAGTTAA+CGG | - | chr5_2:52869139-52869158 | Msa0775760:intron | 45.0% | |
| ATCCCACCGTTAACTAACAG+GGG | + | chr5_2:52869148-52869167 | None:intergenic | 45.0% | |
| ! | GTCTCAAACTTTAGGAGTGG+TGG | - | chr5_2:52869227-52869246 | Msa0775760:intron | 45.0% |
| AGCAGCAAAAACCAAGTCCT+AGG | + | chr5_2:52870361-52870380 | None:intergenic | 45.0% | |
| ! | GTGAAACATCGTCACTTTCC+TGG | - | chr5_2:52870576-52870595 | Msa0775760:intron | 45.0% |
| AACTGAAGGAACACAGACAC+TGG | - | chr5_2:52870761-52870780 | Msa0775760:CDS | 45.0% | |
| !!! | CCCACCACTTTTGGAATTCA+TGG | - | chr5_2:52870840-52870859 | Msa0775760:intron | 45.0% |
| TCGTGAAGTTTACCATGCAC+AGG | - | chr5_2:52870887-52870906 | Msa0775760:intron | 45.0% | |
| !! | TTGATGATGTCTGACGTTCC+AGG | - | chr5_2:52870936-52870955 | Msa0775760:intron | 45.0% |
| CCACTAAATTCAACTCCCGT+AGG | + | chr5_2:52871097-52871116 | None:intergenic | 45.0% | |
| CCTACGGGAGTTGAATTTAG+TGG | - | chr5_2:52871094-52871113 | Msa0775760:intron | 45.0% | |
| ! | GATGGTACTGAGGTTCCTTA+CGG | - | chr5_2:52871691-52871710 | Msa0775760:intron | 45.0% |
| ! | ATGGTACTGAGGTTCCTTAC+GGG | - | chr5_2:52871692-52871711 | Msa0775760:intron | 45.0% |
| AGCGAGTGGATAAAAGGTGA+TGG | + | chr5_2:52871745-52871764 | None:intergenic | 45.0% | |
| ATTTAGGGAGATCTAGCGAG+TGG | + | chr5_2:52871759-52871778 | None:intergenic | 45.0% | |
| CTAGATCTCCCTAAATCTCC+TGG | - | chr5_2:52871763-52871782 | Msa0775760:intron | 45.0% | |
| ACCTTCCACCAGGAGATTTA+GGG | + | chr5_2:52871774-52871793 | None:intergenic | 45.0% | |
| AACCTTCCACCAGGAGATTT+AGG | + | chr5_2:52871775-52871794 | None:intergenic | 45.0% | |
| GAGTAAACAAACCTTCCACC+AGG | + | chr5_2:52871784-52871803 | None:intergenic | 45.0% | |
| !! | ACAGGATCGGTATTGATGAG+TGG | - | chr5_2:52872019-52872038 | Msa0775760:intron | 45.0% |
| TTCTCAATAGGTGACTGCAG+TGG | - | chr5_2:52872069-52872088 | Msa0775760:intron | 45.0% | |
| !!! | AGCTGGAAGTGTTGGTTTTC+CGG | + | chr5_2:52872109-52872128 | None:intergenic | 45.0% |
| TAAGTTACTTGGGCAAGAGC+TGG | + | chr5_2:52872126-52872145 | None:intergenic | 45.0% | |
| ! | GCTGCTTTCATAAGCTATCC+TGG | + | chr5_2:52872474-52872493 | None:intergenic | 45.0% |
| ! | TATTGCCACTTGAATTCCGC+AGG | - | chr5_2:52872629-52872648 | Msa0775760:intron | 45.0% |
| AAAGTAGGTGAAGCCAATGG+AGG | - | chr5_2:52872693-52872712 | Msa0775760:intron | 45.0% | |
| CAGTTTGTGTACAAGCACCT+TGG | - | chr5_2:52872753-52872772 | Msa0775760:intron | 45.0% | |
| GGCAACTGTTGGAAGTTACA+AGG | - | chr5_2:52872782-52872801 | Msa0775760:intron | 45.0% | |
| AGTAGACCTCAGACAGAACA+AGG | - | chr5_2:52872809-52872828 | Msa0775760:intron | 45.0% | |
| CTTATCTGTGCTCGACCTAA+AGG | - | chr5_2:52872913-52872932 | Msa0775760:intron | 45.0% | |
| ! | CGACCTAAAGGTCCTTTTGT+TGG | - | chr5_2:52872925-52872944 | Msa0775760:intron | 45.0% |
| GCACCAACAAAAGGACCTTT+AGG | + | chr5_2:52872931-52872950 | None:intergenic | 45.0% | |
| GCAAAAGGATTGTCTCTAGC+AGG | - | chr5_2:52873000-52873019 | Msa0775760:intron | 45.0% | |
| ! | TAACTCGTGTCATTAGCTGG+AGG | - | chr5_2:52873058-52873077 | Msa0775760:intron | 45.0% |
| GACAAGCAGCCCAACAAAGT+TGG | - | chr5_2:52867928-52867947 | Msa0775760:three_prime_UTR | 50.0% | |
| !! | ATGAAGGGTTGGTGGTGTTG+GGG | + | chr5_2:52868125-52868144 | None:intergenic | 50.0% |
| !! | GATGAAGGGTTGGTGGTGTT+GGG | + | chr5_2:52868126-52868145 | None:intergenic | 50.0% |
| !! | AGATGAAGGGTTGGTGGTGT+TGG | + | chr5_2:52868127-52868146 | None:intergenic | 50.0% |
| AGTGAGAGATGAAGGGTTGG+TGG | + | chr5_2:52868133-52868152 | None:intergenic | 50.0% | |
| !! | AGTTGAACCGGGTGTTGAAG+TGG | + | chr5_2:52868172-52868191 | None:intergenic | 50.0% |
| TGTATCCCCGCGTAATCACA+TGG | - | chr5_2:52868323-52868342 | Msa0775760:intron | 50.0% | |
| CTGTTGCTGAACCTGTTGCT+AGG | - | chr5_2:52868397-52868416 | Msa0775760:three_prime_UTR | 50.0% | |
| ! | GCAGGTTGAATCCTAGCAAC+AGG | + | chr5_2:52868411-52868430 | None:intergenic | 50.0% |
| CTTGGTTGGAGGGTCATTGT+TGG | - | chr5_2:52868836-52868855 | Msa0775760:CDS | 50.0% | |
| !! | TAAACCCCCAAGCATTGGTC+TGG | - | chr5_2:52869015-52869034 | Msa0775760:intron | 50.0% |
| ATCACCAGACCAATGCTTGG+GGG | + | chr5_2:52869022-52869041 | None:intergenic | 50.0% | |
| CATCACCAGACCAATGCTTG+GGG | + | chr5_2:52869023-52869042 | None:intergenic | 50.0% | |
| TCCCACCGTTAACTAACAGG+GGG | + | chr5_2:52869147-52869166 | None:intergenic | 50.0% | |
| !! | TAACGGTGGGATTAGTCCCA+CGG | - | chr5_2:52869156-52869175 | Msa0775760:intron | 50.0% |
| CAATTGGGGCTTTCAGTGTC+AGG | + | chr5_2:52869773-52869792 | None:intergenic | 50.0% | |
| GCACGACAGTACTACAGCTA+TGG | + | chr5_2:52870495-52870514 | None:intergenic | 50.0% | |
| GAACACAGACACTGGATCCT+TGG | - | chr5_2:52870769-52870788 | Msa0775760:CDS | 50.0% | |
| TGCGACGAATTTCCTGTGCA+TGG | + | chr5_2:52870902-52870921 | None:intergenic | 50.0% | |
| CATTGTGTAGTTGTCGGAGG+TGG | - | chr5_2:52871070-52871089 | Msa0775760:intron | 50.0% | |
| ! | CTTCCTTTGATGACCGACTC+AGG | - | chr5_2:52871447-52871466 | Msa0775760:intron | 50.0% |
| TGCCACCAACCAGTTGACAA+AGG | - | chr5_2:52871475-52871494 | Msa0775760:intron | 50.0% | |
| CACCTTTGTCAACTGGTTGG+TGG | + | chr5_2:52871480-52871499 | None:intergenic | 50.0% | |
| GCTCACCTTTGTCAACTGGT+TGG | + | chr5_2:52871483-52871502 | None:intergenic | 50.0% | |
| ! | TTCCTTACGGGTTGCTGGTT+TGG | - | chr5_2:52871704-52871723 | Msa0775760:intron | 50.0% |
| !! | CTGGTTTGGTCTACTGGAGT+TGG | - | chr5_2:52871718-52871737 | Msa0775760:intron | 50.0% |
| GATCTCCCTAAATCTCCTGG+TGG | - | chr5_2:52871766-52871785 | Msa0775760:intron | 50.0% | |
| TCCCTAAATCTCCTGGTGGA+AGG | - | chr5_2:52871770-52871789 | Msa0775760:intron | 50.0% | |
| TGCTACCTGCGGAATTCAAG+TGG | + | chr5_2:52872637-52872656 | None:intergenic | 50.0% | |
| GTACAAGCACCTTGGAAGCA+TGG | - | chr5_2:52872761-52872780 | Msa0775760:intron | 50.0% | |
| CAACAGTTGCCATGCTTCCA+AGG | + | chr5_2:52872773-52872792 | None:intergenic | 50.0% | |
| ! | CTTGGAAGCATGGCAACTGT+TGG | - | chr5_2:52872771-52872790 | Msa0775760:intron | 50.0% |
| CTCTAGCAGGTTTCCTCAGT+TGG | - | chr5_2:52873013-52873032 | Msa0775760:intron | 50.0% | |
| AGCGCCAAACAAACCAACTG+AGG | + | chr5_2:52873029-52873048 | None:intergenic | 50.0% | |
| !! | CAGTTGGTTTGTTTGGCGCT+CGG | - | chr5_2:52873029-52873048 | Msa0775760:intron | 50.0% |
| !! | TGAAGGGTTGGTGGTGTTGG+GGG | + | chr5_2:52868124-52868143 | None:intergenic | 55.0% |
| CGCTTCTCCACTTCAACACC+CGG | - | chr5_2:52868162-52868181 | Msa0775760:intron | 55.0% | |
| AACACCCGGTTCAACTGCTC+CGG | - | chr5_2:52868176-52868195 | Msa0775760:three_prime_UTR | 55.0% | |
| ! | AACTGCTCCGGTTCGCTATG+CGG | - | chr5_2:52868188-52868207 | Msa0775760:three_prime_UTR | 55.0% |
| !! | GGCTTCTCGTGTGGTTTGGT+TGG | + | chr5_2:52868222-52868241 | None:intergenic | 55.0% |
| GCCGGATGCAGGTTCATGAA+AGG | - | chr5_2:52868270-52868289 | Msa0775760:three_prime_UTR | 55.0% | |
| ACCCCCCTGTTAGTTAACGG+TGG | - | chr5_2:52869142-52869161 | Msa0775760:intron | 55.0% | |
| CCCACCGTTAACTAACAGGG+GGG | + | chr5_2:52869146-52869165 | None:intergenic | 55.0% | |
| CCCCCCTGTTAGTTAACGGT+GGG | - | chr5_2:52869143-52869162 | Msa0775760:intron | 55.0% | |
| ! | GGAGCACAACCCACCACTTT+TGG | - | chr5_2:52870831-52870850 | Msa0775760:CDS | 55.0% |
| GGATGCAGGGATTTCGGAAG+AGG | - | chr5_2:52871030-52871049 | Msa0775760:intron | 55.0% | |
| AGTTGTCGGAGGTGGTCCTA+CGG | - | chr5_2:52871078-52871097 | Msa0775760:intron | 55.0% | |
| GTGCCTGAGTCGGTCATCAA+AGG | + | chr5_2:52871453-52871472 | None:intergenic | 55.0% | |
| TGGTGGCATAGTGCCTGAGT+CGG | + | chr5_2:52871463-52871482 | None:intergenic | 55.0% | |
| ! | TCAGGAGTGCGACTTGTTCG+AGG | - | chr5_2:52871628-52871647 | Msa0775760:intron | 55.0% |
| ! | TGAGGTTCCTTACGGGTTGC+TGG | - | chr5_2:52871699-52871718 | Msa0775760:intron | 55.0% |
| GACCAAACCAGCAACCCGTA+AGG | + | chr5_2:52871709-52871728 | None:intergenic | 55.0% | |
| !! | GGGTTGCTGGTTTGGTCTAC+TGG | - | chr5_2:52871712-52871731 | Msa0775760:intron | 55.0% |
| ! | TGGGCAAGAGCTGGAAGTGT+TGG | + | chr5_2:52872117-52872136 | None:intergenic | 55.0% |
| GAATTCCGCAGGTAGCAGAG+AGG | - | chr5_2:52872640-52872659 | Msa0775760:intron | 55.0% | |
| !! | GAAGGGTTGGTGGTGTTGGG+GGG | + | chr5_2:52868123-52868142 | None:intergenic | 60.0% |
| CGAACCGGAGCAGTTGAACC+GGG | + | chr5_2:52868183-52868202 | None:intergenic | 60.0% | |
| GCGAACCGGAGCAGTTGAAC+CGG | + | chr5_2:52868184-52868203 | None:intergenic | 60.0% | |
| GCGTGGCTTCTCGTGTGGTT+TGG | + | chr5_2:52868226-52868245 | None:intergenic | 60.0% | |
| AAGCCACGCGTGGTGGTTCT+CGG | - | chr5_2:52868237-52868256 | Msa0775760:three_prime_UTR | 60.0% | |
| GTTGTCGGAGGTGGTCCTAC+GGG | - | chr5_2:52871079-52871098 | Msa0775760:intron | 60.0% | |
| CCTTGCCTCTCTGCTACCTG+CGG | + | chr5_2:52872648-52872667 | None:intergenic | 60.0% | |
| GCTGTTTGCACGGCCTCCAT+TGG | + | chr5_2:52872709-52872728 | None:intergenic | 60.0% | |
| CCGAGAGCCGCATAGCGAAC+CGG | + | chr5_2:52868198-52868217 | None:intergenic | 65.0% | |
| ! | CCGGTTCGCTATGCGGCTCT+CGG | - | chr5_2:52868195-52868214 | Msa0775760:three_prime_UTR | 65.0% |
| ACCACACGAGAAGCCACGCG+TGG | - | chr5_2:52868227-52868246 | Msa0775760:three_prime_UTR | 65.0% | |
| ACCACGCGTGGCTTCTCGTG+TGG | + | chr5_2:52868231-52868250 | None:intergenic | 65.0% | |
| ACACGAGAAGCCACGCGTGG+TGG | - | chr5_2:52868230-52868249 | Msa0775760:three_prime_UTR | 65.0% | |
| !! | TGGTGGTTCTCGGCACCGGT+TGG | - | chr5_2:52868247-52868266 | Msa0775760:three_prime_UTR | 65.0% |
| !! | GGTGGTTCTCGGCACCGGTT+GGG | - | chr5_2:52868248-52868267 | Msa0775760:three_prime_UTR | 65.0% |
| GAACCTGCATCCGGCCCAAC+CGG | + | chr5_2:52868265-52868284 | None:intergenic | 65.0% | |
| CCGCAGGTAGCAGAGAGGCA+AGG | - | chr5_2:52872645-52872664 | Msa0775760:intron | 65.0% | |
| GTGCCGAGAACCACCACGCG+TGG | + | chr5_2:52868243-52868262 | None:intergenic | 70.0% | |
| CGCGTGGTGGTTCTCGGCAC+CGG | - | chr5_2:52868243-52868262 | Msa0775760:three_prime_UTR | 70.0% | |
| !! | GTTCTCGGCACCGGTTGGGC+CGG | - | chr5_2:52868252-52868271 | Msa0775760:three_prime_UTR | 70.0% |
| !! | GCACCGGTTGGGCCGGATGC+AGG | - | chr5_2:52868259-52868278 | Msa0775760:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 52867909 | 52873686 | 52867909 | ID=Msa0775760;Name=Msa0775760 |
| chr5_2 | mRNA | 52867909 | 52873686 | 52867909 | ID=Msa0775760-mRNA-1;Parent=Msa0775760;Name=Msa0775760-mRNA-1;_AED=0.09;_eAED=0.09;_QI=151|1|1|1|0.77|0.7|10|412|497 |
| chr5_2 | exon | 52867909 | 52868138 | 52867909 | ID=Msa0775760-mRNA-1:exon:15794;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52868175 | 52868300 | 52868175 | ID=Msa0775760-mRNA-1:exon:15793;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52868390 | 52868598 | 52868390 | ID=Msa0775760-mRNA-1:exon:15792;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52868765 | 52868944 | 52868765 | ID=Msa0775760-mRNA-1:exon:15791;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52869458 | 52869572 | 52869458 | ID=Msa0775760-mRNA-1:exon:15790;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52869804 | 52869967 | 52869804 | ID=Msa0775760-mRNA-1:exon:15789;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52870099 | 52870164 | 52870099 | ID=Msa0775760-mRNA-1:exon:15788;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52870397 | 52870557 | 52870397 | ID=Msa0775760-mRNA-1:exon:15787;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52870638 | 52870851 | 52870638 | ID=Msa0775760-mRNA-1:exon:15786;Parent=Msa0775760-mRNA-1 |
| chr5_2 | exon | 52873095 | 52873686 | 52873095 | ID=Msa0775760-mRNA-1:exon:15785;Parent=Msa0775760-mRNA-1 |
| chr5_2 | five_prime_UTR | 52873536 | 52873686 | 52873536 | ID=Msa0775760-mRNA-1:five_prime_utr;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52873095 | 52873535 | 52873095 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52870638 | 52870851 | 52870638 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52870397 | 52870557 | 52870397 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52870099 | 52870164 | 52870099 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52869804 | 52869967 | 52869804 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52869458 | 52869572 | 52869458 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52868765 | 52868944 | 52868765 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | CDS | 52868446 | 52868598 | 52868446 | ID=Msa0775760-mRNA-1:cds;Parent=Msa0775760-mRNA-1 |
| chr5_2 | three_prime_UTR | 52868390 | 52868445 | 52868390 | ID=Msa0775760-mRNA-1:three_prime_utr;Parent=Msa0775760-mRNA-1 |
| chr5_2 | three_prime_UTR | 52868175 | 52868300 | 52868175 | ID=Msa0775760-mRNA-1:three_prime_utr;Parent=Msa0775760-mRNA-1 |
| chr5_2 | three_prime_UTR | 52867909 | 52868138 | 52867909 | ID=Msa0775760-mRNA-1:three_prime_utr;Parent=Msa0775760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
